mRNA_P-wetherbeei_contig18527.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig18527.1.1
Unique NamemRNA_P-wetherbeei_contig18527.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig18527.1.1 vs. uniprot
Match: A0A537DLM2_9PROT (Chromosome partition protein Smc n=4 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537DLM2_9PROT)

HSP 1 Score: 353 bits (906), Expect = 1.300e-107
Identity = 217/438 (49.54%), Postives = 264/438 (60.27%), Query Frame = 1
Query:   16 ADNRPAKASFYLSASSVGTVSLAGHESLAGKVTASNPGVAGAIADWLSGVYVAKGMPDDGMRAALPPGASLINQDGHRFTRHTASFHAPDATDSGLLLRQAEIDSLRSRCQDLAGVLETARGEVAAKEXXXXXXXXXXXXXXXXXAELQGSSHEARIELLKLTQAADRYRERSGQIGAELQGIAIELDKASARKIELIAMLEGIRAEIATLHASLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRADLDVAKLTEELAVDPIPVVREALDAAVEARISCEKTLAEARNTVEAASATLRGLEESRLLIEGRIAPLRERIGELRLKEQAASINHDQFAAQLAEAGADESALAAGAEGAPRPSALQSEITRLNQSISELGAVNLAALEELKTSSERKGFLDAQSADLEEAVHT 1329
            AD  PAKAS +   +S G     G+E LA K+ A +P V+GA+ADWL+G Y A+  PD   +AALPPGA L+++DGH+FTRHT SFHAPD  D+GLL RQ+ I++L + C+DL   +  A+      E                 AE Q   H+A+I+ LKL QA +RYRERS Q+ AEL  I  E  +      +     E I AEIATL   L                                                         RA+L+VAKLTEELA DPIP VR  LDAAVE+R+ CE TLA ARN VE A+  LR LEE+RL IE ++APLRER+GELRLKEQAA IN DQFAAQL EA ADE  L+  AE APRP+ALQ EITRL Q+I++LGAVNLAALEEL++S ERKGFLD+Q+ADLEEAVHT
Sbjct:  562 ADRPPAKASLFARGNSPGAPGAPGYEPLASKIRAVDPAVSGALADWLAGAYAAEESPDAARQAALPPGAVLVDRDGHQFTRHTVSFHAPDQADAGLLARQSAIEALDAGCRDLQQKVGAAQDAHRQLESEAAGRSEALEQARRVIAETQKEQHDAQIDQLKLAQAEERYRERSEQVRAELSEIEQEASRGRQALHDGXQAAERIAAEIATLREKLEAVRGGHLAAETALAEQRRAVQQAERDAQDALFGERECGSKIAEIDNSVRVIDQQIERAELEVAKLTEELAADPIPAVRHGLDAAVESRLGCETTLAAARNAVEGAAGALRELEEARLQIEAKLAPLRERLGELRLKEQAAQINFDQFAAQLREANADEERLSREAERAPRPAALQGEITRLAQAINDLGAVNLAALEELRSSQERKGFLDSQAADLEEAVHT 999          
BLAST of mRNA_P-wetherbeei_contig18527.1.1 vs. uniprot
Match: A0A537BQD7_9PROT (Chromosome partition protein Smc n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537BQD7_9PROT)

HSP 1 Score: 330 bits (845), Expect = 7.180e-99
Identity = 203/438 (46.35%), Postives = 255/438 (58.22%), Query Frame = 1
Query:   16 ADNRPAKASFYLSASSVGTVSLAGHESLAGKVTASNPGVAGAIADWLSGVYVAKGMPDDGMRAALPPGASLINQDGHRFTRHTASFHAPDATDSGLLLRQAEIDSLRSRCQDLAGVLETARGEVAAKEXXXXXXXXXXXXXXXXXAELQGSSHEARIELLKLTQAADRYRERSGQIGAELQGIAIELDKASARKIELIAMLEGIRAEIATLHASLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRADLDVAKLTEELAVDPIPVVREALDAAVEARISCEKTLAEARNTVEAASATLRGLEESRLLIEGRIAPLRERIGELRLKEQAASINHDQFAAQLAEAGADESALAAGAEGAPRPSALQSEITRLNQSISELGAVNLAALEELKTSSERKGFLDAQSADLEEAVHT 1329
            AD  PAKAS +   +  GT +  G+E LA K+ A +P V+ A+ADWL+G Y A+  PD   RAALPPGA L+++DGH+FTRHT SFHAP+  D+GLL RQ+ I++L + C+DL   +  A+    + +                 A  Q + H+A+I+ LKL QA +RYRERS Q+ AEL  +  E+ +                   A L   +                                                         RADL++AKLTEELA DPIP VR  LDAAVE+R+ C+ TLA ARN VE A+  LR LEE  L  E ++APLRER+GEL+LKEQAA IN DQFAAQL EA ADE  L+  AE APRP+ LQSEITRL Q+I+ELGAVNLAALEEL++S ERKGFLD+QSADLEEAV T
Sbjct:  562 ADRPPAKASVFTRGNGTGTPAAPGYEPLASKIRAVDPAVSSALADWLAGAYAAEKAPDAARRAALPPGAVLVDRDGHQFTRHTVSFHAPEQADAGLLARQSAIEALVASCRDLQQKVGAAQDVHGSLQIEAAERSKALEHARLAIAARQKAQHDAQIDQLKLAQAQERYRERSEQVRAELADLEQEVSRGEQALXXXXXXXXXXXXXXAALRDKVDAARGAHLAAESALAEERRVMQQAERDAQDALFGERECSSKIAEIDNSVRVIDQQIERADLEIAKLTEELAADPIPAVRHGLDAAVESRLGCDTTLAAARNAVEGAAGALRELEEGLLHSEAKVAPLRERLGELKLKEQAAQINFDQFAAQLREANADEQRLSKEAEKAPRPATLQSEITRLAQAINELGAVNLAALEELRSSQERKGFLDSQSADLEEAVRT 999          
BLAST of mRNA_P-wetherbeei_contig18527.1.1 vs. uniprot
Match: A0A521V035_9PROT (Chromosome segregation protein SMC (Fragment) n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521V035_9PROT)

HSP 1 Score: 329 bits (843), Expect = 1.070e-98
Identity = 205/441 (46.49%), Postives = 255/441 (57.82%), Query Frame = 1
Query:    1 LSGFAADNRPAKASFYLSASSVGTVSLAGHESLAGKVTASNPGVAGAIADWLSGVYVAKGMPDDGMRAALPPGASLINQDGHRFTRHTASFHAPDATDSGLLLRQAEIDSLRSRCQDLAGVLETARGEVAAKEXXXXXXXXXXXXXXXXXAELQGSSHEARIELLKLTQAADRYRERSGQIGAELQGIAIELDKASARKIELIAMLEGIRAEIATLHASLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRADLDVAKLTEELAVDPIPVVREALDAAVEARISCEKTLAEARNTVEAASATLRGLEESRLLIEGRIAPLRERIGELRLKEQAASINHDQFAAQLAEAGADESALAAGAEGAPRPSALQSEITRLNQSISELGAVNLAALEELKTSSERKGFLDAQSADLEEAV 1323
            L+   AD  P  AS +   ++    +  G   LA  V A +P V GA+ADW +GVY  +G+PD   RAALPPGA L+N++G R+TR+T  FHAPD  D+G+L RQAEID+L  RC++L      AR      E                 A  Q   HEA ++ LKL+QA +RYRERS QI  EL  +A++ ++ S R  +  A L  + AEI     +L                                                         RAD++ A L EEL+VDP+P +R+  DAAVE+R++CEKTLA AR+ VEAAS  LR LEE+RL  + RIAPLRER+GELRL+EQAA IN +QFA QL E GADE+ L + AE APRPS LQ EITRL  +ISELGAVNLAALEELKTS ERK FLDAQ ADLEEAV
Sbjct:  587 LAALTADRPPVMASVFERGAASAGPAAPGLAPLAAHVHAIDPAVGGALADWFAGVYTLEGLPDAAQRAALPPGALLVNRNGDRYTRYTVGFHAPDPADAGILARQAEIDALEQRCRELMEHHAAARAGAEQAEAETQARQDGLEAARRRLAARQSERHEAELQRLKLSQALERYRERSAQIRIELAELAVQFERDSLRLEDCGAALVRLAAEIDAERGALEAVSAAHLAAEGALAAQRRATQQAERDLQDAVFGERECVSKIAEMENAVAVIDQQIARADVEAAALAEELSVDPLPALRQVRDAAVESRMACEKTLAAARDAVEAASGALRALEEARLQADARIAPLRERVGELRLREQAAQINQEQFAGQLREGGADEARLGSEAERAPRPSTLQGEITRLANAISELGAVNLAALEELKTSRERKNFLDAQCADLEEAV 1027          
BLAST of mRNA_P-wetherbeei_contig18527.1.1 vs. uniprot
Match: A0A1F3ZQQ8_9PROT (Chromosome partition protein Smc n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_67_12 TaxID=1797483 RepID=A0A1F3ZQQ8_9PROT)

HSP 1 Score: 326 bits (835), Expect = 1.910e-97
Identity = 208/443 (46.95%), Postives = 250/443 (56.43%), Query Frame = 1
Query:    1 LSGFAADNRPAKASFYLSASSVGTVSLAGHESLAGKVTASNPGVAGAIADWLSGVYVAKGMPDDGMRAALPPGASLINQDGHRFTRHTASFHAPDATDSGLLLRQAEIDSLRSRCQDLAGVLETARGEVAAKEXXXXXXXXXXXXXXXXXAELQGSSHEARIELLKLTQAADRYRERSGQIGAELQGIAIELDKASARKIELIAMLEGIRAEIATLHASLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRADLDVAKLTEELAVDPIPVVREALDAAVEARISCEKTLAEARNTVEAASATLRGLEESRLLIEGRIAPLRERIGELRLKEQAASINHDQFAAQLAEAGADESALAAGAEGAPRPSALQSEITRLNQSISELGAVNLAALEELKTSSERKGFLDAQSADLEEAVHT 1329
            L    AD  P KAS +           +G+  LA KV   +P VA A+ DWL GVY  +G+P    R ALP GA L+ ++G + TR T SFHAPD  D+G+L RQAEID+L+ RC DLA     AR    + E                 A LQ   H A IE LK  QA +RYRER+ QI A +  IA+E+++ + R  E  A+   I  EIA    +L                                                         RA+ ++AKL EEL+ DP+P VR ALDAAVEARI CEKTLA  R +VEAA+  LRG EE RL IE RIAPLRER+GELRLKEQAA I+HDQFA QL EA ADE  LA  +E APRPS LQ EITR++Q+I ELGAVNLAALEEL +S+ERK FLDAQ+ DLEEAV T
Sbjct:  557 LGALGADRPPVKASAFAPGGGAAPAPPSGYLPLAQKVHTVDPAVAAALNDWLFGVYAIEGLPAAEERQALPAGAVLVGRNGDQCTRSTISFHAPDPADAGILARQAEIDALQERCGDLAAHTAAARAAAESLESEFASRRASLDEARSAIAALQSEKHAAEIERLKRAQALERYRERTSQIRAVVAEIALEMERGAVRLEEFQAVXXXIAGEIAAAQDALASVTAEHAAAEAELADRRRTLQDADREAQAAVFAERECTSKIAELDNSVRMIDQQIARAEHELAKLDEELSTDPVPAVRRALDAAVEARIECEKTLAGTRESVEAAAELLRGFEEQRLQIETRIAPLRERVGELRLKEQAAQISHDQFAGQLREANADEGRLAGESERAPRPSTLQGEITRISQAIQELGAVNLAALEELNSSAERKKFLDAQATDLEEAVRT 999          
BLAST of mRNA_P-wetherbeei_contig18527.1.1 vs. uniprot
Match: A0A1Y0BAJ9_9BACT (A109 n=1 Tax=uncultured bacterium TaxID=77133 RepID=A0A1Y0BAJ9_9BACT)

HSP 1 Score: 320 bits (821), Expect = 2.900e-97
Identity = 219/441 (49.66%), Postives = 261/441 (59.18%), Query Frame = 1
Query:    1 LSGFAADNRPAKASFYLSASSVGTVSLAGHESLAGKVTASNPGVAGAIADWLSGVYVAKGMPDDGMRAALPPGASLINQDGHRFTRHTASFHAPDATDSGLLLRQAEIDSLRSRCQDLAGVLETARGEVAAKEXXXXXXXXXXXXXXXXXAELQGSSHEARIELLKLTQAADRYRERSGQIGAELQGIAIELDKASARKIELIAMLEGIRAEIATLHASLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRADLDVAKLTEELAVDPIPVVREALDAAVEARISCEKTLAEARNTVEAASATLRGLEESRLLIEGRIAPLRERIGELRLKEQAASINHDQFAAQLAEAGADESALAAGAEGAPRPSALQSEITRLNQSISELGAVNLAALEELKTSSERKGFLDAQSADLEEAV 1323
            L    AD  P KA  +          LAG+ SLA KV A+ P + GA+ADWL+  +V  G P    R  +P G  L+N+DGH+FTR+T SFHAPD  D+GLL RQAEI+SL+ R  +LA              XXXXXXXXXXXX     AE Q   H+  IELLKL QA +R+RERS QI +E+  IA E  +  AR  E  A       EIA     L                                                         RA+ +VAKLTEEL+VDP+P VR ALDAAVE RI+ EK LAEARN VEAA+  LRGLEE RL +E R+APLRERIGELRLKEQAA INHDQ A QL+EAGADE+ LA+ AE APRP+ LQ EI+R+ Q++ ELGAVNLAALEELK+S ERK +LDAQ+ DL+EAV
Sbjct:  286 LDAVVADVPPVKAGVFRYGDGHAAAPLAGYASLATKVHATRPELGGALADWLAHAHVCDGTPGPAERDRVPAGMLLVNRDGHQFTRYTVSFHAPDPADAGLLARQAEIESLQQRVGELAARXXXXXXXXXXXXXXXXXXXXXXXXARGVLAERQQLRHDVHIELLKLQQAQERFRERSTQIESEMAEIAQEAGRDEARCAECRASAASAGDEIAAARLRLEAVRGAHQEAEKALVAQRLAGQQAERDAQDAVFGERECASKIAEIDSSVRLIDQQIERAEAEVAKLTEELSVDPVPAVRAALDAAVEERITREKVLAEARNAVEAAALALRGLEEERLQVESRLAPLRERIGELRLKEQAAQINHDQHAGQLSEAGADEARLASEAERAPRPATLQGEISRITQAVGELGAVNLAALEELKSSQERKDYLDAQATDLDEAV 726          
BLAST of mRNA_P-wetherbeei_contig18527.1.1 vs. uniprot
Match: A0A537ACU0_9PROT (Chromosome partition protein Smc n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537ACU0_9PROT)

HSP 1 Score: 319 bits (818), Expect = 4.780e-95
Identity = 208/434 (47.93%), Postives = 252/434 (58.06%), Query Frame = 1
Query:   28 PAKASFYLSASSVGTVSLAGHESLAGKVTASNPGVAGAIADWLSGVYVAKGMPDDGMRAALPPGASLINQDGHRFTRHTASFHAPDATDSGLLLRQAEIDSLRSRCQDLAGVLETARGEVAAKEXXXXXXXXXXXXXXXXXAELQGSSHEARIELLKLTQAADRYRERSGQIGAELQGIAIELDKASARKIELIAMLEGIRAEIATLHASLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRADLDVAKLTEELAVDPIPVVREALDAAVEARISCEKTLAEARNTVEAASATLRGLEESRLLIEGRIAPLRERIGELRLKEQAASINHDQFAAQLAEAGADESALAAGAEGAPRPSALQSEITRLNQSISELGAVNLAALEELKTSSERKGFLDAQSADLEEAVHT 1329
            PAKAS +  ++ +     +G   LA KV A +  + GA+ADWL+GV+V  G PD   RAALPP A L+N++G +FTRHT S HAPD  D+GLL RQAEI +L  RC +LA  LE A+  +   E             XXXX        +A+IE LKL QA +RYRERS Q+ AE   +A E ++              I  EIA     L                                                         R DL+V KLTEELA DPIP VR ALDAAVEARI+CEKTLAEARNTVE A+A LR +E        ++APLRER+GELRLKEQAAS+N++Q+A QL EAGADE+ L   AE APRPSALQ EITR+ Q + ELGAVNLAA+EEL+TS ERKGFLDAQS+DL+EAV T
Sbjct:  563 PAKASLFEPSADLAAAPASGVP-LAAKVHALDDSIRGALADWLAGVFVTDGRPDAAARAALPPAAVLVNREGDQFTRHTVSLHAPDPADAGLLARQAEIGALGERCAELARQLEGAQRALEQAENERAAREAALEDAXXXXXXXXXXXXDAQIEQLKLAQAQERYRERSAQLHAEQTELAAEAERGGEALAACERAAAAIGDEIAAARTRLEASRTEHINAETALAEQRRAVQQAEREAQDALFGERECGSKIAEIDHSVRVIDQQIERGDLEVLKLTEELAADPIPAVRVALDAAVEARIACEKTLAEARNTVEVAAAALREIEXXXXXXXXKLAPLRERLGELRLKEQAASLNYEQYATQLREAGADETLLTGEAERAPRPSALQGEITRITQQLGELGAVNLAAVEELRTSRERKGFLDAQSSDLDEAVKT 995          
BLAST of mRNA_P-wetherbeei_contig18527.1.1 vs. uniprot
Match: A0A1F4EAK4_9PROT (Chromosome partition protein Smc n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4EAK4_9PROT)

HSP 1 Score: 316 bits (810), Expect = 6.840e-94
Identity = 204/438 (46.58%), Postives = 248/438 (56.62%), Query Frame = 1
Query:    7 GFAADNRPAKASFYLSASSVGTVSLAGHESLAGKVTASNPGVAGAIADWLSGVYVAKGMPDDGMRAALPPGASLINQDGHRFTRHTASFHAPDATDSGLLLRQAEIDSLRSRCQDLAGVLETARGEVAAKEXXXXXXXXXXXXXXXXXAELQGSSHEARIELLKLTQAADRYRERSGQIGAELQGIAIELDKASARKIELIAMLEGIRAEIATLHASLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRADLDVAKLTEELAVDPIPVVREALDAAVEARISCEKTLAEARNTVEAASATLRGLEESRLLIEGRIAPLRERIGELRLKEQAASINHDQFAAQLAEAGADESALAAGAEGAPRPSALQSEITRLNQSISELGAVNLAALEELKTSSERKGFLDAQSADLEEA 1320
            G   D  P KAS +  A +    + AG   LA +V A +P V GA+ DWL+G+Y   G  D   RAALPPG  L+N+DG RFTRHT  FHAPD  D+G+L RQ EID+L  +C+ L      ARG     E                 A      HEA ++ L+L+QA +RYRERS QI +EL  IA +  + + R     A L  +  EIAT   +L                                                         RA+ + A L EEL+VDP+P +R+A + AVEAR+ CEK+LA AR+TVEAA+  LR  EE RL  E RIAPLRERIGELRLKEQAA INH+QFAAQL E GADE  LAA  E APRP+ALQ EITRL Q+I ELGAVNLAAL+ELKTSSERK +LDAQ+ DL+EA
Sbjct:  559 GLTTDRPPVKASVFERAPAGVQPAAAGLVPLAHRVHAIDPAVGGALGDWLAGIYTVDGTADAAQRAALPPGTVLVNRDGDRFTRHTVGFHAPDPADAGILARQTEIDALEVQCRVLVERHVAARGAAERVEAEVQARQGALEAARTQLATRLSERHEAELQRLRLSQALERYRERSAQIRSELAEIAAQSGRDALRLENCDAALARLAGEIATGRTALETVNAAHAAAEAAMAAQRRATQQAERDLQDAAFGERECTSKIAEIERSVALIDEQLVRAEAEAASLGEELSVDPLPELRQAREVAVEARLGCEKSLAVARDTVEAAAGALREFEELRLQGEARIAPLRERIGELRLKEQAAQINHEQFAAQLREGGADELRLAAEQERAPRPAALQGEITRLAQAIGELGAVNLAALDELKTSSERKSYLDAQATDLDEA 996          
BLAST of mRNA_P-wetherbeei_contig18527.1.1 vs. uniprot
Match: A0A1F4FHQ6_9PROT (Chromosome partition protein Smc n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14 TaxID=1797501 RepID=A0A1F4FHQ6_9PROT)

HSP 1 Score: 312 bits (800), Expect = 1.770e-92
Identity = 213/443 (48.08%), Postives = 259/443 (58.47%), Query Frame = 1
Query:    1 LSGFAADNRPAKASFYLSASSVGTVSLAGHESLAGKVTASNPGVAGAIADWLSGVYVAKGMPDDGMRAALPPGASLINQDGHRFTRHTASFHAPDATDSGLLLRQAEIDSLRSRCQDLAGVLETARGEVAAKEXXXXXXXXXXXXXXXXXAELQGSSHEARIELLKLTQAADRYRERSGQIGAELQGIAIELDKASARKIELIAMLEGIRAEIATLHASLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRADLDVAKLTEELAVDPIPVVREALDAAVEARISCEKTLAEARNTVEAASATLRGLEESRLLIEGRIAPLRERIGELRLKEQAASINHDQFAAQLAEAGADESALAAGAEGAPRPSALQSEITRLNQSISELGAVNLAALEELKTSSERKGFLDAQSADLEEAVHT 1329
            L+   AD  P+KAS +  A+  G VS A  E+LA K+ A++P VAGA+ADWL+GV++A+  P    RAALPP    + ++GH+FTRHT S HAPDA D+GLL RQAEI+ L  R +++  VL  A        XXXXXXXXXXX      +  Q + H+A+IE LKL QA DRYRERS Q+GAEL+ +    +   A   +  A  E + A+IA     L                                                         RADL+VAKL EELA DPIP VREALDAAVEARISCEKTL EARN V                         ER+GELRLKEQAA ++ +QF AQL EAGADE+ L A AE APRPS+LQ EITR+ Q+I ELGAVNLAALEEL T+ ERKG+LD+QSADL+EAVHT
Sbjct:  557 LAAVLADRPPSKASVFERAAGEGVVS-AQFETLAAKIHAADPAVAGALADWLAGVFIAEQAPSAEWRAALPPAGIFVTREGHQFTRHTVSLHAPDAADTGLLARQAEIEELEKRLEEMQAVLAAAXXXXXXXXXXXXXXXXXXXGARLEISARQKAQHDAQIEHLKLMQAQDRYRERSAQVGAELEQVXXXXESGDAALADSRAAQERVIADIAVARERLEAARAAHVAAETTLADQRRAAQQAEREVQDALFGERECSSKISEIDNSVKVIDQQIERADLEVAKLNEELANDPIPAVREALDAAVEARISCEKTLGEARNAVXXXXXXXXXXXXXXXXXXXXXXXXXERVGELRLKEQAALLSFEQFDAQLREAGADEALLVAEAERAPRPSSLQGEITRITQAIGELGAVNLAALEELTTNQERKGYLDSQSADLDEAVHT 998          
BLAST of mRNA_P-wetherbeei_contig18527.1.1 vs. uniprot
Match: A0A536WPX1_9PROT (Chromosome partition protein Smc n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536WPX1_9PROT)

HSP 1 Score: 311 bits (798), Expect = 3.280e-92
Identity = 197/434 (45.39%), Postives = 251/434 (57.83%), Query Frame = 1
Query:   28 PAKASFYLSASSVGTVSLAGHESLAGKVTASNPGVAGAIADWLSGVYVAKGMPDDGMRAALPPGASLINQDGHRFTRHTASFHAPDATDSGLLLRQAEIDSLRSRCQDLAGVLETARGEVAAKEXXXXXXXXXXXXXXXXXAELQGSSHEARIELLKLTQAADRYRERSGQIGAELQGIAIELDKASARKIELIAMLEGIRAEIATLHASLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRADLDVAKLTEELAVDPIPVVREALDAAVEARISCEKTLAEARNTVEAASATLRGLEESRLLIEGRIAPLRERIGELRLKEQAASINHDQFAAQLAEAGADESALAAGAEGAPRPSALQSEITRLNQSISELGAVNLAALEELKTSSERKGFLDAQSADLEEAVHT 1329
            PAKAS + ++  V T   A    LA KV A + G+ GA+ADWLSGV+V +G P   +R ALP GA L+N++G +FTRHT S HAPD  ++GLL RQAEI++L  RC +LA  L  A+  +   E                 A  + + H+A IE LKL QA +RYRER      E   +A   ++              I  EIA    +L                                                         RA+L+VAKLTEELA DPIP VR+ LDAAVEAR+ CEKTLA ARNTVE A+  LR +EE++L IE ++ PLRER+GELRLKEQAAS+N++Q+A+QL EAGADE+ L+A AE +PRP+ LQ EITR+   I E GAVNLAA+EEL++S  RKGFLD+Q+ADLEEAV T
Sbjct:  563 PAKASLFEASREVSTAPAADLP-LAAKVHALDEGIRGALADWLSGVFVCEGRPSASIRGALPAGAVLVNREGDQFTRHTVSLHAPDPANAGLLARQAEIEALEGRCAELARQLANAQHGLEQAESERVEREAALEDSRQAIARQEQARHDAEIESLKLAQAEERYRERXXXXXXEQTELAAAAEQGEDALAASGRAAAAIGEEIAGARTALEARSSEHLSAESALAEQRKAVQQAERDAQDALFGERECASKMAEIDHSVNVIDQQIERAELEVAKLTEELAADPIPGVRQGLDAAVEARLGCEKTLAAARNTVEGAAGALREIEEAKLAIEAKVLPLRERLGELRLKEQAASLNYEQYASQLREAGADEALLSAEAERSPRPATLQGEITRITGQIGEFGAVNLAAVEELRSSRSRKGFLDSQAADLEEAVKT 995          
BLAST of mRNA_P-wetherbeei_contig18527.1.1 vs. uniprot
Match: A0A536SJD8_9PROT (Chromosome segregation protein SMC (Fragment) n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536SJD8_9PROT)

HSP 1 Score: 304 bits (779), Expect = 5.390e-92
Identity = 218/434 (50.23%), Postives = 271/434 (62.44%), Query Frame = 1
Query:   28 PAKASFYLSASSVGTVSLAGHESLAGKVTASNPGVAGAIADWLSGVYVAKGMPDDGMRAALPPGASLINQDGHRFTRHTASFHAPDATDSGLLLRQAEIDSLRSRCQDLAGVLETARGEVAAKEXXXXXXXXXXXXXXXXXAELQGSSHEARIELLKLTQAADRYRERSGQIGAELQGIAIELDKASARKIELIAMLEGIRAEIATLHASLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRADLDVAKLTEELAVDPIPVVREALDAAVEARISCEKTLAEARNTVEAASATLRGLEESRLLIEGRIAPLRERIGELRLKEQAASINHDQFAAQLAEAGADESALAAGAEGAPRPSALQSEITRLNQSISELGAVNLAALEELKTSSERKGFLDAQSADLEEAVHT 1329
            PAKAS + +A +    +  G   LA KV   +  + GA+ADWL+GV+   G PD G RA L  GA L+N+ G +FTRHT S+HAPDA D+GLL RQAEID+L++RC +L G L           XXXXXXXXXX       A  + + H+A IE LKL QA +RYRERS Q+ AE + +A E  +  A                       XXXXXXXXXXXXXX                                           RA+ ++AKL EELA DPIP VR+ALD AVE R++CEKTLA ARN VEAA+  LR +EE+RL IE R+APLRE+ GELRLKEQAAS+N++Q+A+QLAEA ADE+ LAA AE   RP++LQ EITRL Q I+ELGAVNLAA+ EL++S ERKGFLD+Q+ADLEEA++T
Sbjct:  194 PAKASIFQAAGTAEPAAADGVP-LAAKVHVLDDAIRGALADWLAGVFAIDGTPDAGTRARLAAGAVLVNRAGDQFTRHTVSYHAPDAADAGLLARQAEIDALQARCAELGGELXXXXXXXXXXXXXXXXXXXXXDQARHEIARQEQARHDAEIESLKLAQAEERYRERSAQLRAEAEELAAEAAQGGAALAACEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEQRRAVQQAERDAQDALFGERECSSKIVEVDNSVRVIDQQIERAEQEIAKLIEELAADPIPAVRQALDGAVETRLACEKTLAGARNAVEAAAGALREIEEARLAIESRLAPLREKQGELRLKEQAASLNYEQYASQLAEAAADEAVLAAEAERPVRPASLQGEITRLTQQINELGAVNLAAVAELRSSRERKGFLDSQAADLEEAINT 626          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18527.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A537DLM2_9PROT1.300e-10749.54Chromosome partition protein Smc n=4 Tax=Betaprote... [more]
A0A537BQD7_9PROT7.180e-9946.35Chromosome partition protein Smc n=1 Tax=Betaprote... [more]
A0A521V035_9PROT1.070e-9846.49Chromosome segregation protein SMC (Fragment) n=2 ... [more]
A0A1F3ZQQ8_9PROT1.910e-9746.95Chromosome partition protein Smc n=1 Tax=Betaprote... [more]
A0A1Y0BAJ9_9BACT2.900e-9749.66A109 n=1 Tax=uncultured bacterium TaxID=77133 RepI... [more]
A0A537ACU0_9PROT4.780e-9547.93Chromosome partition protein Smc n=1 Tax=Betaprote... [more]
A0A1F4EAK4_9PROT6.840e-9446.58Chromosome partition protein Smc n=2 Tax=unclassif... [more]
A0A1F4FHQ6_9PROT1.770e-9248.08Chromosome partition protein Smc n=1 Tax=Betaprote... [more]
A0A536WPX1_9PROT3.280e-9245.39Chromosome partition protein Smc n=2 Tax=Betaprote... [more]
A0A536SJD8_9PROT5.390e-9250.23Chromosome segregation protein SMC (Fragment) n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18527contigP-wetherbeei_contig18527:15..1346 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1304883.KI912532_gene2618
Preferred namesmc
PFAMsSMC_N,SMC_hinge
Model size1332
Max annot lvl206389|Rhodocyclales
KEGG koko:K03529
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.77e-56
EggNOG OGsCOG1196@1|root,COG1196@2|Bacteria,1MUAQ@1224|Proteobacteria,2VJMF@28216|Betaproteobacteria,2KV3S@206389|Rhodocyclales
DescriptionRequired for chromosome condensation and partitioning
Cds size1332
COG categoryD
BRITEko00000,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186148.5101507-CDS-P-wetherbeei_contig18527:14..13461683186148.5101507-CDS-P-wetherbeei_contig18527:14..1346Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig18527 15..1346 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18527.1.1prot_P-wetherbeei_contig18527.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig18527 15..1346 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig18527.1.1

>prot_P-wetherbeei_contig18527.1.1 ID=prot_P-wetherbeei_contig18527.1.1|Name=mRNA_P-wetherbeei_contig18527.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=444bp
LSGFAADNRPAKASFYLSASSVGTVSLAGHESLAGKVTASNPGVAGAIAD
WLSGVYVAKGMPDDGMRAALPPGASLINQDGHRFTRHTASFHAPDATDSG
LLLRQAEIDSLRSRCQDLAGVLETARGEVAAKEGDLASRQAALASARDAA
AELQGSSHEARIELLKLTQAADRYRERSGQIGAELQGIAIELDKASARKI
ELIAMLEGIRAEIATLHASLSEVRAAHTEAEVALTEQRRVLQQSERSSQE
AVFAERECVSKINEIDNSVKIIDQQIERADLDVAKLTEELAVDPIPVVRE
ALDAAVEARISCEKTLAEARNTVEAASATLRGLEESRLLIEGRIAPLRER
IGELRLKEQAASINHDQFAAQLAEAGADESALAAGAEGAPRPSALQSEIT
RLNQSISELGAVNLAALEELKTSSERKGFLDAQSADLEEAVHTL
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mRNA from alignment at P-wetherbeei_contig18527:15..1346+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig18527.1.1 ID=mRNA_P-wetherbeei_contig18527.1.1|Name=mRNA_P-wetherbeei_contig18527.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1332bp|location=Sequence derived from alignment at P-wetherbeei_contig18527:15..1346+ (Phaeothamnion wetherbeei SAG_119_79)
CTGTCCGGGTTCGCGGCCGACAACCGGCCTGCGAAGGCCAGCTTCTACCT GTCGGCATCCAGTGTGGGAACCGTATCGCTTGCCGGGCATGAGTCGCTCG CCGGCAAGGTGACCGCTTCCAATCCAGGAGTCGCCGGGGCGATCGCGGAC TGGCTTTCCGGCGTATACGTGGCGAAAGGGATGCCGGATGACGGCATGCG CGCCGCGCTTCCGCCCGGAGCATCCCTGATCAATCAGGACGGGCATCGGT TTACGCGCCACACGGCGAGCTTCCATGCCCCGGATGCGACCGATTCCGGC CTGCTCTTGCGGCAAGCGGAGATCGATTCGCTGCGCTCGCGCTGCCAGGA CTTGGCAGGAGTGCTCGAGACCGCGCGGGGGGAAGTCGCGGCAAAGGAGG GCGACCTCGCCTCCAGGCAGGCGGCGCTGGCTTCCGCGCGTGATGCTGCG GCCGAACTGCAGGGCAGCAGCCACGAGGCCAGGATTGAATTGCTCAAGCT GACGCAGGCTGCGGATCGATACCGCGAGCGCAGCGGGCAGATCGGGGCCG AGTTGCAGGGTATTGCTATCGAGCTCGACAAGGCCAGTGCCCGCAAGATC GAGCTGATCGCGATGCTGGAGGGTATCCGCGCCGAGATCGCAACACTTCA TGCATCCCTCTCCGAGGTCAGGGCGGCGCATACCGAGGCCGAGGTTGCAC TCACCGAACAGCGGCGCGTGCTGCAGCAGTCCGAACGTTCCTCCCAGGAG GCGGTTTTCGCCGAGCGGGAGTGCGTTTCCAAGATCAACGAGATCGACAA CTCGGTCAAGATCATCGACCAGCAGATCGAGCGGGCGGACCTGGACGTCG CAAAGCTCACGGAAGAACTCGCGGTCGACCCGATCCCGGTCGTTCGTGAA GCGCTGGACGCGGCAGTCGAGGCGCGAATAAGCTGTGAAAAGACCCTTGC GGAGGCGCGCAATACGGTCGAAGCCGCTTCTGCCACGCTACGCGGCCTCG AGGAATCCCGCCTGCTGATCGAGGGCCGCATCGCCCCCCTGCGCGAGCGG ATCGGGGAACTGCGCCTGAAAGAGCAGGCCGCGAGTATCAACCACGATCA GTTCGCCGCGCAGCTCGCGGAAGCCGGCGCGGACGAGTCGGCCTTGGCGG CGGGCGCCGAAGGCGCGCCGCGCCCTTCGGCCCTGCAGTCCGAAATCACT CGCCTGAACCAGTCAATCTCGGAACTTGGCGCGGTCAACCTTGCGGCGCT CGAGGAACTGAAGACCAGCTCGGAGCGCAAGGGATTCCTCGACGCCCAGT CGGCCGACCTGGAAGAGGCCGTGCACACGCTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig18527:15..1346+

>mRNA_P-wetherbeei_contig18527.1.1 ID=mRNA_P-wetherbeei_contig18527.1.1|Name=mRNA_P-wetherbeei_contig18527.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1332bp|location=Sequence derived from alignment at P-wetherbeei_contig18527:15..1346+ (Phaeothamnion wetherbeei SAG_119_79)
CTGTCCGGGTTCGCGGCCGACAACCGGCCTGCGAAGGCCAGCTTCTACCT
GTCGGCATCCAGTGTGGGAACCGTATCGCTTGCCGGGCATGAGTCGCTCG
CCGGCAAGGTGACCGCTTCCAATCCAGGAGTCGCCGGGGCGATCGCGGAC
TGGCTTTCCGGCGTATACGTGGCGAAAGGGATGCCGGATGACGGCATGCG
CGCCGCGCTTCCGCCCGGAGCATCCCTGATCAATCAGGACGGGCATCGGT
TTACGCGCCACACGGCGAGCTTCCATGCCCCGGATGCGACCGATTCCGGC
CTGCTCTTGCGGCAAGCGGAGATCGATTCGCTGCGCTCGCGCTGCCAGGA
CTTGGCAGGAGTGCTCGAGACCGCGCGGGGGGAAGTCGCGGCAAAGGAGG
GCGACCTCGCCTCCAGGCAGGCGGCGCTGGCTTCCGCGCGTGATGCTGCG
GCCGAACTGCAGGGCAGCAGCCACGAGGCCAGGATTGAATTGCTCAAGCT
GACGCAGGCTGCGGATCGATACCGCGAGCGCAGCGGGCAGATCGGGGCCG
AGTTGCAGGGTATTGCTATCGAGCTCGACAAGGCCAGTGCCCGCAAGATC
GAGCTGATCGCGATGCTGGAGGGTATCCGCGCCGAGATCGCAACACTTCA
TGCATCCCTCTCCGAGGTCAGGGCGGCGCATACCGAGGCCGAGGTTGCAC
TCACCGAACAGCGGCGCGTGCTGCAGCAGTCCGAACGTTCCTCCCAGGAG
GCGGTTTTCGCCGAGCGGGAGTGCGTTTCCAAGATCAACGAGATCGACAA
CTCGGTCAAGATCATCGACCAGCAGATCGAGCGGGCGGACCTGGACGTCG
CAAAGCTCACGGAAGAACTCGCGGTCGACCCGATCCCGGTCGTTCGTGAA
GCGCTGGACGCGGCAGTCGAGGCGCGAATAAGCTGTGAAAAGACCCTTGC
GGAGGCGCGCAATACGGTCGAAGCCGCTTCTGCCACGCTACGCGGCCTCG
AGGAATCCCGCCTGCTGATCGAGGGCCGCATCGCCCCCCTGCGCGAGCGG
ATCGGGGAACTGCGCCTGAAAGAGCAGGCCGCGAGTATCAACCACGATCA
GTTCGCCGCGCAGCTCGCGGAAGCCGGCGCGGACGAGTCGGCCTTGGCGG
CGGGCGCCGAAGGCGCGCCGCGCCCTTCGGCCCTGCAGTCCGAAATCACT
CGCCTGAACCAGTCAATCTCGGAACTTGGCGCGGTCAACCTTGCGGCGCT
CGAGGAACTGAAGACCAGCTCGGAGCGCAAGGGATTCCTCGACGCCCAGT
CGGCCGACCTGGAAGAGGCCGTGCACACGCTG
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