mRNA_P-wetherbeei_contig18323.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig18323.1.1
Unique NamemRNA_P-wetherbeei_contig18323.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig18323.1.1 vs. uniprot
Match: A0A8H4PD85_9HYPO (Pfs domain-containing n=1 Tax=Fusarium albosuccineum TaxID=1237068 RepID=A0A8H4PD85_9HYPO)

HSP 1 Score: 65.9 bits (159), Expect = 1.730e-10
Identity = 36/94 (38.30%), Postives = 53/94 (56.38%), Query Frame = 1
Query:   10 SQTQIFRSQ---GSTALHWAAYFGHKDACQMLIDAGADRASRNKAGATPLHSACECC------RSSVVVYLVESCGADLTAADENGQTPIDRVV 264
            S+T +   Q   GSTALHWAA+FGH DA ++L+  GA  +SRN  G TP+H  C+C       + ++   L++    D+ A D +G TP    +
Sbjct:  484 SRTCLIEEQANNGSTALHWAAHFGHLDAVRLLLREGARASSRNFGGRTPMHILCKCVYADPDTKEAIGHLLLQEKNVDVDAQDNSGWTPAWNAI 577          
BLAST of mRNA_P-wetherbeei_contig18323.1.1 vs. uniprot
Match: C5LLE7_PERM5 (Ankyrin repeat-containing protein YAR1, putative n=2 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5LLE7_PERM5)

HSP 1 Score: 56.2 bits (134), Expect = 8.500e-8
Identity = 28/57 (49.12%), Postives = 35/57 (61.40%), Query Frame = 1
Query:   31 SQGSTALHWAAYFGHKDACQMLIDAGADRASRNKAGATPLHSACECCRSSVVVYLVE 201
            SQG+T LHWAA  GH D C++L+DAGAD  + NKA  TP   A       V +YL +
Sbjct:   83 SQGNTPLHWAALNGHLDVCKLLVDAGADATTVNKAKHTPYDEALSRHFQEVCIYLAK 139          
BLAST of mRNA_P-wetherbeei_contig18323.1.1 vs. uniprot
Match: A0A6M4IXU9_9BACT (Ankyrin repeat domain-containing protein n=1 Tax=Gemmatimonas groenlandica TaxID=2732249 RepID=A0A6M4IXU9_9BACT)

HSP 1 Score: 56.6 bits (135), Expect = 1.710e-7
Identity = 36/83 (43.37%), Postives = 45/83 (54.22%), Query Frame = 1
Query:   31 SQGSTALHWAAYFGHKDACQMLIDAGA--DRASRNKAGATPLHSACECCRSSVVVYLVESCGADLTAADENGQTPIDRVVAAG 273
            S G T LH AA+FG  DA  +LID GA  D  S N    +PLH+A       V+V  +   GAD+TA D +G TP+    A G
Sbjct:   94 SDGWTPLHLAAFFGRDDAVTLLIDHGAPLDAHSTNALRNSPLHAALAGNTLPVLVRRLVFAGADVTARDSHGNTPLHLAAARG 176          
BLAST of mRNA_P-wetherbeei_contig18323.1.1 vs. uniprot
Match: A0A7J6ME09_PERCH (Uncharacterized protein n=1 Tax=Perkinsus chesapeaki TaxID=330153 RepID=A0A7J6ME09_PERCH)

HSP 1 Score: 55.5 bits (132), Expect = 1.800e-7
Identity = 28/56 (50.00%), Postives = 34/56 (60.71%), Query Frame = 1
Query:   34 QGSTALHWAAYFGHKDACQMLIDAGADRASRNKAGATPLHSACECCRSSVVVYLVE 201
            QG+T LHWAA  GH D C++L+DAGAD  + NKA  TP   A       V VYL +
Sbjct:   84 QGNTPLHWAALNGHLDVCKILVDAGADATTLNKAKRTPYDEALSRHFQDVCVYLAK 139          
BLAST of mRNA_P-wetherbeei_contig18323.1.1 vs. uniprot
Match: A0A821MVX7_9NEOB ((mimic poison frog) hypothetical protein n=1 Tax=Ranitomeya imitator TaxID=111125 RepID=A0A821MVX7_9NEOB)

HSP 1 Score: 52.4 bits (124), Expect = 5.760e-7
Identity = 30/77 (38.96%), Postives = 46/77 (59.74%), Query Frame = 1
Query:   22 IFRSQGSTALHWAAYFGHKDACQMLIDAGADRASRNKAGATPLHSACECCRSSVVVYLVESCGADLTAADENGQTPI 252
            + R+ G TALH AA+ GH+  CQ+L+DAGA  + R+  G TPL  A     S +  YL E+C A    ++++ +T +
Sbjct:    2 VDRTTGETALHKAAFQGHRHVCQILVDAGACLSKRDFKGQTPLEIAQNTGDSELASYL-ETCQAKQLLSNDDLETAV 77          
BLAST of mRNA_P-wetherbeei_contig18323.1.1 vs. uniprot
Match: UPI001D1565E5 (ankyrin repeat domain-containing protein n=1 Tax=Brevibacillus borstelensis TaxID=45462 RepID=UPI001D1565E5)

HSP 1 Score: 54.7 bits (130), Expect = 1.200e-6
Identity = 33/83 (39.76%), Postives = 46/83 (55.42%), Query Frame = 1
Query:    7 PSQTQIFRSQGSTALHWAAYFGHKDACQMLIDAGAD--RASRNKAGATPLHSACECCRSSVVVYLVESCGADLTAADENGQTP 249
            P+    + + G TAL  AAY GHKD  + L++ GAD  RAS+N     PLHSA    +  V   L++  GA++ A  + G TP
Sbjct:  158 PNLVNAYANDGFTALGLAAYLGHKDIVEYLLEKGADVNRASKNDMKVMPLHSAVATLQVDVAELLLKH-GAEVNAIQQGGWTP 239          
BLAST of mRNA_P-wetherbeei_contig18323.1.1 vs. uniprot
Match: A0A6A6BEA9_9PEZI (NACHT domain-containing protein n=1 Tax=Aplosporella prunicola CBS 121167 TaxID=1176127 RepID=A0A6A6BEA9_9PEZI)

HSP 1 Score: 54.7 bits (130), Expect = 1.500e-6
Identity = 33/82 (40.24%), Postives = 45/82 (54.88%), Query Frame = 1
Query:   37 GSTALHWAAYFGHKDACQMLIDAGADRASRNKAGATPLHSAC----ECCRSSVVVYLVESCGADLTAADENGQTPIDRVVAA 270
            G T LHWA    ++ + + LI  GAD   ++  GATPLH A     +   S +V YLV   GADLTA +  G+TP+   + A
Sbjct: 1115 GRTLLHWAVVKRYQSSVEKLIALGADTEVKDANGATPLHEAAMGATKYTGSELVKYLVVQGGADLTAENNCGKTPLAVAIEA 1196          
BLAST of mRNA_P-wetherbeei_contig18323.1.1 vs. uniprot
Match: A0A8J1MPU9_XENLA (Diacylglycerol kinase n=1 Tax=Xenopus laevis TaxID=8355 RepID=A0A8J1MPU9_XENLA)

HSP 1 Score: 53.5 bits (127), Expect = 3.780e-6
Identity = 30/75 (40.00%), Postives = 45/75 (60.00%), Query Frame = 1
Query:   28 RSQGSTALHWAAYFGHKDACQMLIDAGADRASRNKAGATPLHSACECCRSSVVVYLVESCGADLTAADENGQTPI 252
            R+ G TALH AA+ GH+  CQ+L+DAGA    ++  G TP   A E   S +  YL ++C A L  ++E+ +T +
Sbjct:  901 RANGETALHKAAFHGHRWVCQILVDAGACVIKKDAKGKTPYDKAQEAGDSELASYL-DTCQAKLLLSNEDLETAV 974          
BLAST of mRNA_P-wetherbeei_contig18323.1.1 vs. uniprot
Match: A0A8J1MR13_XENLA (Diacylglycerol kinase n=1 Tax=Xenopus laevis TaxID=8355 RepID=A0A8J1MR13_XENLA)

HSP 1 Score: 53.5 bits (127), Expect = 3.780e-6
Identity = 30/75 (40.00%), Postives = 45/75 (60.00%), Query Frame = 1
Query:   28 RSQGSTALHWAAYFGHKDACQMLIDAGADRASRNKAGATPLHSACECCRSSVVVYLVESCGADLTAADENGQTPI 252
            R+ G TALH AA+ GH+  CQ+L+DAGA    ++  G TP   A E   S +  YL ++C A L  ++E+ +T +
Sbjct:  902 RANGETALHKAAFHGHRWVCQILVDAGACVIKKDAKGKTPYDKAQEAGDSELASYL-DTCQAKLLLSNEDLETAV 975          
BLAST of mRNA_P-wetherbeei_contig18323.1.1 vs. uniprot
Match: A0A8J1MPU5_XENLA (Diacylglycerol kinase n=8 Tax=Xenopus laevis TaxID=8355 RepID=A0A8J1MPU5_XENLA)

HSP 1 Score: 53.5 bits (127), Expect = 3.780e-6
Identity = 30/75 (40.00%), Postives = 45/75 (60.00%), Query Frame = 1
Query:   28 RSQGSTALHWAAYFGHKDACQMLIDAGADRASRNKAGATPLHSACECCRSSVVVYLVESCGADLTAADENGQTPI 252
            R+ G TALH AA+ GH+  CQ+L+DAGA    ++  G TP   A E   S +  YL ++C A L  ++E+ +T +
Sbjct:  923 RANGETALHKAAFHGHRWVCQILVDAGACVIKKDAKGKTPYDKAQEAGDSELASYL-DTCQAKLLLSNEDLETAV 996          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18323.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8H4PD85_9HYPO1.730e-1038.30Pfs domain-containing n=1 Tax=Fusarium albosuccine... [more]
C5LLE7_PERM58.500e-849.12Ankyrin repeat-containing protein YAR1, putative n... [more]
A0A6M4IXU9_9BACT1.710e-743.37Ankyrin repeat domain-containing protein n=1 Tax=G... [more]
A0A7J6ME09_PERCH1.800e-750.00Uncharacterized protein n=1 Tax=Perkinsus chesapea... [more]
A0A821MVX7_9NEOB5.760e-738.96(mimic poison frog) hypothetical protein n=1 Tax=R... [more]
UPI001D1565E51.200e-639.76ankyrin repeat domain-containing protein n=1 Tax=B... [more]
A0A6A6BEA9_9PEZI1.500e-640.24NACHT domain-containing protein n=1 Tax=Aplosporel... [more]
A0A8J1MPU9_XENLA3.780e-640.00Diacylglycerol kinase n=1 Tax=Xenopus laevis TaxID... [more]
A0A8J1MR13_XENLA3.780e-640.00Diacylglycerol kinase n=1 Tax=Xenopus laevis TaxID... [more]
A0A8J1MPU5_XENLA3.780e-640.00Diacylglycerol kinase n=8 Tax=Xenopus laevis TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18323contigP-wetherbeei_contig18323:172..456 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog42099.EPrPV00000018903
PFAMsAnk_2,Ank_4,Ank_5,DIL
Model size285
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.8e-09
EggNOG OGsCOG0666@1|root,KOG0502@2759|Eukaryota
Descriptionnerve growth factor signaling pathway
Cds size285
COG categoryJ
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186142.8276887-CDS-P-wetherbeei_contig18323:171..4561683186142.8276887-CDS-P-wetherbeei_contig18323:171..456Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig18323 172..456 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18323.1.1prot_P-wetherbeei_contig18323.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig18323 172..456 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig18323.1.1

>prot_P-wetherbeei_contig18323.1.1 ID=prot_P-wetherbeei_contig18323.1.1|Name=mRNA_P-wetherbeei_contig18323.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=95bp
GTPSQTQIFRSQGSTALHWAAYFGHKDACQMLIDAGADRASRNKAGATPL
HSACECCRSSVVVYLVESCGADLTAADENGQTPIDRVVAAGRRGR
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mRNA from alignment at P-wetherbeei_contig18323:172..456+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig18323.1.1 ID=mRNA_P-wetherbeei_contig18323.1.1|Name=mRNA_P-wetherbeei_contig18323.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=285bp|location=Sequence derived from alignment at P-wetherbeei_contig18323:172..456+ (Phaeothamnion wetherbeei SAG_119_79)
GGTACTCCTTCACAAACGCAAATCTTTCGGAGCCAGGGTTCGACTGCGCT CCACTGGGCCGCCTACTTTGGCCACAAGGATGCCTGTCAGATGCTGATTG ATGCGGGTGCTGACAGGGCGTCCCGAAACAAAGCTGGAGCGACTCCGCTA CATTCGGCATGCGAGTGTTGTCGCTCATCCGTCGTCGTGTACCTTGTGGA ATCCTGCGGCGCGGACCTCACCGCGGCCGACGAGAACGGACAGACCCCGA TCGACCGGGTCGTCGCGGCCGGCCGCCGCGGCCGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig18323:172..456+

>mRNA_P-wetherbeei_contig18323.1.1 ID=mRNA_P-wetherbeei_contig18323.1.1|Name=mRNA_P-wetherbeei_contig18323.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=285bp|location=Sequence derived from alignment at P-wetherbeei_contig18323:172..456+ (Phaeothamnion wetherbeei SAG_119_79)
GGTACTCCTTCACAAACGCAAATCTTTCGGAGCCAGGGTTCGACTGCGCT
CCACTGGGCCGCCTACTTTGGCCACAAGGATGCCTGTCAGATGCTGATTG
ATGCGGGTGCTGACAGGGCGTCCCGAAACAAAGCTGGAGCGACTCCGCTA
CATTCGGCATGCGAGTGTTGTCGCTCATCCGTCGTCGTGTACCTTGTGGA
ATCCTGCGGCGCGGACCTCACCGCGGCCGACGAGAACGGACAGACCCCGA
TCGACCGGGTCGTCGCGGCCGGCCGCCGCGGCCGG
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