mRNA_P-wetherbeei_contig1831.2.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1831.2.2 vs. uniprot
Match: A0A6H5KTC2_9PHAE (Ribosomal_L28e domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KTC2_9PHAE) HSP 1 Score: 154 bits (389), Expect = 9.990e-44 Identity = 82/159 (51.57%), Postives = 105/159 (66.04%), Query Frame = 1
Query: 283 MVQLSKDLTWLLVKDNNCFLQKRNGKTPRSGFITMSAEPLNLTNKNSFKASGLANTRAVGIEEGKDFKGNSVAFLQLKASCIFGGGASKPKLAVGATLLKKCWRSGANTVTKQVEGTYYRPDLTGAALTRWSKIHRSIRTAGGHKKPMIVKAGRSSKSA 759
M +S +L W LV+ N CFL KRNG+T RSG + ++AEP NLTN NS+K SGLAN++AVGI+ KD K A + LK+S +KPK +VG +LLKK S + + KQ GT YRPDL AAL RWSK+HR++R G +KPM V AGR + A
Sbjct: 1 MTNVSNELVWSLVRRNTCFLYKRNGQTKRSGKVVLTAEPNNLTNVNSYKYSGLANSKAVGIQFAKDPKDRPCAAITLKSS----KNGNKPKKSVGRSLLKKTHPSVSQAIMKQTGGTNYRPDLQHAALVRWSKVHRALRVQKGERKPMTVNAGRKNLKA 155
BLAST of mRNA_P-wetherbeei_contig1831.2.2 vs. uniprot
Match: A0A836CDH5_9STRA (Putative 60S ribosomal protein L28 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDH5_9STRA) HSP 1 Score: 134 bits (337), Expect = 6.140e-36 Identity = 76/152 (50.00%), Postives = 94/152 (61.84%), Query Frame = 1
Query: 304 LTWLLVKDNNCFLQKRNGKTPRSGFITMSAEPLNLTNKNSFKASGLANTRAVGIEEGKDFKGNSVAFLQLKASCIFGGGASKPKLAVGATLLKKCWRSGANTVTKQVEGTYYRPDLTGAALTRWSKIHRSIRTAGGHKKPMIVKAGRSSKSA 759
L W LV+ NNCF+QKRNG T RSG + +S EP+NL N +SFK SGLAN++AVGI EG D KG L K+S ++P AV TLLKK RS A V GT+YR DLT AL R+ ++R+ R G KPM+ K R+ KSA
Sbjct: 8 LVWSLVRQNNCFMQKRNGNTRRSGRVVLSGEPMNLKNVHSFKYSGLANSKAVGIAEGADDKGRPCVVLTQKSSKK----VNQPAKAVAQTLLKKNNRSSARAVKAITAGTFYREDLTQDALARFCIVNRATRAKRGLAKPMVTKGRRAKKSA 155
BLAST of mRNA_P-wetherbeei_contig1831.2.2 vs. uniprot
Match: K0RNK4_THAOC (Ribosomal_L28e domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RNK4_THAOC) HSP 1 Score: 107 bits (268), Expect = 1.240e-25 Identity = 66/160 (41.25%), Postives = 92/160 (57.50%), Query Frame = 1
Query: 283 MVQLSKDLTWLLVKDNNCFLQKRNGKTPRSGFITMSAEPLNLTNKNSFKASGLANTRAVGIEEGKDFKGNSVAFLQLKAS-CIFGGGASKPKLAVGATLLKKCWRSGANTVTKQVEGTYYRPDLTGAALTRWSKIHRSIRTAGGHKKPMIVKAGRSSKSA 759
MV + L W LVK+NN F++K++G+T RSG I S E NLTNK+S+K SGLAN++ + I G++ A L LK G + K ++A L K +R T+ Q YYRPDL AAL +++ ++RS R A G KK + VK GR + A
Sbjct: 1 MVAAADSLVWELVKNNNSFMRKKSGRTSRSGSIRFSVERGNLTNKSSYKYSGLANSKTIDISS----VGDNKAALTLKTKKAATSGKSGKTEIA-----LNKDFRRSEKTIKSQATDNYYRPDLKSAALAKYTVVYRSNRVAKGVKKAVPVKKGRGNSEA 151
BLAST of mRNA_P-wetherbeei_contig1831.2.2 vs. uniprot
Match: A0A7S2EU82_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EU82_TRICV) HSP 1 Score: 106 bits (264), Expect = 4.120e-25 Identity = 66/157 (42.04%), Postives = 85/157 (54.14%), Query Frame = 1
Query: 283 MVQLSKDLTWLLVKDNNCFLQKRNGKTPRSGFITMSAEPLNLTNKNSFKASGLANTRAVGIEEGKDFKGNSVAFLQLKASCIFGGGASKPKLAVGATLLKKCWRSGANTVTKQVEGTYYRPDLTGAALTRWSKIHRSIRTAGGHKKPMIVKAGRSSK 753
MV L W LV NNCF++K NG+T RSG I S EP NL + ++ + SG+ANT+AVGI DF A L K + ++ PK L K +R T+ QV YRPDL GAA ++S ++R+ R A G KK VK GRS K
Sbjct: 1 MVHCPDALVWQLVNRNNCFMKKTNGRTSRSGSIKFSVEPGNLRSLSTLRYSGIANTKAVGI----DFAEGDKAVLTTKTASK---ASTAPKKGRATIPLNKDYRRTEKTIRSQVLDNRYRPDLVGAATAKYSAVYRANRFAKGVKKAPAVKKGRSKK 150
BLAST of mRNA_P-wetherbeei_contig1831.2.2 vs. uniprot
Match: A0A7S2DNV5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DNV5_9STRA) HSP 1 Score: 103 bits (257), Expect = 5.880e-24 Identity = 64/159 (40.25%), Postives = 81/159 (50.94%), Query Frame = 1
Query: 283 MVQLSKDLTWLLVKDNNCFLQKRNGKTPRSGFITMSAEPLNLTNKNSFKASGLANTRAVGI---EEGKDFKGNSVAFLQLKASCIFGGGASKPKLAVGATLLKKCWRSGANTVTKQVEGTYYRPDLTGAALTRWSKIHRSIRTAGGHKKPMIVKAGRSS 750
M LTW+LVK+ NCF QKRNG+T RSG I +S+EP NL N N+FK SGLAN++A+ EEG+D + LK S +P L K +R + Q YR DL AAL RWS +HR + G KP K + S
Sbjct: 1 MATCPDSLTWMLVKNQNCFQQKRNGQTKRSGMIVLSSEPGNLRNINAFKYSGLANSKAIRFDFKEEGEDDDKKIKMSMGLKIS----KNGKRPNKQYSTIPLNKDFRRVEKCIKAQTVDQAYRADLLDAALARWSALHRYSKVKKGIMKPAYFKPAKGS 155
BLAST of mRNA_P-wetherbeei_contig1831.2.2 vs. uniprot
Match: A0A6V2ABZ3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2ABZ3_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 1.840e-22 Identity = 62/156 (39.74%), Postives = 86/156 (55.13%), Query Frame = 1
Query: 283 MVQLSKDLTWLLVKDNNCFLQKRNGKTPRSGFITMSAEPLNLTNKNSFKASGLANTRAVGIEEGKDFKGNSVAFLQLKASCIFGGGASKPKLAVGATLLKKCWRSGANTVTKQVEGTYYRPDLTGAALTRWSKIHRSIRTAGGHKKPMIVKAGRSS 750
MVQ+S L W LVK N F++K NG++ RSG I S E N+ + NSFK SGLAN++ + I D +G L K ++ K AT L K +R +T+ Q YYRPDL+ AL +WS ++R+ R A G KK + +K GR +
Sbjct: 1 MVQISDSLCWELVKKNTSFMKKVNGRSRRSGTIQFSVEKGNVKSINSFKYSGLANSKTIDIASTADNRG----MLSTKTKKAH----NEVKKGQAATPLNKDFRRVEHTIKSQALDNYYRPDLSKDALAKWSAVYRANRYAKGIKKTLPMKKGRKT 148
BLAST of mRNA_P-wetherbeei_contig1831.2.2 vs. uniprot
Match: A0A1Z5JGY5_FISSO (Large subunit ribosomal protein L28e n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JGY5_FISSO) HSP 1 Score: 97.8 bits (242), Expect = 7.170e-22 Identity = 59/156 (37.82%), Postives = 86/156 (55.13%), Query Frame = 1
Query: 283 MVQLSKDLTWLLVKDNNCFLQKRNGKTPRSGFITMSAEPLNLTNKNSFKASGLANTRAVGIEEGKDFKGNSVAFLQLKASCIFGGGASKPKLAVGATLLKKCWRSGANTVTKQVEGTYYRPDLTGAALTRWSKIHRSIRTAGGHKKPMIVKAGRSS 750
MV + LTW +V+ NNCFL+KRNG+T RSG + S EP N + N K S +AN++A+ + F G + A L K + G S K+AV + K +R + Q +YR DL GA L +++ ++++ R A G KP+ VK GR S
Sbjct: 1 MVAIPDQLTWEIVRRNNCFLKKRNGQTKRSGSVQFSVEPGNCKSLNQLKYSAIANSKALDVV----FSGENRAQLIKKTA-----GKSGSKVAVAKINVNKDFRRSEKVIVGQGIDNFYRQDLKGAVLAKYTAVYQANRRAKGITKPVPVKKGRKS 147
BLAST of mRNA_P-wetherbeei_contig1831.2.2 vs. uniprot
Match: A0A7S0G6T1_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0G6T1_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 6.390e-21 Identity = 61/156 (39.10%), Postives = 89/156 (57.05%), Query Frame = 1
Query: 283 MVQLSKDLTWLLVKDNNCFLQKRNGKTPRSGFITMSAEPLNLTNKNSFKASGLANTRAVGIEEGKDFKGNSVAFLQLKASCIFGGGASKPKLAVGATLLKKCWRSGANTVTKQVEGTYYRPDLTGAALTRWSKIHRSIRTA-GGHKKPMIVKAGRS 747
MVQ+S+ L W LVK+NNCF++ RNG++ R+G I S+EP NL N ++F+ SG+ + + I D N V L++K+ + K + T L KC+R T+ Q YYR DL AAL ++S I+R + A G KK + VK GR+
Sbjct: 1 MVQISESLAWELVKNNNCFMKIRNGRSARTGSIRFSSEPGNLRNISTFQDSGIVKEKTLDIAATSD---NRVT-LKIKSK------SGK----IRTTPLNKCFRRSEKTIMSQAISNYYRSDLKKAALAKYSAIYRGNKVATGSTKKRVPVKKGRN 142
BLAST of mRNA_P-wetherbeei_contig1831.2.2 vs. uniprot
Match: A0A448YV76_9STRA (Ribosomal_L28e domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YV76_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 2.240e-20 Identity = 56/156 (35.90%), Postives = 84/156 (53.85%), Query Frame = 1
Query: 283 MVQLSKDLTWLLVKDNNCFLQKRNGKTPRSGFITMSAEPLNLTNKNSFKASGLANTRAVGIEEGKDFKGNSVAFLQLKASCIFGGGASKPKLAVGATLLKKCWRSGANTVTKQVEGTYYRPDLTGAALTRWSKIHRSIRTAGGHKKPMIVKAGRSS 750
MV +S L W ++K NN FL+KRNGKT RSG I S+E N+ + N FK SGLANT+ + D K + ++ + C K +A+ K +R +T+ K +YR DL A L +W+K++++ + A G KK + K GR +
Sbjct: 1 MVAVSDQLVWEVIKSNNSFLKKRNGKTSRSGKIEFSSEKGNVKSLNRFKYSGLANTKVCDVVCTDDNKAELI--VKTASKCATQPAKGKASIALN----KSDFRKVESTIKKSTSDVFYRRDLEAAMLGKWTKVYQANKRANGVKKGVPPKMGRGT 150
BLAST of mRNA_P-wetherbeei_contig1831.2.2 vs. uniprot
Match: U9TQU6_RHIID (Ribosomal_L28e domain-containing protein n=6 Tax=Rhizophagus TaxID=1129544 RepID=U9TQU6_RHIID) HSP 1 Score: 93.6 bits (231), Expect = 2.480e-20 Identity = 59/143 (41.26%), Postives = 80/143 (55.94%), Query Frame = 1
Query: 292 LSKDLTWLLVKDNNCFLQKRNGKTPRSGFITMSAEPLNLTNKNSFKASGLANTRAVGIEEGKDFKGNSVAFLQLKASCIFGGGASKPKLAVGATLLKKCWRSGANTVTKQVEGTYYRPDLTGAALTRWSKIHRSIRTAGGHKK 720
+S DLTWLLV++N+ FL KRNG + +S+EP NLTN NSFK SGLAN +A+GI G +G +V + + KP A+ L K R A + T + ++YRPDL AAL R S I++S + H K
Sbjct: 1 MSADLTWLLVRNNSSFLVKRNG-------LELSSEPNNLTNLNSFKYSGLANKKAIGITPGPSNRGVTVVAKKTNIASY------KPAKAINKVTLTKGVRRSAKSFTSLLTKSHYRPDLRKAALARISAIYQSQKPPKVHAK 130 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1831.2.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1831.2.2 >prot_P-wetherbeei_contig1831.2.2 ID=prot_P-wetherbeei_contig1831.2.2|Name=mRNA_P-wetherbeei_contig1831.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=160bp MVQLSKDLTWLLVKDNNCFLQKRNGKTPRSGFITMSAEPLNLTNKNSFKAback to top mRNA from alignment at P-wetherbeei_contig1831:3789..5048+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1831.2.2 ID=mRNA_P-wetherbeei_contig1831.2.2|Name=mRNA_P-wetherbeei_contig1831.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1260bp|location=Sequence derived from alignment at P-wetherbeei_contig1831:3789..5048+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1831:3789..5048+ >mRNA_P-wetherbeei_contig1831.2.2 ID=mRNA_P-wetherbeei_contig1831.2.2|Name=mRNA_P-wetherbeei_contig1831.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=480bp|location=Sequence derived from alignment at P-wetherbeei_contig1831:3789..5048+ (Phaeothamnion wetherbeei SAG_119_79)back to top |