mRNA_P-wetherbeei_contig18417.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig18417.2.1 vs. uniprot
Match: A0A7X9KM41_9ACTN (DEAD/DEAH box helicase (Fragment) n=2 Tax=Actinobacteria TaxID=201174 RepID=A0A7X9KM41_9ACTN) HSP 1 Score: 241 bits (614), Expect = 9.900e-79 Identity = 123/156 (78.85%), Postives = 133/156 (85.26%), Query Frame = 1
Query: 1 MADHSVLQAFSPAVREWFANSFPEPTPAQVTGWPAIIGRGHTLVCAPTGSGKTLTAFLASIDRLCT-TPPPEDPKARTRVLYLSPLRALAFDVEKNLRSPLMGIQLAAERLGVSFQQPIVAMRTGDTSSSDRQKLIRRPPDLLITTPESLYLMLTS 465
MADH VL+ FSPAVREWFA SFP PTP Q+ GWPAI HTLVCAPTGSGKTLTAFL+S+DRL T + P DPKART+VLY+SPLRALAFD+EKNLRSPLMGI+LAAERLGV F +P VAMRTGDTS DRQ L RRP DLLITTPESLYLMLTS
Sbjct: 1 MADHPVLEGFSPAVREWFAASFPTPTPPQIQGWPAIRSGQHTLVCAPTGSGKTLTAFLSSLDRLVTPSATPVDPKARTQVLYISPLRALAFDIEKNLRSPLMGIRLAAERLGVPFVEPTVAMRTGDTSPKDRQALARRPVDLLITTPESLYLMLTS 156
BLAST of mRNA_P-wetherbeei_contig18417.2.1 vs. uniprot
Match: A0A3C2B998_9ACTN (DEAD/DEAH box helicase (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C2B998_9ACTN) HSP 1 Score: 243 bits (619), Expect = 2.520e-74 Identity = 126/155 (81.29%), Postives = 131/155 (84.52%), Query Frame = 1
Query: 1 MADHSVLQAFSPAVREWFANSFPEPTPAQVTGWPAIIGRGHTLVCAPTGSGKTLTAFLASIDRLCTTPPPEDPKARTRVLYLSPLRALAFDVEKNLRSPLMGIQLAAERLGVSFQQPIVAMRTGDTSSSDRQKLIRRPPDLLITTPESLYLMLTS 465
MADH VL FSPAVREWF SFP PTP QV GWPAI HTLVCAPTGSGKTLTAFL+SIDRL TTPPP D KARTRVLY+SPLRALAFDVEKNLRSPLMGI+LAAERL V F +P VAMRTGDTS+ DR L RRP DLLITTPESLYLMLTS
Sbjct: 1 MADHPVLHGFSPAVREWFGASFPGPTPPQVQGWPAIRNGDHTLVCAPTGSGKTLTAFLSSIDRLVTTPPP-DAKARTRVLYISPLRALAFDVEKNLRSPLMGIRLAAERLDVPFLEPTVAMRTGDTSTKDRAALARRPVDLLITTPESLYLMLTS 154
BLAST of mRNA_P-wetherbeei_contig18417.2.1 vs. uniprot
Match: A0A6I3WWQ7_9ACTN (DEAD/DEAH box helicase n=2 Tax=root TaxID=1 RepID=A0A6I3WWQ7_9ACTN) HSP 1 Score: 247 bits (630), Expect = 6.110e-73 Identity = 127/155 (81.94%), Postives = 132/155 (85.16%), Query Frame = 1
Query: 1 MADHSVLQAFSPAVREWFANSFPEPTPAQVTGWPAIIGRGHTLVCAPTGSGKTLTAFLASIDRLCTTPPPEDPKARTRVLYLSPLRALAFDVEKNLRSPLMGIQLAAERLGVSFQQPIVAMRTGDTSSSDRQKLIRRPPDLLITTPESLYLMLTS 465
MADH LQ FSPAVR WFA SFPEPTPAQV GW AI G HTL+CAPTGSGKTL AFL+ IDRL TTP PE ARTRVLY+SPLRALAFDVEKNLR+PLMGIQLAAERLG F QP+VAMRTGDTS DRQ LIRRPPDLLITTPESLYLMLTS
Sbjct: 1 MADHDALQRFSPAVRAWFATSFPEPTPAQVHGWSAITGGQHTLICAPTGSGKTLAAFLSCIDRLVTTPLPEK-AARTRVLYISPLRALAFDVEKNLRAPLMGIQLAAERLGEPFVQPVVAMRTGDTSPKDRQALIRRPPDLLITTPESLYLMLTS 154
BLAST of mRNA_P-wetherbeei_contig18417.2.1 vs. uniprot
Match: A0A6N2DIA1_9ACTN (DEAD/DEAH box helicase n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A6N2DIA1_9ACTN) HSP 1 Score: 243 bits (619), Expect = 1.860e-71 Identity = 123/155 (79.35%), Postives = 134/155 (86.45%), Query Frame = 1
Query: 1 MADHSVLQAFSPAVREWFANSFPEPTPAQVTGWPAIIGRGHTLVCAPTGSGKTLTAFLASIDRLCTTPPPEDPKARTRVLYLSPLRALAFDVEKNLRSPLMGIQLAAERLGVSFQQPIVAMRTGDTSSSDRQKLIRRPPDLLITTPESLYLMLTS 465
MA H VL+AFSPAVREWFA+SFPEPT QV GWP I +TL+CAPTGSGKTLTAFLASIDRL T+P P + RTRVLY+SPLRALAFD+EKNLRSPL+GI LAAERLG F +P VAMRTGDTSSSDRQKL+RRPPDLLITTPESLYLMLTS
Sbjct: 1 MAGHPVLEAFSPAVREWFASSFPEPTAPQVQGWPLIAAGRNTLICAPTGSGKTLTAFLASIDRLVTSPTPPERTHRTRVLYISPLRALAFDIEKNLRSPLVGIGLAAERLGEPFVKPEVAMRTGDTSSSDRQKLVRRPPDLLITTPESLYLMLTS 155
BLAST of mRNA_P-wetherbeei_contig18417.2.1 vs. uniprot
Match: A0A7W0KXJ7_9ACTN (DEAD/DEAH box helicase (Fragment) n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W0KXJ7_9ACTN) HSP 1 Score: 241 bits (614), Expect = 2.640e-71 Identity = 120/155 (77.42%), Postives = 131/155 (84.52%), Query Frame = 1
Query: 1 MADHSVLQAFSPAVREWFANSFPEPTPAQVTGWPAIIGRGHTLVCAPTGSGKTLTAFLASIDRLCTTPPPEDPKARTRVLYLSPLRALAFDVEKNLRSPLMGIQLAAERLGVSFQQPIVAMRTGDTSSSDRQKLIRRPPDLLITTPESLYLMLTS 465
MADH VL++FSPAVR WFA +FPEPT AQV GWP I HTL+CAPTGSGKTL AFL+SID L T P PEDPK RTRVLY+SPLRALAFDVEKNLR+PL GI LAAER+G + P VAMRTGDTSS DRQ+L+RRPPDLLITTPESLYLMLTS
Sbjct: 1 MADHPVLESFSPAVRAWFAAAFPEPTAAQVQGWPPIAAGDHTLICAPTGSGKTLAAFLSSIDALATRPMPEDPKRRTRVLYISPLRALAFDVEKNLRAPLAGIGLAAERIGETVLTPEVAMRTGDTSSQDRQRLVRRPPDLLITTPESLYLMLTS 155
BLAST of mRNA_P-wetherbeei_contig18417.2.1 vs. uniprot
Match: A0A7K1CUF5_9ACTN (DEAD/DEAH box helicase (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7K1CUF5_9ACTN) HSP 1 Score: 229 bits (584), Expect = 1.050e-70 Identity = 111/150 (74.00%), Postives = 132/150 (88.00%), Query Frame = 1
Query: 16 VLQAFSPAVREWFANSFPEPTPAQVTGWPAIIGRGHTLVCAPTGSGKTLTAFLASIDRLCTTPPPEDPKARTRVLYLSPLRALAFDVEKNLRSPLMGIQLAAERLGVSFQQPIVAMRTGDTSSSDRQKLIRRPPDLLITTPESLYLMLTS 465
+L+AFSPAVREWFA++FPEPT Q+ GWPAI+G HTL+C+PTGSGKTLTAFL+S+DRL TT P + K RTRVLY+SPLRALAFDVEKNLR+PL+GI AAERLG+++ P+V MRTGDTS+ +RQ+L RRPPDLLITTPESLYLMLTS
Sbjct: 1 MLEAFSPAVREWFASNFPEPTAPQIQGWPAIVGGAHTLICSPTGSGKTLTAFLSSLDRLITTEAPSE-KQRTRVLYVSPLRALAFDVEKNLRAPLVGIGHAAERLGIAYNAPVVGMRTGDTSARERQQLARRPPDLLITTPESLYLMLTS 149
BLAST of mRNA_P-wetherbeei_contig18417.2.1 vs. uniprot
Match: A0A7W0QGI6_9ACTN (DEAD/DEAH box helicase (Fragment) n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W0QGI6_9ACTN) HSP 1 Score: 222 bits (566), Expect = 1.150e-70 Identity = 111/155 (71.61%), Postives = 128/155 (82.58%), Query Frame = 1
Query: 1 MADHSVLQAFSPAVREWFANSFPEPTPAQVTGWPAIIGRGHTLVCAPTGSGKTLTAFLASIDRLCTTPPPEDPKARTRVLYLSPLRALAFDVEKNLRSPLMGIQLAAERLGVSFQQPIVAMRTGDTSSSDRQKLIRRPPDLLITTPESLYLMLTS 465
+ADH L+ FSPAVR WFA SF PT AQV GWP I TL+CAPTGSGKTLTAFLA++D L T+ P ++ RTRVLY+SPLRALAFDVEKNLRSPL GI+LAA+R G+S +P+VAMRTGDT S++RQ+LIRRPPDLLITTPESLYLMLTS
Sbjct: 45 IADHEALEPFSPAVRAWFATSFEAPTAAQVQGWPHIARGESTLICAPTGSGKTLTAFLAALDTLMTSEPSQERSHRTRVLYVSPLRALAFDVEKNLRSPLRGIELAADRTGLSVVEPVVAMRTGDTPSNERQRLIRRPPDLLITTPESLYLMLTS 199
BLAST of mRNA_P-wetherbeei_contig18417.2.1 vs. uniprot
Match: A0A7K1B6R8_9ACTN (DEAD/DEAH box helicase n=2 Tax=root TaxID=1 RepID=A0A7K1B6R8_9ACTN) HSP 1 Score: 239 bits (610), Expect = 3.030e-70 Identity = 121/150 (80.67%), Postives = 130/150 (86.67%), Query Frame = 1
Query: 16 VLQAFSPAVREWFANSFPEPTPAQVTGWPAIIGRGHTLVCAPTGSGKTLTAFLASIDRLCTTPPPEDPKARTRVLYLSPLRALAFDVEKNLRSPLMGIQLAAERLGVSFQQPIVAMRTGDTSSSDRQKLIRRPPDLLITTPESLYLMLTS 465
+L FSPAVR WF +SFPEPTP QV GWP I HTL+CAPTGSGKTLTAFLASIDRL TT PP D KARTRVLY+SPLRALAFDVEKNLRSPLMGI LAAERLG +F +P+VAMRTGDTS+ DRQ L+RRPPDLLITTPESLYLMLTS
Sbjct: 1 MLDRFSPAVRAWFGSSFPEPTPPQVQGWPHIAAGSHTLICAPTGSGKTLTAFLASIDRLTTTSPP-DAKARTRVLYISPLRALAFDVEKNLRSPLMGIALAAERLGEAFVEPMVAMRTGDTSAKDRQALVRRPPDLLITTPESLYLMLTS 149
BLAST of mRNA_P-wetherbeei_contig18417.2.1 vs. uniprot
Match: A0A6J6K816_9ZZZZ (Unannotated protein n=1 Tax=freshwater metagenome TaxID=449393 RepID=A0A6J6K816_9ZZZZ) HSP 1 Score: 238 bits (606), Expect = 1.050e-69 Identity = 116/155 (74.84%), Postives = 136/155 (87.74%), Query Frame = 1
Query: 1 MADHSVLQAFSPAVREWFANSFPEPTPAQVTGWPAIIGRGHTLVCAPTGSGKTLTAFLASIDRLCTTPPPEDPKARTRVLYLSPLRALAFDVEKNLRSPLMGIQLAAERLGVSFQQPIVAMRTGDTSSSDRQKLIRRPPDLLITTPESLYLMLTS 465
MADH VL+AFSPAVREWFA++FPEPT Q+ GWPAI+G HTL+C+PTGSGKTLTAFL+S+DRL TT P + K RTRVLY+SPLRALAFDVEKNLR+PL+GI AAERLG+++ P+V MRTGDTS+ +RQ+L RRPPDLLITTPESLYLMLTS
Sbjct: 1 MADHKVLEAFSPAVREWFASNFPEPTAPQIQGWPAIVGGAHTLICSPTGSGKTLTAFLSSLDRLITTEAPPE-KQRTRVLYVSPLRALAFDVEKNLRAPLVGIGHAAERLGIAYNAPVVGMRTGDTSARERQQLGRRPPDLLITTPESLYLMLTS 154
BLAST of mRNA_P-wetherbeei_contig18417.2.1 vs. uniprot
Match: A0A6I2WV79_9ACTN (DEAD/DEAH box helicase (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A6I2WV79_9ACTN) HSP 1 Score: 228 bits (580), Expect = 3.730e-69 Identity = 113/152 (74.34%), Postives = 128/152 (84.21%), Query Frame = 1
Query: 10 HSVLQAFSPAVREWFANSFPEPTPAQVTGWPAIIGRGHTLVCAPTGSGKTLTAFLASIDRLCTTPPPEDPKARTRVLYLSPLRALAFDVEKNLRSPLMGIQLAAERLGVSFQQPIVAMRTGDTSSSDRQKLIRRPPDLLITTPESLYLMLTS 465
H VL AFSPAV WFA SFPEPT AQV GWP I+ HTL+CAPTGSGKTLTAFL +IDRL TTP P D +ARTRVLY+SPLRALAFD+EKNLR+PL GI+LAAERLGV F +P V +RTGDT + DRQ+++R PPDLLITTPESLYL+LTS
Sbjct: 11 HPVLGAFSPAVGTWFATSFPEPTAAQVQGWPRIMAGEHTLICAPTGSGKTLTAFLGAIDRLVTTPAP-DTRARTRVLYISPLRALAFDIEKNLRAPLQGIKLAAERLGVPFIEPTVGLRTGDTPARDRQRMLRNPPDLLITTPESLYLLLTS 161 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18417.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig18417.2.1 >prot_P-wetherbeei_contig18417.2.1 ID=prot_P-wetherbeei_contig18417.2.1|Name=mRNA_P-wetherbeei_contig18417.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=155bp MADHSVLQAFSPAVREWFANSFPEPTPAQVTGWPAIIGRGHTLVCAPTGSback to top mRNA from alignment at P-wetherbeei_contig18417:884..1348+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig18417.2.1 ID=mRNA_P-wetherbeei_contig18417.2.1|Name=mRNA_P-wetherbeei_contig18417.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=465bp|location=Sequence derived from alignment at P-wetherbeei_contig18417:884..1348+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig18417:884..1348+ >mRNA_P-wetherbeei_contig18417.2.1 ID=mRNA_P-wetherbeei_contig18417.2.1|Name=mRNA_P-wetherbeei_contig18417.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=465bp|location=Sequence derived from alignment at P-wetherbeei_contig18417:884..1348+ (Phaeothamnion wetherbeei SAG_119_79)back to top |