mRNA_P-wetherbeei_contig1853.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1853.2.1
Unique NamemRNA_P-wetherbeei_contig1853.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1853.2.1 vs. uniprot
Match: D7G7V2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7V2_ECTSI)

HSP 1 Score: 303 bits (775), Expect = 5.040e-90
Identity = 212/529 (40.08%), Postives = 270/529 (51.04%), Query Frame = 2
Query:   71 SLVGIVTTVRLTP-KGESLDSTSLQRSEARRWSVLEAFLLYHLDKGFDRIYLFFDAADGSDEAYVRRVEEEPSFL-GRVEITRAGAEHDEAVRESCSLWPSLALFYETEVQARQSLNAELAIQRAEAEGLRWLLHIDADELFWTPEPSVKPHFAALEAQGVEQMTYANHEGVPERDGVDNYFAEVTLFRRHHLCLPISHEASAAMRWWCARTGHGQYMIAYDCGKSAARVAPG-VVPDGVHTWRC-----GNGXXXXXXXXXXXTVVPAAADVEEGKMEDDKVSGGEAKGTG-RNGTMPGSSSGGSCNNKXXXXXXXXXXXXSTRGFGIAENGLKSQNMAPSSGRRRCRTALADPRNLRPAEIVCLEHPCVLHYLSCGLMWLRDKYAVLGAFKDAWFGGRLPIAPCFHRDARDALAAAATPAVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGDCGAVDNDGWSRDAIADPIATLFRSQVLLCPRRDEKELERQLRSGVCERNRGPAEAIAAGRRARG 1630
            S VG+VTT R  P         ++ R E R WS LE+FLL+HL KG + ++L+ DA DGS+  Y+ RV    SF   +V I        +  ++ C LW  L  F  TEV ARQSLNAE A+QRA   GL WLLH+D DELF+T EPSV+PHF  L   GVEQMTYANHE VP R+ V +YF EV+ F+ +HL LP+SHE +   R+W  RT HGQYM+AYD GKSA RV P  VVP  VH WR                    T   +   V+  K+ED     GE  G G    +  GS+   +C +     XXXXXXXX       + +G    ++         R A+ADPR LR  E++    PCVLHY SCGL WLRDKY +LG+F  +WF G+LPIAPCFH DAR+A+                                                G C + + DG            L+R +V+LCP+   +E++ QL  GV      PA  +   R  RG
Sbjct:   80 SRVGLVTTFRFVPFVPHDGGQEAIDRFE-RCWSTLESFLLFHLAKGIEHVFLYADANDGSNAPYIERVA--ASFNPSQVSIDVRNEPQRKRQQDRCRLWGELGSFSATEVPARQSLNAEDALQRASTMGLDWLLHLDIDELFFTSEPSVRPHFDRLNELGVEQMTYANHEAVPLREEVTDYFREVSTFKVNHLLLPLSHEVAERTRFWRRRTNHGQYMLAYDNGKSAVRVLPDRVVPQSVHRWRTLKPGERGARCSSNAAGEEETDDKSFLPVDGHKLEDP----GEGTGEGVAAASTTGSAGDETCGDWLQTQXXXXXXXXXXXXXSPSLSGSGPDHLVN-------RVAMADPRELRFDEVLECNDPCVLHYPSCGLDWLRDKYRLLGSFPSSWFDGKLPIAPCFHLDARNAVHQG----------------------------------HGTRGSLGEGGGVCDSAERDGGR---------ALYRKEVMLCPKEHSEEMQAQLEHGVLRILGEPASVVEQARHVRG 551          
BLAST of mRNA_P-wetherbeei_contig1853.2.1 vs. uniprot
Match: A0A835YS67_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS67_9STRA)

HSP 1 Score: 233 bits (594), Expect = 2.710e-65
Identity = 143/317 (45.11%), Postives = 164/317 (51.74%), Query Frame = 2
Query:  353 SLWPSLALFYETEVQARQSLNAELAIQRAEAEGLRWLLHIDADELFWTPEPSVKPHFAALEAQGVEQMTYANHEGVPE---RDGVDNYFAEVTLFRRHHLCLPISHEASAAMRWWCARTGHGQYMIAYDCGKSAARVAPGVVPDGVHTWRCGNGXXXXXXXXXXXTVVPAAADVEEGKMEDDKVSGGEAKGTGRNGTMPGSSSGGSCNNKXXXXXXXXXXXXSTRGFGIAENGLKSQNMAPSSGRRRCRTALADPRNLRPAEIVCL-EH-PCVLHYLSCGLMWLRDKYAVLGAFKDAWFGGRLPIAPCFHRDARDAL 1288
            SLWP       TEVQARQ+LNAELA+Q A   GL WLLHID DELFWTP+ S++ HFA L    V QMTY NHEGVPE   RD  D  F  VTLF+RH + LP+S +A  AM WW  RT HGQYM+ YDCGKS  RV  G +P  VH WR                 +P                            +P  SS GS                                 AP S     RTALADPRN+     + L EH PC+LHY++CG  W RDKYA+L  F DAWFGG+LPIAP FH D+RD L
Sbjct:   14 SLWPPPRSERSTEVQARQTLNAELALQLAARAGLHWLLHIDIDELFWTPDDSIQSHFAMLRRCDVYQMTYTNHEGVPEAPLRDYAD-CFTAVTLFKRHFMSLPLSGDARGAMDWWRRRTYHGQYMLGYDCGKSVVRVGCGALPRNVHAWR-----------------LPPP--------------------------LPSDSSSGS---------------------------------APRS-----RTALADPRNMDMGAYLPLPEHCPCILHYINCGWGWYRDKYALLARFGDAWFGGKLPIAPSFHLDSRDVL 248          
BLAST of mRNA_P-wetherbeei_contig1853.2.1 vs. uniprot
Match: A0A7S2SWB6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SWB6_9STRA)

HSP 1 Score: 228 bits (581), Expect = 4.760e-64
Identity = 147/394 (37.31%), Postives = 191/394 (48.48%), Query Frame = 2
Query:  170 LEAFLLYHLDK-GFDRIYLFFDAADGS-DE---------------AYVRRVEEEPSFLGRVEITRAGAEHD--EAVRESCSLWPSLALFYETEVQARQSLNAELAIQRAEAEGLRWLLHIDADELFWTPEPS-VKPHFAALEAQGVEQMTYANHEGVPERDGVDNYFAEVTLFRRHHLCLPISHEASAAMRWWCARTGHGQYMIAYDCGKSAARVAPGVVPDGVHTWRCGNGXXXXXXXXXXXTVVPAAADVEEGKMEDDKVSGGEAKGTGRNGTMPGSSSGGSCNNKXXXXXXXXXXXXSTRGFGIAENGLKSQNMAPSSGRRRCRTALADPRNLRPAEIVCLEHPCVLHYLSCGLMWLRDKYAVLGAFKDAWFGGRLPIAPCFHRDARDALA 1291
            L+++  +HL   GF  ++LFFD  + + DE               A   R E  PS L  +    AG +    +  R++C+ W +L  F + EVQARQSLNAE A   A   G+ WLLH+D+DELF+  E   V+ HF  L+ +G++Q+TY NHE VPER+ V ++F EVTLFRRHH  +P+  +A A MR+W  RT HGQYM+ YD GKSAARV        VH WR                                                                                           ++  R C TALADPR +  A +    +PC+LHY++CGL WLRDKY +LG F DAWFGG+LPIAP FH DARDALA
Sbjct:   31 LQSWCRWHLQGVGFRHLFLFFDHGESAVDEGSGVPLLVPDSTHPTAVALRQEFPPSSLSVL----AGKDGRLRQWQRDNCASWETLEGFVQDEVQARQSLNAETAAHLARDMGIAWLLHMDSDELFYCGEGGKVEDHFRDLDREGIDQLTYLNHEAVPEREDVGDFFQEVTLFRRHHFTVPLRPQAQACMRFWERRTNHGQYMLVYDNGKSAARVHAIAGVQSVHHWRL------------------------------------------------------------------------------------------ATDARSC-TALADPRKMDLANLRKTNYPCILHYVTCGLSWLRDKYGILGEFPDAWFGGKLPIAPSFHLDARDALA 329          
BLAST of mRNA_P-wetherbeei_contig1853.2.1 vs. uniprot
Match: A0A0G4G3M5_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4G3M5_VITBC)

HSP 1 Score: 186 bits (471), Expect = 1.300e-48
Identity = 104/207 (50.24%), Postives = 121/207 (58.45%), Query Frame = 2
Query:  170 LEAFLLYHLDKGFDRIYLFFDAADGSDEAYVRRVEEEPSFLGRVEITRAGAEHDEAVRESCSLWPSLALFYETEVQARQSLNAELAIQRAEAEGLRWLLHIDADELFWTPEPSVKPHFAALEAQGVEQMTYANHEGVPERDGVDNYFAEVTLFRRHHLCLPISHEASAAMRWWCARTGHGQYMIAYDCGKSAARVAPGVVPDGVHTW 790
            L +F+ YHL K F +IYLF D  D  D A  R V  +    G     R      + + E C L+  L   + TEV ARQ LNA  A   A A+G+ WLLHID+DELF+T EPSVKPHF AL   G  QMTYANHEGVP      +YFA V+LFR H   +P +HEA  AM WW  R G GQY   YD GKSAARV PG+    VH W
Sbjct:   18 LRSFIRYHLAKEFAKIYLFID--DPHDWA-AREVARQCQCDGLRVFERGEQLERDIMAECCDLFSRLKDIHHTEVVARQMLNASYAAVVASADGMDWLLHIDSDELFYTEEPSVKPHFQALTGNGYHQMTYANHEGVPTSIDCQDYFAAVSLFRTHPSHVPFTHEARRAMHWWVERLGRGQYFAFYDNGKSAARVVPGLRARDVHRW 221          
BLAST of mRNA_P-wetherbeei_contig1853.2.1 vs. uniprot
Match: A0A6G0X5T9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X5T9_9STRA)

HSP 1 Score: 182 bits (461), Expect = 2.940e-47
Identity = 130/416 (31.25%), Postives = 175/416 (42.07%), Query Frame = 2
Query:   74 LVGIVTTVRLTPKGESLDSTSLQRSEARRWSVLEAFLLYHLDKGFDRIYLFFDAADGS-DEAYVRRVEEEPSFLGRVEITRAGAEHDEAVRESCSLWPSLALFYETEVQARQSLNAELAIQRA-------EAEGLRWLLHIDADELFWTPEPSVKPHFAALEAQGVEQMTYANHEGVPERDGVDNYFAEVTLFRRHHLCLPISHEASAAMRWWCARTGHGQYMIAYDCGKSAARVAPGVVPDGVHTWRCGNGXXXXXXXXXXXTVVPAAADVEEGKMEDDKVSGGEAKGTGRNGTMPGSSSGGSCNNKXXXXXXXXXXXXSTRGFGIAENGLKSQNMAPSSGRRRCRTALADPRNLRPAEIVC-LEHPCVLHYLSCGLMWLRDKYAVLGAFKDAWFGGRLPIAPCFHRDARDALAA 1294
            ++ +VTTV + P            S +R   VL +FLLYHL  GF+RI++F D    S  +     +E     +   ++        +    SC L+ SL      EVQARQ LN ELA+           +E L WL+H+D DEL +    S++  FA+L A  V+Q T+ NHE VP    + NYF E T F+ +HL  P +  A A+M  W  RT + QYM+AYD GKSA R+  G+ P  VH WR                                                                                       N++         T  ADPR+L   +++     P VLHY +CG  W + KY +LG F DAWFGG+LPI PCFH  AR   AA
Sbjct:    1 MLALVTTVAVDP------------STSREMQVLCSFLLYHLSVGFERIFVFLDRPSCSIAQVKAALMEAAKGTMLDDQVVFVDRASSDVQHPSCQLYSSLMPCLPNEVQARQQLNCELAMNACLNWNDDHPSERLEWLVHLDLDELLYFRN-SLREFFASLNAASVDQFTFVNHEAVPTSCEISNYFVEATHFKVNHLVAPFTPAALASMNRWKTRTTYRQYMLAYDNGKSAVRIRRGITPASVHQWR---------------------------------------------------------------------------------------NVSTW-------TNFADPRHLALGQVMPHSSSPWVLHYPNCGYEWFKAKYTLLGPFPDAWFGGKLPIEPCFHTTARGTWAA 309          
BLAST of mRNA_P-wetherbeei_contig1853.2.1 vs. uniprot
Match: A0A7S4ECQ6_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4ECQ6_9STRA)

HSP 1 Score: 175 bits (444), Expect = 6.120e-45
Identity = 104/240 (43.33%), Postives = 140/240 (58.33%), Query Frame = 2
Query:   77 VGIVTTVRLTPKGESLDSTSLQRSEARRWSVLEAFLLYHLDKGFDRIYLFFDAADGSDEAYVRRVEEEPSFLGRVEITRAGAEHDEAVRESCSLWPSLALFYETEVQARQSLNAELAIQRAEAEGLRWLLHIDADELFWTP-EPSVKPHFAALEAQGVEQMTYANHEGVPERDGVDNYFAEVTLFRRHHLCLPISHEASAAMRWWCARTGHGQYMIAYDCGKSAARVAPGVVPDGVHTWR 793
            V +VTT+ L PKG S              SVL +F+ +H   G D +YL+FD +  SDE    R  ++P  + RV   R   +  E  +E C+ W      Y TEVQARQ+LNAE A  +A  +G  WLLH+D DELF+   + ++  HF  L+A+ +   TYANHEGV ER  V +YF EVTLFR +H  LP++    A MRWW +R+ HGQY++ YDCGKSA ++   + P  VH WR
Sbjct:   48 VALVTTLLL-PKGSS--------------SVLASFVKWHTSLGIDTLYLYFDDST-SDEPEGWREADDPQVV-RV---RRSPQLLEEQQEKCACWARFGP-YATEVQARQALNAEHASLQARRDGCTWLLHLDVDELFFVKSKEALLTHFRDLDAKDIGHCTYANHEGVAERSDVRDYFREVTLFRWNHHSLPLTSGVQAGMRWWRSRSKHGQYLLCYDCGKSAVKLVDDIEPVSVHAWR 266          
BLAST of mRNA_P-wetherbeei_contig1853.2.1 vs. uniprot
Match: A0A1Q9C9W9_SYMMI (Oxidized purine nucleoside triphosphate hydrolase n=5 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9C9W9_SYMMI)

HSP 1 Score: 171 bits (434), Expect = 2.810e-42
Identity = 99/252 (39.29%), Postives = 143/252 (56.75%), Query Frame = 2
Query:   38 PLVPAMVPSNESLVGIVTTVRLTPKGESLDSTSLQRSEARRWSVLEAFLLYHLDKGFDRIYLFFDAADGSDEAYVRRVEEEPSFLGRVEITRAGAEHDEAVRESCSLWPSLALFYETEVQARQSLNAELAIQRAEAEGLRWLLHIDADELFWTPEPSVKPHFAALEAQGVEQMTYANHEGVPERDGVDNYFAEVTLFRRHHLCLPISHEASAAMRWWCARTGHGQYMIAYDCGKSAARVAPGVVPDGVHTWR 793
            PLVPA VP              +  G +L  +++   +A     LE+F+ YHL KGF R+ +F D  D SD A +  V   P+   RV     G +  +A R+ C+ +  LA F + EV ARQ ++ E A   A +   RW+L +D+DELF+T E S+ PHF  LE+Q + QM+Y NHEGVPE+    +YFA V+LF++H   +P++ +A + +R+W  R+ HGQY + YD GKSA R   G  P   H W+
Sbjct:  171 PLVPASVPRFGQ----------SEPGAALLVSTVSFVDAPNARPLESFIRYHLRKGFARVMIFVD--DPSDTATLDVVRRFPT--SRVLYRVRGEDLLQAQRQHCASFKKLAGFIDKEVSARQLIDFEFASTLAPSLACRWILCLDSDELFYTSEDSIVPHFQMLESQDIHQMSYLNHEGVPEQPETQDYFATVSLFKQHQFAVPLTAKARSGLRFWMDRSKHGQYFLFYDNGKSACRTGFGATPSSQHLWQ 408          
BLAST of mRNA_P-wetherbeei_contig1853.2.1 vs. uniprot
Match: A0A812V5V9_SYMPI (Oxidized purine nucleoside triphosphate hydrolase n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812V5V9_SYMPI)

HSP 1 Score: 169 bits (429), Expect = 2.320e-40
Identity = 91/209 (43.54%), Postives = 131/209 (62.68%), Query Frame = 2
Query:  170 LEAFLLYHLDKGFDRIYLFFDAADGSDEAYVRRVEEEPSFLGRVEITRAGAEHDEAVRESCSLWPSLALFYETEVQARQSLNAELAIQRAEAEGLRWLLHIDADELFWTPEPSVKPHFAALEAQGVEQMTYANHEGVPERDGVDNYFAEVTLFRRHHLCLPISHEASAAMRWWCARTGHGQYMIAYDCGKSAARVAPGV-VPDGVHTWR 793
            LE+F+ YHL KGF R+ +F D+   +D A +  +   P+   RV     G E  +A RE+C+ +  LA F + EV ARQ L+ E A   A + G RW+L +D+DELF+T E S+ PHF ALE  G++QM+Y NHE VPE+    +YFA V+LF++H   +P++ +A + +R+W  R+ HGQY + YD GKSA R   GV +P   H W+
Sbjct:  205 LESFIRYHLRKGFARVMIFVDSP--ADTAVLDVIRRFPA--SRVLHHVRGEELLQAQRENCASFNKLASFVDKEVSARQLLDFEFASTLAPSLGCRWILCLDSDELFYTDEDSIVPHFEALELNGIDQMSYLNHEAVPEKPETPDYFATVSLFKQHQFSVPLTAKARSGLRFWMERSRHGQYFLFYDNGKSACRTGLGVTIPKNQHLWQ 409          
BLAST of mRNA_P-wetherbeei_contig1853.2.1 vs. uniprot
Match: A0A813KVX5_POLGL (Oxidized purine nucleoside triphosphate hydrolase n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813KVX5_POLGL)

HSP 1 Score: 165 bits (418), Expect = 3.930e-40
Identity = 93/228 (40.79%), Postives = 131/228 (57.46%), Query Frame = 2
Query:  122 LDSTSLQRSEARRWSVLEAFLLYHLDKGFDRIYLFFDAADGSDEAYVRRVEEEPSFLGRVEITRAGAEHDEAVRESCSLWPSLALFYETEVQARQSLNAELAIQRAEAEGLRWLLHIDADELFWTPEPSVKPHFAALEAQGVEQMTYANHEGVPERDGVDNYFAEVTLFRRHHLCLPISHEASAAMRWWCARTGHGQYMIAYDCGKSAARVAPGVVPDGVHTWRCGNG 805
            + + S +++       LE+F+ +HL KGF R+ +F D+A+  D A +  V   P    RV     G E     +  C  + +LA F ++EV ARQ L+AE A+  A A G  WL+ +D+DE F+T E SV PHF AL A+GV QMTY NHEGVPE     +YFA  TLF+RHH  +P+S +A   +R+W  R+   QY++ +D GKSA R      P   H W+  +G
Sbjct:  186 VSTVSFRKAPGGSARPLESFIRFHLLKGFARVLIFVDSAE--DVAVLDVVRRFPR--SRVLFRVRGPELLAEQKSRCPSFSALAPFMDSEVSARQLLDAEYAMDAAPALGCFWLVCLDSDEFFFTSEASVVPHFEALAAEGVSQMTYLNHEGVPELVETPDYFATTTLFKRHHFAVPLSSQARGCLRFWMDRSKRSQYLLFFDNGKSACRTGCAAKPKSQHLWQLPSG 409          
BLAST of mRNA_P-wetherbeei_contig1853.2.1 vs. uniprot
Match: A0A812V547_9DINO (Oxidized purine nucleoside triphosphate hydrolase n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812V547_9DINO)

HSP 1 Score: 157 bits (397), Expect = 2.610e-37
Identity = 99/257 (38.52%), Postives = 145/257 (56.42%), Query Frame = 2
Query:   35 KPLVPAMVPSNESLVGIVTTVRLTPKGESLDSTSLQRSEARRWSVLEAFLLYHLDKGFDRIYLFFDAADGSDEAYVRRVEEEPSFLGRVEITRAGAEHDEAVRESCSLWPSLALFYETEVQARQSLNAELAIQRAEAEGLRWLLHIDADELFWTPEPSVKPHFAALEAQGVEQMTYANHEGVPERDGVDNYFAEVTLFRRHHLCLPISHEASAAMRWWCARTGHGQYMIAYDCGKSAARVAPGVVPDGVHTWRCGNG 805
            +PL+PA VP       +  + ++ P G +L  +++    A     LE+F+ YHL KGF R+ +F D  D +D A +  V   P+   RV     G E     R+ CS +  L  F + EV ARQ L+ ELA + A + G  W+L +D+DEL +T E SV PH  +LE+QG+ QM+Y NHE VPE+    +YFA V+LF+ H   +P++ +A + +R+W  R+ HGQY + YD GKSA R      P   H W+  +G
Sbjct:  170 RPLLPASVPR------MGPSAQIEP-GAALLVSTVSFIGAPSARPLESFIRYHLLKGFARVMIFVD--DPADSATLDAVRRFPA--SRVLYRVRGEELWREQRQHCSSFDKLEGFVD-EVSARQLLDFELASKLAPSLGCGWILCLDSDELLYTREESVVPHLQSLESQGIYQMSYLNHEAVPEQPETLDYFATVSLFKLHQFAVPLTAKARSGLRFWMNRSKHGQYFLFYDNGKSACRTGLAATPASQHLWQLPSG 414          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1853.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7V2_ECTSI5.040e-9040.08Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YS67_9STRA2.710e-6545.11Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2SWB6_9STRA4.760e-6437.31Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A0G4G3M5_VITBC1.300e-4850.24Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A6G0X5T9_9STRA2.940e-4731.25Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A7S4ECQ6_9STRA6.120e-4543.33Hypothetical protein (Fragment) n=2 Tax=Pelagomona... [more]
A0A1Q9C9W9_SYMMI2.810e-4239.29Oxidized purine nucleoside triphosphate hydrolase ... [more]
A0A812V5V9_SYMPI2.320e-4043.54Oxidized purine nucleoside triphosphate hydrolase ... [more]
A0A813KVX5_POLGL3.930e-4040.79Oxidized purine nucleoside triphosphate hydrolase ... [more]
A0A812V547_9DINO2.610e-3738.52Oxidized purine nucleoside triphosphate hydrolase ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1853contigP-wetherbeei_contig1853:2128..4374 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G7V2
PFAMsGlyco_tranf_2_4
Model size2013
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue3.91e-91
EggNOG OGs2CMCT@1|root,2QPZC@2759|Eukaryota
Descriptioncell wall organization
Cds size1923
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186148.592684-UTR-P-wetherbeei_contig1853:2127..22011683186148.592684-UTR-P-wetherbeei_contig1853:2127..2201Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1853 2128..2201 -
1683186148.6189055-UTR-P-wetherbeei_contig1853:4358..43741683186148.6189055-UTR-P-wetherbeei_contig1853:4358..4374Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1853 4359..4374 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186148.6040537-CDS-P-wetherbeei_contig1853:2201..26271683186148.6040537-CDS-P-wetherbeei_contig1853:2201..2627Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1853 2202..2627 -
1683186148.6115255-CDS-P-wetherbeei_contig1853:2861..43581683186148.6115255-CDS-P-wetherbeei_contig1853:2861..4358Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1853 2862..4358 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1853.2.1prot_P-wetherbeei_contig1853.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1853 2202..4358 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1853.2.1

>prot_P-wetherbeei_contig1853.2.1 ID=prot_P-wetherbeei_contig1853.2.1|Name=mRNA_P-wetherbeei_contig1853.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=641bp
MGGFKNKPLVPAMVPSNESLVGIVTTVRLTPKGESLDSTSLQRSEARRWS
VLEAFLLYHLDKGFDRIYLFFDAADGSDEAYVRRVEEEPSFLGRVEITRA
GAEHDEAVRESCSLWPSLALFYETEVQARQSLNAELAIQRAEAEGLRWLL
HIDADELFWTPEPSVKPHFAALEAQGVEQMTYANHEGVPERDGVDNYFAE
VTLFRRHHLCLPISHEASAAMRWWCARTGHGQYMIAYDCGKSAARVAPGV
VPDGVHTWRCGNGGGGGGDSAKVVTVVPAAADVEEGKMEDDKVSGGEAKG
TGRNGTMPGSSSGGSCNNKGGSCSNGGGSNSSTRGFGIAENGLKSQNMAP
SSGRRRCRTALADPRNLRPAEIVCLEHPCVLHYLSCGLMWLRDKYAVLGA
FKDAWFGGRLPIAPCFHRDARDALAAAATPAVVTTAAAVGTAATTSVEVV
GRAAAAPAGENGAAGSSGGGGSGDCGAVDNDGWSRDAIADPIATLFRSQV
LLCPRRDEKELERQLRSGVCERNRGPAEAIAAGRRARGIAAVTATVTTTG
HSEGCDAAPADAVGATFGTAAASATAQRVAAGGAARPVSRSRGAVVVNGG
SGGVKASASGDAAPAGDASEAGPCGYEKAWMLGNIARIYL*
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mRNA from alignment at P-wetherbeei_contig1853:2128..4374-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1853.2.1 ID=mRNA_P-wetherbeei_contig1853.2.1|Name=mRNA_P-wetherbeei_contig1853.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2247bp|location=Sequence derived from alignment at P-wetherbeei_contig1853:2128..4374- (Phaeothamnion wetherbeei SAG_119_79)
GGCGGAGCTATTCTGGATGGGGGGATTTAAAAATAAGCCTTTGGTCCCAG CGATGGTGCCCTCCAACGAATCTCTCGTCGGCATCGTTACTACAGTCCGT TTGACTCCGAAAGGCGAGAGTCTCGATTCGACGAGCCTCCAACGCTCAGA AGCGCGGCGGTGGTCCGTGCTCGAAGCGTTTCTGCTCTATCACTTGGACA AGGGATTCGATCGTATCTATCTGTTCTTTGACGCCGCCGACGGCAGCGAC GAAGCGTACGTTCGACGAGTGGAAGAGGAACCCTCGTTTCTCGGCCGTGT AGAAATTACTCGCGCCGGCGCGGAGCACGACGAAGCGGTGCGCGAAAGTT GCTCGCTCTGGCCGTCCCTGGCTCTCTTTTACGAGACGGAGGTGCAGGCG CGGCAATCGCTAAACGCAGAGTTGGCCATCCAGCGTGCGGAAGCGGAAGG CCTCCGCTGGCTCCTCCACATTGACGCCGACGAGCTGTTCTGGACACCCG AGCCCAGCGTCAAGCCGCACTTCGCGGCCCTGGAGGCCCAAGGCGTCGAA CAGATGACCTACGCCAACCACGAGGGCGTGCCGGAGCGAGACGGCGTCGA CAACTACTTTGCCGAAGTGACGCTCTTCCGCCGCCATCACCTCTGCCTGC CGATATCGCACGAGGCGAGCGCCGCCATGCGCTGGTGGTGCGCCCGCACG GGCCACGGCCAGTACATGATTGCCTATGACTGCGGCAAGTCAGCGGCGCG TGTCGCGCCGGGAGTCGTCCCTGATGGCGTCCACACCTGGCGCTGCGGCA ACGGCGGCGGCGGCGGGGGCGATAGCGCCAAGGTGGTGACCGTCGTCCCT GCTGCCGCCGATGTGGAAGAAGGTAAGATGGAAGATGACAAAGTCAGCGG CGGCGAGGCCAAAGGTACTGGCAGAAACGGGACCATGCCGGGCAGCAGCA GCGGCGGCAGCTGCAACAACAAGGGTGGTAGCTGCAGCAATGGCGGCGGC AGTAACAGCAGCACCAGGGGCTTCGGCATCGCGGAGAACGGCCTCAAAAG CCAGAACATGGCGCCATCCAGTGGCCGGCGCCGGTGTCGCACGGCGCTCG CCGACCCCCGCAACCTGCGGCCGGCCGAAATCGTATGTTTAGAGCATCCG TGCGTTCTCCACTACTTATCCTGCGGGCTTATGTGGCTCCGGGACAAGTA CGCTGTCCTCGGCGCCTTCAAGGATGCATGGTTCGGCGGCCGGCTGCCCA TCGCACCGTGCTTCCACAGGGACGCCCGGGACGCGCTCGCCGCGGCGGCG ACGCCGGCGGTGGTAACGACGGCGGCGGCGGTCGGCACTGCCGCAACCAC GTCCGTGGAAGTGGTGGGGCGGGCGGCAGCGGCACCGGCTGGAGAGAATG GGGCCGCCGGCAGCAGCGGCGGTGGCGGCAGCGGTGACTGTGGCGCTGTC GACAACGATGGATGGAGCCGGGATGCCATCGCGGACCCTATTGCGACCCT CTTTCGCTCTCAGGTGTGTGATAATTGGCTTCCTTCCTCCACCATTTCTT CATCCTTCTTTCTCTTACTGTTTTTTAGAATAGGTGTGCCGCTTTCTGCT TGTTTCTACGTGTATTTGTACGTACTCCTGTATCGAACATGTATACGCCT TCCTATTGTTGAGCGTTTGCCTTACAGCTTTCACACTTTAAAATGCGGAC GAGAAACCCTCAACCTGAACACCCTGTTCATTTCCTCGCTACCACAGGTG CTTTTGTGCCCACGCCGCGACGAGAAGGAGCTCGAGAGGCAGCTGCGCTC TGGCGTCTGCGAACGCAACCGCGGGCCGGCCGAGGCCATTGCTGCCGGGC GCCGCGCGCGCGGCATCGCCGCCGTGACCGCAACCGTAACAACCACTGGC CATAGCGAAGGATGCGACGCCGCTCCGGCTGACGCGGTAGGAGCCACGTT TGGCACTGCTGCCGCGTCGGCAACAGCTCAGAGGGTAGCGGCGGGGGGAG CAGCTAGGCCAGTAAGCCGAAGCCGCGGAGCGGTGGTCGTCAACGGAGGC AGCGGCGGAGTGAAGGCGTCTGCAAGTGGCGATGCCGCTCCGGCCGGCGA TGCAAGCGAGGCGGGCCCGTGTGGGTACGAGAAGGCATGGATGCTTGGAA ATATCGCGCGAATATACCTTTGAACCACATCGGTGCTTGGCGCTTGGGAA AATGAGACGGCGCGACAAAGGCTTGGAGGCAAAGAAGGCGTGGCAAT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1853:2128..4374-

>mRNA_P-wetherbeei_contig1853.2.1 ID=mRNA_P-wetherbeei_contig1853.2.1|Name=mRNA_P-wetherbeei_contig1853.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1923bp|location=Sequence derived from alignment at P-wetherbeei_contig1853:2128..4374- (Phaeothamnion wetherbeei SAG_119_79)
ATGGGGGGATTTAAAAATAAGCCTTTGGTCCCAGCGATGGTGCCCTCCAA
CGAATCTCTCGTCGGCATCGTTACTACAGTCCGTTTGACTCCGAAAGGCG
AGAGTCTCGATTCGACGAGCCTCCAACGCTCAGAAGCGCGGCGGTGGTCC
GTGCTCGAAGCGTTTCTGCTCTATCACTTGGACAAGGGATTCGATCGTAT
CTATCTGTTCTTTGACGCCGCCGACGGCAGCGACGAAGCGTACGTTCGAC
GAGTGGAAGAGGAACCCTCGTTTCTCGGCCGTGTAGAAATTACTCGCGCC
GGCGCGGAGCACGACGAAGCGGTGCGCGAAAGTTGCTCGCTCTGGCCGTC
CCTGGCTCTCTTTTACGAGACGGAGGTGCAGGCGCGGCAATCGCTAAACG
CAGAGTTGGCCATCCAGCGTGCGGAAGCGGAAGGCCTCCGCTGGCTCCTC
CACATTGACGCCGACGAGCTGTTCTGGACACCCGAGCCCAGCGTCAAGCC
GCACTTCGCGGCCCTGGAGGCCCAAGGCGTCGAACAGATGACCTACGCCA
ACCACGAGGGCGTGCCGGAGCGAGACGGCGTCGACAACTACTTTGCCGAA
GTGACGCTCTTCCGCCGCCATCACCTCTGCCTGCCGATATCGCACGAGGC
GAGCGCCGCCATGCGCTGGTGGTGCGCCCGCACGGGCCACGGCCAGTACA
TGATTGCCTATGACTGCGGCAAGTCAGCGGCGCGTGTCGCGCCGGGAGTC
GTCCCTGATGGCGTCCACACCTGGCGCTGCGGCAACGGCGGCGGCGGCGG
GGGCGATAGCGCCAAGGTGGTGACCGTCGTCCCTGCTGCCGCCGATGTGG
AAGAAGGTAAGATGGAAGATGACAAAGTCAGCGGCGGCGAGGCCAAAGGT
ACTGGCAGAAACGGGACCATGCCGGGCAGCAGCAGCGGCGGCAGCTGCAA
CAACAAGGGTGGTAGCTGCAGCAATGGCGGCGGCAGTAACAGCAGCACCA
GGGGCTTCGGCATCGCGGAGAACGGCCTCAAAAGCCAGAACATGGCGCCA
TCCAGTGGCCGGCGCCGGTGTCGCACGGCGCTCGCCGACCCCCGCAACCT
GCGGCCGGCCGAAATCGTATGTTTAGAGCATCCGTGCGTTCTCCACTACT
TATCCTGCGGGCTTATGTGGCTCCGGGACAAGTACGCTGTCCTCGGCGCC
TTCAAGGATGCATGGTTCGGCGGCCGGCTGCCCATCGCACCGTGCTTCCA
CAGGGACGCCCGGGACGCGCTCGCCGCGGCGGCGACGCCGGCGGTGGTAA
CGACGGCGGCGGCGGTCGGCACTGCCGCAACCACGTCCGTGGAAGTGGTG
GGGCGGGCGGCAGCGGCACCGGCTGGAGAGAATGGGGCCGCCGGCAGCAG
CGGCGGTGGCGGCAGCGGTGACTGTGGCGCTGTCGACAACGATGGATGGA
GCCGGGATGCCATCGCGGACCCTATTGCGACCCTCTTTCGCTCTCAGGTG
CTTTTGTGCCCACGCCGCGACGAGAAGGAGCTCGAGAGGCAGCTGCGCTC
TGGCGTCTGCGAACGCAACCGCGGGCCGGCCGAGGCCATTGCTGCCGGGC
GCCGCGCGCGCGGCATCGCCGCCGTGACCGCAACCGTAACAACCACTGGC
CATAGCGAAGGATGCGACGCCGCTCCGGCTGACGCGGTAGGAGCCACGTT
TGGCACTGCTGCCGCGTCGGCAACAGCTCAGAGGGTAGCGGCGGGGGGAG
CAGCTAGGCCAGTAAGCCGAAGCCGCGGAGCGGTGGTCGTCAACGGAGGC
AGCGGCGGAGTGAAGGCGTCTGCAAGTGGCGATGCCGCTCCGGCCGGCGA
TGCAAGCGAGGCGGGCCCGTGTGGGTACGAGAAGGCATGGATGCTTGGAA
ATATCGCGCGAATATACCTTTGA
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