mRNA_P-wetherbeei_contig1835.1.4 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1835.1.4 vs. uniprot
Match: D7FP69_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP69_ECTSI) HSP 1 Score: 209 bits (533), Expect = 1.910e-57 Identity = 129/282 (45.74%), Postives = 158/282 (56.03%), Query Frame = 1
Query: 94 KAQIWFWTEEGAPFSDQYILMWESRLLRELGKSVETMVLSATRSATQASMDLQEMLKATALSTLMAAIVWPLALISLADMIDTDWTVGCERADLAGVILADALLNREQGCRPVTLVGYSMGARLIFSCLLEMARRD---------------------SGGVRHKLKGRG-------------------------------------------------HDEARPAAGIIENVILFGAPVGVGNDRWERANRIVHGRMINAYSSKDWILGLIYRAKSLSLKVS 729
K ++WFW ++ P +DQY+L WES L LGKSVET++ S ++SA +QE LK T L+ +M ++ WPLALISL+ MID DWT+G ERAD+AG ILADALLNREQGCRPVTLVG S+GARLIF+CL E+ARR + G GRG +EAR AAG+IENV L GAPVG RWER R+ HGR+IN YS D I+GL++RAKSLSL VS
Sbjct: 612 KHRVWFWQDK-LPHTDQYVLRWESDWLVTLGKSVETIIKSLSQSA------MQETLKYTTLAAIMTSLAWPLALISLSSMIDADWTIGRERADVAGKILADALLNREQGCRPVTLVGTSLGARLIFACLEEIARRHELWEEQMMEXXXXXQDHWGCAAAGSSATTAGRGPPRSKMTRLRNAVTPDNRGKSKAGLNGVGVSAGSSXXXXXXXXXXXXXXKNEARCAAGVIENVCLLGAPVGATAARWERVARMAHGRVINGYSKSDVIIGLVFRAKSLSLSVS 886
BLAST of mRNA_P-wetherbeei_contig1835.1.4 vs. uniprot
Match: A0A835Z4D9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4D9_9STRA) HSP 1 Score: 193 bits (491), Expect = 1.010e-55 Identity = 112/210 (53.33%), Postives = 140/210 (66.67%), Query Frame = 1
Query: 130 PFSDQYILMWESRLLRELGKSVETMVLSATRSATQASMDLQEMLKATALSTLMAAIVWPLALISLADMIDTDWTVGCERADLAGVILADALLNREQGCRPVTLVGYSMGARLIFSCLLEMARR----DSGGV------RHKLKGRGHDEARPAAGIIENVILFGAPVGVGNDRWERANRIVHGRMINAYSSKDWILGLIYRAKSLSLKVS 729
P S+Q++L+WES+LL ELG SV + A +A LQ+ L+ TAL L AA+ P+ L++LAD ID+DW +GCERAD AG +LA LL+REQG RPVTL+G S+GARL+FSCL EM RR ++ G R KG G AAGIIEN +L GAPVGV RWER R+VHGR+IN Y KD ILGLIYR + LS+ V+
Sbjct: 2 PHSEQHLLVWESKLLVELGDSVVKALQDAGLTA------LQQGLQFTALGVLAAAVSLPITLVALADYIDSDWAIGCERADKAGKVLAGILLSREQGTRPVTLIGTSIGARLMFSCLEEMVRRHELWEASGKQRASPPRRGRKGGGMGGPCNAAGIIENAVLLGAPVGVSPKRWERVARVVHGRLINGYFKKDGILGLIYRIRRLSVSVA 205
BLAST of mRNA_P-wetherbeei_contig1835.1.4 vs. uniprot
Match: A0A6A3L8H1_9STRA (Uncharacterized protein n=8 Tax=Phytophthora TaxID=4783 RepID=A0A6A3L8H1_9STRA) HSP 1 Score: 171 bits (432), Expect = 3.010e-44 Identity = 100/214 (46.73%), Postives = 130/214 (60.75%), Query Frame = 1
Query: 79 GSNSGKAQIWFWTEEGAPFSDQYILMWESRLLRELGKSVETMVLSATRSATQASMDLQEMLKATALSTLMAAIVWPLALISLADMIDTDWTVGCERADLAGVILADALLNREQGCRPVTLVGYSMGARLIFSCLLEMARRDSGGVRHKLKGRGHDEARPAAGIIENVILFGAPVGVGNDRWERANRIVHGRMINAYSSKDWILGLIYRAKSLSL 720
G+ + W W + P DQY L+WE LR GKS+ T +A + +T A+ E++K TAL+ L AAI P + LAD+ID WTV AD +G +LADAL REQG RPVTL+GY MGARLIFSCL E+A+ DS DEA GI+EN +L G+PV + D W A R+V GR+IN YS KDW+LG++YR + +L
Sbjct: 468 GTKHEPLRAWRWKDR-FPQGDQYCLVWEEAGLRRFGKSMRTF--AAEQVSTYAT---AELVKYTALAALFAAIAIPRVIFRLADIIDNAWTVTMNAADASGKLLADALRQREQGLRPVTLIGYGMGARLIFSCLKELAKSDS-----------LDEA---CGIVENAVLLGSPVPLARDDWTNARRVVSGRLINGYSDKDWMLGIMYRYQGWAL 661
BLAST of mRNA_P-wetherbeei_contig1835.1.4 vs. uniprot
Match: A0A0P1AGM3_PLAHL (Uncharacterized conserved protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AGM3_PLAHL) HSP 1 Score: 168 bits (426), Expect = 1.330e-43 Identity = 97/214 (45.33%), Postives = 124/214 (57.94%), Query Frame = 1
Query: 79 GSNSGKAQIWFWTEEGAPFSDQYILMWESRLLRELGKSVETMVLSATRSATQASMDLQEMLKATALSTLMAAIVWPLALISLADMIDTDWTVGCERADLAGVILADALLNREQGCRPVTLVGYSMGARLIFSCLLEMARRDSGGVRHKLKGRGHDEARPAAGIIENVILFGAPVGVGNDRWERANRIVHGRMINAYSSKDWILGLIYRAKSLSL 720
G+ + W W + P DQY L+WE LR GKS+ T S E++K TAL+ L AA+ P ++ LAD+ID WTV AD AG +LADAL REQG RPVTLVGY MGARLIFSCL E+A+ DS + + GI+EN IL G+PV + D W A R+V GR+IN YS KDW+LG++YR + +L
Sbjct: 421 GTKHEPLRAWRWKDR-FPQGDQYCLIWEEAGLRRFGKSMRTFAAEQVSSYATT-----ELVKYTALAALFAAVAIPRVILRLADIIDNVWTVTMNAADSAGKLLADALRKREQGLRPVTLVGYGMGARLIFSCLKELAKSDSIDL--------------SCGIVENAILLGSPVPMARDDWGNARRVVSGRLINGYSEKDWMLGVMYRYQGWAL 614
BLAST of mRNA_P-wetherbeei_contig1835.1.4 vs. uniprot
Match: D0NN16_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=D0NN16_PHYIT) HSP 1 Score: 165 bits (417), Expect = 3.040e-43 Identity = 96/214 (44.86%), Postives = 130/214 (60.75%), Query Frame = 1
Query: 79 GSNSGKAQIWFWTEEGAPFSDQYILMWESRLLRELGKSVETMVLSATRSATQASMDLQEMLKATALSTLMAAIVWPLALISLADMIDTDWTVGCERADLAGVILADALLNREQGCRPVTLVGYSMGARLIFSCLLEMARRDSGGVRHKLKGRGHDEARPAAGIIENVILFGAPVGVGNDRWERANRIVHGRMINAYSSKDWILGLIYRAKSLSL 720
G+ + W W + P DQY L+WE LR GKS+ T +A + + A+ E++K TAL+ L AA+ P ++ LAD+ID WTV AD +G +LADAL REQG RPVTLVGY MGARLIFSCL E+A+ ++ DE+ GI+EN +L G+PV + D W A R+V GR+IN YS KDW+LG++YR + +L
Sbjct: 263 GTKHEPLRAWRWKDR-FPQGDQYCLIWEEAGLRRFGKSMRTF--AAEQVSNYAT---TEIVKYTALAALFAAVAIPRVILRLADIIDNAWTVTMNAADTSGKLLADALRKREQGLRPVTLVGYGMGARLIFSCLKELAKSET-----------IDES---CGIVENAVLLGSPVPMARDDWANARRVVSGRLINGYSEKDWMLGVMYRYQGWAL 456
BLAST of mRNA_P-wetherbeei_contig1835.1.4 vs. uniprot
Match: A0A2P4Y8C6_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y8C6_9STRA) HSP 1 Score: 156 bits (394), Expect = 9.520e-43 Identity = 88/189 (46.56%), Postives = 116/189 (61.38%), Query Frame = 1
Query: 154 MWESRLLRELGKSVETMVLSATRSATQASMDLQEMLKATALSTLMAAIVWPLALISLADMIDTDWTVGCERADLAGVILADALLNREQGCRPVTLVGYSMGARLIFSCLLEMARRDSGGVRHKLKGRGHDEARPAAGIIENVILFGAPVGVGNDRWERANRIVHGRMINAYSSKDWILGLIYRAKSLSL 720
MWE LR GKS+ T +A + + A+ E++K TAL+ L AA+ P ++ LAD+ID WTV AD +G +LADAL REQG RPVTL+GY MGARLIFSCL E+A+ DS + GI+EN +L G+PV + W A R+V GR+IN YS KDW+LG++YR + SL
Sbjct: 1 MWEEAGLRRFGKSMRTF--AAEQVSNYAT---TEIVKYTALAALFAAVTIPRVILRLADIIDNAWTVTMNAADTSGKLLADALRKREQGLRPVTLIGYGMGARLIFSCLKELAKSDS--------------INESCGIVENAVLLGSPVPTAREDWANARRVVSGRLINGYSDKDWMLGVMYRYQGWSL 170
BLAST of mRNA_P-wetherbeei_contig1835.1.4 vs. uniprot
Match: A0A7S2RYC4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RYC4_9STRA) HSP 1 Score: 163 bits (412), Expect = 1.110e-42 Identity = 93/226 (41.15%), Postives = 131/226 (57.96%), Query Frame = 1
Query: 100 QIWFWTEEGAPFSDQYILMWESRLLRELGKSVETMVLSATRSATQASMDLQEMLKATALSTLMAAIVWPLALISLADMIDTDWTVGCERADLAGVILADALLNREQGCRPVTLVGYSMGARLIFSCL----------LEMARRDSGGVRHKLKGRGHDEAR------PAAGIIENVILFGAPVGVGNDRWERANRIVHGRMINAYSSKDWILGLIYRAKSLSLKVS 729
Q+WFW++ ++QY L WES L LG SV ++ SA+ +A + E+ T + ++AA+ WP +I D ID WT+ CERADLAG +LA+ LL R G RPVTL+GYSMGARLIFSCL L + ++ + RG DE P AG++E+V+L G PV G+ +W +IV GR++N YS+ DW LG++YR + S V+
Sbjct: 185 QVWFWSQRFHG-TEQYYLRWESATLTTLGSSVMELIQSASTAAAR------EVATYTVFAAVVAAVAWPYYIIKAFDSIDPIWTLACERADLAGQLLAETLLERAHGSRPVTLIGYSMGARLIFSCLRTLRQKHETWLAEVQEETAALEPHGSNRGADERSAMFKNSPVAGLVEDVVLMGTPVPCGS-QWTEVAKIVGGRLVNCYSATDWTLGILYRYQRWSTTVA 402
BLAST of mRNA_P-wetherbeei_contig1835.1.4 vs. uniprot
Match: V9F603_PHYPR (Uncharacterized protein n=12 Tax=Phytophthora TaxID=4783 RepID=V9F603_PHYPR) HSP 1 Score: 164 bits (416), Expect = 4.300e-42 Identity = 95/214 (44.39%), Postives = 130/214 (60.75%), Query Frame = 1
Query: 79 GSNSGKAQIWFWTEEGAPFSDQYILMWESRLLRELGKSVETMVLSATRSATQASMDLQEMLKATALSTLMAAIVWPLALISLADMIDTDWTVGCERADLAGVILADALLNREQGCRPVTLVGYSMGARLIFSCLLEMARRDSGGVRHKLKGRGHDEARPAAGIIENVILFGAPVGVGNDRWERANRIVHGRMINAYSSKDWILGLIYRAKSLSL 720
G+ + W W + P DQY L+WE LR GKS+ T +A + + A+ E++K TAL+ L AA+ P ++ LAD+ID WTV AD +G +LADAL REQG RPVTL+GY MGARLIFSCL E+A+ ++ DE+ GI+EN +L G+PV + D W A R+V GR+IN YS KDW+LG++YR + +L
Sbjct: 449 GTKHEPLRAWRWKDR-FPQGDQYCLIWEEAGLRRFGKSMRTF--AAEQVSNYAT---TEIVKYTALAALFAAVAIPRVILRLADIIDNAWTVTMNAADTSGKLLADALRKREQGLRPVTLIGYGMGARLIFSCLKELAKSET-----------IDES---CGIVENAVLLGSPVPMARDDWANARRVVSGRLINGYSDKDWMLGVMYRYQGWAL 642
BLAST of mRNA_P-wetherbeei_contig1835.1.4 vs. uniprot
Match: H3GKH9_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GKH9_PHYRM) HSP 1 Score: 164 bits (415), Expect = 5.340e-42 Identity = 98/214 (45.79%), Postives = 131/214 (61.21%), Query Frame = 1
Query: 79 GSNSGKAQIWFWTEEGAPFSDQYILMWESRLLRELGKSVETMVLSATRSATQASMDLQEMLKATALSTLMAAIVWPLALISLADMIDTDWTVGCERADLAGVILADALLNREQGCRPVTLVGYSMGARLIFSCLLEMARRDSGGVRHKLKGRGHDEARPAAGIIENVILFGAPVGVGNDRWERANRIVHGRMINAYSSKDWILGLIYRAKSLSL 720
G+ + W W + P DQY L+WE LR GKS+ T +A + + A+ E++K TAL+ L AA+ P ++ LAD+ID WTV AD +G +LA+AL REQG RPVTLVGY MGARLIFSCL E+A+ SG + DE+ GI+EN +L G+PV + D W A R+V GR+IN YS KDW+LG++YR + SL
Sbjct: 437 GTKHEPLRAWRWKDR-FPQGDQYCLVWEEAGLRRFGKSMRTF--AAEQVSNYAT---TEIVKYTALAALFAAVAIPRVILRLADIIDNAWTVTMNAADTSGKLLANALRQREQGLRPVTLVGYGMGARLIFSCLKELAK--SGSL---------DES---CGIVENAVLLGSPVPLARDDWANARRVVSGRLINGYSDKDWMLGVMYRYQGWSL 630
BLAST of mRNA_P-wetherbeei_contig1835.1.4 vs. uniprot
Match: K3WME1_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WME1_GLOUD) HSP 1 Score: 160 bits (406), Expect = 5.620e-42 Identity = 90/207 (43.48%), Postives = 122/207 (58.94%), Query Frame = 1
Query: 100 QIWFWTEEGAPFSDQYILMWESRLLRELGKSVETMVLSATRSATQASMDLQEMLKATALSTLMAAIVWPLALISLADMIDTDWTVGCERADLAGVILADALLNREQGCRPVTLVGYSMGARLIFSCLLEMARRDSGGVRHKLKGRGHDEARPAAGIIENVILFGAPVGVGNDRWERANRIVHGRMINAYSSKDWILGLIYRAKSLSL 720
+ W W + DQY+LMWE LLR+ G+S+ + + A E++K TAL+TL AA+ P ++ LADMID W + AD +G +LA +L REQG RPVTLVGY MGARLIF+CL E+A+ DE GI+EN +L G+PV V N W+ A R+V GR+IN YS DW+LG++YR + +L
Sbjct: 231 RAWRWKDRFQQ-GDQYVLMWEEALLRKFGRSMRSFAREQVMTYANA-----EIVKYTALATLFAAVAIPRTILRLADMIDNVWVLAMNAADASGKLLAQSLQRREQGLRPVTLVGYGMGARLIFACLKELAKTP-------------DEC---CGIVENAVLLGSPVPVVNQDWQNARRVVSGRLINGYSENDWMLGVMYRYQGWAL 415 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1835.1.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1835.1.4 >prot_P-wetherbeei_contig1835.1.4 ID=prot_P-wetherbeei_contig1835.1.4|Name=mRNA_P-wetherbeei_contig1835.1.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=289bp MQEGDANGSNSGKAQIWFWTEEGAPFSDQYILMWESRLLRELGKSVETMVback to top mRNA from alignment at P-wetherbeei_contig1835:599..2722+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1835.1.4 ID=mRNA_P-wetherbeei_contig1835.1.4|Name=mRNA_P-wetherbeei_contig1835.1.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2124bp|location=Sequence derived from alignment at P-wetherbeei_contig1835:599..2722+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1835:599..2722+ >mRNA_P-wetherbeei_contig1835.1.4 ID=mRNA_P-wetherbeei_contig1835.1.4|Name=mRNA_P-wetherbeei_contig1835.1.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=867bp|location=Sequence derived from alignment at P-wetherbeei_contig1835:599..2722+ (Phaeothamnion wetherbeei SAG_119_79)back to top |