mRNA_P-wetherbeei_contig18315.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig18315.1.1
Unique NamemRNA_P-wetherbeei_contig18315.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig18315.1.1 vs. uniprot
Match: A0A7C2LQX2_9HYPH (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C2LQX2_9HYPH)

HSP 1 Score: 457 bits (1176), Expect = 2.400e-159
Identity = 232/324 (71.60%), Postives = 269/324 (83.02%), Query Frame = 1
Query:   37 MDRRYFIAGTAATTAALSSGTGIAQDAYPSRTVTLINPFPPGGAADVVGRPLAAVLEPILKQPVIIDTKTGAAGAVGAQVAASAKPDGYTLLVHIVSLSGFAEVDRIYGRPVKFTNDDFIPIARLIADPMVLLVNDQVPYKTLKELVEAAKAKPDSLLFSSSGLHGALHLPTALFLKAADIKMKHLPTNGGGPALTALIGNNSQVLASSFAAANAQIKAGKARALASFGAKRDPLHPEVPTMKELGYDIEFYLWVGLFAPKGTPAPIIDKLRGEVKKAVVTEKFESAIKNLGQAVAYQDAPEFKKFWDADAKRVVAAVQAIGKI 1008
            MDRR F+AG+AA  A L++G   AQDAYPSR +TL+NPFPPGGAADVVGRP AA LEP++KQPV+I+TK GAAG VGAQ  ASAKPDGYTLL+HIVS+SGFAEVD+++GR  KFT  DF+PIAR    PMV++VNDQ PYKTLKELVE AK +P+ ++FSSSGL+GALHLPTAL +KAA I+MKHLPTNGGGPALTAL+GNNSQVL SS AAA+AQIKAGKARALA F AKR     +VPT+KELGYD+EF LWVGLFAPKGTP  +I KLR E KKAV TE+F  AI N+G  VAY D P+F KFWD DAKRV  AV++IGK+
Sbjct:    1 MDRRKFVAGSAAAAAVLAAGAPRAQDAYPSRAITLVNPFPPGGAADVVGRPFAAALEPLVKQPVVIETKAGAAGQVGAQYVASAKPDGYTLLIHIVSISGFAEVDKLFGRQPKFTRADFVPIARFTEGPMVVIVNDQQPYKTLKELVEDAKKRPNEIIFSSSGLYGALHLPTALLMKAAGIEMKHLPTNGGGPALTALLGNNSQVLVSSIAAASAQIKAGKARALACFSAKRAASLSDVPTLKELGYDVEFSLWVGLFAPKGTPDEVIKKLREETKKAVATEQFAKAIDNIGDVVAYLDQPDFAKFWDVDAKRVEDAVRSIGKV 324          
BLAST of mRNA_P-wetherbeei_contig18315.1.1 vs. uniprot
Match: UPI001794F3BC (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Rhodoplanes sp. TaxID=1968906 RepID=UPI001794F3BC)

HSP 1 Score: 448 bits (1153), Expect = 9.340e-156
Identity = 222/324 (68.52%), Postives = 272/324 (83.95%), Query Frame = 1
Query:   37 MDRRYFIAGTAATTAALSSGTGIAQDAYPSRTVTLINPFPPGGAADVVGRPLAAVLEPILKQPVIIDTKTGAAGAVGAQVAASAKPDGYTLLVHIVSLSGFAEVDRIYGRPVKFTNDDFIPIARLIADPMVLLVNDQVPYKTLKELVEAAKAKPDSLLFSSSGLHGALHLPTALFLKAADIKMKHLPTNGGGPALTALIGNNSQVLASSFAAANAQIKAGKARALASFGAKRDPLHPEVPTMKELGYDIEFYLWVGLFAPKGTPAPIIDKLRGEVKKAVVTEKFESAIKNLGQAVAYQDAPEFKKFWDADAKRVVAAVQAIGKI 1008
            +DRR  + G A +  ALS G   A+D YPSR +T+INPFPPGGAADVV RP AAV+EPI++QP++I+TK GAAGAVGAQVAASAKPDGYTLL+H+VS+SGFAEVDR++GR  KFT DDF+P+ARLIADP VL+VNDQ PYKTL+E V+ A+ +P+ LLFSSSGL+GALHLP ALF+KAA ++++HLPTNGGGPALTAL+GNN+Q L SS AAA+ Q+KAGKARALASFGA R P  P+VPTMKELGYD+E+YLWVGLFAPKGTP PI+ KLR   ++A  ++ F  A+ NLGQ VAYQD PEF+ FWDADA+ +  AV++IGK+
Sbjct:    6 LDRRSLMLGAAVSVPALSLGPAHAED-YPSRPITIINPFPPGGAADVVARPFAAVVEPIIRQPMVIETKAGAAGAVGAQVAASAKPDGYTLLMHLVSISGFAEVDRLFGRKPKFTRDDFVPVARLIADPCVLIVNDQQPYKTLQEFVDDARKRPNELLFSSSGLYGALHLPMALFMKAAGLQIRHLPTNGGGPALTALVGNNAQALVSSIAAASGQMKAGKARALASFGATRAPAWPDVPTMKELGYDLEYYLWVGLFAPKGTPEPIVTKLRDVTRQAAASDAFRQAMTNLGQDVAYQDQPEFRTFWDADARHIEDAVRSIGKV 328          
BLAST of mRNA_P-wetherbeei_contig18315.1.1 vs. uniprot
Match: A0A537RW04_9PROT (Tripartite tricarboxylate transporter substrate binding protein (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537RW04_9PROT)

HSP 1 Score: 446 bits (1146), Expect = 6.130e-155
Identity = 225/312 (72.12%), Postives = 263/312 (84.29%), Query Frame = 1
Query:   73 TTAALSSGTGIAQDAYPSRTVTLINPFPPGGAADVVGRPLAAVLEPILKQPVIIDTKTGAAGAVGAQVAASAKPDGYTLLVHIVSLSGFAEVDRIYGRPVKFTNDDFIPIARLIADPMVLLVNDQVPYKTLKELVEAAKAKPDSLLFSSSGLHGALHLPTALFLKAADIKMKHLPTNGGGPALTALIGNNSQVLASSFAAANAQIKAGKARALASFGAKRDPLHPEVPTMKELGYDIEFYLWVGLFAPKGTPAPIIDKLRGEVKKAVVTEKFESAIKNLGQAVAYQDAPEFKKFWDADAKRVVAAVQAIGKI 1008
            T AAL++ +  AQ+ YPSR +T+INPFPPGGAADVV RP AA+LEP +KQ V+I+TK GAAG VGAQ AASAKPDGYTLLVHIVS+SGFAEVDR+YGRPVKFT DDFIPIAR IADPMVL+VND+ PYKTLKE +E  K +P+ L+FSSSG+HGALHLPTALF+KAA I+M+HLPT GGGPA+TAL+GNNSQV AS+ AA  +QIKAGKARALA FGA+R    P+VPT+KE GYDIEFYLWVGLFAPKGTP  I+ KLR E + AV T++F+ A+ NLGQ VAY D  EFK FWDADAKRV  AV+A+GK+
Sbjct:    1 TAAALATRSAHAQEVYPSRPITIINPFPPGGAADVVARPFAAILEPQIKQAVVIETKAGAAGQVGAQFAASAKPDGYTLLVHIVSISGFAEVDRLYGRPVKFTRDDFIPIARFIADPMVLVVNDKQPYKTLKEFIEDVKKRPNELVFSSSGMHGALHLPTALFMKAAGIQMRHLPTQGGGPAVTALLGNNSQVQASAIAAIISQIKAGKARALAVFGAQRSAALPDVPTLKESGYDIEFYLWVGLFAPKGTPDAIVAKLREETRNAVATDQFKGAMTNLGQEVAYLDQAEFKAFWDADAKRVEEAVRAVGKV 312          
BLAST of mRNA_P-wetherbeei_contig18315.1.1 vs. uniprot
Match: A0A3N5MG13_9HYPH (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A3N5MG13_9HYPH)

HSP 1 Score: 442 bits (1136), Expect = 4.770e-153
Identity = 227/324 (70.06%), Postives = 261/324 (80.56%), Query Frame = 1
Query:   37 MDRRYFIAGTAATTAALSSGTGIAQDAYPSRTVTLINPFPPGGAADVVGRPLAAVLEPILKQPVIIDTKTGAAGAVGAQVAASAKPDGYTLLVHIVSLSGFAEVDRIYGRPVKFTNDDFIPIARLIADPMVLLVNDQVPYKTLKELVEAAKAKPDSLLFSSSGLHGALHLPTALFLKAADIKMKHLPTNGGGPALTALIGNNSQVLASSFAAANAQIKAGKARALASFGAKRDPLHPEVPTMKELGYDIEFYLWVGLFAPKGTPAPIIDKLRGEVKKAVVTEKFESAIKNLGQAVAYQDAPEFKKFWDADAKRVVAAVQAIGKI 1008
            M RR FIAG        ++ TG AQ +YP+R +T+INPFPPGGAADVV RP AA LEPILKQPV+I+TK GAAG VGAQ AA+A PDGYTLLVHIVS+SGFAEVD+++GR  KFT  DF+PIAR    PMVLL NDQ  YKTL ELV+ AK +P+ ++FSSSGL+GALHLPTALF KAA I+M+HLPTNGGGPALTAL+GNN+QVL SS AAA+AQIKAGKARALA F AKR P  P+VPT+KELG+D+EF LWVGLFAPKGTP  ++ KLR E KKA  +E+F  AI NLG  +AYQD PEF KFWD DAKRV  AVQAIGKI
Sbjct:   15 MHRRRFIAGXXXXXXXFTTRTGAAQASYPTRAITIINPFPPGGAADVVARPFAAALEPILKQPVVIETKAGAAGQVGAQFAANATPDGYTLLVHIVSISGFAEVDKVFGRQPKFTRADFVPIARFTEGPMVLLANDQTAYKTLPELVDDAKKRPNQIIFSSSGLYGALHLPTALFAKAAGIEMRHLPTNGGGPALTALLGNNAQVLVSSVAAAHAQIKAGKARALACFSAKRAPALPDVPTLKELGFDVEFSLWVGLFAPKGTPEAVVAKLREEAKKAAASEQFVKAIDNLGDVLAYQDQPEFAKFWDEDAKRVEEAVQAIGKI 338          
BLAST of mRNA_P-wetherbeei_contig18315.1.1 vs. uniprot
Match: A0A1W6ZTI4_9HYPH (Uncharacterized protein n=2 Tax=Pseudorhodoplanes sinuspersici TaxID=1235591 RepID=A0A1W6ZTI4_9HYPH)

HSP 1 Score: 441 bits (1135), Expect = 6.530e-153
Identity = 223/326 (68.40%), Postives = 264/326 (80.98%), Query Frame = 1
Query:   37 MDRRYFIAGTAATTAALSSGT--GIAQDAYPSRTVTLINPFPPGGAADVVGRPLAAVLEPILKQPVIIDTKTGAAGAVGAQVAASAKPDGYTLLVHIVSLSGFAEVDRIYGRPVKFTNDDFIPIARLIADPMVLLVNDQVPYKTLKELVEAAKAKPDSLLFSSSGLHGALHLPTALFLKAADIKMKHLPTNGGGPALTALIGNNSQVLASSFAAANAQIKAGKARALASFGAKRDPLHPEVPTMKELGYDIEFYLWVGLFAPKGTPAPIIDKLRGEVKKAVVTEKFESAIKNLGQAVAYQDAPEFKKFWDADAKRVVAAVQAIGKI 1008
            MDRR F+AG+ A    L++ T    AQD YPSR +TLINPFPPGGAADVVGRP AAVLEPI+KQPV+I+TK GAAGAVGAQ AA+A+PDGYTLL+HIVS+SGFAEVD+++GR  KFT  DFIPIAR    PMVL+VN + PYKTLKEL++ AK +PD ++FSSSGL+GALHLPT LF+ AA IKM+HLPTNGGGPALTA++GNNSQVLASS AAANA IK+GK RALAS+  KR    P+VPTMKE G D+EFYLWVGLFAPKGTP  ++  +R   K AV ++KF +AI N+G  V Y D P+F KFWD DAKRV AAVQ+IGK+
Sbjct:   10 MDRRQFVAGSTAALTTLTTATLPSFAQDTYPSRPITLINPFPPGGAADVVGRPFAAVLEPIVKQPVVIETKAGAAGAVGAQFAANARPDGYTLLLHIVSISGFAEVDKLFGRQPKFTRADFIPIARFTEGPMVLVVNAETPYKTLKELIDDAKKRPDQIVFSSSGLYGALHLPTQLFMNAAGIKMRHLPTNGGGPALTAILGNNSQVLASSIAAANAHIKSGKLRALASYSDKRAASLPDVPTMKEQGLDVEFYLWVGLFAPKGTPEAVVKSIREAAKAAVASDKFATAISNVGDTVRYMDQPDFSKFWDEDAKRVEAAVQSIGKV 335          
BLAST of mRNA_P-wetherbeei_contig18315.1.1 vs. uniprot
Match: A0A363TVM3_9BRAD (Tat pathway signal protein n=1 Tax=Bradyrhizobiaceae bacterium TaxID=2072420 RepID=A0A363TVM3_9BRAD)

HSP 1 Score: 442 bits (1136), Expect = 1.470e-152
Identity = 226/336 (67.26%), Postives = 270/336 (80.36%), Query Frame = 1
Query:    1 QRPQSCIFGRTTMDRRYFIAGTAATTAALSSGTGIAQDAYPSRTVTLINPFPPGGAADVVGRPLAAVLEPILKQPVIIDTKTGAAGAVGAQVAASAKPDGYTLLVHIVSLSGFAEVDRIYGRPVKFTNDDFIPIARLIADPMVLLVNDQVPYKTLKELVEAAKAKPDSLLFSSSGLHGALHLPTALFLKAADIKMKHLPTNGGGPALTALIGNNSQVLASSFAAANAQIKAGKARALASFGAKRDPLHPEVPTMKELGYDIEFYLWVGLFAPKGTPAPIIDKLRGEVKKAVVTEKFESAIKNLGQAVAYQDAPEFKKFWDADAKRVVAAVQAIGKI 1008
            +R Q   F    MDRR F+ G+AA+ AALS     AQ+AYPSR VT +NPFPPGGA DVV RPLAAVLEPI+KQPV+I+TK GAAG VGAQ AA+A+PDGYTLL+HI S+SGFAEVD+++GR  KFT  DFIP+AR IADPM+++VNDQ PYKTLKE V+ AK +P+ ++ SSSGL+GALHLP ALF KAA I+++HLPT GGGPALTAL+GNNSQVL SS AAA+ Q+KAGK RALASFG +R P  P+VPT+KELGYD+EFYLWVGLFAPKGTP  +I   R   +KA   E F+ A+ N+GQ VAY D PEFK FWDADA+RV AAVQAIG++
Sbjct:   33 RRRQRSPFREDAMDRRCFVVGSAASAAALSLSPSWAQEAYPSRPVTFVNPFPPGGAVDVVARPLAAVLEPIVKQPVVIETKAGAAGQVGAQYAANARPDGYTLLMHITSISGFAEVDKLFGRAPKFTRADFIPVARFIADPMLIVVNDQQPYKTLKEFVDDAKKRPNGIVMSSSGLYGALHLPMALFNKAAGIELRHLPTAGGGPALTALLGNNSQVLCSSIAAASGQLKAGKLRALASFGGRRAPALPDVPTLKELGYDVEFYLWVGLFAPKGTPDAMIAAWREFSRKAAAAEAFKKAMGNVGQDVAYLDQPEFKAFWDADAQRVEAAVQAIGRV 368          
BLAST of mRNA_P-wetherbeei_contig18315.1.1 vs. uniprot
Match: A0A346A4B2_9HYPH (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Pseudolabrys taiwanensis TaxID=331696 RepID=A0A346A4B2_9HYPH)

HSP 1 Score: 439 bits (1129), Expect = 4.320e-152
Identity = 223/325 (68.62%), Postives = 269/325 (82.77%), Query Frame = 1
Query:   37 MDRRYFIAGTAATTAALSSGTGIAQDAYPSRTVTLINPFPPGGAADVVGRPLAAVLEPILKQPVIIDTKTGAAGAVGAQVAASAKPDGYTLLVHIVSLSGFAEVDRIYGRPVKFTNDDFIPIARLIADPMVLLVNDQVPYKTLKELVEAAKAKPDSLLFSSSGLHGALHLPTALFLKAAD-IKMKHLPTNGGGPALTALIGNNSQVLASSFAAANAQIKAGKARALASFGAKRDPLHPEVPTMKELGYDIEFYLWVGLFAPKGTPAPIIDKLRGEVKKAVVTEKFESAIKNLGQAVAYQDAPEFKKFWDADAKRVVAAVQAIGKI 1008
            + RR+F+AGTAA TAAL++G   A D YPS  VT+INPFPPGGA+DVV RPLAAVLEPILKQPV+I+TK GAAGAVGAQVAA+AKPDGYTLL HI S+SGFAEVD+++GR  KFT  DFIP+AR +ADP V++VNDQ PYKTLK+L E A+ +PD ++FSSSGL+ ALH+P AL+ KAA  +KM+HLPTNGGGPALTAL+GNNSQ LASS +A  AQIKAGK R LA FG KR    PEVPTMKELGY+IE+YLWVG+FAPKGTPAP+++ LRG  K+A  T++F++A+ NLGQ V + D P F KFWDADA R+ AAV+ IGK+
Sbjct:    7 LTRRHFVAGTAAATAALAAGPTFA-DTYPSHAVTVINPFPPGGASDVVTRPLAAVLEPILKQPVVIETKAGAAGAVGAQVAANAKPDGYTLLSHITSISGFAEVDKLFGRTPKFTRADFIPLARFVADPCVVIVNDQTPYKTLKDLTEDAQKRPDQIIFSSSGLYSALHIPMALYAKAAGGLKMRHLPTNGGGPALTALLGNNSQALASSVSACLAQIKAGKVRPLALFGDKRSKALPEVPTMKELGYNIEYYLWVGMFAPKGTPAPVVETLRGAFKQAAATDQFKTAMTNLGQEVEFLDQPAFAKFWDADAARIEAAVREIGKV 330          
BLAST of mRNA_P-wetherbeei_contig18315.1.1 vs. uniprot
Match: A0A327KWA4_9HYPH (Uncharacterized protein n=1 Tax=Rhodoplanes roseus TaxID=29409 RepID=A0A327KWA4_9HYPH)

HSP 1 Score: 437 bits (1124), Expect = 2.860e-151
Identity = 220/328 (67.07%), Postives = 271/328 (82.62%), Query Frame = 1
Query:   37 MDRRYFIAGTAATTAALSSGTG----IAQDAYPSRTVTLINPFPPGGAADVVGRPLAAVLEPILKQPVIIDTKTGAAGAVGAQVAASAKPDGYTLLVHIVSLSGFAEVDRIYGRPVKFTNDDFIPIARLIADPMVLLVNDQVPYKTLKELVEAAKAKPDSLLFSSSGLHGALHLPTALFLKAADIKMKHLPTNGGGPALTALIGNNSQVLASSFAAANAQIKAGKARALASFGAKRDPLHPEVPTMKELGYDIEFYLWVGLFAPKGTPAPIIDKLRGEVKKAVVTEKFESAIKNLGQAVAYQDAPEFKKFWDADAKRVVAAVQAIGKI 1008
            +DRR  + G A +  ALS G G    +A+D YP+R +T+INPFPPGGAADVV RP AAV+EPI+KQP++I+TK GAAGAVG Q AA+AKPDGYTLL+HIVS+SGFAEVDR++GR  KFT DDFIP+ARLIADP VL+VND+ PYKTL+E ++ AK +P+ L+FSSSGL+GALHLP ALFLKAA ++++HLPT GGGPA+TALIGNN+Q L SS AAA+ Q+KAG+ R LASFGA R P  P+VPTMKELG+D+E+YLWVGLFAPKGTP PI+ KLR   ++AV TE FE A+KN+GQ VAYQD  EFK FWD DA+R+  AV++IGK+
Sbjct:    7 IDRRSLMVGAAVSATALSLGPGSGPALAED-YPTRAITVINPFPPGGAADVVARPFAAVVEPIIKQPMVIETKAGAAGAVGGQFAANAKPDGYTLLMHIVSISGFAEVDRLFGRKPKFTRDDFIPVARLIADPCVLVVNDKQPYKTLQEFIDDAKKRPNELIFSSSGLYGALHLPMALFLKAAGLQVRHLPTAGGGPAVTALIGNNAQALVSSIAAASGQMKAGRVRPLASFGATRAPSLPDVPTMKELGFDLEYYLWVGLFAPKGTPEPIVTKLRDVTREAVKTEAFEKAMKNIGQDVAYQDQAEFKAFWDVDARRIEDAVRSIGKV 333          
BLAST of mRNA_P-wetherbeei_contig18315.1.1 vs. uniprot
Match: A0A537L353_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537L353_9PROT)

HSP 1 Score: 431 bits (1109), Expect = 3.450e-149
Identity = 223/324 (68.83%), Postives = 261/324 (80.56%), Query Frame = 1
Query:   37 MDRRYFIAGTAATTAALSSGTGIAQDAYPSRTVTLINPFPPGGAADVVGRPLAAVLEPILKQPVIIDTKTGAAGAVGAQVAASAKPDGYTLLVHIVSLSGFAEVDRIYGRPVKFTNDDFIPIARLIADPMVLLVNDQVPYKTLKELVEAAKAKPDSLLFSSSGLHGALHLPTALFLKAADIKMKHLPTNGGGPALTALIGNNSQVLASSFAAANAQIKAGKARALASFGAKRDPLHPEVPTMKELGYDIEFYLWVGLFAPKGTPAPIIDKLRGEVKKAVVTEKFESAIKNLGQAVAYQDAPEFKKFWDADAKRVVAAVQAIGKI 1008
            MDRR F+AGT   TAA  S    AQ+ YPSR VTL+NPFPPGGA DVVGRP AA LEP+LKQPV+++TK+GAAGAVGAQ AASA+PDGYTLL H+ S+SGFA VD ++GR  KFT  DFIP+ARL   PMVL+VNDQ PYKTLKE V+ AKA P+ L+FSSSGL+GALHLP AL +KAA I+++HLPT GGGPALTA++GNN+Q L SS AAANAQIKAGK RALA F A R    P+VPT+KELGYD+EF +WVGLFAPKGTP  +I +LR E KK   TE+F+SAI N+G  VAY D PEFK FWDADAKRV AAVQ+IG++
Sbjct:    1 MDRRTFLAGT---TAAALSTPSFAQE-YPSRPVTLVNPFPPGGAVDVVGRPFAAALEPLLKQPVVVETKSGAAGAVGAQFAASARPDGYTLLAHLPSISGFAAVDALFGRTPKFTRADFIPVARLTEGPMVLVVNDQQPYKTLKEFVDDAKANPNKLIFSSSGLYGALHLPAALLIKAAGIQLRHLPTAGGGPALTAVLGNNAQALVSSIAAANAQIKAGKLRALACFSASRAAAAPDVPTLKELGYDVEFSIWVGLFAPKGTPDAVIARLRAESKKVADTEQFKSAIANIGDVVAYLDQPEFKAFWDADAKRVEAAVQSIGRV 320          
BLAST of mRNA_P-wetherbeei_contig18315.1.1 vs. uniprot
Match: A0A537VDG7_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537VDG7_9PROT)

HSP 1 Score: 422 bits (1085), Expect = 1.710e-145
Identity = 212/325 (65.23%), Postives = 266/325 (81.85%), Query Frame = 1
Query:   37 MDRRYFIAGTAATTAALSSGTGIAQDAYPSRTVTLINPFPPGGAADVVGRPLAAVLEPILKQPVIIDTKTGAAGAVGAQVAASAKPDGYTLLVHIVSLSGFAEVDRIYGRPVKFTNDDFIPIARLIADPMVLLVNDQVPYKTLKELVEAAKAKPDSLLFSSSGLHGALHLPTALFLKAAD-IKMKHLPTNGGGPALTALIGNNSQVLASSFAAANAQIKAGKARALASFGAKRDPLHPEVPTMKELGYDIEFYLWVGLFAPKGTPAPIIDKLRGEVKKAVVTEKFESAIKNLGQAVAYQDAPEFKKFWDADAKRVVAAVQAIGKI 1008
            MDRR F+ G+AA  AAL +    AQDAYP+R +T+INPFPPGGA DVV RPLAAV+EP++++PV+I+TK+GAAG VGAQ AA+AKPDGYTLL H+ S+SGFAEVDR++GR  KFTN DFIPIAR +ADP VL+VND+ PYKTL ELV+ AK +P+ ++FSSSGL+GALH+PTALF  AA  +K++HLPT GGGPALTA +GNNSQVL SS +A+ +QIKAGKAR LA FG +R P  P+VPTMKE GYD+E+YLWVGLFAPKGTPA ++   R  + KA   E+F++A+ NLGQ +AY D PEF  FWDAD+KR+ AA+++IGK+
Sbjct:    1 MDRRSFVFGSAAAAAALKAS--FAQDAYPTRAITIINPFPPGGAVDVVMRPLAAVVEPMVQKPVVIETKSGAAGQVGAQFAANAKPDGYTLLSHLTSISGFAEVDRLFGRQPKFTNADFIPIARFVADPCVLIVNDEQPYKTLNELVDDAKKRPNEIVFSSSGLYGALHIPTALFTAAAGGLKLRHLPTQGGGPALTAFLGNNSQVLVSSISASLSQIKAGKARPLALFGRERSPALPDVPTMKEAGYDVEYYLWVGLFAPKGTPANVVTYWREVLNKAAHGEQFKAALANLGQELAYMDQPEFAAFWDADSKRIEAAIRSIGKV 323          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18315.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C2LQX2_9HYPH2.400e-15971.60Tripartite tricarboxylate transporter substrate bi... [more]
UPI001794F3BC9.340e-15668.52Tripartite tricarboxylate transporter substrate bi... [more]
A0A537RW04_9PROT6.130e-15572.12Tripartite tricarboxylate transporter substrate bi... [more]
A0A3N5MG13_9HYPH4.770e-15370.06Tripartite tricarboxylate transporter substrate bi... [more]
A0A1W6ZTI4_9HYPH6.530e-15368.40Uncharacterized protein n=2 Tax=Pseudorhodoplanes ... [more]
A0A363TVM3_9BRAD1.470e-15267.26Tat pathway signal protein n=1 Tax=Bradyrhizobiace... [more]
A0A346A4B2_9HYPH4.320e-15268.62Tripartite tricarboxylate transporter substrate bi... [more]
A0A327KWA4_9HYPH2.860e-15167.07Uncharacterized protein n=1 Tax=Rhodoplanes roseus... [more]
A0A537L353_9PROT3.450e-14968.83Tripartite tricarboxylate transporter substrate bi... [more]
A0A537VDG7_9PROT1.710e-14565.23Tripartite tricarboxylate transporter substrate bi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18315contigP-wetherbeei_contig18315:74..1084 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1205680.CAKO01000038_gene1586
PFAMsTctC
Model size1011
Max annot lvl204441|Rhodospirillales
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.01e-96
EggNOG OGsCOG3181@1|root,COG3181@2|Bacteria,1MU58@1224|Proteobacteria,2TQWK@28211|Alphaproteobacteria,2JRXA@204441|Rhodospirillales
DescriptionTripartite tricarboxylate transporter family receptor
Cds size1011
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186142.6350687-CDS-P-wetherbeei_contig18315:73..10841683186142.6350687-CDS-P-wetherbeei_contig18315:73..1084Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig18315 74..1084 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18315.1.1prot_P-wetherbeei_contig18315.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig18315 74..1084 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig18315.1.1

>prot_P-wetherbeei_contig18315.1.1 ID=prot_P-wetherbeei_contig18315.1.1|Name=mRNA_P-wetherbeei_contig18315.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=337bp
QRPQSCIFGRTTMDRRYFIAGTAATTAALSSGTGIAQDAYPSRTVTLINP
FPPGGAADVVGRPLAAVLEPILKQPVIIDTKTGAAGAVGAQVAASAKPDG
YTLLVHIVSLSGFAEVDRIYGRPVKFTNDDFIPIARLIADPMVLLVNDQV
PYKTLKELVEAAKAKPDSLLFSSSGLHGALHLPTALFLKAADIKMKHLPT
NGGGPALTALIGNNSQVLASSFAAANAQIKAGKARALASFGAKRDPLHPE
VPTMKELGYDIEFYLWVGLFAPKGTPAPIIDKLRGEVKKAVVTEKFESAI
KNLGQAVAYQDAPEFKKFWDADAKRVVAAVQAIGKI*
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mRNA from alignment at P-wetherbeei_contig18315:74..1084+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig18315.1.1 ID=mRNA_P-wetherbeei_contig18315.1.1|Name=mRNA_P-wetherbeei_contig18315.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1011bp|location=Sequence derived from alignment at P-wetherbeei_contig18315:74..1084+ (Phaeothamnion wetherbeei SAG_119_79)
CAACGACCGCAATCGTGCATCTTCGGGAGGACGACAATGGATCGCCGATA TTTCATCGCAGGCACTGCCGCAACGACTGCCGCGCTTTCCTCGGGGACAG GCATTGCCCAGGATGCCTATCCCTCCCGAACCGTCACACTCATCAATCCA TTCCCACCGGGCGGTGCCGCAGACGTCGTCGGCCGTCCGCTCGCCGCAGT GCTCGAGCCGATCCTGAAGCAGCCGGTCATCATCGACACCAAGACCGGTG CTGCCGGCGCGGTCGGCGCGCAAGTCGCTGCCAGCGCGAAACCAGACGGC TACACGCTGCTCGTCCACATCGTATCTCTATCGGGATTTGCAGAAGTCGA TCGCATCTATGGCCGGCCGGTAAAATTCACCAACGACGACTTCATCCCGA TCGCGCGGCTGATCGCCGACCCGATGGTGCTGCTCGTCAACGATCAGGTT CCCTACAAGACGCTGAAGGAACTGGTCGAGGCGGCGAAGGCCAAACCCGA CAGCCTGCTGTTCAGTTCGTCCGGCCTGCATGGCGCGCTGCATCTGCCGA CCGCGCTGTTCCTCAAGGCCGCCGACATCAAGATGAAACATCTGCCGACC AATGGTGGGGGGCCCGCACTGACCGCGCTGATCGGCAACAATTCCCAGGT GCTCGCCTCCTCGTTCGCTGCCGCCAATGCGCAAATCAAGGCCGGCAAGG CGCGCGCGCTTGCATCCTTCGGCGCCAAGCGCGATCCGCTTCATCCCGAA GTACCGACCATGAAGGAACTCGGTTACGACATCGAATTCTACCTGTGGGT CGGACTATTTGCACCCAAGGGCACACCCGCGCCGATCATCGACAAGCTGC GCGGCGAAGTGAAGAAGGCCGTCGTCACCGAGAAGTTCGAGAGCGCGATC AAGAACCTCGGCCAAGCGGTCGCCTACCAGGACGCCCCCGAGTTCAAGAA GTTCTGGGACGCCGACGCCAAGCGCGTTGTCGCCGCCGTCCAGGCCATCG GCAAGATCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig18315:74..1084+

>mRNA_P-wetherbeei_contig18315.1.1 ID=mRNA_P-wetherbeei_contig18315.1.1|Name=mRNA_P-wetherbeei_contig18315.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1011bp|location=Sequence derived from alignment at P-wetherbeei_contig18315:74..1084+ (Phaeothamnion wetherbeei SAG_119_79)
CAACGACCGCAATCGTGCATCTTCGGGAGGACGACAATGGATCGCCGATA
TTTCATCGCAGGCACTGCCGCAACGACTGCCGCGCTTTCCTCGGGGACAG
GCATTGCCCAGGATGCCTATCCCTCCCGAACCGTCACACTCATCAATCCA
TTCCCACCGGGCGGTGCCGCAGACGTCGTCGGCCGTCCGCTCGCCGCAGT
GCTCGAGCCGATCCTGAAGCAGCCGGTCATCATCGACACCAAGACCGGTG
CTGCCGGCGCGGTCGGCGCGCAAGTCGCTGCCAGCGCGAAACCAGACGGC
TACACGCTGCTCGTCCACATCGTATCTCTATCGGGATTTGCAGAAGTCGA
TCGCATCTATGGCCGGCCGGTAAAATTCACCAACGACGACTTCATCCCGA
TCGCGCGGCTGATCGCCGACCCGATGGTGCTGCTCGTCAACGATCAGGTT
CCCTACAAGACGCTGAAGGAACTGGTCGAGGCGGCGAAGGCCAAACCCGA
CAGCCTGCTGTTCAGTTCGTCCGGCCTGCATGGCGCGCTGCATCTGCCGA
CCGCGCTGTTCCTCAAGGCCGCCGACATCAAGATGAAACATCTGCCGACC
AATGGTGGGGGGCCCGCACTGACCGCGCTGATCGGCAACAATTCCCAGGT
GCTCGCCTCCTCGTTCGCTGCCGCCAATGCGCAAATCAAGGCCGGCAAGG
CGCGCGCGCTTGCATCCTTCGGCGCCAAGCGCGATCCGCTTCATCCCGAA
GTACCGACCATGAAGGAACTCGGTTACGACATCGAATTCTACCTGTGGGT
CGGACTATTTGCACCCAAGGGCACACCCGCGCCGATCATCGACAAGCTGC
GCGGCGAAGTGAAGAAGGCCGTCGTCACCGAGAAGTTCGAGAGCGCGATC
AAGAACCTCGGCCAAGCGGTCGCCTACCAGGACGCCCCCGAGTTCAAGAA
GTTCTGGGACGCCGACGCCAAGCGCGTTGTCGCCGCCGTCCAGGCCATCG
GCAAGATCTGA
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