mRNA_P-wetherbeei_contig18345.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig18345.1.1
Unique NamemRNA_P-wetherbeei_contig18345.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig18345.1.1 vs. uniprot
Match: A0A6P2CSR5_9BACT (Uncharacterized protein n=1 Tax=Gemmata massiliana TaxID=1210884 RepID=A0A6P2CSR5_9BACT)

HSP 1 Score: 250 bits (638), Expect = 9.160e-74
Identity = 121/168 (72.02%), Postives = 137/168 (81.55%), Query Frame = 1
Query:    1 PADTHAVVALLLHARPRRVLEIGTAAGHMTANLTAFTPPDATVFSLGIVAEDGPRSGTPHQTYEVPTRAQFARHLNHFGTAHKALLVTADSRAYDFARLAPLDFVFVDGGHDRATATADSRAAYQALRPGGLLVWHDVPSPTPWVEVEAAIAAIAFPETVTRVTGTQV 504
            P D HAV+AL+ H   RR+LEIGTAAGHMTANLTAFTPPDA V+S+G+VAE GPRSG+PHQ YEVP R QFAR +NHFGT +KA L+ ADSRA+DFARL PLD  FVDGGHD  TA +DS  AY+ALRPGG LVWHD+PS TPWVEVE A+A + FPE V RV GTQV
Sbjct:  585 PHDAHAVLALVAHLGARRILEIGTAAGHMTANLTAFTPPDAVVYSIGLVAEGGPRSGSPHQEYEVPRRDQFARFVNHFGTGYKARLIAADSRAFDFARLGPLDLAFVDGGHDLGTARSDSLGAYRALRPGGCLVWHDLPSRTPWVEVERAVAGLGFPEPVYRVAGTQV 752          
BLAST of mRNA_P-wetherbeei_contig18345.1.1 vs. uniprot
Match: A0A225DDU5_9BACT (Glycosyl transferase, group 2 family protein n=1 Tax=Fimbriiglobus ruber TaxID=1908690 RepID=A0A225DDU5_9BACT)

HSP 1 Score: 209 bits (531), Expect = 2.280e-59
Identity = 106/170 (62.35%), Postives = 125/170 (73.53%), Query Frame = 1
Query:    1 PADTHAVVALLLHARPRRVLEIGTAAGHMTANLTAFTPPDATVFSLGIVAEDGPRSGTPH-QTYEVPTRAQFARHLNHFGTAHKALLVTADSRAYDFARLAPLDFVFVDGGHDRATATADSRAAYQALRPGGLLVWHDVPSPTPWVEVEAAIAAIAFPETVTRVTGTQVA 507
            PADT AV+ L+ H RP RVLEIGTAAGHMTANLTA+TPPDA +FSLG+V++  P  G    Q  E+P RA FARH +HF T HKA L+ ADSR ++F RLAPLD VFVDGGHD  TA +DS  AY ALRPGG L+WHD  S T WV+V  A+A++ FPE V    GT+VA
Sbjct:  583 PADTRAVLTLVAHVRPLRVLEIGTAAGHMTANLTAWTPPDAVIFSLGVVSDGPPPGGAKDGQAPEIPPRAAFARHADHFRTGHKARLIVADSRTFEFDRLAPLDLVFVDGGHDFPTARSDSLEAYNALRPGGCLIWHDWGSRTAWVKVREAVASLGFPEPVYHPAGTEVA 752          
BLAST of mRNA_P-wetherbeei_contig18345.1.1 vs. uniprot
Match: A0A5B9WCS3_9BACT (SPBc2 prophage-derived glycosyltransferase SunS n=2 Tax=Aquisphaera giovannonii TaxID=406548 RepID=A0A5B9WCS3_9BACT)

HSP 1 Score: 194 bits (494), Expect = 1.810e-54
Identity = 102/170 (60.00%), Postives = 118/170 (69.41%), Query Frame = 1
Query:    4 ADTHAVVALLLHARPRRVLEIGTAAGHMTANLTAFTPPDATVFSLGIVAEDGPRS--GTPHQTYEVPTRAQFARHLNHFGTAHKALLVTADSRAYDFARLAPLDFVFVDGGHDRATATADSRAAYQALRPGGLLVWHDVPSPTPWVEVEAAIAAIAFPETVTRVTGTQVA 507
            ADT AV+ LL HARP R+LE+GTA GHMTANLT ++P DA VF++ +V    PR+  G   Q  EVP  A+  R  +HFG  HKA  +TADS  YDF RLAPLDF F+DGGHD A ATADSR AY AL PGG LVWHD  SP PWVEV  A+ AI F E V  + GT+VA
Sbjct:   39 ADTAAVLTLLCHARPARILEVGTALGHMTANLTRWSPEDAQVFTIDLV-RGMPRAAAGAAEQLAEVPALAERGRFADHFGAVHKAFFITADSLGYDFGRLAPLDFAFIDGGHDFAHATADSRKAYDALAPGGWLVWHDFGSPVPWVEVRQAVEAIGFDEPVIHIEGTEVA 207          
BLAST of mRNA_P-wetherbeei_contig18345.1.1 vs. uniprot
Match: UPI0013EE3473 (class I SAM-dependent methyltransferase n=1 Tax=Aquisphaera sp. JC669 TaxID=2712864 RepID=UPI0013EE3473)

HSP 1 Score: 178 bits (452), Expect = 2.640e-54
Identity = 92/148 (62.16%), Postives = 106/148 (71.62%), Query Frame = 1
Query:    4 ADTHAVVALLLHARPRRVLEIGTAAGHMTANLTAFTPPDATVFSLGIVAEDGPRS--GTPHQTYEVPTRAQFARHLNHFGTAHKALLVTADSRAYDFARLAPLDFVFVDGGHDRATATADSRAAYQALRPGGLLVWHDVPSPTPWVEV 441
            ADT AV+ LL HARP R+LE+GTA GHMTANLT ++P DA VF++ +V    PR+  G   Q  EVPT A+  R  +HFGT HKAL +TADS  YD  RLAPLDF F+DGGHD + A ADSR AY AL PGG LVWHD  SP PWVEV
Sbjct:   28 ADTTAVLTLLSHARPNRILEVGTALGHMTANLTRWSPEDARVFTIDLV-RGMPRAAAGASEQLAEVPTLAERGRFADHFGTVHKALFITADSLGYDLGRLAPLDFAFIDGGHDFSHALADSRKAYDALAPGGWLVWHDFGSPVPWVEV 174          
BLAST of mRNA_P-wetherbeei_contig18345.1.1 vs. uniprot
Match: UPI0013E9FA01 (class I SAM-dependent methyltransferase n=1 Tax=Aquisphaera sp. JC669 TaxID=2712864 RepID=UPI0013E9FA01)

HSP 1 Score: 177 bits (448), Expect = 1.510e-53
Identity = 90/148 (60.81%), Postives = 106/148 (71.62%), Query Frame = 1
Query:    4 ADTHAVVALLLHARPRRVLEIGTAAGHMTANLTAFTPPDATVFSLGIVAEDGPRS--GTPHQTYEVPTRAQFARHLNHFGTAHKALLVTADSRAYDFARLAPLDFVFVDGGHDRATATADSRAAYQALRPGGLLVWHDVPSPTPWVEV 441
            ADT A++ LL H+RP R+LE+GTA GHMTA+LT ++P DA VF+L +V    PR+  G   Q  EVPT A+  R  +HFGT HKA  +TADS  YDF RLAPLDF F+DGGHD + A ADSR AY AL PGG LVWHD  SP PWVEV
Sbjct:   39 ADTSAILGLLCHSRPSRILEVGTALGHMTADLTRWSPEDAMVFTLDLV-RGMPRAATGASEQLAEVPTLAERGRFADHFGTVHKAFFITADSLGYDFGRLAPLDFAFIDGGHDFSHALADSRKAYDALAPGGWLVWHDFGSPVPWVEV 185          
BLAST of mRNA_P-wetherbeei_contig18345.1.1 vs. uniprot
Match: UPI001B3237A9 (Glycosyltransferase n=2 Tax=Gemmata palustris TaxID=2822762 RepID=UPI001B3237A9)

HSP 1 Score: 150 bits (378), Expect = 8.730e-39
Identity = 88/169 (52.07%), Postives = 101/169 (59.76%), Query Frame = 1
Query:    1 PADTHAVVALLLHARPRRVLEIGTAAGHMTANLTAFTPPDATVFSLGIVAEDGPRSGTPHQTYEVPTRAQFARHLNHFGTAHKALLVTADSRAYDFARLAPLDFVFVDGGHDRATATADSRAAYQALRPGGLLVWHDVPSPTPWVEVEAAIAAIAFPETVTRVTGTQVA 507
            P DTHAV+AL LH R RRVLEIG A G M  NLTAFT PDA V++L            PH    V  R       +  GTAHKA  +TAD R +DFARL  LD V +DG  DRA   A +R AY ALRPGG LV H+ P P P  +VE  +AA+  PE V RV GT+VA
Sbjct:  600 PLDTHAVLALALHVRARRVLEIGPAPGSMVDNLTAFTAPDAVVYTLATA---------PHPADAV-RRDPAPESADPSGTAHKAQFLTADPRHFDFARLGTLDLVLLDGARDRAAGGAGARGAYPALRPGGCLVLHEPPGPAPQSDVEQGLAALGLPEPVYRVAGTRVA 758          
BLAST of mRNA_P-wetherbeei_contig18345.1.1 vs. uniprot
Match: A0A2Z3GZB4_9BACT (Uncharacterized protein n=1 Tax=Gemmata obscuriglobus TaxID=114 RepID=A0A2Z3GZB4_9BACT)

HSP 1 Score: 103 bits (258), Expect = 1.160e-22
Identity = 72/171 (42.11%), Postives = 87/171 (50.88%), Query Frame = 1
Query:    1 PADTHAVVALLLHARPRRVLEIGTAAGHMTANLTAFTPPDATVFSLGIVAED--GPRSGTPHQTYEVPTRAQFARHLNHFGTAHKALLVTADSRAYDFARLAPLDFVFVDGGHDRATATADSRAAYQALRPGGLLVWHDVPSPTPWVEVEAAIAAIAFPETVTRVTGTQVA 507
            PAD   V+AL+ H  PRRVL IGTAAG ++A++TA  PPDA V+ LG  A D  GP                 AR  N  GTA     V A +  ++   LAPLD   V  G       + +  AY ALRPGG L+W D P      + E A  A  FPE V  VTGT+VA
Sbjct:  599 PADVRVVLALVAHFAPRRVLAIGTAAGRLSADVTAIAPPDAAVYVLGAPAGDPLGP----------------VARARNRIGTAQGMRFVGATNDHFEVGNLAPLDLAIVGTGSTPTPGRSHAVGAYNALRPGGCLIWPDPPE---LFDGEWAAWAGGFPEPVYGVTGTRVA 750          
BLAST of mRNA_P-wetherbeei_contig18345.1.1 vs. uniprot
Match: A0A7Y5Q8I4_9BACT (Class I SAM-dependent methyltransferase n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7Y5Q8I4_9BACT)

HSP 1 Score: 73.6 bits (179), Expect = 1.300e-12
Identity = 47/133 (35.34%), Postives = 66/133 (49.62%), Query Frame = 1
Query:   43 RPRRVLEIGTAAGHMTANLTAFTPPDATVFSLGIVAEDGPRSGTPHQTYEVPTRAQFARHLNHFGTAHKALLVTADSRAYDFARL-APLDFVFVDGGHDRATATADSRAAYQALRPGGLLVWHDVPSPTPWVE 438
            +PRR++EIG AAG  T NL A  P  A + ++ +  E    + +    Y      Q  R       A +  L+ ADS  +D++     +D +F+DG HD  +  ADS  A   LRPGGL+ WHD      WVE
Sbjct:  107 QPRRIVEIGVAAGRTTINLAAQAP-QAEIIAVDLPPEAPEAADSAGPDYRQLGLEQPGRLFLGQPAAERITLLLADSTRHDWSAYHGSVDLIFIDGAHDYQSVKADSENALAMLRPGGLIFWHDYS----WVE 234          
BLAST of mRNA_P-wetherbeei_contig18345.1.1 vs. uniprot
Match: A0A2G4IW18_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2G4IW18_9PLAN)

HSP 1 Score: 64.7 bits (156), Expect = 2.020e-9
Identity = 45/124 (36.29%), Postives = 61/124 (49.19%), Query Frame = 1
Query:   43 RPRRVLEIGTAAGHMTANLTAFTPPDATVFSLGIVAEDGPRSGTPHQTYEVPTRAQFARHLNHFGTAHKALLVTADSRAYDFARL-APLDFVFVDGGHDRATATADSRAAYQALRPGGLLVWHD 411
            RP+R+ E GT  G  T  L A +P  A+V +L I    GP+S      Y +  +     H  HF +  K L+   DSR  D +     +D VFVD  H    A  D+  A+  LR GG++VWHD
Sbjct:  102 RPQRIFEFGTFTGGSTLVLAANSPTHASVVTLDI----GPQS-----LYGMEYQPGGLCHGTHFASRIKQLI--GDSRQLDLSEYRGTMDLVFVDANHTYPYARNDTNIAFDMLRAGGVIVWHD 214          
BLAST of mRNA_P-wetherbeei_contig18345.1.1 vs. uniprot
Match: A0A519CSY4_9EURY (Uncharacterized protein n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A519CSY4_9EURY)

HSP 1 Score: 62.8 bits (151), Expect = 5.500e-9
Identity = 43/138 (31.16%), Postives = 62/138 (44.93%), Query Frame = 1
Query:   43 RPRRVLEIGTAAGHMTANLTAFTPPDATVFSLGIVAEDGPRSGTPHQTYEVPTRAQFARHLNHFGTAHKALLVTADSRAYDFAR-LAPLDFVFVDGGHDRATATADSRAAYQALRPGGLLVWHDVPSPTPWVEVEAAI 453
            +P+++ EIGT  G  T N+    P D  V +L +   +      P +  E     +  R   H         +  DS  YDF   +  +DF+FVDG H       DS+ AY  +R GG ++WHD  SP  W  V  A+
Sbjct:   45 KPKKIFEIGTFNGRTTINMALNQPKDGEVVTLDLPTNETKLPLAPSE--EKYILGKDGRRQTHAQIKQ----IYGDSADYDFTDYIDRIDFMFVDGSHSYEYTMNDSKLAYNLVRRGGYILWHDYDSPY-WPGVTEAL 175          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18345.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
A0A6P2CSR5_9BACT9.160e-7472.02Uncharacterized protein n=1 Tax=Gemmata massiliana... [more]
A0A225DDU5_9BACT2.280e-5962.35Glycosyl transferase, group 2 family protein n=1 T... [more]
A0A5B9WCS3_9BACT1.810e-5460.00SPBc2 prophage-derived glycosyltransferase SunS n=... [more]
UPI0013EE34732.640e-5462.16class I SAM-dependent methyltransferase n=1 Tax=Aq... [more]
UPI0013E9FA011.510e-5360.81class I SAM-dependent methyltransferase n=1 Tax=Aq... [more]
UPI001B3237A98.730e-3952.07Glycosyltransferase n=2 Tax=Gemmata palustris TaxI... [more]
A0A2Z3GZB4_9BACT1.160e-2242.11Uncharacterized protein n=1 Tax=Gemmata obscuriglo... [more]
A0A7Y5Q8I4_9BACT1.300e-1235.34Class I SAM-dependent methyltransferase n=1 Tax=Ar... [more]
A0A2G4IW18_9PLAN2.020e-936.29Uncharacterized protein n=1 Tax=Planctomycetaceae ... [more]
A0A519CSY4_9EURY5.500e-931.16Uncharacterized protein n=1 Tax=Euryarchaeota arch... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18345contigP-wetherbeei_contig18345:42..548 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1089551.KE386572_gene1279
PFAMsABC_tran,Wzt_C
Model size507
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K09689,ko:K09691
KEGG TC3.A.1.101,3.A.1.103
KEGG Pathwayko02010,map02010
KEGG ModuleM00249,M00250
Hectar predicted targeting categoryother localisation
Exons1
Evalue9.6e-11
EggNOG OGsCOG1134@1|root,COG4122@1|root,COG1134@2|Bacteria,COG4122@2|Bacteria,1MWWC@1224|Proteobacteria,2TU3M@28211|Alphaproteobacteria,4BQZA@82117|unclassified Alphaproteobacteria
EC3.6.3.38
DescriptionATPases associated with a variety of cellular activities
Cds size507
COG categoryGM
BRITEko00000,ko00001,ko00002,ko01000,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186143.3794382-CDS-P-wetherbeei_contig18345:41..5481683186143.3794382-CDS-P-wetherbeei_contig18345:41..548Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig18345 42..548 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18345.1.1prot_P-wetherbeei_contig18345.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig18345 42..548 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig18345.1.1

>prot_P-wetherbeei_contig18345.1.1 ID=prot_P-wetherbeei_contig18345.1.1|Name=mRNA_P-wetherbeei_contig18345.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=169bp
PADTHAVVALLLHARPRRVLEIGTAAGHMTANLTAFTPPDATVFSLGIVA
EDGPRSGTPHQTYEVPTRAQFARHLNHFGTAHKALLVTADSRAYDFARLA
PLDFVFVDGGHDRATATADSRAAYQALRPGGLLVWHDVPSPTPWVEVEAA
IAAIAFPETVTRVTGTQVA
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mRNA from alignment at P-wetherbeei_contig18345:42..548+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig18345.1.1 ID=mRNA_P-wetherbeei_contig18345.1.1|Name=mRNA_P-wetherbeei_contig18345.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=507bp|location=Sequence derived from alignment at P-wetherbeei_contig18345:42..548+ (Phaeothamnion wetherbeei SAG_119_79)
CCCGCGGACACCCACGCGGTCGTCGCCCTGCTGCTCCACGCCCGCCCGCG CCGGGTGCTCGAGATCGGCACCGCGGCCGGGCACATGACCGCCAACCTGA CCGCCTTCACCCCGCCCGACGCCACCGTGTTCTCGCTCGGCATCGTGGCC GAGGACGGCCCCCGGTCCGGCACCCCGCACCAGACCTACGAGGTCCCCAC CCGGGCCCAGTTCGCCCGCCACCTGAACCACTTCGGCACCGCCCACAAGG CCCTGCTCGTCACCGCCGACTCCCGGGCCTACGACTTCGCCCGCCTGGCC CCGCTCGACTTCGTGTTCGTCGACGGGGGCCACGACCGGGCCACCGCCAC CGCCGACTCCCGGGCCGCCTACCAGGCGCTGCGCCCGGGCGGCCTCCTCG TGTGGCACGACGTCCCGAGCCCGACCCCGTGGGTCGAGGTCGAGGCCGCC ATCGCCGCTATCGCCTTTCCCGAGACCGTGACCCGGGTGACCGGCACCCA GGTCGCG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig18345:42..548+

>mRNA_P-wetherbeei_contig18345.1.1 ID=mRNA_P-wetherbeei_contig18345.1.1|Name=mRNA_P-wetherbeei_contig18345.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=507bp|location=Sequence derived from alignment at P-wetherbeei_contig18345:42..548+ (Phaeothamnion wetherbeei SAG_119_79)
CCCGCGGACACCCACGCGGTCGTCGCCCTGCTGCTCCACGCCCGCCCGCG
CCGGGTGCTCGAGATCGGCACCGCGGCCGGGCACATGACCGCCAACCTGA
CCGCCTTCACCCCGCCCGACGCCACCGTGTTCTCGCTCGGCATCGTGGCC
GAGGACGGCCCCCGGTCCGGCACCCCGCACCAGACCTACGAGGTCCCCAC
CCGGGCCCAGTTCGCCCGCCACCTGAACCACTTCGGCACCGCCCACAAGG
CCCTGCTCGTCACCGCCGACTCCCGGGCCTACGACTTCGCCCGCCTGGCC
CCGCTCGACTTCGTGTTCGTCGACGGGGGCCACGACCGGGCCACCGCCAC
CGCCGACTCCCGGGCCGCCTACCAGGCGCTGCGCCCGGGCGGCCTCCTCG
TGTGGCACGACGTCCCGAGCCCGACCCCGTGGGTCGAGGTCGAGGCCGCC
ATCGCCGCTATCGCCTTTCCCGAGACCGTGACCCGGGTGACCGGCACCCA
GGTCGCG
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