mRNA_P-wetherbeei_contig1853.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1853.1.2 vs. uniprot
Match: D7G7V7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7V7_ECTSI) HSP 1 Score: 201 bits (510), Expect = 1.750e-59 Identity = 95/149 (63.76%), Postives = 109/149 (73.15%), Query Frame = 1
Query: 40 STAGKKRSXXXSGGPGDGPAHPFPTDYCDHFETPLRAYRDAEPVLVGLAAALGKARAELQIWDPFFCAGRTPRLLAQLGFTSVHHENVDFYEVIRQGAVPPHDVFVTNPPYSGNHKRRCLEFCAASGKPWLLLMPNYVATKDYYRSSAL 486
S AGKKR P HPFPT+Y DHFETPL+AYRD E L LA L K R L+IWDP++CAGRTPRLL QLGF V H N DFY+V+R+ P HDV +TNPPYSG+HK+RCLE+C ASGKPW LL+PNYVATKDYYR + L
Sbjct: 87 SLAGKKRPRESLAAPHH---HPFPTEYGDHFETPLQAYRDIEVALALLAKLLDKKRKHLRIWDPYYCAGRTPRLLGQLGFPKVEHSNQDFYKVVREKRQPKHDVLITNPPYSGDHKKRCLEYCRASGKPWFLLVPNYVATKDYYRLAVL 232
BLAST of mRNA_P-wetherbeei_contig1853.1.2 vs. uniprot
Match: A0A7S0D9T2_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0D9T2_MICPS) HSP 1 Score: 164 bits (414), Expect = 8.110e-46 Identity = 74/127 (58.27%), Postives = 93/127 (73.23%), Query Frame = 1
Query: 100 HPFPTDYCDHFETPLRAYRDAEPVLVGLAAALGKARAELQIWDPFFCAGRTPRLLAQLGFTSVHHENVDFYEVIRQGAVPPHDVFVTNPPYSGNHKRRCLEFCAASGKPWLLLMPNYVATKDYYRSS 480
HPF D DH ETP AY+D EP L +A AL K + +L+I+DP+FC G + LA+LGFT+V++EN DFY+VI Q VPPHDV +TNPPYSG+H R+ LEFC S KPWLLL+PN+V K YY+ S
Sbjct: 23 HPFEVDAADHCETPFAAYQDVEPFLFRVALALRKPKEKLRIYDPYFCEGSVAKHLARLGFTNVYNENEDFYKVIEQNRVPPHDVLLTNPPYSGDHFRKILEFCGRSEKPWLLLLPNFVCRKTYYQPS 149
BLAST of mRNA_P-wetherbeei_contig1853.1.2 vs. uniprot
Match: A0A6U0XTY6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U0XTY6_9STRA) HSP 1 Score: 158 bits (400), Expect = 3.490e-44 Identity = 75/125 (60.00%), Postives = 85/125 (68.00%), Query Frame = 1
Query: 97 AHPFPTDYCDHFETPLRAYRDAEPVLVGLAAALGKARAELQIWDPFFCAGRTPRLLAQLGFTSVHHENVDFYEVIRQGAVPPHDVFVTNPPYSGNHKRRCLEFCAASGKPWLLLMPNYVATKDYY 471
AHPF T+Y DHFETPL AY+ PVL +A LGK EL+I+DPF+CAG +A LGF + H N DFY +G VP DV VTNPPYS +HK R L FC SGKPW LLMPNYVATK YY
Sbjct: 8 AHPFSTEYGDHFETPLIAYKHLRPVLCWIAKRLGKKPKELRIYDPFYCAGAVVGRMASLGFPRLIHRNEDFYRCESEGRVPAFDVLVTNPPYSLDHKERILNFCVTSGKPWALLMPNYVATKQYY 132
BLAST of mRNA_P-wetherbeei_contig1853.1.2 vs. uniprot
Match: C1FIX8_MICCC (Uncharacterized protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1FIX8_MICCC) HSP 1 Score: 155 bits (392), Expect = 4.520e-41 Identity = 69/125 (55.20%), Postives = 91/125 (72.80%), Query Frame = 1
Query: 100 HPFPTDYCDHFETPLRAYRDAEPVLVGLAAALGKARAELQIWDPFFCAGRTPRLLAQLGFTSVHHENVDFYEVIRQGAVPPHDVFVTNPPYSGNHKRRCLEFCAASGKPWLLLMPNYVATKDYYR 474
HPF D DH ETP +AY+D EP L +A AL K + +L+I+DP+FC G + LA+LGFTSV+++N DFY+ I + +P HDV +TNPPYSG+H RR L FCA + KPWLLL+PN+V K YY+
Sbjct: 130 HPFEVDAADHCETPFQAYQDIEPFLFRMALALKKPKDKLRIYDPYFCEGSVAKHLARLGFTSVYNKNEDFYKCIEEKRIPEHDVLLTNPPYSGDHFRRILSFCAKNKKPWLLLLPNFVCRKQYYQ 254
BLAST of mRNA_P-wetherbeei_contig1853.1.2 vs. uniprot
Match: A0A4D9CYX8_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CYX8_9STRA) HSP 1 Score: 154 bits (388), Expect = 7.790e-41 Identity = 70/126 (55.56%), Postives = 84/126 (66.67%), Query Frame = 1
Query: 94 PAHPFPTDYCDHFETPLRAYRDAEPVLVGLAAALGKARAELQIWDPFFCAGRTPRLLAQLGFTSVHHENVDFYEVIRQGAVPPHDVFVTNPPYSGNHKRRCLEFCAASGKPWLLLMPNYVATKDYY 471
P++PFPTDY DHFE+PLRAY D EP L L AL + + L I+DP++C G LL LGF V ++ DFY + G VP +DV VTNPPYS NHK + L FC S KPW LL+PNYVA K YY
Sbjct: 147 PSYPFPTDYADHFESPLRAYEDLEPFLQWLRRALRRDKTSLHIYDPYYCQGAVVNLLKSLGFPRVTNKMRDFYADVAAGTVPSYDVLVTNPPYSDNHKEKILRFCLGSDKPWCLLLPNYVANKSYY 272
BLAST of mRNA_P-wetherbeei_contig1853.1.2 vs. uniprot
Match: A0A7S1IGA0_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IGA0_9EUGL) HSP 1 Score: 152 bits (383), Expect = 8.900e-41 Identity = 67/122 (54.92%), Postives = 88/122 (72.13%), Query Frame = 1
Query: 115 DYCDHFETPLRAYRDAEPVLVGLAAALGKARAELQIWDPFFCAGRTPRLLAQLGFTSVHHENVDFYEVIRQGAVPPHDVFVTNPPYSGNHKRRCLEFCAASGKPWLLLMPNYVATKDYYRSS 480
+Y DHFET +AY+D P+L A + + + L I+DPF+C G R LA LGF +VHHE DFY ++ G VP HD+ +TNPPYSG+HK R LE+C ASGKPW LL+PNY+ATK+YY+S+
Sbjct: 96 EYGDHFETCDQAYKDITPLLKEAARLMQRDASSLGIYDPFYCDGAVKRHLAALGFHTVHHEKRDFYADVKNGQVPEHDILITNPPYSGDHKERILEYCCASGKPWALLLPNYIATKNYYQST 217
BLAST of mRNA_P-wetherbeei_contig1853.1.2 vs. uniprot
Match: A0A7R9V2F9_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9V2F9_9CHLO) HSP 1 Score: 150 bits (380), Expect = 2.420e-40 Identity = 70/132 (53.03%), Postives = 88/132 (66.67%), Query Frame = 1
Query: 94 PAHPFPTDYCDHFETPLRAYRDAEPVLVGLAAALGKARAELQIWDPFFCAGRTPRLLAQLGFTSVHHENVDFYEVIRQGAVPPHDVFVTNPPYSGNHKRRCLEFCAASGKPWLLLMPNYVATKDYYRSSALT 489
P P+PTDY DHFET A D EP L LA LGK ++EL ++DP++C G + Q+G + HE DFY ++ G+VP +D+ VTNPPYSG+HK R L+FC SGK W LLMPNYVATK Y+ S A T
Sbjct: 79 PCWPYPTDYLDHFETSKEAIADLEPALYRLATHLGKPKSELVVYDPYYCKGTIRQHWEQIGVKRLIHEKRDFYADVKSGSVPEYDILVTNPPYSGDHKERILQFCMESGKAWALLMPNYVATKLYFTSIAST 210
BLAST of mRNA_P-wetherbeei_contig1853.1.2 vs. uniprot
Match: A0A7R9VAV0_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9VAV0_9CHLO) HSP 1 Score: 150 bits (379), Expect = 9.380e-40 Identity = 74/134 (55.22%), Postives = 88/134 (65.67%), Query Frame = 1
Query: 73 SGGPGDGPAHPFP-TDYCDHFETPLRAYRDAEPVLVGLAAALGKARAELQIWDPFFCAGRTPRLLAQLGFTSVHHENVDFYEVIRQGAVPPHDVFVTNPPYSGNHKRRCLEFCAASGKPWLLLMPNYVATKDYY 471
+G P P H F TD DH ETP AYRD EP+L LA LG+ + L+I+DP+FCAG R L LGFT V +ENVDFY G+VP DV VTNPP+S +H RC+EF A GKPW LLMP++VA K YY
Sbjct: 206 AGAPAALPRHTFDVTDTRDHAETPFEAYRDLEPLLFRLAGQLGRTKDSLRIYDPYFCAGSVKRHLGHLGFTHVFNENVDFYAASAAGSVPEFDVLVTNPPFSADHMARCVEFAAGCGKPWALLMPDFVAKKAYY 339
BLAST of mRNA_P-wetherbeei_contig1853.1.2 vs. uniprot
Match: D7G4N4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4N4_ECTSI) HSP 1 Score: 154 bits (388), Expect = 1.210e-39 Identity = 76/146 (52.05%), Postives = 92/146 (63.01%), Query Frame = 1
Query: 100 HPFPTDYCDHFETPLRAYRDAEPVLVGLAAALGKARAELQIWDPFFCAGRTPRLLAQLGFTSVHHENVDFYEVIRQGAVPPHDVFVTNPPYSGNHKRRCLEFCAASG-KPWLLLMPNYVATKDYYRSSALTRTPASATGRFTWCPP 534
+PF + CDH ET RAY D P+L LAA LGK +L I+DP++C G T LA LGF VH+ DFYEV++ G +P HDV VTNPP+SG H + L+FCA G KPW LL+PNYV KDYY S R+ AT F PP
Sbjct: 297 YPFEVEECDHCETSERAYSDISPLLSALAAELGKPPEDLVIYDPYYCQGSTVGRLASLGFPRVHNRKEDFYEVVKNGNIPQHDVVVTNPPFSGEHMPKILKFCARQGAKPWFLLLPNYVYLKDYYEPSLGRRSGQGATRPFYLTPP 442
BLAST of mRNA_P-wetherbeei_contig1853.1.2 vs. uniprot
Match: A0A2J8ADG8_9CHLO (Uncharacterized protein n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8ADG8_9CHLO) HSP 1 Score: 150 bits (378), Expect = 1.670e-39 Identity = 70/123 (56.91%), Postives = 85/123 (69.11%), Query Frame = 1
Query: 103 PFPTDYCDHFETPLRAYRDAEPVLVGLAAALGKARAELQIWDPFFCAGRTPRLLAQLGFTSVHHENVDFYEVIRQGAVPPHDVFVTNPPYSGNHKRRCLEFCAASGKPWLLLMPNYVATKDYY 471
PF DY DHFET RA +D PVL L+ L K +EL ++DPF+CAG A LG T H N DFY+ +++GA+P +D+ VTNPPYSG+HK R LEFC SGKPW LLMPNYVATK Y+
Sbjct: 119 PFAADYNDHFETDFRAVQDILPVLQQLSKRLCKPLSELAVYDPFYCAGGVRAHYAALGITKFIHRNRDFYDDVKKGALPSYDILVTNPPYSGDHKERILEFCLRSGKPWCLLMPNYVATKAYF 241 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1853.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1853.1.2 >prot_P-wetherbeei_contig1853.1.2 ID=prot_P-wetherbeei_contig1853.1.2|Name=mRNA_P-wetherbeei_contig1853.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=220bp GIGGGGSGWGISRSTAGKKRSKSSSGGPGDGPAHPFPTDYCDHFETPLRAback to top mRNA from alignment at P-wetherbeei_contig1853:559..1867+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1853.1.2 ID=mRNA_P-wetherbeei_contig1853.1.2|Name=mRNA_P-wetherbeei_contig1853.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1309bp|location=Sequence derived from alignment at P-wetherbeei_contig1853:559..1867+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1853:559..1867+ >mRNA_P-wetherbeei_contig1853.1.2 ID=mRNA_P-wetherbeei_contig1853.1.2|Name=mRNA_P-wetherbeei_contig1853.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=660bp|location=Sequence derived from alignment at P-wetherbeei_contig1853:559..1867+ (Phaeothamnion wetherbeei SAG_119_79)back to top |