mRNA_P-wetherbeei_contig1845.6.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1845.6.1
Unique NamemRNA_P-wetherbeei_contig1845.6.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1845.6.1 vs. uniprot
Match: UPI0019B116F1 (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI0019B116F1)

HSP 1 Score: 433 bits (1113), Expect = 3.600e-150
Identity = 211/301 (70.10%), Postives = 256/301 (85.05%), Query Frame = 1
Query:   28 AQAWPAKAVRIIVPFPPGGGLDFYARTVAPRLQEYLGQQVVVENRSGAGGMVGADVVAKAAPDGYTMLLSSSAELTISQHLYPKMAYDAIRDFAPVSYASHAAMLYSVHPSLPAKTLQEVIGLARAQPGKLSFASAGTGGVQHLAGEILKTAAKVDIVHVPYKGAGPAVIDMVGGQVQMGFTALPSSIQHARAGRLRPIAVTSVKRSEAAPELPTFTELGFPSIDLVVWYAALFPARTPPEIVAKMSADLNRATSSPDIKARLLEQGVEAVGTTPDQLGKFMQSEATRYGKIIRDTGAKPD 930
            AQ+WP + VRI+VPFPPGGGLDF+AR V+PRLQE LGQ +++ENRSGAGGMVGA+ VA+AAPDG+T+L +SSAE+TI+QHLYPK+AYDA RDFAPVSYA+HAAM+ SVHPS+P K+LQE+I LARA+PG+L++AS G+GG+QHL GE+ K  AK+DIVHVPYKGAGPAVIDMVGG V MG TALPSSIQ ARAGRLRP+AVT+ KRS  APEL TF E GFP +DLVVWY  L PA TP +IV ++S ++NR   S D+ A+LL+QGVE+VGTTP+Q  KF+QSE  RYG II+ +GAKPD
Sbjct:   26 AQSWPNRPVRIVVPFPPGGGLDFFARAVSPRLQEALGQTLIIENRSGAGGMVGAESVARAAPDGHTVLFASSAEITINQHLYPKIAYDASRDFAPVSYAAHAAMMLSVHPSVPVKSLQELIALARARPGQLAYASPGSGGIQHLTGELFKALAKIDIVHVPYKGAGPAVIDMVGGHVAMGVTALPSSIQQARAGRLRPLAVTTRKRSAVAPELATFAEQGFPDLDLVVWYGVLLPAGTPADIVGRLSTEINRTVQSADVSAKLLQQGVESVGTTPEQFAKFIQSEIVRYGGIIKASGAKPD 326          
BLAST of mRNA_P-wetherbeei_contig1845.6.1 vs. uniprot
Match: A0A7C2YN92_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7C2YN92_9PROT)

HSP 1 Score: 314 bits (805), Expect = 2.030e-103
Identity = 150/301 (49.83%), Postives = 215/301 (71.43%), Query Frame = 1
Query:   22 ALAQAWPAKAVRIIVPFPPGGGLDFYARTVAPRLQEYLGQQVVVENRSGAGGMVGADVVAKAAPDGYTMLLSSSAELTISQHLYPKMAYDAIRDFAPVSYASHAAMLYSVHPSLPAKTLQEVIGLARAQPGKLSFASAGTGGVQHLAGEILKTAAKVDIVHVPYKGAGPAVIDMVGGQVQMGFTALPSSIQHARAGRLRPIAVTSVKRSEAAPELPTFTELGFPSIDLVVWYAALFPARTPPEIVAKMSADLNRATSSPDIKARLLEQGVEAVGTTPDQLGKFMQSEATRYGKIIRDTGAK 924
            A AQ +P K +R++VP+ PGG  D  AR V  ++Q  L Q V+V+NR GAGG++GAD+VAK+ PDGYT+L+   AE+ I  HL  K+ Y   RDFAPVS A+   ++  VHPSLP +T++E++   RA+PG+LS+ASAGTGGVQHLA E+LK  AK+D+ HVPYKGAGP + D++GG + + F+ +P ++ H +AG+LRP+AVT++KRS AAP++PT  E G P  D+  W+A   PA TP EIV +++ ++ R    PD+K +L   G E VGTTP++L  F++SE  ++ K+I+ +GAK
Sbjct:   23 AWAQGYPVKPIRVVVPYAPGGATDLTARLVGQKMQAALKQNVIVDNRPGAGGVIGADIVAKSPPDGYTVLIGVPAEMAILPHLQ-KLPYSVARDFAPVSLAAVTPLILVVHPSLPVRTVKELVAFVRARPGQLSYASAGTGGVQHLAAELLKITAKIDMTHVPYKGAGPVMPDLIGGHIPLFFSGMPPAMPHVKAGKLRPLAVTTLKRSPAAPDVPTMVEAGVPGFDISNWFAYFVPAGTPAEIVTRLNTEIVRGLGFPDVKEKLASVGAETVGTTPEELATFVRSETDKFAKLIKASGAK 322          
BLAST of mRNA_P-wetherbeei_contig1845.6.1 vs. uniprot
Match: A0A1F4DXY8_9PROT (LacI family transcriptional regulator n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58 TaxID=1797497 RepID=A0A1F4DXY8_9PROT)

HSP 1 Score: 312 bits (800), Expect = 1.050e-102
Identity = 150/301 (49.83%), Postives = 220/301 (73.09%), Query Frame = 1
Query:   22 ALAQAWPAKAVRIIVPFPPGGGLDFYARTVAPRLQEYLGQQVVVENRSGAGGMVGADVVAKAAPDGYTMLLSSSAELTISQHLYPKMAYDAIRDFAPVSYASHAAMLYSVHPSLPAKTLQEVIGLARAQPGKLSFASAGTGGVQHLAGEILKTAAKVDIVHVPYKGAGPAVIDMVGGQVQMGFTALPSSIQHARAGRLRPIAVTSVKRSEAAPELPTFTELGFPSIDLVVWYAALFPARTPPEIVAKMSADLNRATSSPDIKARLLEQGVEAVGTTPDQLGKFMQSEATRYGKIIRDTGAK 924
            A AQA+PAK++R++VP+ PGG  D  AR V  ++ +   Q VV++NR+GAGG++GAD+VA+AAPDGYT+LL+S AE+ +  HL  KM Y+  +DFAPVS AS   ++  +HPS+P K+++ +I   +A+PG++++ASAGTGGVQHLAGE+LK   K+D+VHVPYKGAGP + D++GG V M F+ +P ++ H +AG+LR +AVTS  RS AAP +PT  E G P      W+A   PA TP  +++ ++A++NRA    D+K RL   G+E VGTTP++L KF++SE+ ++ ++IR +GAK
Sbjct:   20 AAAQAYPAKSIRVVVPYAPGGATDLTARLVGQKMNDSFRQTVVIDNRTGAGGVIGADIVARAAPDGYTVLLASPAEIAVLPHLQ-KMPYNVDKDFAPVSLASTTPLILVLHPSVPVKSVKALIAFVKARPGQMTYASAGTGGVQHLAGELLKITFKLDMVHVPYKGAGPVMPDLIGGHVPMFFSGMPPAMPHVKAGKLRALAVTSTTRSPAAPNVPTMAEAGVPDFVFTNWFAYFVPAGTPAGVISTLNAEINRALKLEDVKTRLATVGLETVGTTPEELAKFVRSESDKFAQLIRQSGAK 319          
BLAST of mRNA_P-wetherbeei_contig1845.6.1 vs. uniprot
Match: A0A537DFE8_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537DFE8_9PROT)

HSP 1 Score: 310 bits (795), Expect = 5.620e-102
Identity = 150/301 (49.83%), Postives = 212/301 (70.43%), Query Frame = 1
Query:   28 AQAWPAKAVRIIVPFPPGGGLDFYARTVAPRLQEYLGQQVVVENRSGAGGMVGADVVAKAAPDGYTMLLSSSAELTISQHLYPKMAYDAIRDFAPVSYASHAAMLYSVHPSLPAKTLQEVIGLARAQPGKLSFASAGTGGVQHLAGEILKTAAKVDIVHVPYKGAGPAVIDMVGGQVQMGFTALPSSIQHARAGRLRPIAVTSVKRSEAAPELPTFTELGFPSIDLVVWYAALFPARTPPEIVAKMSADLNRATSSPDIKARLLEQGVEAVGTTPDQLGKFMQSEATRYGKIIRDTGAKPD 930
            A  +P K VRI+VPF  GG  D  AR V  +L     Q +V++NR GA GM+GA++VAKA PDGYT+LL+S AE+ I+Q LY +M YD ++D APV+ A    ++  VHPS+ A++++E+IGLA+A+PG+ +FAS G G VQHL+GE++KT A+VDI HVPYKG  PAV D+VGGQ+ M F  +P  + H +AGRLR +AVT  +RS AAPE+PT  E G P  D+  W+    PA TP  ++AK++++++R  +  D+K RL EQG+E VG + +Q   F ++E  +Y KIIR++GA+PD
Sbjct:   20 AAQYPGKPVRIVVPFSAGGTTDILARAVGQKLTAAWSQPIVIDNRPGASGMIGAEMVAKAPPDGYTVLLASVAEVAINQSLYARMTYDPLKDLAPVTLAGFTPLILVVHPSVQARSVKELIGLAKAKPGRFTFASPGNGSVQHLSGELMKTVARVDITHVPYKGGAPAVTDLVGGQISMFFAGMPIVMPHVKAGRLRALAVTVTRRSPAAPEVPTMEEAGVPGFDISNWFGVYVPAATPKAVIAKLNSEMSRVLNLADVKERLAEQGLETVGNSVEQFDAFFRAEILKYDKIIRESGARPD 320          
BLAST of mRNA_P-wetherbeei_contig1845.6.1 vs. uniprot
Match: UPI00198D557E (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI00198D557E)

HSP 1 Score: 309 bits (791), Expect = 2.770e-101
Identity = 148/301 (49.17%), Postives = 219/301 (72.76%), Query Frame = 1
Query:   22 ALAQAWPAKAVRIIVPFPPGGGLDFYARTVAPRLQEYLGQQVVVENRSGAGGMVGADVVAKAAPDGYTMLLSSSAELTISQHLYPKMAYDAIRDFAPVSYASHAAMLYSVHPSLPAKTLQEVIGLARAQPGKLSFASAGTGGVQHLAGEILKTAAKVDIVHVPYKGAGPAVIDMVGGQVQMGFTALPSSIQHARAGRLRPIAVTSVKRSEAAPELPTFTELGFPSIDLVVWYAALFPARTPPEIVAKMSADLNRATSSPDIKARLLEQGVEAVGTTPDQLGKFMQSEATRYGKIIRDTGAK 924
            ALAQ +PAK +R+IVPF PGGG D   RT++ ++ + L Q VVVENR+GAGG++GA+ VAKA PDGYT+L+ + AE+ I  H+  KM YD +RDFAPVS A+ + ++  VHPSLP K+ +++I LAR +PG L+F SAGTGGV HLA E+LK + K+D+VHVPYKG G  + D+VGG + + F+++P S+    +G+LR + + + KRS AAP++PT +E+G P + +  W+A   PA TPP IV ++S ++NR    PD++ +LL  G++ +GTTP++LG+F++ E+ +YGK I+  G +
Sbjct:   25 ALAQEFPAKPIRLIVPFAPGGGTDITGRTISAKMADTLKQPVVVENRTGAGGVIGAEFVAKAPPDGYTVLIGTPAEIAILPHMQ-KMPYDPLRDFAPVSLATSSPLILVVHPSLPVKSAKDLIALARTRPGLLTFGSAGTGGVHHLAAELLKFSYKLDMVHVPYKGVGAVIPDLVGGHISLTFSSMPPSMPFVASGKLRAVGIAAPKRSAAAPQVPTLSEVGAPDLFVSNWFAYFVPAATPPAIVGRLSGEINRTLKMPDVREKLLALGLDTLGTTPEELGRFVREESEKYGKTIKAAGIR 324          
BLAST of mRNA_P-wetherbeei_contig1845.6.1 vs. uniprot
Match: A0A536Y7I4_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536Y7I4_9PROT)

HSP 1 Score: 303 bits (777), Expect = 3.200e-99
Identity = 146/305 (47.87%), Postives = 212/305 (69.51%), Query Frame = 1
Query:   16 APALAQAWPAKAVRIIVPFPPGGGLDFYARTVAPRLQEYLGQQVVVENRSGAGGMVGADVVAKAAPDGYTMLLSSSAELTISQHLYPKMAYDAIRDFAPVSYASHAAMLYSVHPSLPAKTLQEVIGLARAQPGKLSFASAGTGGVQHLAGEILKTAAKVDIVHVPYKGAGPAVIDMVGGQVQMGFTALPSSIQHARAGRLRPIAVTSVKRSEAAPELPTFTELGFPSIDLVVWYAALFPARTPPEIVAKMSADLNRATSSPDIKARLLEQGVEAVGTTPDQLGKFMQSEATRYGKIIRDTGAKPD 930
            APA AQ +PA+ +R+IV +PPGGG D   R +A +L E LGQ VVVENR GA G +G ++ A AAPDGYT+L+ + A   I+  L+  + +D + DFAPVS  +    +  VHPS P +T++E+I LA+A+PG L+FASAG G   HLAGE+ +  A  +IVHVPYKGAGPA++D++ GQVQ+ F  +P+++ H ++G+L P+AVTS +RS A P L T  E G P  +   WY AL PA TPP ++A++ A++ +  + P ++ARL +QG E VG +P++ G +++SE T++GK IRD G +P+
Sbjct:   18 APAHAQVYPARPLRMIVAYPPGGGTDIVGRMLAQKLGESLGQSVVVENRGGASGNIGTELAAHAAPDGYTILMGNVAPNAINVSLFKDLPFDPVADFAPVSLVASTPNILVVHPSTPVRTVRELIALAKAKPGSLNFASAGVGSSSHLAGELFRILAGAEIVHVPYKGAGPAMVDVLSGQVQLYFATMPAAMPHVKSGKLAPVAVTSARRSHALPGLATIAESGVPGYEASTWYGALAPAHTPPAVIARLHAEIAKILADPALRARLADQGFEPVGNSPEEFGAYIKSEITKWGKAIRDAGIRPE 322          
BLAST of mRNA_P-wetherbeei_contig1845.6.1 vs. uniprot
Match: Q12GU3_POLSJ (Uncharacterized protein UPF0065 n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) TaxID=296591 RepID=Q12GU3_POLSJ)

HSP 1 Score: 300 bits (768), Expect = 7.610e-98
Identity = 150/306 (49.02%), Postives = 207/306 (67.65%), Query Frame = 1
Query:   13 AAPALAQAWPAKAVRIIVPFPPGGGLDFYARTVAPRLQEYLGQQVVVENRSGAGGMVGADVVAKAAPDGYTMLLSSSAELTISQHLYPKMAYDAIRDFAPVSYASHAAMLYSVHPSLPAKTLQEVIGLARAQPGKLSFASAGTGGVQHLAGEILKTAAKVDIVHVPYKGAGPAVIDMVGGQVQMGFTALPSSIQHARAGRLRPIAVTSVKRSEAAPELPTFTELGFPSIDLVVWYAALFPARTPPEIVAKMSADLNRATSSPDIKARLLEQGVEAVGTTPDQLGKFMQSEATRYGKIIRDTGAKPD 930
            AA ALAQ++P +A+RI+VP+PPGGG D  AR +A  L E  GQ VV+EN  GA GM+GAD+VAKA PDGYT+++S+SAE+ ++  L+PKMAYD +RDFAP++ A+   M   VHPS+P  +L+E I LA+A+PG + F S G G   H AGE LK   + DIVHVPYKG+GP +ID++GG    GF  L  ++QH ++G+LR +AVT+ KR    P++P   E   P  D+  W A   PA TP +++ K+SA++ R   SPD KAR+ EQG EA+G +P +L  F ++E  +Y KI +    K D
Sbjct:   18 AATALAQSYPNRAIRIVVPYPPGGGADITARPIAQMLSERWGQPVVIENHGGASGMIGADIVAKAPPDGYTIMVSASAEVALNVALFPKMAYDPVRDFAPITLATVTPMALVVHPSVPITSLKEYIALAKAKPGSMKFGSVGAGTPHHFAGEWLKMLTQTDIVHVPYKGSGPLIIDLLGGHSPSGFATLLPAMQHVKSGKLRALAVTTQKRVPQLPDVPALAET-LPGFDITQWNAVWAPAATPKDVLDKLSAEIARIVQSPDYKARMAEQGSEAIGNSPSELAAFQKAEIDKYRKIAQQANMKAD 322          
BLAST of mRNA_P-wetherbeei_contig1845.6.1 vs. uniprot
Match: A0A1F4DWR9_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58 TaxID=1797497 RepID=A0A1F4DWR9_9PROT)

HSP 1 Score: 299 bits (765), Expect = 2.550e-97
Identity = 143/300 (47.67%), Postives = 207/300 (69.00%), Query Frame = 1
Query:   31 QAWPAKAVRIIVPFPPGGGLDFYARTVAPRLQEYLGQQVVVENRSGAGGMVGADVVAKAAPDGYTMLLSSSAELTISQHLYPKMAYDAIRDFAPVSYASHAAMLYSVHPSLPAKTLQEVIGLARAQPGKLSFASAGTGGVQHLAGEILKTAAKVDIVHVPYKGAGPAVIDMVGGQVQMGFTALPSSIQHARAGRLRPIAVTSVKRSEAAPELPTFTELGFPSIDLVVWYAALFPARTPPEIVAKMSADLNRATSSPDIKARLLEQGVEAVGTTPDQLGKFMQSEATRYGKIIRDTGAKPD 930
            QA+P K +R+I PFPPGG  D  AR VA +L E  GQQVVV+NR GAGG++G ++VAKAAPDGYT+LL S     ++  LY K+ +D ++DFAPVS    +  L +VHPS+ AK+++E+I LA+A+PG+L++ASAGTG   HL  E+ K+ A +D+VHVPYKG GPA+ D++GGQVQM  T + + + H ++G+LR + VTS KR  A P+LPT  E G P  D+  W+    P  TP  IVAKM+A++ +    P+++ RL+ QG +    TP++   ++++E  ++GK+ RDTG + D
Sbjct:   29 QAYPTKPIRMICPFPPGGTTDVVARLVAQKLTEAWGQQVVVDNRPGAGGIIGTEIVAKAAPDGYTVLLGSITTHAVNPALYKKLNFDPVKDFAPVSLVVSSPQLLAVHPSVAAKSVKELIALAKAKPGQLNYASAGTGTSPHLTFELFKSMAGIDVVHVPYKGTGPAITDLIGGQVQMMITGVVALMPHIKSGKLRGLGVTSAKRVAALPDLPTIAESGIPGFDVSSWFGVFLPGGTPKPIVAKMNAEIRKILEVPEVRQRLISQGADPASNTPEEFAAYVKAEMAKWGKVARDTGTRAD 328          
BLAST of mRNA_P-wetherbeei_contig1845.6.1 vs. uniprot
Match: A0A1F4DDX1_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58 TaxID=1797497 RepID=A0A1F4DDX1_9PROT)

HSP 1 Score: 297 bits (761), Expect = 9.010e-97
Identity = 145/301 (48.17%), Postives = 200/301 (66.45%), Query Frame = 1
Query:   28 AQAWPAKAVRIIVPFPPGGGLDFYARTVAPRLQEYLGQQVVVENRSGAGGMVGADVVAKAAPDGYTMLLSSSAELTISQHLYPKMAYDAIRDFAPVSYASHAAMLYSVHPSLPAKTLQEVIGLARAQPGKLSFASAGTGGVQHLAGEILKTAAKVDIVHVPYKGAGPAVIDMVGGQVQMGFTALPSSIQHARAGRLRPIAVTSVKRSEAAPELPTFTELGFPSIDLVVWYAALFPARTPPEIVAKMSADLNRATSSPDIKARLLEQGVEAVGTTPDQLGKFMQSEATRYGKIIRDTGAKPD 930
            AQ +P KA+RI+VP+PPGGG D  AR +A +L E  GQ VV++NR GA GM+GAD+VAKA PDGYT+++S+SAE  ++  L+PKM YD +RDFAP++ A    M   VHPS+P K+++E I  ARA+PG ++F SAG G   H AGE LK   K+DIVHVPYKG GPA+ID++GG +  GF  L  ++QH + G+LR +AVT+ KR    P++P   E   P  D+  W A   PA  P +++ K+  ++ R   SPD KAR+ +Q  EA+G +P +L  F Q+E  +Y KI +    K D
Sbjct:   24 AQTYPNKAIRIVVPYPPGGGADMTARPIAQKLSERWGQPVVIDNRGGASGMIGADIVAKAPPDGYTLMVSASAEAALNVALFPKMPYDPVRDFAPITLAIVIPMALVVHPSVPIKSVKEYIAFARAKPGSMTFGSAGAGSTHHFAGEWLKMLTKIDIVHVPYKGMGPAIIDLLGGHLPSGFATLLPALQHVKTGKLRALAVTTQKRVPLLPDVPALAET-LPGFDVTQWNAVWAPAAMPKDVLDKLGTEITRIVQSPDYKARMTDQAAEAIGNSPSELAAFQQAEIDKYRKIAQQANIKVD 323          
BLAST of mRNA_P-wetherbeei_contig1845.6.1 vs. uniprot
Match: A0A536XPA0_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=5 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536XPA0_9PROT)

HSP 1 Score: 297 bits (761), Expect = 9.620e-97
Identity = 148/305 (48.52%), Postives = 213/305 (69.84%), Query Frame = 1
Query:   16 APALAQAWPAKAVRIIVPFPPGGGLDFYARTVAPRLQEYLGQQVVVENRSGAGGMVGADVVAKAAPDGYTMLLSSSAELTISQHLYPKMAYDAIRDFAPVSYASHAAMLYSVHPSLPAKTLQEVIGLARAQPGKLSFASAGTGGVQHLAGEILKTAAKVDIVHVPYKGAGPAVIDMVGGQVQMGFTALPSSIQHARAGRLRPIAVTSVKRSEAAPELPTFTELGFPSIDLVVWYAALFPARTPPEIVAKMSADLNRATSSPDIKARLLEQGVEAVGTTPDQLGKFMQSEATRYGKIIRDTGAKPD 930
            A A A A+P+K VR +V FPPGGG D  AR++A RL   L QQVVV+NR GAGG +G D+VAK+APDG+T+L+ S+  L I+  L+ KM +D IRD APV+ A+    +  VHPSL A T++E+I LA+A+PG+++FAS+G G   HLAGE+  + A V +VHVPYKGA PA+ D++GGQVQ+ F+ +P ++ H + G+LR +AVTS KRS A PELPT  E+  P  +   W+  + PA TP  IVA+++ ++      P++  RL  QG EAVG+TP++   +++SE  ++ K++RD+GAK +
Sbjct:   22 AAAAADAYPSKPVRFVVAFPPGGGTDIIARSIAQRLTVRLAQQVVVDNRPGAGGNIGTDIVAKSAPDGHTLLMGSAGPLAINASLFGKMPFDPIRDLAPVTLAASTPNVLVVHPSLRAATVRELIALAKARPGEINFASSGHGTPAHLAGELFNSMAGVKMVHVPYKGAAPALADLLGGQVQLMFSTMPPALPHVKDGKLRALAVTSAKRSPATPELPTVDEIALPGFEANTWHGVVVPAGTPAAIVARLNREIVAILHLPEVVERLSAQGAEAVGSTPEEFAAYIRSETAKWAKVVRDSGAKAE 326          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1845.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0019B116F13.600e-15070.10Tripartite tricarboxylate transporter substrate bi... [more]
A0A7C2YN92_9PROT2.030e-10349.83Tripartite tricarboxylate transporter substrate bi... [more]
A0A1F4DXY8_9PROT1.050e-10249.83LacI family transcriptional regulator n=1 Tax=Beta... [more]
A0A537DFE8_9PROT5.620e-10249.83Tripartite tricarboxylate transporter substrate bi... [more]
UPI00198D557E2.770e-10149.17Tripartite tricarboxylate transporter substrate bi... [more]
A0A536Y7I4_9PROT3.200e-9947.87Tripartite tricarboxylate transporter substrate bi... [more]
Q12GU3_POLSJ7.610e-9849.02Uncharacterized protein UPF0065 n=1 Tax=Polaromona... [more]
A0A1F4DWR9_9PROT2.550e-9747.67Uncharacterized protein n=1 Tax=Betaproteobacteria... [more]
A0A1F4DDX1_9PROT9.010e-9748.17Uncharacterized protein n=1 Tax=Betaproteobacteria... [more]
A0A536XPA0_9PROT9.620e-9748.52Tripartite tricarboxylate transporter substrate bi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1845contigP-wetherbeei_contig1845:4503..5435 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog296591.Bpro_0284
PFAMsTctC
Model size933
Max annot lvl28216|Betaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.25e-98
EggNOG OGsCOG3181@1|root,COG3181@2|Bacteria,1MU58@1224|Proteobacteria,2VHK8@28216|Betaproteobacteria,4A9R8@80864|Comamonadaceae
DescriptionPFAM conserved
Cds size933
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186146.3198464-CDS-P-wetherbeei_contig1845:4502..54351683186146.3198464-CDS-P-wetherbeei_contig1845:4502..5435Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1845 4503..5435 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1845.6.1prot_P-wetherbeei_contig1845.6.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1845 4503..5435 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1845.6.1

>prot_P-wetherbeei_contig1845.6.1 ID=prot_P-wetherbeei_contig1845.6.1|Name=mRNA_P-wetherbeei_contig1845.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=311bp
LGAPAAPALAQAWPAKAVRIIVPFPPGGGLDFYARTVAPRLQEYLGQQVV
VENRSGAGGMVGADVVAKAAPDGYTMLLSSSAELTISQHLYPKMAYDAIR
DFAPVSYASHAAMLYSVHPSLPAKTLQEVIGLARAQPGKLSFASAGTGGV
QHLAGEILKTAAKVDIVHVPYKGAGPAVIDMVGGQVQMGFTALPSSIQHA
RAGRLRPIAVTSVKRSEAAPELPTFTELGFPSIDLVVWYAALFPARTPPE
IVAKMSADLNRATSSPDIKARLLEQGVEAVGTTPDQLGKFMQSEATRYGK
IIRDTGAKPD*
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mRNA from alignment at P-wetherbeei_contig1845:4503..5435-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1845.6.1 ID=mRNA_P-wetherbeei_contig1845.6.1|Name=mRNA_P-wetherbeei_contig1845.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=933bp|location=Sequence derived from alignment at P-wetherbeei_contig1845:4503..5435- (Phaeothamnion wetherbeei SAG_119_79)
CTCGGCGCGCCGGCCGCGCCGGCCCTTGCGCAGGCCTGGCCCGCCAAGGC CGTGCGCATCATCGTGCCCTTCCCGCCCGGCGGCGGGCTCGACTTCTACG CGCGCACCGTGGCCCCGCGGCTGCAGGAGTACCTCGGCCAGCAGGTGGTG GTCGAGAACCGCTCCGGCGCCGGCGGCATGGTCGGCGCGGACGTCGTGGC CAAGGCCGCGCCCGACGGCTACACGATGCTGCTGTCGTCCTCCGCCGAGC TGACGATCAGCCAGCACCTGTACCCGAAGATGGCCTACGACGCGATCCGC GATTTCGCGCCGGTCTCCTACGCCTCGCACGCCGCGATGCTGTACTCGGT CCATCCCTCGCTGCCCGCGAAGACGCTGCAAGAAGTCATCGGGCTCGCGC GCGCGCAGCCCGGCAAGCTCTCGTTCGCCTCGGCCGGCACCGGCGGCGTC CAGCATCTCGCTGGCGAGATCCTCAAGACCGCCGCCAAGGTGGACATCGT CCACGTGCCCTACAAGGGCGCCGGCCCGGCGGTCATCGACATGGTGGGTG GGCAGGTGCAGATGGGCTTCACCGCGCTGCCCTCATCGATCCAGCATGCG CGCGCGGGGCGACTGCGCCCCATCGCCGTGACCAGCGTCAAGCGCAGCGA GGCCGCCCCGGAACTGCCCACGTTCACCGAACTCGGTTTCCCGTCGATCG ACCTCGTCGTCTGGTATGCCGCGCTGTTCCCCGCCCGCACGCCGCCGGAG ATCGTCGCGAAGATGAGCGCCGACCTCAACCGCGCCACGAGCTCGCCCGA CATCAAGGCGCGGCTCCTCGAGCAGGGCGTCGAGGCCGTGGGCACCACGC CCGACCAGCTCGGCAAGTTCATGCAATCGGAGGCGACGCGCTACGGCAAG ATCATCCGCGATACCGGGGCGAAGCCGGATTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1845:4503..5435-

>mRNA_P-wetherbeei_contig1845.6.1 ID=mRNA_P-wetherbeei_contig1845.6.1|Name=mRNA_P-wetherbeei_contig1845.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=933bp|location=Sequence derived from alignment at P-wetherbeei_contig1845:4503..5435- (Phaeothamnion wetherbeei SAG_119_79)
CTCGGCGCGCCGGCCGCGCCGGCCCTTGCGCAGGCCTGGCCCGCCAAGGC
CGTGCGCATCATCGTGCCCTTCCCGCCCGGCGGCGGGCTCGACTTCTACG
CGCGCACCGTGGCCCCGCGGCTGCAGGAGTACCTCGGCCAGCAGGTGGTG
GTCGAGAACCGCTCCGGCGCCGGCGGCATGGTCGGCGCGGACGTCGTGGC
CAAGGCCGCGCCCGACGGCTACACGATGCTGCTGTCGTCCTCCGCCGAGC
TGACGATCAGCCAGCACCTGTACCCGAAGATGGCCTACGACGCGATCCGC
GATTTCGCGCCGGTCTCCTACGCCTCGCACGCCGCGATGCTGTACTCGGT
CCATCCCTCGCTGCCCGCGAAGACGCTGCAAGAAGTCATCGGGCTCGCGC
GCGCGCAGCCCGGCAAGCTCTCGTTCGCCTCGGCCGGCACCGGCGGCGTC
CAGCATCTCGCTGGCGAGATCCTCAAGACCGCCGCCAAGGTGGACATCGT
CCACGTGCCCTACAAGGGCGCCGGCCCGGCGGTCATCGACATGGTGGGTG
GGCAGGTGCAGATGGGCTTCACCGCGCTGCCCTCATCGATCCAGCATGCG
CGCGCGGGGCGACTGCGCCCCATCGCCGTGACCAGCGTCAAGCGCAGCGA
GGCCGCCCCGGAACTGCCCACGTTCACCGAACTCGGTTTCCCGTCGATCG
ACCTCGTCGTCTGGTATGCCGCGCTGTTCCCCGCCCGCACGCCGCCGGAG
ATCGTCGCGAAGATGAGCGCCGACCTCAACCGCGCCACGAGCTCGCCCGA
CATCAAGGCGCGGCTCCTCGAGCAGGGCGTCGAGGCCGTGGGCACCACGC
CCGACCAGCTCGGCAAGTTCATGCAATCGGAGGCGACGCGCTACGGCAAG
ATCATCCGCGATACCGGGGCGAAGCCGGATTGA
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