mRNA_P-wetherbeei_contig18318.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig18318.1.1
Unique NamemRNA_P-wetherbeei_contig18318.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig18318.1.1 vs. uniprot
Match: A0A847ZTU0_9HYPH (Histidine kinase n=1 Tax=Phyllobacteriaceae bacterium TaxID=1871068 RepID=A0A847ZTU0_9HYPH)

HSP 1 Score: 598 bits (1541), Expect = 1.570e-206
Identity = 295/426 (69.25%), Postives = 363/426 (85.21%), Query Frame = 1
Query:   10 IKKAPFGTELFQSRFRIRMHNNEYVWVESVACVVRDPASGRAIKCVGLCRNVSDQMATLERMRSSERNLKRTQEAARLGSFSLRVETNVSRLSTEMASLIGMQEAIVHPNLATFMDMIEAGDKEKFAEGIELAKLGQHITDLEIAVRLKSGDIEFFQCTIEPERNAAGQVETLFGSCQCVTERKSLERKYLQAQKMEAVGQLTGGVAHDFNNLLMVVMGNLQLVEQLVKNDERATKRIRAALEAADKGSDLTKRMLAFSRLQTLQNKEISANELIMKMTDMLKHAVSATVDLKIIPHEGLWLIKADQTMLETAILNLAINARDAMKPKGGNLIIETANRHLDQAYCNEHEDVTIGDYVEIAVTDTGAGIAPENIEKVFQPFFTTKGPEAGSGLGLSMIYGFVKQSAGHIKIYSEVGHGTAVKIYLP 1287
            I+KAPFG ++FQ+R+R++    +YVW+ES+A V+R+   G+ +KC+GLCRN+ +QM  LER++ SERN KRTQ AARLGSFS R E+ VSRLS EMA+LIGM +A++HPNL TF+ MIE GD+EKF E +ELAK+G  I +LEIAV+ K+G+I  F+ T+EPER+  G VE +FG CQCV+ERK+LE+++ QAQKMEAVGQLTGG+AHDFNNLLMVVMGNLQLVEQLV+NDERA KRIRAA++A++KGS+LT+RMLAFSR QTLQNKE++ N+L+  + DMLK A++A V+LKIIP + LW +KAD+TMLETA+LNLAINARDAM+PKGG LIIET+NR LD  YC EHE+V  GDYVEI+VTDTG G+ PE +EKVFQPFFTTKGPE GSGLGLSMIYGFVKQS GHIK+YSEVGHGT VKIYLP
Sbjct:  186 IRKAPFGADVFQTRYRVKTAAGKYVWIESLAGVLRNTVDGQPLKCIGLCRNIDEQMVALERLKVSERNFKRTQAAARLGSFSYRNESGVSRLSQEMAALIGMADAMIHPNLKTFIGMIEPGDREKFCEALELAKIGTAIKNLEIAVKDKAGEISHFEVTLEPERDEDGHVEGIFGCCQCVSERKALEKRFHQAQKMEAVGQLTGGIAHDFNNLLMVVMGNLQLVEQLVRNDERALKRIRAAIDASEKGSELTRRMLAFSRQQTLQNKELTLNDLLFSIQDMLKQALTAIVELKIIPGDDLWAVKADKTMLETAVLNLAINARDAMQPKGGTLIIETSNRKLDAQYCAEHEEVIAGDYVEISVTDTGMGMTPEIMEKVFQPFFTTKGPEKGSGLGLSMIYGFVKQSNGHIKMYSEVGHGTTVKIYLP 611          
BLAST of mRNA_P-wetherbeei_contig18318.1.1 vs. uniprot
Match: UPI001983C771 (Response regulator n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=UPI001983C771)

HSP 1 Score: 571 bits (1472), Expect = 3.860e-196
Identity = 288/427 (67.45%), Postives = 349/427 (81.73%), Query Frame = 1
Query:   10 IKKAPFGTELFQSRFRIRMHNNEYVWVESVACVVRDPASGRAIKCVGLCRNVSDQMATLERMRSSERNLKRTQEAARLGSFSLRVETNVSRLSTEMASLIGMQEAIVHPNLATFMDMIEAGDKEKFAEGIELAKLGQHITDLEIAVR-LKSGDIEFFQCTIEPERNAAGQVETLFGSCQCVTERKSLERKYLQAQKMEAVGQLTGGVAHDFNNLLMVVMGNLQLVEQLVKNDERATKRIRAALEAADKGSDLTKRMLAFSRLQTLQNKEISANELIMKMTDMLKHAVSATVDLKIIPHEGLWLIKADQTMLETAILNLAINARDAMKPKGGNLIIETANRHLDQAYCNEHEDVTIGDYVEIAVTDTGAGIAPENIEKVFQPFFTTKGPEAGSGLGLSMIYGFVKQSAGHIKIYSEVGHGTAVKIYLP 1287
            I+ APFG+++FQ+R+R++  +  Y+W+ES+A ++R+P  G+ +KCVGL RN+ DQM  LE+M++SER L+R+Q+AARLGSF++ VET  +RLS EM +LIGM +AIV PNLA F  MIE  D ++F E +ELAKLG +    EIA + L +GD+ +F+  IE +RN+ G VET+FG+CQC TERK+LERKYLQAQKMEAVGQLTGGVAHDFNNLLMVV+GNLQLVEQLVKNDERA KRIRAA +AA++GS+LTKRMLAFSR QTLQNK I  N L+ +M D+L HAV A V L+I P   +W IKAD TMLETAILNL INARDAM PKGG L IETANR LD A+C + EDV  G+YVEIAVTDTG GIA EN+EKVFQPFFTTKGPEAGSGLGLSMIYGF KQS GHIKIYSEVGHGT ++++LP
Sbjct:  193 IRTAPFGSDMFQTRYRVKQKSGAYIWIESIAGIIRNPIDGKPVKCVGLSRNIGDQMVALEKMQASERILRRSQQAARLGSFTINVETGANRLSNEMIALIGMADAIVQPNLAMFEKMIEPQDIDRFREAVELAKLGHNSPGFEIAYKTLVAGDLNYFEVKIEADRNSQGDVETIFGTCQCATERKTLERKYLQAQKMEAVGQLTGGVAHDFNNLLMVVIGNLQLVEQLVKNDERALKRIRAAADAAERGSELTKRMLAFSRQQTLQNKNIEVNGLVGRMRDILNHAVGAAVSLEIHPGSEIWPIKADSTMLETAILNLCINARDAMLPKGGKLTIETANRVLDAAWCKDMEDVQPGEYVEIAVTDTGCGIASENLEKVFQPFFTTKGPEAGSGLGLSMIYGFAKQSGGHIKIYSEVGHGTTMRMFLP 619          
BLAST of mRNA_P-wetherbeei_contig18318.1.1 vs. uniprot
Match: UPI0018C82546 (ATP-binding protein n=1 Tax=Aestuariivirga litoralis TaxID=2650924 RepID=UPI0018C82546)

HSP 1 Score: 568 bits (1463), Expect = 9.420e-195
Identity = 279/426 (65.49%), Postives = 351/426 (82.39%), Query Frame = 1
Query:   10 IKKAPFGTELFQSRFRIRMHNNEYVWVESVACVVRDPASGRAIKCVGLCRNVSDQMATLERMRSSERNLKRTQEAARLGSFSLRVETNVSRLSTEMASLIGMQEAIVHPNLATFMDMIEAGDKEKFAEGIELAKLGQHITDLEIAVRLKSGDIEFFQCTIEPERNAAGQVETLFGSCQCVTERKSLERKYLQAQKMEAVGQLTGGVAHDFNNLLMVVMGNLQLVEQLVKNDERATKRIRAALEAADKGSDLTKRMLAFSRLQTLQNKEISANELIMKMTDMLKHAVSATVDLKIIPHEGLWLIKADQTMLETAILNLAINARDAMKPKGGNLIIETANRHLDQAYCNEHEDVTIGDYVEIAVTDTGAGIAPENIEKVFQPFFTTKGPEAGSGLGLSMIYGFVKQSAGHIKIYSEVGHGTAVKIYLP 1287
            I  APFGT++F +R+R++  + +Y W+E +A VVRDPASGR  KCVGLCRN+ ++M TL+R+++SE  LKR+Q  + +GSF LR+E+ VSRL+ E+A++IG+ +A++HPNL TF+ MIE GD++KF +G+EL K+G  + +LEIAV+   G IE+F  ++EPE N  G++E +FG+CQ VTERK LE K+ QAQKMEAVGQLTGG+AHDFNNLLMVVMGNLQLVE LVK+DE+ATKRIRAALEAADKGSDLT+RMLAFSR QTLQN+E+  NEL+  M DMLK A++A+++L++IP   LW I+AD TMLET +LNL INARDAM  KGG LIIE  NR LD+AY  +H D+  GDYVEI+VTDTG GI PEN+EKVFQPFFTTK PEAGSGLGLSMIYGFVKQS GH++IYSEVG GT+VK+YLP
Sbjct:  186 IAHAPFGTDVFHTRYRVKTRSGKYAWIECLAAVVRDPASGRPKKCVGLCRNIDNEMLTLDRLKNSELMLKRSQSVSHIGSFKLRLESGVSRLTAELAAMIGLADAMIHPNLDTFIKMIEPGDRQKFMDGLELTKIGNIVKNLEIAVKTPDGRIEWFNVSMEPETNDNGEIENIFGACQQVTERKMLEDKFHQAQKMEAVGQLTGGIAHDFNNLLMVVMGNLQLVENLVKSDEKATKRIRAALEAADKGSDLTRRMLAFSRQQTLQNREVRVNELVNAMQDMLKQALTASIELEVIPASHLWPIQADSTMLETTLLNLTINARDAMASKGGRLIIEMRNRTLDEAYAEKHTDMVAGDYVEISVTDTGTGIEPENLEKVFQPFFTTKPPEAGSGLGLSMIYGFVKQSGGHVQIYSEVGVGTSVKLYLP 611          
BLAST of mRNA_P-wetherbeei_contig18318.1.1 vs. uniprot
Match: A0A3N5HHX6_9HYPH (Histidine kinase (Fragment) n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A3N5HHX6_9HYPH)

HSP 1 Score: 562 bits (1448), Expect = 5.420e-194
Identity = 288/427 (67.45%), Postives = 346/427 (81.03%), Query Frame = 1
Query:   10 IKKAPFGTELFQSRFRIRMHNNEYVWVESVACVVRDPASGRAIKCVGLCRNVSDQMATLERMRSSERNLKRTQEAARLGSFSLRVETNVSRLSTEMASLIGMQEAIVHPNLATFMDMIEAGDKEKFAEGIELAKLGQHITDLEIAVR-LKSGDIEFFQCTIEPERNAAGQVETLFGSCQCVTERKSLERKYLQAQKMEAVGQLTGGVAHDFNNLLMVVMGNLQLVEQLVKNDERATKRIRAALEAADKGSDLTKRMLAFSRLQTLQNKEISANELIMKMTDMLKHAVSATVDLKIIPHEGLWLIKADQTMLETAILNLAINARDAMKPKGGNLIIETANRHLDQAYCNEHEDVTIGDYVEIAVTDTGAGIAPENIEKVFQPFFTTKGPEAGSGLGLSMIYGFVKQSAGHIKIYSEVGHGTAVKIYLP 1287
            IK +PFG+++FQ+R+R++    +YVWVES+A V+R+P  G  +KCVGL RN+SDQMA LE+M++SER LKR+Q AARLGSF++ VET++SRLS EM +LIGM +AIV PNLA F  MIE  D+EKF + I  AK G+     EIA + L  G++ +F+  IE +RN+ GQ+E +FG+CQ +TERK+LERK+LQAQKMEAVGQLTGGVAHDFNNLLMVV+GNLQLVEQLVKNDERA KRIRAA EAA++GS+LTKRMLAFSR QTLQ +E+  N L+ +M  +L HAV ATVDL II    +W ++ D TMLETA+LNL INARDAMKPKGG + IET NR LD A C + EDV  GDYVEIAVTDTG GIA ENIEKVFQPFFTTKGPEAGSGLGLSMIYGF KQS GHIKIYSEVGHGT +++YLP
Sbjct:  116 IKMSPFGSDMFQTRYRVKNRAGQYVWVESIAGVIRNPIDGMPMKCVGLSRNISDQMAALEKMQASERVLKRSQRAARLGSFTVNVETSISRLSAEMIALIGMADAIVQPNLAVFEKMIEPSDREKFRDAIARAKEGEDSPAFEIAYKTLVEGELNYFEVKIEADRNSLGQIEQVFGTCQSITERKTLERKFLQAQKMEAVGQLTGGVAHDFNNLLMVVLGNLQLVEQLVKNDERALKRIRAAHEAAERGSELTKRMLAFSRQQTLQKRELDVNALLDRMRGILGHAVGATVDLGIITSPSIWPVRTDATMLETAVLNLCINARDAMKPKGGRITIETFNRTLDAASCADMEDVPPGDYVEIAVTDTGCGIAAENIEKVFQPFFTTKGPEAGSGLGLSMIYGFAKQSGGHIKIYSEVGHGTTMRLYLP 542          
BLAST of mRNA_P-wetherbeei_contig18318.1.1 vs. uniprot
Match: A0A7Y2FV16_9HYPH (Histidine kinase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7Y2FV16_9HYPH)

HSP 1 Score: 439 bits (1129), Expect = 3.410e-143
Identity = 234/429 (54.55%), Postives = 308/429 (71.79%), Query Frame = 1
Query:   10 IKKAPFGTELFQSRFRIRMHNNEYVWVESVACVVRDPASGRAIKCVGLCRNVSDQMATLERMRSSERNLKRTQEAARLGSFSLRVETNVSRLSTEMASLIGMQEAIVHPNLATFMDMIEAGDKEKFAEGIELAKLGQHITDLEIAVRLKSGDIEFFQCTIEPERNAAGQVETLFGSCQCVTERKSLERKYLQAQKMEAVGQLTGGVAHDFNNLLMVVMGNLQLVEQLVKN-DERATKRIRAALEAADKGSDLTKRMLAFSRLQTLQNKEISANELIMKMTDMLKHAVSATVDLKIIPHEGLWLIKADQTMLETAILNLAINARDAMKPKGGNLIIETANRHLDQAYCNEHEDVTIGDYVEIAVTDTGAGIAPENIEKVFQPFFTTKGPEAGSGLGLSMIYGFVKQSAGHIKIYSEVGHGTAVKIYLPCF 1293
            IK+ P G + +  RFR R  N+EY+W+E ++ VVRDP +G  +K +GL RN+ ++M  L R+  S+RNL R+QE AR+GS+ + V T     S +M ++ G   A   P     ++M+    ++++ E IELAKLG  I   +  +  KSGD++  Q  I+ ER  AG VETL G CQ +TE+  LERK+LQAQKME+VG+LTGG+AHDFNNLLMV++GNLQL+EQ+V + DE+A KRI A +EAA+KGS+LTKRMLAFSR QTL+++E+  ++LI  M +ML  A+   ++L++I  EGLW +  D+T LETAILNLAINARDAM   GG+L IETAN  LD  YC ++ED+  G YV I+VTDTG G+  E I+KV QPFFTTK PEAGSGLGLSMIYGFV+QS GH+KI SE G GT +KIYLP F
Sbjct:  199 IKRDP-GAKFWLDRFRYRNANDEYLWLEQISAVVRDPLTGDHVKVIGLLRNIDERMEELNRLEQSQRNLARSQEIARVGSWIIDVSTGAIEWSDQMYAIFGFNRA-ADPTFDPILEMMNESHRDRWVENIELAKLGTKIKPFDCDITRKSGDVQRIQIHIDAERTEAGSVETLHGICQDITEQILLERKFLQAQKMESVGRLTGGIAHDFNNLLMVMVGNLQLLEQMVDDTDEKALKRIHAVIEAANKGSELTKRMLAFSRQQTLEDEELQVDDLIGSMKEMLTRAIGGAIELEVIAGEGLWPVATDRTQLETAILNLAINARDAMVD-GGSLTIETANSLLDTTYCRQYEDLAPGAYVMISVTDTGQGMPAEIIDKVVQPFFTTKPPEAGSGLGLSMIYGFVQQSGGHLKITSEEGKGTTIKIYLPKF 624          
BLAST of mRNA_P-wetherbeei_contig18318.1.1 vs. uniprot
Match: A0A3B0RGE1_9ZZZZ (Uncharacterized protein n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0RGE1_9ZZZZ)

HSP 1 Score: 404 bits (1038), Expect = 1.160e-130
Identity = 211/431 (48.96%), Postives = 297/431 (68.91%), Query Frame = 1
Query:    4 AMIKKAPFGTELFQSRFRIRMHNNEYVWVESVACVVRDPASGRAIKCVGLCRNVSDQMATLERMRSSERNLKRTQEAARLGSFSLRVETNVSRLSTEMASLIGMQEAIVHPNLATFM-DMIEAGDKEKFAEGIELAKLGQHITDLEIAVRLKSGDIEFFQCTIEPERNAAGQVETLFGSCQCVTERKSLERKYLQAQKMEAVGQLTGGVAHDFNNLLMVVMGNLQLVEQLVKNDERATKRIRAALEAADKGSDLTKRMLAFSRLQTLQNKEISANELIMKMTDMLKHAVSATVDLKIIPHEGLWLIKADQTMLETAILNLAINARDAMKPKGGNLIIETANRHLDQAYCNEHEDVTIGDYVEIAVTDTGAGIAPENIEKVFQPFFTTKGPEAGSGLGLSMIYGFVKQSAGHIKIYSEVGHGTAVKIYLPCF 1293
            AMI       +  Q+ +R++  +  Y W+E +A  ++DP +    K +GLCR++S +M    +  +SE+NL R+Q  A++GS+ + ++      S  M +L+G ++         F+  ++E G+KEK+ E +E AKLGQ I+ LE       G+       I+ E +A GQ   L G CQ +T++  LERK+LQAQKME+VGQLTGG+AHDFNNLLMVV+GNLQL+E+L + DE+AT R+  A++A +KGS+LTKR+LAFSR QTL++     NELI   +DML  A+++ ++LKI P + +W +KAD+T LETAILNL+INARDAMK  GG LI+ET N+ L+ +Y  +H+D+  GDYV ++V+DTG G+  + I+KV QPFFTTK P +GSGLGLSMIYGFVKQS GH+ IYSEVG GT ++IYLP F
Sbjct:  194 AMITNVDSAQQFLQTSYRVKHRDGHYAWLELIARAIKDPITKDVTKLIGLCRDISQEMDLRHQTETSEQNLARSQALAKIGSWVMDLDDQTVDWSDHMFALVGAEKGGDSGLQFDFLTSLMEPGEKEKWLESLEFAKLGQSISGLECEFNHPDGEKHRISVHIDIEYDAEGQPSKLHGICQDITDQTLLERKFLQAQKMESVGQLTGGIAHDFNNLLMVVLGNLQLIEKLTEGDEKATSRLTTAIDAVNKGSELTKRLLAFSRQQTLEDDIFEVNELIENTSDMLTRAITSNIELKIKPGKEIWTVKADKTQLETAILNLSINARDAMKD-GGTLIVETENKTLETSYTKQHDDLIPGDYVVVSVSDTGEGMPADIIDKVLQPFFTTKPPGSGSGLGLSMIYGFVKQSKGHLSIYSEVGTGTTIRIYLPRF 623          
BLAST of mRNA_P-wetherbeei_contig18318.1.1 vs. uniprot
Match: A0A7Y2BSD5_9HYPH (Histidine kinase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7Y2BSD5_9HYPH)

HSP 1 Score: 303 bits (777), Expect = 7.170e-93
Identity = 182/405 (44.94%), Postives = 251/405 (61.98%), Query Frame = 1
Query:  121 ASGRAIKCVGLCRNVSDQMATLERMRSSERNLKRTQEAARLGSFSLRVETNVSRLSTEMASLIGMQEAIVHPNLATFMDMIEAGDKEKFAEGIELAKLGQHITDLEIAVRLKSG-----DIEFFQC---------TIEPERNAAGQVETLFGSCQCVTERKSLERKYLQAQKMEAVGQLTGGVAHDFNNLLMVVMGNLQLVEQLVKNDERATKRIRAALEAADKGSDLTKRMLAFSRLQTLQNKEISANELIMKMTDMLKHAVSATVDLKIIPHEGLWLIKADQTMLETAILNLAINARDAMKPKGGN--LIIETANRHLDQAYCNEHEDVTIGDYVEIAVTDTGAGIAPENIEKVFQPFFTTKGPEAGSGLGLSMIYGFVKQSAGHIKIYSEVGHGTAVKIYLP 1287
            A GR  + V +  ++S+Q  T   +R SE+  + + EAA  G   L V+  +S ++  M  L+G++E  +     +FMD++   D  K             +TD+   +R + G     ++ F            +I   R++ G+VE        +T R+  E    QAQKMEAVGQLTGG+AHDFNNLL VV+GNLQL+E  ++ +++A KR R A++AA KGS+LTK++LAF+R Q+L  +E+  N LI +M  +L+ +V   V LK+   +G  +IKAD T LET+ILNLAINARDAMK  GG   L IET+  HLD  Y  EHE+V  GDYV IAV+DTGAGI    + KVFQPFFTTK    G+GLGLSM++GF+KQS GH+K+YSE G GT+ K+YLP
Sbjct:  161 AQGRVERSVAVLSDMSNQARTQTALRQSEQRFRNSFEAAAHGMAILSVDGRISAVNNSMIELLGVKELDILSK--SFMDIVHVDDVSK-------------VTDVVSKIRSEGGGGGHAELRFLGAEDKHVHALTSISAVRDSNGKVEQFILQMVDITSRQKAEEHLRQAQKMEAVGQLTGGIAHDFNNLLTVVIGNLQLIEGALEGNDKALKRAREAIDAATKGSELTKQLLAFARRQSLAPQELKVNHLIHEMEGILQRSVGEAVKLKVDLMKGDPIIKADPTQLETSILNLAINARDAMKDSGGGGRLTIETSRLHLDADYAKEHEEVEPGDYVMIAVSDTGAGIPKHLLHKVFQPFFTTKEVGKGTGLGLSMVFGFIKQSGGHMKVYSEEGCGTSFKMYLP 550          
BLAST of mRNA_P-wetherbeei_contig18318.1.1 vs. uniprot
Match: A0A7V2WMP3_9HYPH (Histidine kinase (Fragment) n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7V2WMP3_9HYPH)

HSP 1 Score: 294 bits (752), Expect = 1.460e-90
Identity = 170/399 (42.61%), Postives = 249/399 (62.41%), Query Frame = 1
Query:   97 VACVVRDPASGRAIKCVGLCRNVSDQMATLERMRSSERNLKRTQEAARLGSFSLRVETNVSRLSTEMASLIGMQEAIVHPNLATFMDMIEAGDKEKFAEGIELAKLGQHITDLEIAVRLKSGDIEFFQ--CTIEPERNAAGQVETLFGSCQCVTERKSLERKYLQAQKMEAVGQLTGGVAHDFNNLLMVVMGNLQLVEQLVKNDERATKRIRAALEAADKGSDLTKRMLAFSRLQTLQNKEISANELIMKMTDMLKHAVSATVDLKIIPHEGLWLIKADQTMLETAILNLAINARDAMKPKGGNLIIETANRHLDQAYCNEHEDVTIGDYVEIAVTDTGAGIAPENIEKVFQPFFTTKGPEAGSGLGLSMIYGFVKQSAGHIKIYSEVGHGTAVKIYLP 1287
            ++ V    A+GR  K + +  ++S +      +R SE+  + + E+A  G   L  +  V+  +  +  L+   E  +  +     ++I   D++K          GQH   +   +R    D +      +I   R+  G++E L      +T R   E    +AQKMEA+GQLTGG+AHDFNNLL VV+GNLQLVE+ +  +E+A+KR R A++AA KGS+LT+++LAF+R Q L  +++  NELI  M  ML  ++  +V+LK+   +G  +IKAD T LE++ILNLAINARDAM  K G L IET+  +LD+AY +EHE+V  G Y+ IAV+DTG+GI P  +EK+FQPFFTTK    G+GLGLSM++GF+KQS GH+++YSE GHGT+ K+YLP
Sbjct:  165 MSSVAHKNAAGRVEKSIVVFADMSQRAEAQAALRQSEQRFRESFESAAHGMAILTADGRVAAANVALTELLNQSE--LELSRKRMAELICDADQDKLQAMFSRVMSGQH-AGVNAELRFNGTDDKTIHGLTSISGVRDRFGKIEQLIVQVVDLTTRHRAEEHLRKAQKMEAIGQLTGGIAHDFNNLLTVVIGNLQLVEKALDGNEKASKRAREAIDAATKGSELTRQLLAFARRQPLAPQDVEVNELIDNMGSMLARSIGGSVELKVDLMDGAPVIKADPTQLESSILNLAINARDAMD-KNGRLTIETSAAYLDEAYVSEHEEVVPGHYILIAVSDTGSGIPPHVLEKIFQPFFTTKEVGKGTGLGLSMVFGFIKQSGGHMRVYSEEGHGTSFKLYLP 559          
BLAST of mRNA_P-wetherbeei_contig18318.1.1 vs. uniprot
Match: A0A4P6FLN8_9SPHN (Histidine kinase n=2 Tax=Sphingomonadales TaxID=204457 RepID=A0A4P6FLN8_9SPHN)

HSP 1 Score: 291 bits (746), Expect = 1.180e-85
Identity = 178/436 (40.83%), Postives = 257/436 (58.94%), Query Frame = 1
Query:   34 ELFQSRFRIRMHNNEYVWVESVACVVRDPASGRAIKCVGLCRNVSDQMATLERMRS-----SERNLKRTQEAARLGSFSLRV------ETNVSRLSTEMASLIGMQEAIVHPNLATFMDMIEAGDKEKFAEGIELAKLGQHITDL--EIAVRLKSGDIEFFQCTIEPERNAAGQV-ETLFGSCQCVTERKSLERKYLQAQKMEAVGQLTGGVAHDFNNLLMVVMGNLQLVEQLVKN----DERATKRIRAALEAADKGSDLTKRMLAFSRLQTLQNKEISANELIMKMTDMLKHAVSATVDLKIIPHEGLWLIKADQTMLETAILNLAINARDAMKPKGGNLIIETANRHLDQAYCNEHEDVTIGDYVEIAVTDTGAGIAPENIEKVFQPFFTTKGPEAGSGLGLSMIYGFVKQSAGHIKIYSEVGHGTAVKIYLP 1287
            E +   +R+R  + EY WV   A  VRD A+GR  +  G C ++ D     +++R+      +R  +RT +  R+   S  +      +  +S ++    +L+G  E  +     +F+D++   D+E  A   E  +L   +T L  E   R + G   +   T  P+      V   +    Q   E    +    Q+QKME+VGQLTGG+AHDFNNLL VV GN+ + ++ +      D RA + +  A++ A++ + LT+R+LAFSR Q L  K +  ++L++ M+D+L  A+  TV L+I+   GLW ++AD   LE+A+LNLA+NARDAM P+GG L IETAN  LD+ Y  +H +V  G YV IAVTDTG G+  E IE+VF+PFFTTK    G+GLGLSM+YGFVKQS GH+KIYSE+GHGT VKIYLP
Sbjct:  342 EPYHIEYRLRHRSGEYRWVLGRAQPVRD-AAGRITRWYGTCTDIHDLRVARDQLRAMTTTLEQRVAERTADRDRIWRLSTDLMLVAGFDATISAVNPAWTTLLGWSEEELIGR--SFLDLVHPDDRE--ATLAEAGRLSDGLTTLRFENRYRRRDGSYAWLSWTAVPDTQFIHAVARDIDAEKQAAEELARAQEALRQSQKMESVGQLTGGIAHDFNNLLTVVTGNIDMAKRALDAAGAPDPRARRALENAMKGAERAAALTQRLLAFSRRQPLAPKPLDVDKLVVGMSDLLNRALGETVQLEIVTSPGLWRVEADPNQLESAVLNLAVNARDAM-PEGGQLTIETANARLDEEYSAQHAEVAPGQYVVIAVTDTGEGMGRETIERVFEPFFTTKEVGKGTGLGLSMVYGFVKQSGGHVKIYSELGHGTTVKIYLP 771          
BLAST of mRNA_P-wetherbeei_contig18318.1.1 vs. uniprot
Match: A0A4Y8ZQW8_9SPHN (Histidine kinase n=2 Tax=Sphingomonas parva TaxID=2555898 RepID=A0A4Y8ZQW8_9SPHN)

HSP 1 Score: 289 bits (740), Expect = 9.190e-85
Identity = 180/438 (41.10%), Postives = 257/438 (58.68%), Query Frame = 1
Query:   34 ELFQSRFRIRMHNNEYVWVESVACVVRDPASGRAIKCVGLCRNVSDQMATLERMRS-----SERNLKRTQEAARLGSFSL------RVETNVSRLSTEMASLIGMQEA--IVHPNLATFMDMIEAGDKEKFAEGIELAKLGQHITDL--EIAVRLKSGDIEFFQCTIEPERNAAGQVETLFGSCQCVTERKSLERKYL-QAQKMEAVGQLTGGVAHDFNNLLMVVMGNLQLVEQLVK----NDERATKRIRAALEAADKGSDLTKRMLAFSRLQTLQNKEISANELIMKMTDMLKHAVSATVDLKIIPHEGLWLIKADQTMLETAILNLAINARDAMKPKGGNLIIETANRHLDQAYCNEHEDVTIGDYVEIAVTDTGAGIAPENIEKVFQPFFTTKGPEAGSGLGLSMIYGFVKQSAGHIKIYSEVGHGTAVKIYLP 1287
            E +   +R+R H+  Y WV   A  VRD  SG  ++  G C ++ D     + +R+      ER  +RT +  R+   S       R +  +S ++    +L+G  EA  I  P    F+D++   D+   A   E  +L   +T L  E   R K G   +   T  P+ +    V     + +   E  +  ++ L Q+QKME+VGQLTGG+AHDFNNLL VV GN+ +  + ++    +D RA + +  A++ A++ + LT+R+LAFSR Q L  K +  + L++ M+D+L  A+  TV L+I+   GLW ++AD   LE+A+LNLA+NARDAM P GG L IET N  LD+ Y  +H +V  G YV IAVTDTG G++ E I +VF+PFFTTK    G+GLGLSM+YGFVKQS GH+KIYSE+GHGT VKIYLP
Sbjct:  349 ETYHIEYRLRHHSGVYRWVLGRAQPVRDQ-SGTILRWYGTCTDIHDLREAQDALRAMAATLEERVTERTADRDRMWRLSTDLMLVARFDATISAVNPAWTTLLGWSEAELIGRP----FLDLVHPDDRA--ATEAEAGRLSDGLTTLRFENRYRRKDGSYAWLSWTAVPDDDFIHAVARDIDAEKLAAEELARAQEALRQSQKMESVGQLTGGIAHDFNNLLTVVTGNIDMARRALEAAGSSDPRARRALDNAMKGAERAAALTQRLLAFSRRQPLAPKPLDVDRLVVGMSDLLNRALGETVRLEIVTSPGLWRVEADPNQLESAVLNLAVNARDAM-PGGGQLTIETTNTRLDEEYSAQHAEVAPGQYVVIAVTDTGEGMSKETIARVFEPFFTTKEVGKGTGLGLSMVYGFVKQSGGHVKIYSEIGHGTTVKIYLP 778          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18318.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A847ZTU0_9HYPH1.570e-20669.25Histidine kinase n=1 Tax=Phyllobacteriaceae bacter... [more]
UPI001983C7713.860e-19667.45Response regulator n=1 Tax=Hyphomicrobiales bacter... [more]
UPI0018C825469.420e-19565.49ATP-binding protein n=1 Tax=Aestuariivirga litoral... [more]
A0A3N5HHX6_9HYPH5.420e-19467.45Histidine kinase (Fragment) n=1 Tax=Hyphomicrobial... [more]
A0A7Y2FV16_9HYPH3.410e-14354.55Histidine kinase n=1 Tax=Hyphomicrobiales bacteriu... [more]
A0A3B0RGE1_9ZZZZ1.160e-13048.96Uncharacterized protein n=1 Tax=hydrothermal vent ... [more]
A0A7Y2BSD5_9HYPH7.170e-9344.94Histidine kinase n=1 Tax=Hyphomicrobiales bacteriu... [more]
A0A7V2WMP3_9HYPH1.460e-9042.61Histidine kinase (Fragment) n=1 Tax=Hyphomicrobial... [more]
A0A4P6FLN8_9SPHN1.180e-8540.83Histidine kinase n=2 Tax=Sphingomonadales TaxID=20... [more]
A0A4Y8ZQW8_9SPHN9.190e-8541.10Histidine kinase n=2 Tax=Sphingomonas parva TaxID=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18318contigP-wetherbeei_contig18318:69..1361 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog754477.Q7C_2557
PFAMsGAF_2,HAMP,HATPase_c,HisKA,PAS_3,Response_reg,dCache_2
Model size1293
Max annot lvl72273|Thiotrichales
Hectar predicted targeting categoryother localisation
Exons1
Evalue6.74e-80
EggNOG OGsCOG2202@1|root,COG2203@1|root,COG4191@1|root,COG2202@2|Bacteria,COG2203@2|Bacteria,COG4191@2|Bacteria,1RCM9@1224|Proteobacteria,1RP53@1236|Gammaproteobacteria,461KU@72273|Thiotrichales
DescriptionHistidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Cds size1293
COG categoryT
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186142.6587472-CDS-P-wetherbeei_contig18318:68..13611683186142.6587472-CDS-P-wetherbeei_contig18318:68..1361Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig18318 69..1361 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18318.1.1prot_P-wetherbeei_contig18318.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig18318 69..1361 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig18318.1.1

>prot_P-wetherbeei_contig18318.1.1 ID=prot_P-wetherbeei_contig18318.1.1|Name=mRNA_P-wetherbeei_contig18318.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=431bp
MAMIKKAPFGTELFQSRFRIRMHNNEYVWVESVACVVRDPASGRAIKCVG
LCRNVSDQMATLERMRSSERNLKRTQEAARLGSFSLRVETNVSRLSTEMA
SLIGMQEAIVHPNLATFMDMIEAGDKEKFAEGIELAKLGQHITDLEIAVR
LKSGDIEFFQCTIEPERNAAGQVETLFGSCQCVTERKSLERKYLQAQKME
AVGQLTGGVAHDFNNLLMVVMGNLQLVEQLVKNDERATKRIRAALEAADK
GSDLTKRMLAFSRLQTLQNKEISANELIMKMTDMLKHAVSATVDLKIIPH
EGLWLIKADQTMLETAILNLAINARDAMKPKGGNLIIETANRHLDQAYCN
EHEDVTIGDYVEIAVTDTGAGIAPENIEKVFQPFFTTKGPEAGSGLGLSM
IYGFVKQSAGHIKIYSEVGHGTAVKIYLPCF
back to top

mRNA from alignment at P-wetherbeei_contig18318:69..1361-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig18318.1.1 ID=mRNA_P-wetherbeei_contig18318.1.1|Name=mRNA_P-wetherbeei_contig18318.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1293bp|location=Sequence derived from alignment at P-wetherbeei_contig18318:69..1361- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGATGATCAAGAAGGCGCCCTTCGGCACCGAGCTTTTTCAGTCGCG CTTCCGCATTCGCATGCACAACAACGAGTATGTCTGGGTTGAATCGGTGG CCTGCGTGGTCCGCGACCCGGCAAGCGGGCGGGCGATAAAATGCGTTGGC CTCTGCCGCAACGTGAGCGACCAGATGGCGACCCTGGAACGCATGCGCAG CTCCGAACGCAACCTCAAGCGCACCCAGGAAGCCGCAAGGCTTGGCAGCT TCTCCCTGCGGGTGGAAACCAACGTGTCGCGCCTTTCAACCGAAATGGCG AGCCTCATCGGCATGCAGGAAGCCATCGTCCATCCCAATCTCGCAACCTT CATGGATATGATCGAGGCTGGCGATAAGGAAAAATTCGCCGAAGGCATCG AGCTCGCCAAGCTTGGCCAGCACATAACCGATCTCGAAATTGCCGTGCGG CTCAAGTCCGGCGACATTGAATTCTTCCAATGCACCATTGAACCGGAGCG CAATGCGGCAGGCCAGGTCGAAACTCTCTTCGGCTCCTGCCAATGCGTGA CCGAGCGCAAGTCGCTTGAGCGAAAATACCTGCAGGCCCAGAAGATGGAA GCCGTAGGCCAGCTCACCGGCGGCGTAGCCCATGACTTCAACAATCTCCT GATGGTCGTGATGGGAAATCTCCAGCTTGTCGAGCAACTCGTTAAAAACG ATGAGCGCGCCACCAAACGCATTCGCGCTGCCCTCGAAGCTGCCGACAAG GGCTCCGACCTCACCAAGCGCATGCTGGCCTTCTCACGCCTGCAAACCCT GCAGAACAAGGAAATCTCGGCAAACGAACTCATCATGAAGATGACGGACA TGCTGAAACACGCGGTGAGCGCCACCGTCGATCTCAAGATCATTCCGCAC GAAGGCCTCTGGCTCATCAAGGCCGATCAAACCATGCTCGAAACGGCCAT CCTCAATCTTGCCATCAATGCCCGCGACGCCATGAAGCCAAAGGGCGGCA ACCTCATTATCGAAACCGCAAACCGCCATCTGGATCAAGCCTATTGCAAC GAGCATGAGGATGTCACCATTGGCGATTACGTGGAAATCGCCGTCACCGA TACGGGTGCTGGCATCGCCCCGGAAAACATTGAAAAGGTTTTCCAGCCCT TCTTCACGACGAAGGGCCCCGAAGCCGGCTCAGGCCTTGGCCTTTCCATG ATCTACGGTTTCGTGAAGCAGTCCGCTGGCCACATCAAAATCTATTCGGA AGTGGGCCACGGCACAGCGGTGAAAATCTACCTCCCCTGCTTC
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig18318:69..1361-

>mRNA_P-wetherbeei_contig18318.1.1 ID=mRNA_P-wetherbeei_contig18318.1.1|Name=mRNA_P-wetherbeei_contig18318.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1293bp|location=Sequence derived from alignment at P-wetherbeei_contig18318:69..1361- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGATGATCAAGAAGGCGCCCTTCGGCACCGAGCTTTTTCAGTCGCG
CTTCCGCATTCGCATGCACAACAACGAGTATGTCTGGGTTGAATCGGTGG
CCTGCGTGGTCCGCGACCCGGCAAGCGGGCGGGCGATAAAATGCGTTGGC
CTCTGCCGCAACGTGAGCGACCAGATGGCGACCCTGGAACGCATGCGCAG
CTCCGAACGCAACCTCAAGCGCACCCAGGAAGCCGCAAGGCTTGGCAGCT
TCTCCCTGCGGGTGGAAACCAACGTGTCGCGCCTTTCAACCGAAATGGCG
AGCCTCATCGGCATGCAGGAAGCCATCGTCCATCCCAATCTCGCAACCTT
CATGGATATGATCGAGGCTGGCGATAAGGAAAAATTCGCCGAAGGCATCG
AGCTCGCCAAGCTTGGCCAGCACATAACCGATCTCGAAATTGCCGTGCGG
CTCAAGTCCGGCGACATTGAATTCTTCCAATGCACCATTGAACCGGAGCG
CAATGCGGCAGGCCAGGTCGAAACTCTCTTCGGCTCCTGCCAATGCGTGA
CCGAGCGCAAGTCGCTTGAGCGAAAATACCTGCAGGCCCAGAAGATGGAA
GCCGTAGGCCAGCTCACCGGCGGCGTAGCCCATGACTTCAACAATCTCCT
GATGGTCGTGATGGGAAATCTCCAGCTTGTCGAGCAACTCGTTAAAAACG
ATGAGCGCGCCACCAAACGCATTCGCGCTGCCCTCGAAGCTGCCGACAAG
GGCTCCGACCTCACCAAGCGCATGCTGGCCTTCTCACGCCTGCAAACCCT
GCAGAACAAGGAAATCTCGGCAAACGAACTCATCATGAAGATGACGGACA
TGCTGAAACACGCGGTGAGCGCCACCGTCGATCTCAAGATCATTCCGCAC
GAAGGCCTCTGGCTCATCAAGGCCGATCAAACCATGCTCGAAACGGCCAT
CCTCAATCTTGCCATCAATGCCCGCGACGCCATGAAGCCAAAGGGCGGCA
ACCTCATTATCGAAACCGCAAACCGCCATCTGGATCAAGCCTATTGCAAC
GAGCATGAGGATGTCACCATTGGCGATTACGTGGAAATCGCCGTCACCGA
TACGGGTGCTGGCATCGCCCCGGAAAACATTGAAAAGGTTTTCCAGCCCT
TCTTCACGACGAAGGGCCCCGAAGCCGGCTCAGGCCTTGGCCTTTCCATG
ATCTACGGTTTCGTGAAGCAGTCCGCTGGCCACATCAAAATCTATTCGGA
AGTGGGCCACGGCACAGCGGTGAAAATCTACCTCCCCTGCTTC
back to top