mRNA_P-wetherbeei_contig18314.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig18314.1.1
Unique NamemRNA_P-wetherbeei_contig18314.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig18314.1.1 vs. uniprot
Match: A0A838G9D2_9CHLR (Gfo/Idh/MocA family oxidoreductase n=2 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A838G9D2_9CHLR)

HSP 1 Score: 449 bits (1155), Expect = 5.020e-156
Identity = 208/270 (77.04%), Postives = 234/270 (86.67%), Query Frame = 1
Query:    1 PLRVSRLCTTAKEVVDSGVLGTVENIQMTNNVPFYGSNYYHGWMRNEALTGGLWLQKATHDLDYLNYLVDSRQPSRIVAVESKNVFTGEMPAGLFCLDCELKTTCPESQYNLFYTQGILADLHDAESFWDGRWQCAFAVDTGNHDAATAIVQYPSGAHATYTQMFYARRGAAKRGAILTGYKGTLSFDWYTEEVVVHHHHVGRVERIAVSTGEHGHSGGDHELAHDFLAILYGTGESRATLQDGLLSAQMCLMAKRSCQESAFQPFVPLG 810
            PLR+S LC   KEV+DSGV+GTVEN+Q TNNVPFYGSNYYHGWMRNEALTGGLWLQKATHDLDYL +LV  + PSR++AVESK VFTGEMPAGL+CL+C ++  CPESQYNLFY QGIL D+ +AE +WDGRWQC+FA DTGNHDAATAI+QY SGAH TYTQMFYARRGAAKRGA++TGYKGT+SFDW T+E+VVHHHH GRVER  V  G  GH GGD  LAHDFLAILYGTG SRATL+DGLLS Q+CLMAK +C+ S FQPFVPLG
Sbjct:  124 PLRLSELCVMTKEVIDSGVIGTVENVQATNNVPFYGSNYYHGWMRNEALTGGLWLQKATHDLDYLTWLV-GQTPSRVIAVESKTVFTGEMPAGLYCLECPIQKECPESQYNLFYKQGILRDMSEAEGWWDGRWQCSFATDTGNHDAATAILQYESGAHLTYTQMFYARRGAAKRGAVITGYKGTVSFDWNTDEMVVHHHHSGRVERHRVDAGTTGHHGGDERLAHDFLAILYGTGPSRATLEDGLLSVQLCLMAKGACETSQFQPFVPLG 392          
BLAST of mRNA_P-wetherbeei_contig18314.1.1 vs. uniprot
Match: A0A7V9VUZ7_9CHLR (Gfo/Idh/MocA family oxidoreductase n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V9VUZ7_9CHLR)

HSP 1 Score: 425 bits (1092), Expect = 3.510e-148
Identity = 201/270 (74.44%), Postives = 225/270 (83.33%), Query Frame = 1
Query:    1 PLRVSRLCTTAKEVVDSGVLGTVENIQMTNNVPFYGSNYYHGWMRNEALTGGLWLQKATHDLDYLNYLVDSRQPSRIVAVESKNVFTGEMPAGLFCLDCELKTTCPESQYNLFYTQGILADLHDAESFWDGRWQCAFAVDTGNHDAATAIVQYPSGAHATYTQMFYARRGAAKRGAILTGYKGTLSFDWYTEEVVVHHHHVGRVERIAVSTGEHGHSGGDHELAHDFLAILYGTGESRATLQDGLLSAQMCLMAKRSCQESAFQPFVPLG 810
            PLR+S LC  AKE++DSG +G VENIQ  NNVPFYGSNYYHGWMR+E+LTGGLWLQKATHDLDYL YLV  + P+RIVAVESK VFTG MPAGL+CL+C ++  CPESQYNLFY QGIL D+ +AE FWDGRWQC+FA DTGNHDAATAI+QY SGAH TYTQMFYARRGAAKRGA  TGYKGT+SFDW T+EVVV     GRVER  V     GH GGD  LAHDFLAILYGTG SRATL++G+LSAQ+CLMAKR+C+ S FQPFVPL 
Sbjct:   17 PLRLSELCVIAKEIIDSGTIGAVENIQAVNNVPFYGSNYYHGWMRDESLTGGLWLQKATHDLDYLTYLV-GKTPTRIVAVESKTVFTGHMPAGLYCLECPIQKECPESQYNLFYMQGILDDMSEAEGFWDGRWQCSFATDTGNHDAATAILQYESGAHLTYTQMFYARRGAAKRGATFTGYKGTVSFDWNTDEVVVXXXXXGRVERHRVEATGGGHHGGDERLAHDFLAILYGTGPSRATLENGILSAQLCLMAKRACETSQFQPFVPLA 285          
BLAST of mRNA_P-wetherbeei_contig18314.1.1 vs. uniprot
Match: A0A6J4VP23_9CHLR (Uncharacterized protein (Fragment) n=1 Tax=uncultured Thermomicrobiales bacterium TaxID=1645740 RepID=A0A6J4VP23_9CHLR)

HSP 1 Score: 410 bits (1054), Expect = 5.640e-141
Identity = 195/265 (73.58%), Postives = 222/265 (83.77%), Query Frame = 1
Query:    1 PLRVSRLCTTAKEVVDSGVLGTVENIQMTNNVPFYGSNYYHGWMRNEALTGGLWLQKATHDLDYLNYLVDSRQPSRIVAVESKNVFTGEMPAGLFCLDCELKTTCPESQYNLFYTQGILADLHDAESFWDGRWQCAFAVDTGNHDAATAIVQYPSGAHATYTQMFYARRGAAKRGAILTGYKGTLSFDWYTEEVVVHHHHVGRVERIAVSTGEHGHSGGDHELAHDFLAILYGTGESRATLQDGLLSAQMCLMAKRSCQESAFQP 795
            PLR+S LC  AKE++DSGV+GT+EN+Q  NNVPFYGSNYYHGWMR+E+LTGGLWLQKATHDLDYL +LV +  P+R++AVESK VFTGEMPAGL+CL+C ++TTCPESQ NLF  QGI+ D+ +AES+WDGRWQC+FAVDTGNHDAATAI+QY SGAH  YTQ FYARRGAAKRGA L GYKGTLSFDWYT+EVVVH     RVER  +     GH GGD  LAHDFLAIL GTG SRATL DGLLSAQ+CLMAKR+C  S FQP
Sbjct:  124 PLRLSELCVMAKEILDSGVIGTIENVQAINNVPFYGSNYYHGWMRDESLTGGLWLQKATHDLDYLTWLVGT-PPARVIAVESKTVFTGEMPAGLYCLECPVRTTCPESQLNLFAMQGIIDDMREAESWWDGRWQCSFAVDTGNHDAATAILQYASGAHMVYTQNFYARRGAAKRGATLLGYKGTLSFDWYTDEVVVHXXXNARVERHKLEATGGGHHGGDKRLAHDFLAILNGTGPSRATLADGLLSAQLCLMAKRACATSQFQP 387          
BLAST of mRNA_P-wetherbeei_contig18314.1.1 vs. uniprot
Match: A0A7V8X619_9CHLR (Gfo/Idh/MocA family oxidoreductase n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V8X619_9CHLR)

HSP 1 Score: 379 bits (974), Expect = 2.990e-128
Identity = 181/283 (63.96%), Postives = 214/283 (75.62%), Query Frame = 1
Query:    1 PLRVSRLCTTAKEVVDSGVLGTVENIQMTNNVPFYGSNYYHGWMRNEALTGGLWLQKATHDLDYLNYLVDSRQPSRIVAVESKNVFTGEMPAGLFCLDCELKTTCPESQYNLFYTQGILADLHDAESFWDGRWQCAFAVDTGNHDAATAIVQYPSGAHATYTQMFYARRGAAKRGAILTGYKGTLSFDWYTEEVVVHHHHVGRVERIAVS--------------TGEHGHSGGDHELAHDFLAILYGTGESRATLQDGLLSAQMCLMAKRSCQESAFQPFVPL 807
            PLR S LC   KE++DSGV+G+VEN+Q  NNVPFYGSNY+HGWMR++++TGGLWLQKATHD DYL YLV +  P R+VAVESK VFTG+MPAGL+C+DC+L T CPESQYNLF  QGI+ DLH+   +W GRWQC+FA DTGNHD+ATAI+QY SGAH TYTQ FY+RR AA+RGA   GY GTL FD+Y  ++ VHHHH GRVER   S               G   H GGD ELA DFL +L+G G SRATL DGLLSAQ+CLMAKRSC+ S FQ + P+
Sbjct:  124 PLRTSTLCQQVKEMLDSGVIGSVENVQAINNVPFYGSNYFHGWMRDDSITGGLWLQKATHDFDYLTYLVGAA-PERLVAVESKTVFTGDMPAGLYCVDCKLYTICPESQYNLFSLQGIVDDLHNPTDWWQGRWQCSFAEDTGNHDSATAILQYASGAHLTYTQNFYSRRTAARRGATFVGYTGTLEFDFYRGDITVHHHHTGRVERHDYSGRESRLSGHPGGGSAGRGAHFGGDMELARDFLGLLFGDGLSRATLDDGLLSAQLCLMAKRSCETSQFQHYTPM 405          
BLAST of mRNA_P-wetherbeei_contig18314.1.1 vs. uniprot
Match: A0A6J4UT11_9CHLR (Oxidoreductase family protein n=1 Tax=uncultured Thermomicrobiales bacterium TaxID=1645740 RepID=A0A6J4UT11_9CHLR)

HSP 1 Score: 308 bits (789), Expect = 9.550e-101
Identity = 148/259 (57.14%), Postives = 182/259 (70.27%), Query Frame = 1
Query:    1 PLRVSRLCTTAKEVVDSGVLGTVENIQMTNNVPFYGSNYYHGWMRNEALTGGLWLQKATHDLDYLNYLVDSRQPSRIVAVESKNVFTGEMPAGLFCLDCELKTTCPESQYNLFYTQGILADLHDAESFWDGRWQCAFAVDTGNHDAATAIVQYPSGAHATYTQMFYARRGAAKRGAILTGYKGTLSFDWYTEEVVVHHHHVGRVERIAVSTGEHGHSGGDHELAHDFLAILYGTGESRATLQDGLLSAQMCLMAKRSCQ 777
            PLR+S LC  A+EV+ SG +GTVE++Q  NNVPFYGS YYHGWMR+E  TGGLWLQKATHD DYL  L+  + P  + A+ESK VFTG+MPAGL C+DC  +  CPES YNL+Y +       + +      W C+FA DTGNHD+ATAIV++ SG HA Y+Q FY RR AA+RGA L GY GT++FDWY  E+ VHHH  GRVER     G  GH GGD ELAHDFL  L G G  R +L +G+ SA++CL A+ +CQ
Sbjct:  124 PLRLSALCVAAREVIASGAIGTVEHVQAVNNVPFYGSTYYHGWMRDETETGGLWLQKATHDFDYLTSLI-GQDPVAVTAMESKTVFTGDMPAGLRCVDCWRQQECPESPYNLYYLRS------ETQRVEPNDWLCSFAPDTGNHDSATAIVRFRSGMHAVYSQNFYTRRSAARRGATLIGYLGTVAFDWYAGELTVHHHMSGRVERHEFDAGAGGHHGGDRELAHDFLLALSGGGPLRVSLAEGIASARLCLAARDACQ 375          
BLAST of mRNA_P-wetherbeei_contig18314.1.1 vs. uniprot
Match: A0A7V8VW25_9CHLR (Gfo/Idh/MocA family oxidoreductase (Fragment) n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V8VW25_9CHLR)

HSP 1 Score: 295 bits (754), Expect = 1.050e-96
Identity = 134/178 (75.28%), Postives = 156/178 (87.64%), Query Frame = 1
Query:    1 PLRVSRLCTTAKEVVDSGVLGTVENIQMTNNVPFYGSNYYHGWMRNEALTGGLWLQKATHDLDYLNYLVDSRQPSRIVAVESKNVFTGEMPAGLFCLDCELKTTCPESQYNLFYTQGILADLHDAESFWDGRWQCAFAVDTGNHDAATAIVQYPSGAHATYTQMFYARRGAAKRGAIL 534
            PLR+S LC   KE++DSGV+GT+EN+Q  NNVPFYGSNYYHGWMR+E+LTGGLWLQKATHDLDYL YL+  + P R++AVESK VFTGEMPAGL+CL+C ++TTCPESQ NLF  QGI+ D+ +AES+WDGRWQC+FAVDTGNHDAATAI+QY SGAHA YTQ FYARRGAAKRGA L
Sbjct:  124 PLRLSELCVMVKEILDSGVIGTIENVQAINNVPFYGSNYYHGWMRDESLTGGLWLQKATHDLDYLTYLI-GKPPVRMIAVESKTVFTGEMPAGLYCLECPVRTTCPESQLNLFAMQGIIDDMREAESWWDGRWQCSFAVDTGNHDAATAIMQYESGAHAVYTQNFYARRGAAKRGATL 300          
BLAST of mRNA_P-wetherbeei_contig18314.1.1 vs. uniprot
Match: A0A4P5V5Q2_9CHLR (Uncharacterized protein n=3 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A4P5V5Q2_9CHLR)

HSP 1 Score: 268 bits (684), Expect = 6.110e-85
Identity = 140/263 (53.23%), Postives = 172/263 (65.40%), Query Frame = 1
Query:    1 PLRVSRLCTTAKEVVDSGVLGTVENIQMTNNVPFYGSNYYHGWMRNEALTGGLWLQKATHDLDYLNYLVD----SRQPSRIVAVESKNVFTGEMPAGLFCLDCELKTTCPESQYNLFYTQGILADLHDAESFWDGR----WQCAFAVDTGNHDAATAIVQYPSGAHATYTQMFYARRGAAKRGAILTGYKGTLSFDWYTEEVVVHHHHVGRVERIAVSTGEHGHSGGDHELAHDFLAILYGTGESRATLQDGLLSAQMCLMAK 765
            PLRVS LC  A  +V SG LGT+  +Q  NNVP Y   YY GWMR+EA TGGLW+QKATHD DYL  L+     + QP+R++A+ESK VF G+ PAGL C +C+++  C ES Y      G       A S   GR     QCAFAVDTGNHD+A+A++Q+ SG H  YTQ F  RRGAA RGA + G+  TLSFDWY +EVVVHHHH  RVER +   G+ GH GGD EL  DF+  + G   SRA+L  GL SA++CL A+
Sbjct:  124 PLRVSPLCELAARIVRSGTLGTLAQLQAVNNVPAYSIGYYMGWMRDEAQTGGLWMQKATHDFDYLLSLLGDGELAGQPTRVIAMESKQVFRGDQPAGLHCRECDIRHECVESPY----LPG------SARSRQTGREAATLQCAFAVDTGNHDSASALIQFGSGLHVNYTQNFVTRRGAAARGATVIGHAATLSFDWYRDEVVVHHHHEARVERHSFGKGDEGHHGGDDELGRDFVKAMSGRASSRASLAIGLESARLCLRAR 376          
BLAST of mRNA_P-wetherbeei_contig18314.1.1 vs. uniprot
Match: A0A0Q9RJ01_9BACL (Oxidoreductase n=2 Tax=unclassified Paenibacillus TaxID=185978 RepID=A0A0Q9RJ01_9BACL)

HSP 1 Score: 259 bits (663), Expect = 7.710e-82
Identity = 137/263 (52.09%), Postives = 175/263 (66.54%), Query Frame = 1
Query:    1 PLRVSRLCTTAKEVVDSGVLGTVENIQMTNNVPFYGSNYYHGWMRNEALTGGLWLQKATHDLDYLNYLVDSRQPSRIVAVESKNVFTGEMPAGLFCLDCELKTTCPESQYNLFYTQGILADLHDAESFWDGRWQCAFAVDTGNHDAATAIVQYPSGAHATYTQMFYARRGAAKRGAILTGYKGTLSFDWYTEEVVVHHHHVGRVERIAVSTGEHGHSGGDHELAHDFLAILYGTGESRATLQDGLLSAQMCLMAKRSCQESAF 789
            PLRVS + T AKE+V SG LGTVE++Q  NNVP YG +YYH W R+E  TGGL+LQKATHD DY+N+L+D R P RI A++SK +F G    GL C++CE   TCPE  Y   + +G  +  +           C F VDTGN D+ +AI+QY +G H +Y+Q F+AR+ AA RGA L GYKGTL FDWYT+++ V  HH  RVE+  +ST E GH GGD  LA +F+ ++ GT  S A L+ GLLSA MCL AK S + S F
Sbjct:  127 PLRVSAMVTMAKEIVQSGKLGTVEHVQAINNVP-YGYDYYHTWYRDEEETGGLFLQKATHDFDYINHLLDIR-PVRICAMKSKQIFKGHHAEGLLCVNCEEYHTCPEGPYAKKHFRGEASVENSL---------CCFGVDTGNEDSGSAIIQYETGMHVSYSQNFFARKKAAARGARLLGYKGTLEFDWYTQQLKVFMHHTSRVEKYEIST-EDGHGGGDEVLALNFIHVMKGTARSVAPLEAGLLSAVMCLSAKESAENSMF 377          
BLAST of mRNA_P-wetherbeei_contig18314.1.1 vs. uniprot
Match: A0A433Y5J5_9BACL (Gfo/Idh/MocA family oxidoreductase n=2 Tax=Paenibacillus TaxID=44249 RepID=A0A433Y5J5_9BACL)

HSP 1 Score: 254 bits (649), Expect = 7.600e-80
Identity = 130/263 (49.43%), Postives = 169/263 (64.26%), Query Frame = 1
Query:    1 PLRVSRLCTTAKEVVDSGVLGTVENIQMTNNVPFYGSNYYHGWMRNEALTGGLWLQKATHDLDYLNYLVDSRQPSRIVAVESKNVFTGEMPAGLFCLDCELKTTCPESQYNLFYTQGILADLHDAESFWDGRWQCAFAVDTGNHDAATAIVQYPSGAHATYTQMFYARRGAAKRGAILTGYKGTLSFDWYTEEVVVHHHHVGRVERIAVSTGEHGHSGGDHELAHDFLAILYGTGESRATLQDGLLSAQMCLMAKRSCQESAF 789
            PLR + L   AKE+VDSG LGTVE++Q  NNVP YG  YYH W R+E +TGGL+LQKATHD DY+NYLV   +P  I A++SK +F G+ PA L C DC+ K TC ES             ++    F      C+FA DTGN D+ +A++ Y SG H +Y+Q F+ARRGAAKRG  L GYKGTL FDWYT ++ +H HH  R+E   +    +GHSGGD +L H+F+ ++ G  +S  +L DGLLSA MC+ A  S   + F
Sbjct:  123 PLRHTALVELAKEIVDSGKLGTVEHVQAVNNVP-YGGVYYHSWYRDEQITGGLFLQKATHDFDYINYLV-GHKPLAICAMKSKQIFKGDKPANLKCTDCDEKYTCAESTI-----------VNQIGEF------CSFAEDTGNEDSGSALIHYESGMHLSYSQNFFARRGAAKRGVRLLGYKGTLEFDWYTNKLEIHMHHEPRIETHQLDVDPNGHSGGDSKLLHNFIQVMRGREQSLTSLDDGLLSALMCIKANESANTNTF 366          
BLAST of mRNA_P-wetherbeei_contig18314.1.1 vs. uniprot
Match: UPI001CC3267D (Gfo/Idh/MocA family oxidoreductase n=2 Tax=Paenibacillus sp. IB182496 TaxID=2772509 RepID=UPI001CC3267D)

HSP 1 Score: 254 bits (649), Expect = 9.350e-80
Identity = 139/264 (52.65%), Postives = 167/264 (63.26%), Query Frame = 1
Query:    1 PLRVSRLCTTAKEVVDSGVLGTVENIQMTNNVPFYGSNYYHGWMRNEALTGGLWLQKATHDLDYLNYLVDSRQPSRIVAVESKNVFTGEMPAGLFCLDCELKTTCPESQYNLFYTQGILADLHDAESFWDGRWQCAFAVDTGNHDAATAIVQYPSGAHATYTQMFYARRGAAKRGAILTGYKGTLSFDWYTEEVVVHHHHVGRVERIAVSTGE-HGHSGGDHELAHDFLAILYGTGESRATLQDGLLSAQMCLMAKRSCQESAF 789
            PLR + L   AKE+VDSG +GTVE++Q  NNVP YG  YYH W R+E +TGGL+LQKATHD DYLN+L+  R P  + A++SK VF G  PAGL C DCE   TC ES        G             G + C FAVDTGN DA +A+++Y SG HA+Y+Q F+ARRGAA+RGA L GYKGTL FDWY  E+ VH HH  RVE  A+      GH GGD  L  +FL  + G   SR TL DGLLSA +CL A  S + S F
Sbjct:  126 PLRNTPLVRLAKEIVDSGKIGTVEHVQAVNNVP-YGGVYYHSWYRDERITGGLFLQKATHDFDYLNHLLGMR-PVAVCAMKSKQVFKGTKPAGLKCADCEENRTCEESALKAKPGPGR------------GEY-CCFAVDTGNEDAGSALLRYESGMHASYSQNFFARRGAARRGARLLGYKGTLEFDWYASELKVHMHHEARVESHAIDASALDGHGGGDGALVDNFLETIRGRERSRTTLDDGLLSALLCLKANESAETSRF 374          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18314.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A838G9D2_9CHLR5.020e-15677.04Gfo/Idh/MocA family oxidoreductase n=2 Tax=Chlorof... [more]
A0A7V9VUZ7_9CHLR3.510e-14874.44Gfo/Idh/MocA family oxidoreductase n=1 Tax=Chlorof... [more]
A0A6J4VP23_9CHLR5.640e-14173.58Uncharacterized protein (Fragment) n=1 Tax=uncultu... [more]
A0A7V8X619_9CHLR2.990e-12863.96Gfo/Idh/MocA family oxidoreductase n=1 Tax=Chlorof... [more]
A0A6J4UT11_9CHLR9.550e-10157.14Oxidoreductase family protein n=1 Tax=uncultured T... [more]
A0A7V8VW25_9CHLR1.050e-9675.28Gfo/Idh/MocA family oxidoreductase (Fragment) n=1 ... [more]
A0A4P5V5Q2_9CHLR6.110e-8553.23Uncharacterized protein n=3 Tax=Chloroflexi bacter... [more]
A0A0Q9RJ01_9BACL7.710e-8252.09Oxidoreductase n=2 Tax=unclassified Paenibacillus ... [more]
A0A433Y5J5_9BACL7.600e-8049.43Gfo/Idh/MocA family oxidoreductase n=2 Tax=Paeniba... [more]
UPI001CC3267D9.350e-8052.65Gfo/Idh/MocA family oxidoreductase n=2 Tax=Paeniba... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18314contigP-wetherbeei_contig18314:554..1363 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1347086.CCBA010000023_gene2158
Preferred nameyteT
PFAMsGFO_IDH_MocA,GFO_IDH_MocA_C
Model size810
Max annot lvl91061|Bacilli
Hectar predicted targeting categoryother localisation
Exons1
Evalue8.4e-77
EggNOG OGsCOG0673@1|root,COG0673@2|Bacteria,1TSUT@1239|Firmicutes,4HDBM@91061|Bacilli,1ZD0S@1386|Bacillus
DescriptionOxidoreductase family, C-terminal alpha/beta domain
Cds size810
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186142.6109967-CDS-P-wetherbeei_contig18314:553..13631683186142.6109967-CDS-P-wetherbeei_contig18314:553..1363Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig18314 554..1363 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18314.1.1prot_P-wetherbeei_contig18314.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig18314 554..1363 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig18314.1.1

>prot_P-wetherbeei_contig18314.1.1 ID=prot_P-wetherbeei_contig18314.1.1|Name=mRNA_P-wetherbeei_contig18314.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=270bp
PLRVSRLCTTAKEVVDSGVLGTVENIQMTNNVPFYGSNYYHGWMRNEALT
GGLWLQKATHDLDYLNYLVDSRQPSRIVAVESKNVFTGEMPAGLFCLDCE
LKTTCPESQYNLFYTQGILADLHDAESFWDGRWQCAFAVDTGNHDAATAI
VQYPSGAHATYTQMFYARRGAAKRGAILTGYKGTLSFDWYTEEVVVHHHH
VGRVERIAVSTGEHGHSGGDHELAHDFLAILYGTGESRATLQDGLLSAQM
CLMAKRSCQESAFQPFVPLG
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mRNA from alignment at P-wetherbeei_contig18314:554..1363-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig18314.1.1 ID=mRNA_P-wetherbeei_contig18314.1.1|Name=mRNA_P-wetherbeei_contig18314.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=810bp|location=Sequence derived from alignment at P-wetherbeei_contig18314:554..1363- (Phaeothamnion wetherbeei SAG_119_79)
CCGCTGCGGGTCTCCCGCCTCTGCACGACGGCGAAGGAGGTCGTGGATTC CGGCGTGCTCGGCACGGTCGAAAACATCCAGATGACGAACAACGTGCCCT TCTACGGCTCCAACTACTACCACGGCTGGATGCGCAACGAGGCGCTCACC GGCGGCCTCTGGCTCCAGAAGGCGACCCACGACCTCGACTACCTGAACTA CCTGGTGGATAGCCGGCAGCCGTCGCGGATCGTCGCGGTCGAATCGAAGA ACGTCTTCACCGGCGAGATGCCGGCCGGGCTCTTCTGCCTGGACTGCGAG CTGAAGACGACCTGCCCCGAGAGCCAGTACAACCTCTTCTACACGCAGGG GATCCTCGCCGACCTCCACGATGCCGAATCGTTTTGGGATGGCCGCTGGC AGTGCGCCTTCGCGGTGGACACCGGCAATCACGATGCCGCGACCGCCATC GTGCAGTACCCCTCCGGCGCGCACGCGACCTACACGCAGATGTTCTACGC CCGGCGCGGCGCGGCGAAGCGCGGCGCGATCCTCACCGGCTACAAGGGCA CGCTCTCCTTCGACTGGTATACGGAGGAGGTCGTCGTCCATCACCATCAC GTCGGACGGGTAGAGCGGATCGCCGTCTCGACCGGCGAGCATGGCCACAG CGGCGGCGATCACGAGCTGGCGCACGATTTCCTCGCCATCCTCTACGGCA CCGGCGAGAGCCGCGCCACCTTGCAGGATGGCCTTCTGAGCGCCCAGATG TGCCTGATGGCGAAGCGGAGCTGCCAGGAGAGCGCCTTCCAGCCCTTCGT GCCGCTCGGT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig18314:554..1363-

>mRNA_P-wetherbeei_contig18314.1.1 ID=mRNA_P-wetherbeei_contig18314.1.1|Name=mRNA_P-wetherbeei_contig18314.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=810bp|location=Sequence derived from alignment at P-wetherbeei_contig18314:554..1363- (Phaeothamnion wetherbeei SAG_119_79)
CCGCTGCGGGTCTCCCGCCTCTGCACGACGGCGAAGGAGGTCGTGGATTC
CGGCGTGCTCGGCACGGTCGAAAACATCCAGATGACGAACAACGTGCCCT
TCTACGGCTCCAACTACTACCACGGCTGGATGCGCAACGAGGCGCTCACC
GGCGGCCTCTGGCTCCAGAAGGCGACCCACGACCTCGACTACCTGAACTA
CCTGGTGGATAGCCGGCAGCCGTCGCGGATCGTCGCGGTCGAATCGAAGA
ACGTCTTCACCGGCGAGATGCCGGCCGGGCTCTTCTGCCTGGACTGCGAG
CTGAAGACGACCTGCCCCGAGAGCCAGTACAACCTCTTCTACACGCAGGG
GATCCTCGCCGACCTCCACGATGCCGAATCGTTTTGGGATGGCCGCTGGC
AGTGCGCCTTCGCGGTGGACACCGGCAATCACGATGCCGCGACCGCCATC
GTGCAGTACCCCTCCGGCGCGCACGCGACCTACACGCAGATGTTCTACGC
CCGGCGCGGCGCGGCGAAGCGCGGCGCGATCCTCACCGGCTACAAGGGCA
CGCTCTCCTTCGACTGGTATACGGAGGAGGTCGTCGTCCATCACCATCAC
GTCGGACGGGTAGAGCGGATCGCCGTCTCGACCGGCGAGCATGGCCACAG
CGGCGGCGATCACGAGCTGGCGCACGATTTCCTCGCCATCCTCTACGGCA
CCGGCGAGAGCCGCGCCACCTTGCAGGATGGCCTTCTGAGCGCCCAGATG
TGCCTGATGGCGAAGCGGAGCTGCCAGGAGAGCGCCTTCCAGCCCTTCGT
GCCGCTCGGT
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