mRNA_P-wetherbeei_contig1844.2.7 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1844.2.7 vs. uniprot
Match: A0A5Q2RN89_9ACTN (HNH endonuclease n=1 Tax=Actinomarinicola tropica TaxID=2789776 RepID=A0A5Q2RN89_9ACTN) HSP 1 Score: 107 bits (268), Expect = 9.100e-24 Identity = 59/151 (39.07%), Postives = 78/151 (51.66%), Query Frame = 1
Query: 349 RVLVLNVTFVALNIVKAPRALQLLSAQKADVVETEGEIIRSPSAEVEVPSVIALRRYVKVKKPGAPTLRKTATRTERCINLFDSEESVPPDCFVFPGHNRLLHSLLKIFNRDNSTCQYCGSAAQSVDHIIPRSQGGGHHWHNMVACCLKCN 801
R LVLN +F L +V A RA+ L+ A KAD++ G ++RS + VPSVI LR YV V P L + A +F+RD CQYCGSAA+S+DH++PRS+GG H W N+VA C +CN
Sbjct: 3 RALVLNASFEPLGVVAARRAVVLVLADKADLLHGSGAVVRSERMSLPVPSVIRLRHYVHVPYPRHTALTRRA-----------------------------------VFHRDAHLCQYCGSAAESIDHVVPRSRGGAHVWENVVAACRRCN 118
BLAST of mRNA_P-wetherbeei_contig1844.2.7 vs. uniprot
Match: A0A7V9C5Q1_9ACTN (HNH endonuclease n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7V9C5Q1_9ACTN) HSP 1 Score: 107 bits (267), Expect = 1.030e-23 Identity = 58/151 (38.41%), Postives = 80/151 (52.98%), Query Frame = 1
Query: 349 RVLVLNVTFVALNIVKAPRALQLLSAQKADVVETEGEIIRSPSAEVEVPSVIALRRYVKVKKPGAPTLRKTATRTERCINLFDSEESVPPDCFVFPGHNRLLHSLLKIFNRDNSTCQYCGSAAQSVDHIIPRSQGGGHHWHNMVACCLKCN 801
R LVLN T+ L++V A RA+ L+ ++A+VVE+ G I S V PSVI LRRYVKV+ L + A +F RD+ +CQYCG A+++DH++PR+QGGGH W N+VA C +CN
Sbjct: 3 RALVLNATYEPLSVVSARRAVVLVVRERAEVVESNGHIYHSEHLAVSAPSVIKLRRYVKVRFDRRTPLNRRA-----------------------------------VFLRDDHSCQYCGQPAENLDHVVPRAQGGGHTWDNVVAACRRCN 118
BLAST of mRNA_P-wetherbeei_contig1844.2.7 vs. uniprot
Match: A0A6G0A5Y7_9ACTN (HNH endonuclease n=2 Tax=Bacteria TaxID=2 RepID=A0A6G0A5Y7_9ACTN) HSP 1 Score: 104 bits (259), Expect = 1.550e-22 Identity = 58/150 (38.67%), Postives = 79/150 (52.67%), Query Frame = 1
Query: 355 LVLNVTFVALNIVKAPRALQLLSAQKADVVETEGEIIRSPSAEVEVPSVIALRRYVKVK-KPGAPTLRKTATRTERCINLFDSEESVPPDCFVFPGHNRLLHSLLKIFNRDNSTCQYCGSAAQSVDHIIPRSQGGGHHWHNMVACCLKCN 801
LVLN + L++V RAL L+ A KADV+ GE++RS + +PSV+ LR YV+V + GA R+T +F RD TCQYCGS A+S+DH++PRS+GG H W N+VA C +CN
Sbjct: 5 LVLNASQEPLSVVPTRRALLLVLADKADVLHHNGEVVRSERLTIHMPSVVRLRYYVRVPFRRGAALNRRT------------------------------------VFLRDRHTCQYCGSTAESIDHVVPRSRGGSHSWDNVVAACRRCN 118
BLAST of mRNA_P-wetherbeei_contig1844.2.7 vs. uniprot
Match: A0A7Y3DFW5_9ACTN (HNH endonuclease n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7Y3DFW5_9ACTN) HSP 1 Score: 103 bits (258), Expect = 1.970e-22 Identity = 78/257 (30.35%), Postives = 108/257 (42.02%), Query Frame = 1
Query: 346 LRVLVLNVTFVALNIVKAPRALQLLSAQKADVVETEGEIIRSPSAEVEVPSVIALRRYVKVKKPGAPTLRKTATRTERCINLFDSEESVPPDCFVFPGHNRLLHSLLKIFNRDNSTCQYCGSAAQSVDHIIPRSQGGGHHWHNMVACCLKCNQVCWIPYYARHRLGSIYVLLRRGSPYAALLFLSHLRYVGLPFSCTSACCPRIHPTPNQAKGARSPEQAGMRLRSKPVAPPGAALGLRLPRGGQLPYSRWGAYLSG 1116
+R L+LN T+ L+IV A RA+ L+ QKA V+E G + RS + V +PSVI L YVKV P R+ + +F RD +CQYCG+ A+++DH++PRS+GG H W N+VA C +CN LR+G+ R+P +AGM LRS+P AP G L G P+ W YL+G
Sbjct: 1 MRALILNATYEPLSIVSARRAVILVLRQKAIVLEESGTVWRSERSSVALPSVIRLNTYVKV-----------------------------------PYARRIALNRRAVFARDRHSCQYCGTGAENLDHVLPRSRGGAHTWENVVAACRRCN-------------------LRKGN--------------------------------------RTPAEAGMPLRSEPTAP--RRHGWVLVNLGAPPHPSWQPYLAG 163
BLAST of mRNA_P-wetherbeei_contig1844.2.7 vs. uniprot
Match: A0A7W0P4Z8_9ACTN (HNH endonuclease n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7W0P4Z8_9ACTN) HSP 1 Score: 103 bits (257), Expect = 2.430e-22 Identity = 60/152 (39.47%), Postives = 80/152 (52.63%), Query Frame = 1
Query: 349 RVLVLNVTFVALNIVKAPRALQLLSAQKADVVETEGEIIRSPSAEVEVPSVIALRRYVKVK-KPGAPTLRKTATRTERCINLFDSEESVPPDCFVFPGHNRLLHSLLKIFNRDNSTCQYCGSAAQSVDHIIPRSQGGGHHWHNMVACCLKCN 801
R LVLN + L +V A RA+ ++ +KADVV + G + S +E PSV+ LRRYV V +P AP R+ +F RD STCQYCG+AA+++DH+IPRS+GG H W N+VA C KCN
Sbjct: 3 RALVLNASESPLAVVAARRAVVMVLKEKADVVISNGLVFHSAHLTIEAPSVVRLRRYVHVPYRPHAPLTRRA------------------------------------VFARDLSTCQYCGAAAENLDHVIPRSRGGLHSWENVVASCRKCN 118
BLAST of mRNA_P-wetherbeei_contig1844.2.7 vs. uniprot
Match: A0A4U6QPQ6_9ACTN (HNH endonuclease n=2 Tax=Nakamurella flava TaxID=2576308 RepID=A0A4U6QPQ6_9ACTN) HSP 1 Score: 103 bits (257), Expect = 3.440e-22 Identity = 55/153 (35.95%), Postives = 80/153 (52.29%), Query Frame = 1
Query: 346 LRVLVLNVTFVALNIVKAPRALQLLSAQKAD-VVETEGEIIRSPSAEVEVPSVIALRRYVKVKKPGAPTLRKTATRTERCINLFDSEESVPPDCFVFPGHNRLLHSLLKIFNRDNSTCQYCGSAAQSVDHIIPRSQGGGHHWHNMVACCLKCN 801
+R L+LN + L++V RA+ L+ A KA+ V+E +G ++ SPSA++ VP+V+ LRRYV+V P + + + RD C YCG ++VDHI+PRS+GGGH W N VACCL+CN
Sbjct: 9 VRALLLNASHEPLSVVPGRRAVVLVVAGKAECVLERDGPVLHSPSAQMAVPAVVRLRRYVRVPFQPPPAVTRAG-----------------------------------VLRRDGRRCAYCGGRGETVDHIVPRSRGGGHSWENCVACCLRCN 126
BLAST of mRNA_P-wetherbeei_contig1844.2.7 vs. uniprot
Match: A0A381RY46_9ZZZZ (HNHc domain-containing protein (Fragment) n=4 Tax=root TaxID=1 RepID=A0A381RY46_9ZZZZ) HSP 1 Score: 103 bits (256), Expect = 4.140e-22 Identity = 54/149 (36.24%), Postives = 76/149 (51.01%), Query Frame = 1
Query: 355 LVLNVTFVALNIVKAPRALQLLSAQKADVVETEGEIIRSPSAEVEVPSVIALRRYVKVKKPGAPTLRKTATRTERCINLFDSEESVPPDCFVFPGHNRLLHSLLKIFNRDNSTCQYCGSAAQSVDHIIPRSQGGGHHWHNMVACCLKCN 801
L+LN T+ L+IV RA+ L+ ++A++V G ++RS E++ PSV+ L RYV V P H R S + +RD CQYCGS A+SVDH++PRS+GG H W N+VA C +CN
Sbjct: 5 LILNATYEPLSIVSTRRAVVLVLGERAEMVHATGRVVRSELLEIDEPSVVRLSRYVHV-----------------------------------PRHRRRGFSRRAVLHRDEHRCQYCGSQAESVDHVVPRSRGGAHDWENVVAACRRCN 118
BLAST of mRNA_P-wetherbeei_contig1844.2.7 vs. uniprot
Match: A0A6N8ZYT5_9ACTN (HNH endonuclease n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6N8ZYT5_9ACTN) HSP 1 Score: 102 bits (255), Expect = 5.530e-22 Identity = 56/151 (37.09%), Postives = 78/151 (51.66%), Query Frame = 1
Query: 349 RVLVLNVTFVALNIVKAPRALQLLSAQKADVVETEGEIIRSPSAEVEVPSVIALRRYVKVKKPGAPTLRKTATRTERCINLFDSEESVPPDCFVFPGHNRLLHSLLKIFNRDNSTCQYCGSAAQSVDHIIPRSQGGGHHWHNMVACCLKCN 801
R L+LN T+ L+IV A RA+ L+ KA V + ++ +S E VPSV+ LR YVKV P H R+ + +F RD+ CQYC S A+S+DH++P+S+GGGH W N+VACC +CN
Sbjct: 4 RALILNATYEPLSIVSARRAMVLVLRSKAVTVASSHDVWKSIDQEFAVPSVVRLRNYVKV-----------------------------------PYHRRVPLTRTAVFARDHHRCQYCRSPAESLDHVVPKSRGGGHTWENVVACCRRCN 119
BLAST of mRNA_P-wetherbeei_contig1844.2.7 vs. uniprot
Match: A0A7W1KTQ2_9ACTN (HNH endonuclease n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7W1KTQ2_9ACTN) HSP 1 Score: 102 bits (254), Expect = 6.130e-22 Identity = 59/152 (38.82%), Postives = 80/152 (52.63%), Query Frame = 1
Query: 349 RVLVLNVTFVALNIVKAPRALQLLSAQKADVVETEGEIIRSPSAEVEVPSVIALRRYVKVK-KPGAPTLRKTATRTERCINLFDSEESVPPDCFVFPGHNRLLHSLLKIFNRDNSTCQYCGSAAQSVDHIIPRSQGGGHHWHNMVACCLKCN 801
R LVLNVT + L +V A RA+ L+ +KA+VV + G I S +E PSV+ LRRYV+V +P AP R+ +F RD CQYCGS A+++DH++PRS+GG H W N+VA C +CN
Sbjct: 3 RALVLNVTDLPLAVVPARRAVVLVLKEKAEVVMSNGMIFHSERLVLEAPSVVRLRRYVRVPYRPHAPLTRRA------------------------------------VFARDEWACQYCGSTAENLDHVVPRSRGGLHVWENVVAACRRCN 118
BLAST of mRNA_P-wetherbeei_contig1844.2.7 vs. uniprot
Match: A0A2D6L2Y7_9ACTN (HNH endonuclease n=4 Tax=Actinobacteria TaxID=201174 RepID=A0A2D6L2Y7_9ACTN) HSP 1 Score: 101 bits (252), Expect = 1.320e-21 Identity = 57/150 (38.00%), Postives = 77/150 (51.33%), Query Frame = 1
Query: 352 VLVLNVTFVALNIVKAPRALQLLSAQKADVVETEGEIIRSPSAEVEVPSVIALRRYVKVKKPGAPTLRKTATRTERCINLFDSEESVPPDCFVFPGHNRLLHSLLKIFNRDNSTCQYCGSAAQSVDHIIPRSQGGGHHWHNMVACCLKCN 801
VLVLN +F L++V A RA L+ A KA+++E+ E++RSPS + VP V+ LR VK P R + S +F RD+ CQYCG+ A S+DHI+PRS+GG H W N+VA C CN
Sbjct: 4 VLVLNASFEPLSVVSARRATCLVLADKAEIIESGEELVRSPSFAMNVPLVVRLRYMVKA-----------------------------------PRQRRAVLSRRAVFARDDYQCQYCGAHADSIDHIVPRSRGGHHSWENLVAACKPCN 118 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1844.2.7 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1844.2.7 >prot_P-wetherbeei_contig1844.2.7 ID=prot_P-wetherbeei_contig1844.2.7|Name=mRNA_P-wetherbeei_contig1844.2.7|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=271bp MRNPSQQHLRVLVLNVTFVALNIVKAPRALQLLSAQKADVVETEGEIIRSback to top mRNA from alignment at P-wetherbeei_contig1844:1546..4038- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1844.2.7 ID=mRNA_P-wetherbeei_contig1844.2.7|Name=mRNA_P-wetherbeei_contig1844.2.7|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2493bp|location=Sequence derived from alignment at P-wetherbeei_contig1844:1546..4038- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1844:1546..4038- >mRNA_P-wetherbeei_contig1844.2.7 ID=mRNA_P-wetherbeei_contig1844.2.7|Name=mRNA_P-wetherbeei_contig1844.2.7|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=813bp|location=Sequence derived from alignment at P-wetherbeei_contig1844:1546..4038- (Phaeothamnion wetherbeei SAG_119_79)back to top |