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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 1434 |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Cds size | 1218 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683186143.5073054-UTR-P-wetherbeei_contig1835:3222..3358 | 1683186143.5073054-UTR-P-wetherbeei_contig1835:3222..3358 | Phaeothamnion wetherbeei SAG_119_79 | UTR | P-wetherbeei_contig1835 3223..3358 + |
| 1683186143.5357478-UTR-P-wetherbeei_contig1835:4706..4786 | 1683186143.5357478-UTR-P-wetherbeei_contig1835:4706..4786 | Phaeothamnion wetherbeei SAG_119_79 | UTR | P-wetherbeei_contig1835 4707..4786 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683186143.5177958-CDS-P-wetherbeei_contig1835:3358..3520 | 1683186143.5177958-CDS-P-wetherbeei_contig1835:3358..3520 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig1835 3359..3520 + |
| 1683186143.5276778-CDS-P-wetherbeei_contig1835:3650..4706 | 1683186143.5276778-CDS-P-wetherbeei_contig1835:3650..4706 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig1835 3651..4706 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1835.2.1 >prot_P-wetherbeei_contig1835.2.1 ID=prot_P-wetherbeei_contig1835.2.1|Name=mRNA_P-wetherbeei_contig1835.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=406bp
MLEYLVESFVEGFFHGFSSSSRRRGETGNETIGRRRFKFPSPNHVSRAKM
LHEKDFVAIVSSLQDSTKSAHVHMEYLETIHSLSQVGSGNRRALAQAGVA
SAIVAVFATHSENAAVQRSCCRAVVAFAANEPENQRLMREAGAVETTVDA
LNSHRSDPLLAESALDAIRSLADDCLENQRAFATAGTCVAVAAALVAHGG
IMRTAESACWALRSLASWPKNVRLLREAGAFESVVATLTYYCHGEHNAVL
EAALGAIAKFALSGAERYHLRKIGACDAVLSMLRTNLSRSAVQGWSLAAL
GYMVVENPENRRALLDSGAADAVVAALNALPGDADNVQTWGLWAILMMAS
RDPESVGRLRQAGAETAIMAALANHPKHADVQEWGAAASDALLQFYLRPA
EAPKV* back to topmRNA from alignment at P-wetherbeei_contig1835:3223..4786+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-wetherbeei_contig1835.2.1 ID=mRNA_P-wetherbeei_contig1835.2.1|Name=mRNA_P-wetherbeei_contig1835.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1564bp|location=Sequence derived from alignment at P-wetherbeei_contig1835:3223..4786+ (Phaeothamnion wetherbeei SAG_119_79)
CCGGCCACAAAAATGAAATAAACCACTCCAAAGCACGGTTTTAGGTCGGC
GACCCAGCTTCCCACAAGGAGCTTGACCGGGAGGCTTCTGACATTGTCTG
AGCTGATCCTCCTTACAATCCGAAGGCGTATCAGCCATGTTGGAATATTT
AGTCGAGAGCTTCGTCGAGGGCTTCTTTCACGGGTTCAGCAGCTCCAGCC
GCCGGCGAGGAGAGACGGGCAATGAGACAATCGGCAGGCGGAGATTCAAA
TTCCCCTCCCCAAACCATGTATCTAGAGCGAAGATGCTGCACGAGAAGGT
AGGTACTCCCGTCCTCATTCTATCCCCTTCTTATCAGCTTGCGCTTTTGC
ATGGTGTTTTCATCTGCAAAAACCCTTCTCTTTGTTGTCCGTCGCCCTCC
ATTGCTTGATCACCTCCCCCCTCTGCAGGATTTCGTGGCGATCGTGAGCA
GCCTGCAAGACAGCACAAAAAGTGCTCACGTGCACATGGAATATCTGGAG
ACGATCCACTCCTTGTCACAGGTTGGCTCTGGGAATCGTCGCGCGCTGGC
ACAGGCGGGAGTCGCTAGCGCGATCGTTGCCGTCTTCGCCACCCACAGCG
AGAACGCAGCCGTGCAACGCAGCTGTTGCAGAGCCGTCGTCGCTTTTGCC
GCAAACGAGCCTGAGAACCAGCGGCTGATGCGCGAAGCAGGCGCTGTCGA
GACCACCGTCGACGCACTGAACTCCCACAGGAGCGACCCGCTTCTGGCCG
AATCGGCGCTCGACGCGATAAGATCGCTTGCGGACGACTGCCTCGAGAAC
CAGCGCGCTTTTGCGACCGCCGGGACCTGCGTTGCCGTCGCCGCCGCCCT
GGTGGCCCACGGCGGCATCATGCGCACTGCAGAATCTGCGTGCTGGGCCC
TCCGCTCGCTCGCCTCTTGGCCCAAGAACGTGCGGCTGCTGCGGGAAGCC
GGGGCCTTCGAGTCCGTCGTCGCTACGCTGACTTACTACTGCCATGGCGA
GCACAACGCCGTCTTGGAGGCGGCGCTCGGCGCGATCGCGAAGTTCGCCC
TCAGCGGTGCGGAGCGGTACCACCTCCGCAAAATTGGCGCCTGCGACGCC
GTGCTGTCGATGCTGCGGACCAACCTGTCGCGGAGCGCCGTCCAGGGATG
GTCCTTGGCGGCACTCGGGTACATGGTGGTGGAGAACCCGGAGAACCGAC
GTGCGCTATTGGATTCCGGCGCGGCCGATGCCGTCGTCGCCGCTCTAAAC
GCCCTTCCGGGCGACGCCGACAACGTGCAGACATGGGGGCTGTGGGCGAT
CCTCATGATGGCATCGAGGGATCCTGAAAGCGTCGGCCGGCTGCGCCAGG
CCGGCGCGGAAACGGCCATCATGGCGGCGCTGGCAAACCACCCGAAGCAC
GCCGACGTGCAGGAGTGGGGCGCGGCAGCGAGCGATGCGCTGCTTCAGTT
TTATCTCCGGCCGGCAGAAGCGCCAAAGGTATAATCGGATGTCTAATGTG
TGCAACCCTTTTTCAATATTCAGGAATCATAGCAGAGGAATAATCTGGGC
AGCGGTGCTTACCC back to topCoding sequence (CDS) from alignment at P-wetherbeei_contig1835:3223..4786+ >mRNA_P-wetherbeei_contig1835.2.1 ID=mRNA_P-wetherbeei_contig1835.2.1|Name=mRNA_P-wetherbeei_contig1835.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1218bp|location=Sequence derived from alignment at P-wetherbeei_contig1835:3223..4786+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTTGGAATATTTAGTCGAGAGCTTCGTCGAGGGCTTCTTTCACGGGTT
CAGCAGCTCCAGCCGCCGGCGAGGAGAGACGGGCAATGAGACAATCGGCA
GGCGGAGATTCAAATTCCCCTCCCCAAACCATGTATCTAGAGCGAAGATG
CTGCACGAGAAGGATTTCGTGGCGATCGTGAGCAGCCTGCAAGACAGCAC
AAAAAGTGCTCACGTGCACATGGAATATCTGGAGACGATCCACTCCTTGT
CACAGGTTGGCTCTGGGAATCGTCGCGCGCTGGCACAGGCGGGAGTCGCT
AGCGCGATCGTTGCCGTCTTCGCCACCCACAGCGAGAACGCAGCCGTGCA
ACGCAGCTGTTGCAGAGCCGTCGTCGCTTTTGCCGCAAACGAGCCTGAGA
ACCAGCGGCTGATGCGCGAAGCAGGCGCTGTCGAGACCACCGTCGACGCA
CTGAACTCCCACAGGAGCGACCCGCTTCTGGCCGAATCGGCGCTCGACGC
GATAAGATCGCTTGCGGACGACTGCCTCGAGAACCAGCGCGCTTTTGCGA
CCGCCGGGACCTGCGTTGCCGTCGCCGCCGCCCTGGTGGCCCACGGCGGC
ATCATGCGCACTGCAGAATCTGCGTGCTGGGCCCTCCGCTCGCTCGCCTC
TTGGCCCAAGAACGTGCGGCTGCTGCGGGAAGCCGGGGCCTTCGAGTCCG
TCGTCGCTACGCTGACTTACTACTGCCATGGCGAGCACAACGCCGTCTTG
GAGGCGGCGCTCGGCGCGATCGCGAAGTTCGCCCTCAGCGGTGCGGAGCG
GTACCACCTCCGCAAAATTGGCGCCTGCGACGCCGTGCTGTCGATGCTGC
GGACCAACCTGTCGCGGAGCGCCGTCCAGGGATGGTCCTTGGCGGCACTC
GGGTACATGGTGGTGGAGAACCCGGAGAACCGACGTGCGCTATTGGATTC
CGGCGCGGCCGATGCCGTCGTCGCCGCTCTAAACGCCCTTCCGGGCGACG
CCGACAACGTGCAGACATGGGGGCTGTGGGCGATCCTCATGATGGCATCG
AGGGATCCTGAAAGCGTCGGCCGGCTGCGCCAGGCCGGCGCGGAAACGGC
CATCATGGCGGCGCTGGCAAACCACCCGAAGCACGCCGACGTGCAGGAGT
GGGGCGCGGCAGCGAGCGATGCGCTGCTTCAGTTTTATCTCCGGCCGGCA
GAAGCGCCAAAGGTATAA back to top
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