mRNA_P-wetherbeei_contig18392.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig18392.1.1 vs. uniprot
Match: UPI0002D2B014 (fumarylacetoacetate hydrolase family protein n=1 Tax=Nocardia jiangxiensis TaxID=282685 RepID=UPI0002D2B014) HSP 1 Score: 151 bits (381), Expect = 5.890e-40 Identity = 103/312 (33.01%), Postives = 156/312 (50.00%), Query Frame = 1
Query: 31 GIGTIIDAGNAATAVVVNDQVCRLADIVARHSTPGAAAPQ--MRDFMPDWDRWHNWLRNLDLDPAKEEGWQPIDAVQFSAPVPEPWNIF---QTYHNFDRPSRISGKVDPPKAERLLPDMFMASRSSLAGFGETIYREHGGYQFDFELEVTAIIGKPAFRVPAERADEYIAGYAIANDYTMHFSWWTKLREGRRTNDS------IRMKNFPGYTPMSRVIVPRDLVGDPHDLGVKVTVDGVLRQDTRTNAMLWRVPELVEYLSHVMPLKPGDLIITGSPEELPLPPGEKKGLRNGQVVVCEVEKLGRLSNTI 933
G+ TI+ A A+ + V LA+ RH GA AP +R + DWDRW + L D + GW AV F + +P I+ YH+ R R + P+ P F+ +SLAG R G + D+E+E+ IIG+ A R+PA +A IAGY +AND + LR+ +D+ + MK++ G TP+ IVP + V DP +L + ++V+G RQ + T M++ + E +EYLS ++PL+ GD+I+TG+P + L G VV E+ +GRL I
Sbjct: 11 GLATILLENTPALAIWADGFVLPLAEAARRH---GAGAPPSCIRAALTDWDRWCDLLEYARNDGVGDTGWLAETAVDFLPAITDPPTIYCAATNYHDHIREMRSTKTFAAPRT----PMYFLVPPASLAGHRGATARPDGCERLDWEVELAVIIGREADRIPAAQAHRVIAGYTVANDLS--------LRDFAHRDDTPFFPDRLAMKSYAGCTPLGPAIVPAECVPDPMNLELALSVNGERRQGSTTANMVFSIAEQIEYLSRIVPLRAGDVILTGTPAGTAAA-WDGAYLSPGDTVVAEIRGVGRLETRI 306
BLAST of mRNA_P-wetherbeei_contig18392.1.1 vs. uniprot
Match: A0A0N7F443_9PSEU (FAA_hydrolase domain-containing protein n=1 Tax=Kibdelosporangium phytohabitans TaxID=860235 RepID=A0A0N7F443_9PSEU) HSP 1 Score: 144 bits (364), Expect = 1.020e-37 Identity = 91/267 (34.08%), Postives = 139/267 (52.06%), Query Frame = 1
Query: 133 GAAAPQMRDFMPDWDRWHNWLRNLDLDPAKEEGWQPIDAVQFSAPVPEPWNIFQTYHNFDRPSRISGKVDPPKAERLLPDMFMASRSSLAGFGETIYREHGGYQFDFELEVTAIIGKPAFRVPAERADEYIAGYAIANDYTMHFSWWTKLREGRRTNDSIRMKNFPGYTPMSRVIVPRDLVGDPHDLGVKVTVDGVLRQDTRTNAMLWRVPELVEYLSHVMPLKPGDLIITGSPEELPLPPGEKKGLRNGQVVVCEVEKLGRLSNTI 933
G P +R + DWD + L + D + P V F P+ +P I+ N+ +R G DPP+A F+ S +SL G T++R G + D+E+E+ +IG+PA + A ++IAGY +AND + +R D +R K++ G+TP+ IVPR LV D DL + +TV+G ++Q + TN M+ V + V LS + PL+PGD+++TG+P G L G VVV E+ +GRL N I
Sbjct: 27 GVTTPTVRATLSDWDTLCDLLEDADRSGKLAKLSTPDTDVTFLPPLADPPAIYCAGANYHDHAREMG-TDPPQATF----HFLVSPASLTGHRSTVHRPEGCQRLDWEVELAIVIGRPASAIHPAAAADHIAGYTVANDLSAR----DHVRASGLGIDWLRHKSYAGFTPLGPAIVPRRLVPDATDLELTLTVNGQVKQHSNTNQMISGVGDQVAALSRIAPLRPGDVVLTGTPAGTAAAHGHY--LHPGDVVVAEITGIGRLENRI 282
BLAST of mRNA_P-wetherbeei_contig18392.1.1 vs. uniprot
Match: K4QY12_STRDJ (Hydrolase n=1 Tax=Streptomyces davaonensis (strain DSM 101723 / JCM 4913 / KCC S-0913 / 768) TaxID=1214101 RepID=K4QY12_STRDJ) HSP 1 Score: 143 bits (361), Expect = 7.820e-37 Identity = 109/317 (34.38%), Postives = 156/317 (49.21%), Query Frame = 1
Query: 28 FGIGTIIDAGNAATAVVVNDQVCRLADIVARHSTPGAAAPQMRDFMPDWDRWHNWLRNLDLDPAKEEGWQPIDAVQFSAPVPEPWNIFQTYHNF--------------DRP-------SRISGKVDPPKAERLLPDMFMASRSSLAGFGETIYREHGGYQFDFELEVTAIIGKPAFRVPAERADEYIAGYAIANDYTMHFSWWTKLREGRRTNDSIRMKNFPGYTPMSRVIVPRDLVGDPHDLGVKVTVDGVLRQDTRTNAMLWRVPELVEYLSHVMPLKPGDLIITGSPEELPLPPGEKKGLRNGQVVVCEVEKLG 915
F +GT+ G A +V + R AD+ P A R WD LR L DP E WQP+D + APV EP +FQ+ N+ D P + I+ +D AE L P +F+ S++ G + + Q D+ELE+ A+IG+PA+RVP E A ++IAGY IAND T + + + + T D +R KN PG+TP+ IVP + V DP +L V + ++G QD T M++ V +V Y S L PGDL++TGSP + G LR+G V+ + LG
Sbjct: 10 FALGTLSAPGQAPFPALVTPEQ-RAADLRTALGDPALTA---RAVFERWDEVQPRLRALAADP--EAAWQPLDGLTVHAPV-EPRQVFQSGANYRQHVIDLEVAHRAPDDPRTVEEARTEIAAIMDRRAAEDL-PYVFIGLPSAITGPYDDVLLPAWAEQPDWELELAAVIGRPAYRVPVEEALDHIAGYTIANDLTDRATVFRRDMKAIGT-DWLRSKNAPGFTPLGPWIVPAESVTDPGELRVTLKLNGETMQDESTKDMIFGVARMVSYASQAAQLLPGDLVLTGSPAGNGMHWGRL--LRDGDVMEGSITGLG 315
BLAST of mRNA_P-wetherbeei_contig18392.1.1 vs. uniprot
Match: A0A6I1Z6L7_9ACTN (FAA_hydrolase domain-containing protein n=3 Tax=Streptomyces TaxID=1883 RepID=A0A6I1Z6L7_9ACTN) HSP 1 Score: 142 bits (359), Expect = 1.600e-36 Identity = 109/318 (34.28%), Postives = 157/318 (49.37%), Query Frame = 1
Query: 28 FGIGTIIDA-GNAATAVVVNDQVCRLADIVARHSTPGAAAPQMRDFMPDWDRWHNWLRNLDLDPAKEEGWQPIDAVQFSAPVPEPWNIFQTYHNF--------------DRP-------SRISGKVDPPKAERLLPDMFMASRSSLAGFGETIYREHGGYQFDFELEVTAIIGKPAFRVPAERADEYIAGYAIANDYTMHFSWWTKLREGRRTNDSIRMKNFPGYTPMSRVIVPRDLVGDPHDLGVKVTVDGVLRQDTRTNAMLWRVPELVEYLSHVMPLKPGDLIITGSPEELPLPPGEKKGLRNGQVVVCEVEKLG 915
F +GT+ GN +VV D+V L+ +A +R + W+ L L + E WQP+D +Q APV EP IFQ+ N+ D P + I+ +D AE L P +F+ S++ G + + Q D+ELE+ A+I KPA+RVP E A EY+AGY IAND T + + + + T D +R KN PG+TP+ IVP + DP DL V + ++G QD T ML+ + LV Y+S L PGDL++TGSP + G LR+G V+ + LG
Sbjct: 11 FALGTLSTPDGNPFPGLVVRDRVLDLSQALAWKPA------DVRSVLERWEETLPVLHTLAGEDTLE--WQPLDGLQVHAPV-EPRQIFQSGANYRQHVIDLEVAHRSPDDPRTVEEARAEIAAVMDRRAAEDL-PYVFIGLASAITGPYDDVVLPAWAEQPDWELELAAVIAKPAYRVPVEAALEYVAGYTIANDLTDRATVFRRDMKAIGT-DWLRSKNAPGFTPLGPWIVPAGSIADPGDLRVTLKLNGETMQDESTKDMLFGIARLVSYVSQTARLLPGDLVLTGSPAGNGIHWGRL--LRDGDVMEGSITGLG 315
BLAST of mRNA_P-wetherbeei_contig18392.1.1 vs. uniprot
Match: UPI001FE20196 (fumarylacetoacetate hydrolase family protein n=1 Tax=Nocardia jiangxiensis TaxID=282685 RepID=UPI001FE20196) HSP 1 Score: 141 bits (355), Expect = 5.770e-36 Identity = 103/311 (33.12%), Postives = 157/311 (50.48%), Query Frame = 1
Query: 31 GIGTIIDAGNAATAVVVNDQVCRLADIVAR---HSTPGAAAPQMRDFMPDWDRWHNWLRNLDLDPAKEEGWQPIDAVQFSAPVPEPWNIFQTYHNF-DRPSRISGKVDPPKAERLLPDMFMASRSSLAGFGETIYREHGGYQFDFELEVTAIIGKPAFRVPAERADEYIAGYAIANDYTMHFSWWTKLREGRRTNDS------IRMKNFPGYTPMSRVIVPRDLVGDPHDLGVKVTVDGVLRQDTRTNAMLWRVPELVEYLSHVMPLKPGDLIITGSPEELPLPPGEKKGLRNGQVVVCEVEKLGRLSNTI 933
G+ TI A+ N V LA+ R S PG+A R + DW+ W + + + D EGW P V+F P + ++ T N+ D +SG + +A P F+A +SLAG R G +FD+E+E+ +IG+ A++VPA A IAGYA+A+D + LR+ R D+ + MK G TP+ V+VP V DP +L + ++V+G RQ + T M++ + E +EYLS ++PL+PGD+I+TG+P K L G VV E+ +G+L I
Sbjct: 10 GLATISLDSAPTLAIWANGHVLPLAEAAPRVGSDSVPGSA----RTALLDWESWCSLIDRVSAD-VGGEGWLPDTEVEFR-PAIDASTVYCTAANYHDHIREMSGTTERSQARA--PLYFLAPPASLAGHRGAAARPDGCQRFDWEVELAVVIGRRAWQVPAGDAYTVIAGYAVADDLS--------LRDFARREDTPFFPDWLGMKGHAGCTPIGPVLVPAAAVPDPMNLELSLSVNGERRQHSNTAEMIFSIAEQIEYLSGIVPLRPGDVILTGTPAGTGA--AWKSFLAPGDTVVAEIGGVGQLETRI 302
BLAST of mRNA_P-wetherbeei_contig18392.1.1 vs. uniprot
Match: A0A100JQE0_STRSC (Ureidoglycolate lyase n=6 Tax=Streptomyces TaxID=1883 RepID=A0A100JQE0_STRSC) HSP 1 Score: 140 bits (353), Expect = 1.290e-35 Identity = 110/324 (33.95%), Postives = 158/324 (48.77%), Query Frame = 1
Query: 7 SGKFETLFGIGTIIDAG-NAATAVVVNDQVCRLADIVARHSTPGAAAPQMRDFMPDWDRWHNWLRNLDLDPAKEEGWQPIDAVQFSAPVPEPWNIFQTYHNF--------------DRPSRIS------GKVDPPKAERLLPDMFMASRSSLAGFGETIYREHGGYQFDFELEVTAIIGKPAFRVPAERADEYIAGYAIANDYTMHFSWWTKLREGRRTNDSIRMKNFPGYTPMSRVIVPRDLVGDPHDLGVKVTVDGVLRQDTRTNAMLWRVPELVEYLSHVMPLKPGDLIITGSPEELPLPPGEKKGLRNGQVVVCEVEKLG 915
S F F +GT+ AG + A+VV + R+ D+ A P A R + WD LR L D A + W P+D ++ APV EP +FQ+ N+ D P + +V +A LP +F+ S++ G + + Q D+ELE+ A+I KPA +V E A EYIAGY IAND T + + + G T D + KN PG+TP+ IVP + + DP DL V + ++G QD T ML+ + LV Y+S L PGDL++TGSP + G LR+G V+ + LG
Sbjct: 7 SPTFSGPFALGTVSAAGRDPFPALVVPGR--RVLDLRAALGAPELTA---RTLLEGWDEVLPRLRALAADTAGD--WLPLDGLRVHAPV-EPRQVFQSGANYRQHVIDLAVAHRAPDDPRTVEEARAEFAEVMDRRAREDLPYVFIGLPSAITGPYDDVVLPAWATQPDWELELAAVIAKPAHQVSVEEAPEYIAGYTIANDLTDRATVFRQDMPGIGT-DWLHSKNAPGFTPLGPWIVPAESIADPGDLRVTLKLNGDTMQDESTKDMLFGIARLVSYISQTSRLLPGDLVLTGSPAGNGMHWGRL--LRDGDVMEGSITGLG 319
BLAST of mRNA_P-wetherbeei_contig18392.1.1 vs. uniprot
Match: UPI00047B372D (fumarylacetoacetate hydrolase family protein n=1 Tax=Acidobacterium ailaaui TaxID=1382359 RepID=UPI00047B372D) HSP 1 Score: 137 bits (346), Expect = 4.420e-35 Identity = 76/232 (32.76%), Postives = 131/232 (56.47%), Query Frame = 1
Query: 241 IDAVQFSAPVPEPWNIFQTYHNFDRPSRISGKVDPPKAERLLPDMFMASRSSLAGFGETIYREHGGYQFDFELEVTAIIGKPAFRVPAERADEYIAGYAIANDYTMHFSWWTKLREGR-RTNDSIRMKNFPGYTPMSRVIVPRDLVGDPHDLGVKVTVDGVLRQDTRTNAMLWRVPELVEYLSHVMPLKPGDLIITGSPEELPLPPGEKKGLRNGQVVVCEVEKLGRLSNTI 933
+D V+ AP+P+P IF N+ R + +++ PK +P +F+ ++L G GE I Q D+E+E +IG+ R+ E +Y+ GY I ND + R+ + T+ + K+FP + P+ IV +D + DPH L +++++DG L Q + T +++++P+L+ YLS ++PL PGD+I TG+P + L ++ L+ G+ V CEV LG+L N +
Sbjct: 60 LDEVRLLAPIPDPPRIFCIGLNY-RDHAVESRMEVPK----VPTVFLKLPTALVGHGEAIRLPSISSQPDYEVEFACVIGRDGHRIARENWLDYVFGYTILNDVS--------ARDVQLATSQWVLGKSFPTFAPLGPAIVTKDEIPDPHALDIRLSIDGELLQHSNTQELIFKLPDLIAYLSSIVPLLPGDIISTGTPAGVGLGRTPQRWLKPGETVTCEVAGLGQLVNPV 278
BLAST of mRNA_P-wetherbeei_contig18392.1.1 vs. uniprot
Match: UPI001CEF183D (fumarylacetoacetate hydrolase family protein n=1 Tax=Kibdelosporangium phytohabitans TaxID=860235 RepID=UPI001CEF183D) HSP 1 Score: 134 bits (336), Expect = 3.060e-34 Identity = 83/232 (35.78%), Postives = 126/232 (54.31%), Query Frame = 1
Query: 238 PIDAVQFSAPVPEPWNIFQTYHNFDRPSRISGKVDPPKAERLLPDMFMASRSSLAGFGETIYREHGGYQFDFELEVTAIIGKPAFRVPAERADEYIAGYAIANDYTMHFSWWTKLREGRRTNDSIRMKNFPGYTPMSRVIVPRDLVGDPHDLGVKVTVDGVLRQDTRTNAMLWRVPELVEYLSHVMPLKPGDLIITGSPEELPLPPGEKKGLRNGQVVVCEVEKLGRLSNTI 933
P V F P+ +P I+ N+ +R G DPP+A F+ S +SL G T++R G + D+E+E+ +IG+PA + A ++IAGY +AND + +R D +R K++ G+TP+ IVPR LV D DL + +TV+G ++Q + TN M+ V + V LS + PL+PGD+++TG+P G L G VVV E+ +GRL N I
Sbjct: 4 PDTDVTFLPPLADPPAIYCAGANYHDHAREMG-TDPPQATF----HFLVSPASLTGHRSTVHRPEGCQRLDWEVELAIVIGRPASAIHPAAAADHIAGYTVANDLSAR----DHVRASGLGIDWLRHKSYAGFTPLGPAIVPRRLVPDATDLELTLTVNGQVKQHSNTNQMISGVGDQVAALSRIAPLRPGDVVLTGTPAGTAAAHGHY--LHPGDVVVAEITGIGRLENRI 224
BLAST of mRNA_P-wetherbeei_contig18392.1.1 vs. uniprot
Match: UPI000FF89384 (fumarylacetoacetate hydrolase family protein n=2 Tax=Streptomyces TaxID=1883 RepID=UPI000FF89384) HSP 1 Score: 136 bits (343), Expect = 3.560e-34 Identity = 97/281 (34.52%), Postives = 145/281 (51.60%), Query Frame = 1
Query: 136 AAAPQMRDFMPDWDRWHNWLRNLDLDPAKEEGWQPIDAVQFSAPVPEPWNIFQTYHNF--------------DRP-------SRISGKVDPPKAERLLPDMFMASRSSLAGFGETIYREHGGYQFDFELEVTAIIGKPAFRVPAERADEYIAGYAIANDYTMHFSWWTKLREGRRTNDSIRMKNFPGYTPMSRVIVPRDLVGDPHDLGVKVTVDGVLRQDTRTNAMLWRVPELVEYLSHVMPLKPGDLIITGSPEELPLPPGEKKGLRNGQVVVCEVEKLG 915
+A +R + W+ LR L D A+E WQP++ ++ APV EP IFQ+ N+ D P + I+ +D AE L P +F+ +++AG + + Q D+ELE+ A+I KPA+RV E A EY+AGY IAND T + + + + T D +R KN PG+TP+ +VP + + DP DL V + ++G QD T ML+ + LV Y+S L PGD ++TGSP + G LR+G V+ + LG
Sbjct: 44 SAPSDVRAVLERWEDTLPMLRALAGDDARE--WQPLEGLRVHAPV-EPRQIFQSGANYRQHVIDLEVAHRSPDDPRTVEEARAEIAAVMDRRAAEDL-PYVFIGLPTTVAGPYDDVVLPSWAQQPDWELELAAVIAKPAYRVGVEEAMEYVAGYTIANDLTDRATVFRRDMKAIGT-DWLRCKNAPGFTPLGPWLVPAESIADPDDLRVTLKLNGDTMQDESTKDMLFGIARLVSYISQTAQLLPGDCVLTGSPAGNGIHWGRL--LRDGDVMEGSITGLG 317
BLAST of mRNA_P-wetherbeei_contig18392.1.1 vs. uniprot
Match: A0A1H4SC45_9BACT (2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (Catechol pathway) n=1 Tax=Terriglobus roseus TaxID=392734 RepID=A0A1H4SC45_9BACT) HSP 1 Score: 135 bits (339), Expect = 3.880e-34 Identity = 82/246 (33.33%), Postives = 133/246 (54.07%), Query Frame = 1
Query: 190 WLRNLDLDPAKEEGWQPIDAVQFSAPVPEPWNIFQTYHNFDRPSRISGKVDPPKAERLLPDMFMASRSSLAGFGETIYREHGGYQFDFELEVTAIIGKPAFRVPAERADEYIAGYAIANDYTMHFSWWTKLREGRRTNDSIRMKNFPGYTPMSRVIVPRDLVGDPHDLGVKVTVDGVLRQDTRTNAMLWRVPELVEYLSHVMPLKPGDLIITGSPEELPLPPGEKKGLRNGQVVVCEVEKLGRLSN 927
++ + D PA E + V+ AP+ P IF N+ + S V + +P +FM SS+ G E + Q DFE+E+ +IG+P +R+ A ++++ GY I ND + +L + T K+FP +TPM IV RD V DPH L +K+T+DG + Q T +++RVPEL+ Y+S ++PL+ GD+I TG+P + L ++ L+ G+ ++ EVE++G L N
Sbjct: 38 FIESGDTQPALEAQTLALSEVKLLAPIQRPPRIFGVGLNYREHAAESKMV-----VQSVPTVFMKLSSSVIGPEEDVILAPEALQPDFEVELGVVIGRPGYRIAAGDWEDHVFGYTIVNDVSARA---VQLATTQWTLG----KSFPTFTPMGPCIVTRDEVPDPHALDIKLTLDGEVMQSANTRDLIFRVPELIAYISSIVPLEAGDVISTGTPPGVGLGRTPQRWLKPGEQMLLEVERIGTLRN 271 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18392.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig18392.1.1 >prot_P-wetherbeei_contig18392.1.1 ID=prot_P-wetherbeei_contig18392.1.1|Name=mRNA_P-wetherbeei_contig18392.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=312bp MASGKFETLFGIGTIIDAGNAATAVVVNDQVCRLADIVARHSTPGAAAPQback to top mRNA from alignment at P-wetherbeei_contig18392:288..1223+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig18392.1.1 ID=mRNA_P-wetherbeei_contig18392.1.1|Name=mRNA_P-wetherbeei_contig18392.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=936bp|location=Sequence derived from alignment at P-wetherbeei_contig18392:288..1223+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig18392:288..1223+ >mRNA_P-wetherbeei_contig18392.1.1 ID=mRNA_P-wetherbeei_contig18392.1.1|Name=mRNA_P-wetherbeei_contig18392.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=936bp|location=Sequence derived from alignment at P-wetherbeei_contig18392:288..1223+ (Phaeothamnion wetherbeei SAG_119_79)back to top |