mRNA_P-wetherbeei_contig18471.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig18471.1.1
Unique NamemRNA_P-wetherbeei_contig18471.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig18471.1.1 vs. uniprot
Match: A0A3C2B4D2_9ACTN (Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C2B4D2_9ACTN)

HSP 1 Score: 354 bits (909), Expect = 2.450e-119
Identity = 187/248 (75.40%), Postives = 212/248 (85.48%), Query Frame = 1
Query:    4 SLPLPRGFRAHVTNVGVKDNTDDFVVVAADEPCVAAGVFTKSSFAGPSVLVSREHVADHRARAVVVLSKNANVATGAEGLANAHEVVAGVAISLGCAPHEVLIASTGVIGRQYPMDRIRTGLHSIPSPLPGNDAEAVARGIMTTDTVMKVATASC--GEATIVGVAKGVGMIEPDMATLITLMFTDAAIGADDLDRIFRGVIDRTFNCVSVDTDTSTSDTAIILANGAAGSIDLDDFEKTLHDVALSL 741
            +LPLP+GFRA+VTNVGVKD+TDDF VVAA++PC AAGVFTKSSFAGPSVLVSR HVAD RARA+VV+SKNANVATGA+GLA+A EVVAGVA SLGC  HEVL+ASTGVIGR YPMDRIR GL SIPSPLPG DA AVARGIMTTDTV K A A+   G AT+VGVAKGVGMIEPDMAT+I ++FTDA +   DLD +FR V+DRTFNCVSVDTDTSTSDTA++LA+G AG +D   FE+ L+ V  SL
Sbjct:    3 TLPLPQGFRAYVTNVGVKDSTDDFTVVAAEQPCSAAGVFTKSSFAGPSVLVSRRHVADGRARAMVVISKNANVATGAQGLADAEEVVAGVAASLGCTAHEVLVASTGVIGRTYPMDRIRAGLASIPSPLPGTDALAVARGIMTTDTVPKTAQATIADGPATVVGVAKGVGMIEPDMATMIAMVFTDADVSPSDLDVVFRRVVDRTFNCVSVDTDTSTSDTAVVLASGVAGPVDPSAFEQALYSVCSSL 250          
BLAST of mRNA_P-wetherbeei_contig18471.1.1 vs. uniprot
Match: A0A6I3EW87_9ACTN (Arginine biosynthesis bifunctional protein ArgJ n=2 Tax=root TaxID=1 RepID=A0A6I3EW87_9ACTN)

HSP 1 Score: 347 bits (889), Expect = 2.920e-116
Identity = 184/245 (75.10%), Postives = 206/245 (84.08%), Query Frame = 1
Query:    7 LPLPRGFRAHVTNVGVKDNTDDFVVVAADEPCVAAGVFTKSSFAGPSVLVSREHVADHRARAVVVLSKNANVATGAEGLANAHEVVAGVAISLGCAPHEVLIASTGVIGRQYPMDRIRTGLHSIPSPLPGNDAEAVARGIMTTDTVMKVATASCGEATIVGVAKGVGMIEPDMATLITLMFTDAAIGADDLDRIFRGVIDRTFNCVSVDTDTSTSDTAIILANGAAGSIDLDDFEKTLHDVALSL 741
            LPLPRGF A+VTNVGVKDNTDDF +VAAD PC  AGVFTKSSFAGPSV+VSR HV+   ARA+VVLSKNANVATGA GLA+AHEVVAGVA +L CA  ++LIASTGVIGR+YPMDRIR GL +IP+PLPG DA AVARGIMTTDTV K A+A  G+  IVGVAKGVGMIEPDMAT+I + FTDAA+ A  LD  FR VIDRTFNCVSVDTDTSTSDTA+ILA+GAAG ID+ +F   L+ VA SL
Sbjct:    5 LPLPRGFHAYVTNVGVKDNTDDFTIVAADAPCTTAGVFTKSSFAGPSVIVSRAHVSSGTARAIVVLSKNANVATGAAGLADAHEVVAGVAATLDCAATDILIASTGVIGRRYPMDRIRAGLAAIPTPLPGTDAGAVARGIMTTDTVPKTASAVVGDVRIVGVAKGVGMIEPDMATMIAMFFTDAALDATTLDAAFRSVIDRTFNCVSVDTDTSTSDTAVILASGAAGPIDVAEFTAGLYAVAESL 249          
BLAST of mRNA_P-wetherbeei_contig18471.1.1 vs. uniprot
Match: A0A7K1B6A1_9ACTN (Arginine biosynthesis bifunctional protein ArgJ n=2 Tax=root TaxID=1 RepID=A0A7K1B6A1_9ACTN)

HSP 1 Score: 344 bits (882), Expect = 2.500e-115
Identity = 183/245 (74.69%), Postives = 205/245 (83.67%), Query Frame = 1
Query:    7 LPLPRGFRAHVTNVGVKDNTDDFVVVAADEPCVAAGVFTKSSFAGPSVLVSREHVADHRARAVVVLSKNANVATGAEGLANAHEVVAGVAISLGCAPHEVLIASTGVIGRQYPMDRIRTGLHSIPSPLPGNDAEAVARGIMTTDTVMKVATASCGEATIVGVAKGVGMIEPDMATLITLMFTDAAIGADDLDRIFRGVIDRTFNCVSVDTDTSTSDTAIILANGAAGSIDLDDFEKTLHDVALSL 741
            +PLP GFR HV NVG+KD+TDDFVVV AD PC AAG+FT+SSFAGPSVLVSR +VADHRA+AVVV+SKNANVATG EGLANA EVVAGVA  LG    +VLIASTGVIGRQYPMDR+R+GL ++P+   G DA AVA GIMTTDTVMK A AS G A +VGVAKGVGMIEPDMATLITL+FTDA +  D LD +FR VIDRTFNCVSVDTDTSTSDTAI+LA+GAAG++D    E  L DVALSL
Sbjct:    1 MPLPDGFRCHVANVGIKDDTDDFVVVVADRPCAAAGLFTRSSFAGPSVLVSRRNVADHRAQAVVVISKNANVATGPEGLANAEEVVAGVAARLGLDATDVLIASTGVIGRQYPMDRVRSGLAALPAHPAGTDARAVATGIMTTDTVMKTAEASAGVARVVGVAKGVGMIEPDMATLITLLFTDADVAPDALDAMFRRVIDRTFNCVSVDTDTSTSDTAIVLASGAAGAVDAAALEAALFDVALSL 245          
BLAST of mRNA_P-wetherbeei_contig18471.1.1 vs. uniprot
Match: A0A3C1L2G2_9ACTN (Arginine biosynthesis bifunctional protein ArgJ n=2 Tax=Actinobacteria TaxID=201174 RepID=A0A3C1L2G2_9ACTN)

HSP 1 Score: 342 bits (876), Expect = 2.400e-114
Identity = 180/245 (73.47%), Postives = 204/245 (83.27%), Query Frame = 1
Query:    7 LPLPRGFRAHVTNVGVKDNTDDFVVVAADEPCVAAGVFTKSSFAGPSVLVSREHVADHRARAVVVLSKNANVATGAEGLANAHEVVAGVAISLGCAPHEVLIASTGVIGRQYPMDRIRTGLHSIPSPLPGNDAEAVARGIMTTDTVMKVATASCGEATIVGVAKGVGMIEPDMATLITLMFTDAAIGADDLDRIFRGVIDRTFNCVSVDTDTSTSDTAIILANGAAGSIDLDDFEKTLHDVALSL 741
            L LPRGF AHV N+GVKD TDDF +VA+D PC AAGVFT+SSFAGPSVLVSR HVA   ARA+VV+SKNANVATGA+GLA+AHEVVAGVA +LGC+P +VLIASTGVIGR YPMD IR GL +IPSPLPG DA  VARGIMTTDTV K A+A+ G A IVGVAKGVGMIEP+MAT+I + FTDAA+ A  LD +FR VIDRT NCVS+DTDTSTSDTA+I+ANG AG++D D FE  L  VA SL
Sbjct:    5 LALPRGFHAHVANIGVKDTTDDFTIVASDVPCAAAGVFTQSSFAGPSVLVSRLHVAHGTARAMVVISKNANVATGAQGLADAHEVVAGVAAALGCSPTDVLIASTGVIGRSYPMDHIRAGLAAIPSPLPGTDAGQVARGIMTTDTVPKTASATVGNARIVGVAKGVGMIEPNMATMIAMFFTDAALSAPALDAVFRRVIDRTLNCVSIDTDTSTSDTAVIIANGVAGTVDDDAFEAALCSVAESL 249          
BLAST of mRNA_P-wetherbeei_contig18471.1.1 vs. uniprot
Match: A0A7K0VJK1_9ACTN (Ornithine acetyltransferase (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7K0VJK1_9ACTN)

HSP 1 Score: 331 bits (848), Expect = 9.740e-112
Identity = 180/249 (72.29%), Postives = 200/249 (80.32%), Query Frame = 1
Query:    1 MSLPLPRGFRAHVTNVGVKDNTDDFVVVAADEPCVAAGVFTKSSFAGPSVLVSREHVADHRARAVVVLSKNANVATGAEGLANAHEVVAGVAISLGCAPHEVLIASTGVIGRQYPMDRIRTGLHSIPSPLPGNDAEAVARGIMTTDTVMKVATA--SCGEATIVGVAKGVGMIEPDMATLITLMFTDAAIGADDLDRIFRGVIDRTFNCVSVDTDTSTSDTAIILANGAAGSIDLDDFEKTLHDVALSL 741
            MSL LP GF  HV N+GVKD + DFVVVAAD  C AA VFT+S F+GPSV+VSR ++A HRAR VVV+SKNANVATG +GLANAHE+VAGVA +LGC  HEV IASTGVIGRQYPMDRIR GL ++  P  GNDA AVA GIMTTDTV KVA+A  S   A +VGVAKGVGMIEP+MATLITLMFTDA I    LD IFR VIDRTFNCVSVDTDTSTSDTAI+LA+G AGS+D+  FE  L  VALSL
Sbjct:    1 MSLSLPLGFSCHVANIGVKDTSTDFVVVAADHTCAAAAVFTQSRFSGPSVVVSRANIAQHRARGVVVISKNANVATGQQGLANAHEIVAGVASALGCPAHEVQIASTGVIGRQYPMDRIRAGLSALALPFTGNDAHAVATGIMTTDTVEKVASATISGSSAVVVGVAKGVGMIEPNMATLITLMFTDADIDPASLDTIFRRVIDRTFNCVSVDTDTSTSDTAIVLASGVAGSVDITAFEAALFHVALSL 249          
BLAST of mRNA_P-wetherbeei_contig18471.1.1 vs. uniprot
Match: A0A539E794_9ACTN (Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A539E794_9ACTN)

HSP 1 Score: 333 bits (855), Expect = 4.030e-111
Identity = 178/245 (72.65%), Postives = 204/245 (83.27%), Query Frame = 1
Query:    7 LPLPRGFRAHVTNVGVKDNTDDFVVVAADEPCVAAGVFTKSSFAGPSVLVSREHVADHRARAVVVLSKNANVATGAEGLANAHEVVAGVAISLGCAPHEVLIASTGVIGRQYPMDRIRTGLHSIPSPLPGNDAEAVARGIMTTDTVMKVATASCGEATIVGVAKGVGMIEPDMATLITLMFTDAAIGADDLDRIFRGVIDRTFNCVSVDTDTSTSDTAIILANGAAGSIDLDDFEKTLHDVALSL 741
            LPLPRGF  HV+NVG+KD TDDFVVVAAD+PC AAG+FT SSFAGPSV+VSR ++AD  A+AVVV+SKNANVATGA GLA+  EVVA VA  LG  P +VLIASTGVIGR+YPMDR+R G+ ++P+ L   DA  VARGIMTTDTVMK A A  G A IVGVAKGVGMIEP+MATLITL FTDAA+ AD LDR+FR VI RTFNCVS+DTDTSTSDTAII+A+GAAG +D   FE+ LH+VALSL
Sbjct:    9 LPLPRGFSCHVSNVGIKDATDDFVVVAADDPCAAAGLFTTSSFAGPSVVVSRANIADQTAQAVVVISKNANVATGAGGLADTEEVVAAVAGRLGFRPSDVLIASTGVIGRRYPMDRLRAGIAALPAALTDFDATDVARGIMTTDTVMKTAAAQLGAARIVGVAKGVGMIEPNMATLITLFFTDAAVDADKLDRVFRRVIGRTFNCVSIDTDTSTSDTAIIMASGAAGRVDGHRFEQALHEVALSL 253          
BLAST of mRNA_P-wetherbeei_contig18471.1.1 vs. uniprot
Match: A0A6I3WP71_9ACTN (Arginine biosynthesis bifunctional protein ArgJ n=2 Tax=root TaxID=1 RepID=A0A6I3WP71_9ACTN)

HSP 1 Score: 332 bits (852), Expect = 1.150e-110
Identity = 178/245 (72.65%), Postives = 203/245 (82.86%), Query Frame = 1
Query:   13 LPRGFRAHVTNVGVKDNTDDFVVVAADEPCVAAGVFTKSSFAGPSVLVSREHVADHRARAVVVLSKNANVATGAEGLANAHEVVAGVAISLGCAPHEVLIASTGVIGRQYPMDRIRTGLHSIPSPLPGNDAEAVARGIMTTDTVMKVATASCG--EATIVGVAKGVGMIEPDMATLITLMFTDAAIGADDLDRIFRGVIDRTFNCVSVDTDTSTSDTAIILANGAAGSIDLDDFEKTLHDVALSL 741
            LP GF  HV N+G+KD T+DFVVVAAD PC AA VFT+S FAGPSVLVSR+H+ADH ARAVVV+SKNANVATG +GL+NA+EVVAGVA +LGCAP +VLIASTGVIGRQYPMD +R GL ++  P  G  A  VA GIMTTDTV KVATA+    +A +VGVAKGVGMIEP+MATLITLMFTDA I A  LD IFR VI RTFNCVS+DTDTSTSDTAI+LA+G+AG++DL  FE  LHDVALSL
Sbjct:    9 LPAGFHCHVANIGIKDATNDFVVVAADGPCAAAAVFTQSRFAGPSVLVSRDHIADHSARAVVVISKNANVATGPQGLSNANEVVAGVAAALGCAPSDVLIASTGVIGRQYPMDHVRAGLAALTPPFTGTAAIDVATGIMTTDTVAKVATAAVAGSDAVVVGVAKGVGMIEPNMATLITLMFTDAQIDAHVLDAIFRRVIGRTFNCVSIDTDTSTSDTAIVLASGSAGAVDLVAFEAALHDVALSL 253          
BLAST of mRNA_P-wetherbeei_contig18471.1.1 vs. uniprot
Match: A0A6I2WDU8_9ACTN (Arginine biosynthesis bifunctional protein ArgJ n=7 Tax=root TaxID=1 RepID=A0A6I2WDU8_9ACTN)

HSP 1 Score: 323 bits (827), Expect = 6.190e-107
Identity = 170/249 (68.27%), Postives = 205/249 (82.33%), Query Frame = 1
Query:    1 MSLPLPRGFRAHVTNVGVKDNTDDFVVVAADEPCVAAGVFTKSSFAGPSVLVSREHVADHRARAVVVLSKNANVATGAEGLANAHEVVAGVAISLGCAPHEVLIASTGVIGRQYPMDRIRTGLHSIPSPLPGNDAEAVARGIMTTDTVMKVA--TASCGEATIVGVAKGVGMIEPDMATLITLMFTDAAIGADDLDRIFRGVIDRTFNCVSVDTDTSTSDTAIILANGAAGSIDLDDFEKTLHDVALSL 741
            M++ LP GF +HV N+G+KD+TDDF +V ADE C AAGVFT+S FAGPSV+VSREH+A   ARAVVV+SKNANVATGAEG++NA EVV GVA +L C P ++LIASTGVIGRQYPM ++R+GL SIP       AEAVA+GIMTTDTV KVA  T S   A +VGVAKGVGMIEP+MATLIT++FTDA I + DLD++FR VIDRTFNCVSVDTDTSTSDTAI++A+G AG++ +D FE  L++VALSL
Sbjct:    1 MTVQLPLGFYSHVANIGIKDSTDDFTLVVADETCAAAGVFTQSRFAGPSVVVSREHIASLSARAVVVISKNANVATGAEGMSNAREVVVGVATALACDPTDILIASTGVIGRQYPMAQVRSGLKSIPQQFVATSAEAVAKGIMTTDTVHKVAQATISGSSARVVGVAKGVGMIEPNMATLITMIFTDALIESADLDQVFRRVIDRTFNCVSVDTDTSTSDTAIVMASGIAGAVKIDAFEAALYEVALSL 249          
BLAST of mRNA_P-wetherbeei_contig18471.1.1 vs. uniprot
Match: A0A7K1CAJ4_9ACTN (Arginine biosynthesis bifunctional protein ArgJ n=2 Tax=root TaxID=1 RepID=A0A7K1CAJ4_9ACTN)

HSP 1 Score: 322 bits (825), Expect = 1.210e-106
Identity = 173/247 (70.04%), Postives = 202/247 (81.78%), Query Frame = 1
Query:    7 LPLPRGFRAHVTNVGVKDNTDDFVVVAADEPCVAAGVFTKSSFAGPSVLVSREHVADHRARAVVVLSKNANVATGAEGLANAHEVVAGVAISLGCAPHEVLIASTGVIGRQYPMDRIRTGLHSIPSPLPGNDAEAVARGIMTTDTVMKVATASC--GEATIVGVAKGVGMIEPDMATLITLMFTDAAIGADDLDRIFRGVIDRTFNCVSVDTDTSTSDTAIILANGAAGSIDLDDFEKTLHDVALSL 741
            + LP GF + VTNVG+KD TDDF VVAAD+   AAGVFT+S FAGPSV+VSR+H+ D RARAVVV+SKNANVATG +G+ NA EVV GVA  LGC PH+VLIASTGVIGRQYP+DR+R GL ++P PLP +DA+AVARGIMTTDTV K+A A+   G A +VGVAKGVGMIEP+MATLITL+FTDA +    LD ++R VIDRTFNCVSVDTDTSTSDTAI+LA+GAAGS+D    E  L DVA SL
Sbjct:    2 VALPTGFTSFVTNVGIKDATDDFTVVAADDVVSAAGVFTRSRFAGPSVVVSRKHLVDRRARAVVVISKNANVATGEQGMDNALEVVRGVAARLGCDPHDVLIASTGVIGRQYPIDRVRAGLSALPFPLPDHDADAVARGIMTTDTVPKMAEATVAGGNARVVGVAKGVGMIEPNMATLITLVFTDALVDGTTLDAVWRRVIDRTFNCVSVDTDTSTSDTAIVLASGAAGSVDEGALEAALEDVARSL 248          
BLAST of mRNA_P-wetherbeei_contig18471.1.1 vs. uniprot
Match: A0A6N2DLS8_9ACTN (Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A6N2DLS8_9ACTN)

HSP 1 Score: 318 bits (814), Expect = 5.960e-105
Identity = 168/248 (67.74%), Postives = 199/248 (80.24%), Query Frame = 1
Query:   10 PLPRGFRAHVTNVGVKDNTDDFVVVAADEPCVAAGVFTKSSFAGPSVLVSREHVADHRARAVVVLSKNANVATGAEGLANAHEVVAGVAISLGCAPHEVLIASTGVIGRQYPMDRIRTGLHSIPSPLPGN--DAEAVARGIMTTDTVMKVATAS--CGEATIVGVAKGVGMIEPDMATLITLMFTDAAIGADDLDRIFRGVIDRTFNCVSVDTDTSTSDTAIILANGAAGSIDLDDFEKTLHDVALSL 741
            PLP GF  HV N+GVKD+TDD VV+A + P  AAG+FT S FAGPSV +SREH+ADHRARAVVV+SKNANVA GA G+A+A E+   VA  LGC P +V++ASTGVIGR YPMD IR GL +IP+ L G   DA+  ARGIMTTDTV K ATA+   G A +VG+AKGVGMIEPDMATLIT++ TDA + ADDLD +FR VIDRTFNCVS+DTDTSTSDTA++LA+GAAG +DL+ FE  LH+VALSL
Sbjct:    3 PLPHGFSCHVANIGVKDDTDDLVVIATERPVAAAGMFTTSRFAGPSVTLSREHLADHRARAVVVISKNANVANGARGIADARELSERVAQRLGCDPTDVVVASTGVIGRPYPMDDIRAGLDAIPTALRGATADADRAARGIMTTDTVPKTATATIGAGPARVVGIAKGVGMIEPDMATLITVLLTDAEVPADDLDLVFRRVIDRTFNCVSIDTDTSTSDTAVVLASGAAGPVDLEQFEVALHEVALSL 250          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18471.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C2B4D2_9ACTN2.450e-11975.40Arginine biosynthesis bifunctional protein ArgJ n=... [more]
A0A6I3EW87_9ACTN2.920e-11675.10Arginine biosynthesis bifunctional protein ArgJ n=... [more]
A0A7K1B6A1_9ACTN2.500e-11574.69Arginine biosynthesis bifunctional protein ArgJ n=... [more]
A0A3C1L2G2_9ACTN2.400e-11473.47Arginine biosynthesis bifunctional protein ArgJ n=... [more]
A0A7K0VJK1_9ACTN9.740e-11272.29Ornithine acetyltransferase (Fragment) n=1 Tax=Act... [more]
A0A539E794_9ACTN4.030e-11172.65Arginine biosynthesis bifunctional protein ArgJ n=... [more]
A0A6I3WP71_9ACTN1.150e-11072.65Arginine biosynthesis bifunctional protein ArgJ n=... [more]
A0A6I2WDU8_9ACTN6.190e-10768.27Arginine biosynthesis bifunctional protein ArgJ n=... [more]
A0A7K1CAJ4_9ACTN1.210e-10670.04Arginine biosynthesis bifunctional protein ArgJ n=... [more]
A0A6N2DLS8_9ACTN5.960e-10567.74Arginine biosynthesis bifunctional protein ArgJ n=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18471contigP-wetherbeei_contig18471:6..746 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1313172.YM304_29730
Preferred nameargJ
PFAMsArgJ
Model size741
Max annot lvl84992|Acidimicrobiia
KEGG rclassRC00004,RC00064
KEGG koko:K00620
KEGG ReactionR00259,R02282
KEGG Pathwayko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230
KEGG ModuleM00028
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.32e-93
EggNOG OGsCOG1364@1|root,COG1364@2|Bacteria,2GIW0@201174|Actinobacteria,4CN30@84992|Acidimicrobiia
EC2.3.1.1,2.3.1.35
DescriptionCatalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
Cds size741
COG categoryE
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186147.042586-CDS-P-wetherbeei_contig18471:5..7461683186147.042586-CDS-P-wetherbeei_contig18471:5..746Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig18471 6..746 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18471.1.1prot_P-wetherbeei_contig18471.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig18471 6..746 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig18471.1.1

>prot_P-wetherbeei_contig18471.1.1 ID=prot_P-wetherbeei_contig18471.1.1|Name=mRNA_P-wetherbeei_contig18471.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=247bp
MSLPLPRGFRAHVTNVGVKDNTDDFVVVAADEPCVAAGVFTKSSFAGPSV
LVSREHVADHRARAVVVLSKNANVATGAEGLANAHEVVAGVAISLGCAPH
EVLIASTGVIGRQYPMDRIRTGLHSIPSPLPGNDAEAVARGIMTTDTVMK
VATASCGEATIVGVAKGVGMIEPDMATLITLMFTDAAIGADDLDRIFRGV
IDRTFNCVSVDTDTSTSDTAIILANGAAGSIDLDDFEKTLHDVALSL
back to top

mRNA from alignment at P-wetherbeei_contig18471:6..746-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig18471.1.1 ID=mRNA_P-wetherbeei_contig18471.1.1|Name=mRNA_P-wetherbeei_contig18471.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=741bp|location=Sequence derived from alignment at P-wetherbeei_contig18471:6..746- (Phaeothamnion wetherbeei SAG_119_79)
ATGTCGCTCCCCCTCCCCCGCGGCTTTCGCGCGCACGTCACCAACGTCGG CGTGAAGGACAACACCGACGACTTCGTCGTCGTCGCCGCGGACGAGCCCT GCGTGGCCGCAGGGGTGTTCACCAAGAGCAGCTTCGCCGGACCGAGCGTG CTGGTCAGCCGCGAGCACGTCGCCGATCACCGCGCCCGCGCGGTGGTGGT GCTGTCGAAGAACGCCAACGTCGCCACCGGCGCCGAGGGTCTGGCAAACG CCCACGAGGTGGTTGCCGGCGTCGCCATCTCGTTGGGTTGCGCGCCCCAC GAGGTGCTCATTGCCTCCACCGGCGTCATCGGTCGCCAGTACCCGATGGA TCGCATCCGCACCGGACTGCACTCGATCCCCTCGCCACTGCCGGGCAACG ATGCCGAGGCCGTCGCCCGCGGGATCATGACCACCGACACGGTGATGAAG GTGGCCACCGCCTCGTGCGGTGAGGCGACGATCGTCGGCGTCGCCAAGGG CGTGGGCATGATCGAGCCGGACATGGCGACGTTGATCACGCTGATGTTCA CCGACGCGGCCATCGGCGCCGACGACCTGGATCGCATCTTCCGCGGTGTG ATCGACCGCACGTTCAACTGCGTCTCGGTGGACACCGACACGAGCACCAG CGACACGGCGATCATCCTCGCCAACGGTGCCGCCGGATCGATCGACCTCG ACGACTTCGAGAAGACGCTGCACGACGTCGCCCTGTCGCTG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig18471:6..746-

>mRNA_P-wetherbeei_contig18471.1.1 ID=mRNA_P-wetherbeei_contig18471.1.1|Name=mRNA_P-wetherbeei_contig18471.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=741bp|location=Sequence derived from alignment at P-wetherbeei_contig18471:6..746- (Phaeothamnion wetherbeei SAG_119_79)
ATGTCGCTCCCCCTCCCCCGCGGCTTTCGCGCGCACGTCACCAACGTCGG
CGTGAAGGACAACACCGACGACTTCGTCGTCGTCGCCGCGGACGAGCCCT
GCGTGGCCGCAGGGGTGTTCACCAAGAGCAGCTTCGCCGGACCGAGCGTG
CTGGTCAGCCGCGAGCACGTCGCCGATCACCGCGCCCGCGCGGTGGTGGT
GCTGTCGAAGAACGCCAACGTCGCCACCGGCGCCGAGGGTCTGGCAAACG
CCCACGAGGTGGTTGCCGGCGTCGCCATCTCGTTGGGTTGCGCGCCCCAC
GAGGTGCTCATTGCCTCCACCGGCGTCATCGGTCGCCAGTACCCGATGGA
TCGCATCCGCACCGGACTGCACTCGATCCCCTCGCCACTGCCGGGCAACG
ATGCCGAGGCCGTCGCCCGCGGGATCATGACCACCGACACGGTGATGAAG
GTGGCCACCGCCTCGTGCGGTGAGGCGACGATCGTCGGCGTCGCCAAGGG
CGTGGGCATGATCGAGCCGGACATGGCGACGTTGATCACGCTGATGTTCA
CCGACGCGGCCATCGGCGCCGACGACCTGGATCGCATCTTCCGCGGTGTG
ATCGACCGCACGTTCAACTGCGTCTCGGTGGACACCGACACGAGCACCAG
CGACACGGCGATCATCCTCGCCAACGGTGCCGCCGGATCGATCGACCTCG
ACGACTTCGAGAAGACGCTGCACGACGTCGCCCTGTCGCTG
back to top