mRNA_P-wetherbeei_contig18279.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig18279.1.1
Unique NamemRNA_P-wetherbeei_contig18279.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig18279.1.1 vs. uniprot
Match: A0A1G0G5Z5_9GAMM (Porin_4 domain-containing protein n=1 Tax=Gammaproteobacteria bacterium RBG_16_51_14 TaxID=1798265 RepID=A0A1G0G5Z5_9GAMM)

HSP 1 Score: 355 bits (910), Expect = 5.820e-116
Identity = 214/448 (47.77%), Postives = 267/448 (59.60%), Query Frame = 1
Query:    1 IAAAVGAAAFGAGLAAPAGAVVVVGGDNGWEVSFDGNVNAFYTVGDYDEGYFTEAADKVSSRVHSGYLPAFFSFNVKSPTIEGMTGSARISFAPTIHNGGNKTQFASQSGNVGPV----PGINGATIDTREVVANLSGAFGEVSFGRTLSLFGRNAILNDMTLFGVGFAPGADSF---GSVTFGRTGHGYTYPDFAARFQYTTPVVNGFQIALGVYDPSNFSGVTAYGPAGSGLGSLLDENHTPRIESEVSYSTAFTGGSFKAWVDALWQDTGSSCSGTTLTAGGISANCGDMNTHAFGAGTKIGYMGFEFVGYYHENEGLGLTAQF-NQNAVWFDGSGN------IRERKGDGFYLQGTYAFSGKTKVGVSYGEGNLDAIDAAGVAANGVGTHVERQLWTVGVYHDVSSWLRLIAEYNRGELNTHTAGKNPGA---NTFSVGSFLFW 1293
            +AAAVG A       APAGA VVVGGDNGWE+SF GNVNAFY   + D G  +    + SSRV SG+LPAFF+F+ KSPT+ G+TGSAR SFAPTI      T  A      GP      GI GATIDTREVVA++SG+FG +S+GRTLS FGR AIL DMTLFGVG   G  S    G VT GR G GY YP+F +R  +T+P +NGF +++G+YDP+  S     G A + L     E   PR E EV Y+TA+T G+   WVD  WQ+         + A GIS N  D +   +GAG +    GFE  GYY++ + L  T  F    A    G  N        +   DGFY+QGTY F+G+TKVGVSYGE N D         +     VE+ +WTVGVYHD++SWLR++AEY+  E    TAG +      ++FSVGSF+ W
Sbjct:   10 LAAAVGTAXXXXXXXAPAGAAVVVGGDNGWEISFSGNVNAFYQHINCDTGCSSAGGGEDSSRVTSGFLPAFFTFSAKSPTVNGLTGSARFSFAPTIQTAKQHTDLAG----AGPAGIGGSGIEGATIDTREVVADISGSFGTISYGRTLSHFGRQAILKDMTLFGVGGMHGGLSVTDSGVVTTGRVGLGYVYPNFESRLAWTSPNMNGFGLSVGIYDPAEPS----LGAAPNQL-----ETDVPRFEGEVMYTTAYTNGAASIWVDGTWQE-------VEVNAAGISMNGADYDREGWGAGAQASMSGFELTGYYYDGDNLETTLGFLTTPATSLAGVPNTTAPTQFEDSDNDGFYVQGTYTFNGRTKVGVSYGESNEDG--------DTFYNEVEQDMWTVGVYHDITSWLRVMAEYSEAETEVTTAGVSATTLEYDSFSVGSFILW 429          
BLAST of mRNA_P-wetherbeei_contig18279.1.1 vs. uniprot
Match: A0A1G0K1H8_9GAMM (Porin_4 domain-containing protein n=1 Tax=Gammaproteobacteria bacterium RIFCSPLOWO2_02_FULL_61_13 TaxID=1798300 RepID=A0A1G0K1H8_9GAMM)

HSP 1 Score: 295 bits (754), Expect = 1.220e-92
Identity = 191/451 (42.35%), Postives = 245/451 (54.32%), Query Frame = 1
Query:    1 IAAAVGAAAFGAGLAAPAGAVVVVGGDNGWEVSFDGNVNAFYTVGDYDEGYFTEAADKVSSRVHSGYLPAFFSFNVKSPTIEGMTGSARISFAPTIHNGGNKTQFASQSGNVGPVPGINGATIDTREVVANLSGAFGEVSFGRTLSLFGRNAILNDMTLFGVGFAPGADSFGSVTFGRTGHGYTYPDFAARFQYTTPVVNGFQIALGVYDPSNFSGVTAYGPAGSGLGSLLDENHTPRIESEVSYSTAFTGGSFKAWVDALWQDTGSSCS----------------GTTLTAGG---ISANCGDMNTHAFGAGTKIGYMGFEFVGYYHENEGLG-LTAQFNQNAVWFDGSGNIRERKGDGFYLQGTYAFSGKTKVGVSYGEGNLDAIDAAGVAANGVGTHVERQLWTVGVYHDVSSWLRLIAEYNRGELNTHTAGKNPGANTFSVGSFLFW 1293
            +AAA+G AA    L+APA A +V+GGDNGWEVS+ G VN FYT  D++   F     + SS ++ G LPAF +   KSP I G+ G+A+I+FAP      NK        N G      GA ID REV  N+SG FG +S GRTLSLF R +IL DMTLFG+G   G D  G    GR G GY YPDF  RF Y TP +NGF + +G++DP                G+   E  TP+ +SE SY+ AF GGSF AW   LWQ+   + S                G      G   I    GD+ +  +  G  I + GF  VG Y++ E LG L         W   + N  E   DG Y+QG+Y F+GKTKVG+S+G    D  +AAG         V+ +LWTVGVYHDV+SWL++IAEYN  E N+   G +  A +FSVG+F+ W
Sbjct:    9 LAAAIGTAALAGALSAPANAAIVLGGDNGWEVSYGGFVNLFYTQSDFE---FAGGGSEDSSHLNEGLLPAFHTLTAKSPEIGGLKGTAQITFAPDSSGAKNKRL------NKG------GAEIDMREVFFNVSGDFGTISAGRTLSLFQRQSILKDMTLFGMGALAGPDG-GGTGLGRIGFGYVYPDFRTRFTYKTPDINGFNLEVGIFDPQE--------------GASPSETDTPQFQSEASYTYAFEGGSFNAWFGLLWQEQEITSSPGIAAIPDSFVIDPVTGAVTGIPGTPAIPGATGDIESFGWNVGVDIKFGGFNVVGSYYDGEALGALLFALGGGDAWACSTTNCDEADNDGGYIQGSYTFNGKTKVGLSWGYSAQDD-NAAGAP------DVDNELWTVGVYHDVNSWLKVIAEYN--EHNSDFLGND--AESFSVGAFVLW 418          
BLAST of mRNA_P-wetherbeei_contig18279.1.1 vs. uniprot
Match: A0A6L8EHL5_9GAMM (Porin n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A6L8EHL5_9GAMM)

HSP 1 Score: 282 bits (722), Expect = 4.060e-88
Identity = 163/422 (38.63%), Postives = 231/422 (54.74%), Query Frame = 1
Query:   40 LAAPAGAVVVVGGDNGWEVSFDGNVNAFYTVGDYDEGYFTEAADKVSSRVHSGYLPAFFSFNVKSPTIEGMTGSARISFAPTIHNGGNKTQFASQSGNVGPVPGINGATIDTREVVANLSGAFGEVSFGRTLSLFGRNAILNDMTLFGVGFAPGADSFGSVTFGRTGHGYTYPDFAARFQYTTPVVNGFQIALGVYDPSNFSGVTAYGPAGSGLGSLLDENHTPRIESEVSYSTAFTGGSFKAWVDALWQDTGSSCSGTTLTAGGISANCGDMNTHAFGAGTKIGYMGFEFVGYYHENEGLGLTAQFNQNAVWFDGSG----NIRERKGDGFYLQGTYAFSGKTKVGVSYGEGNLDAIDAAGVAANGVGTHVERQLWTVGVYHDVSSWLRLIAEYNRGELNTHTAGKNPGANTFSVGSFLFW 1293
            L+ P  A VV+GG +GWEVS+ G +N FYT  D++   +   + + S+ ++ G LPAF +  V +P + G+ G  +I+FA  + +   K    ++SG  G      G+ ID REV  N+SG FG +S GRTL+LFGR AIL D+TLFG+G   G D  G    GR G+GY YPDF  RF Y TP +NGFQ+++G++DP               LG  + E  TP+ ++E ++++AF GGSF  W   +WQ+              I A+  D+ T  +  G ++   GF   G Y++ E LG       N    DG G      +E   +G+Y+Q +Y F+G TK+G  YGE   D  D  G+        V  +LWT+GVYHDV+SWL++IAEY   E  T   G    A+TFS+G FL W
Sbjct:   21 LSMPTNAAVVLGGADGWEVSYGGFINLFYTQSDFE---YAGGSSEDSAHLNEGLLPAFHTMTVNTPEVNGLKGMGQITFA--VDSSSEKASRLNKSGVAG-----TGSNIDMREVFFNVSGDFGTISVGRTLALFGRQAILKDITLFGMGAMAGPDG-GGTGLGRIGYGYVYPDFRTRFVYQTPDMNGFQLSVGIFDPQE------------PLGGNISETDTPQFQAEATFNSAFEGGSFSGWAGFIWQEQE------------IVASNSDVETVGWNIGAQVSAQGFSMTGSYYDGEALGSLLH---NIGGGDGFGCNDMGCKEADNEGYYVQASYTFNGATKIGGGYGESKQDGDDMYGIG------EVNNELWTIGVYHDVNSWLKVIAEYGNYESQT-IFGNLKDADTFSIGGFLLW 397          
BLAST of mRNA_P-wetherbeei_contig18279.1.1 vs. uniprot
Match: Q3J7Z2_NITOC (Porin_4 domain-containing protein n=3 Tax=Nitrosococcus oceani TaxID=1229 RepID=Q3J7Z2_NITOC)

HSP 1 Score: 264 bits (675), Expect = 1.660e-80
Identity = 177/449 (39.42%), Postives = 241/449 (53.67%), Query Frame = 1
Query:   19 AAAFGAGLAAPAGAVVVVGGDNGWEVSFDGNVNAFYTVGDYDE------GYFTEAADKVSSRVHSGYLPAFFSFNVKSPTIEGMTGSARISFAPTIHNGGNKTQFASQSGNVGPVPGIN----------GATIDTREVVANLSGAFGEVSFGRTLSLFGRNAILNDMTLFGVGFAPGADSFGSVTFGRTGHGYTYPDFAARFQYTTPVVNGFQIALGVYDPSNFSGVTAYGPAGSGLGSLLDENHTPRIESEVSYSTAFTGGSFKAWVDALWQDTGSSCSGTTLTAGGISANCGDMNTHAFGAGTKIGYMGFEFVGYYHENEGLGLTAQFNQNAVWFDGSGNIRERKGDGFYLQGTYAFSGKTKVGVSYGEGNLDAIDAAGVAANGVGTHV--------ERQLWTVGVYHDVSSWLRLIAEYNRGELNTHTAGKNPGANTFSVGSFLFW 1293
            AAA   GL+ PAGAVVVVGG+NGWEVSFDGN+N FY   D D       G     AD+ SSR  +G +PA FSFNVK+PT  G+    R+SFA   +N   K      +G  G   GI           G  ++ RE    + GAFG+V  GRTLSLF    IL D TLFGVG A G+   G  T GR G+GY YP+F ++ ++T+P + GF+++L   DPS   G  A   +G+   +   E ++PR E E+SY+  F  GS++ W   ++Q+      G     GG   +  D +   + AGT++ +MGFE  G Y++ EGLG +  F  +A   D +G  R+ KG  + +QG Y   G TKV  SYG    D          G G+ V        E+  + VG+YHDV++ L+L+AEY+R E   H  G+   AN   VG + FW
Sbjct:   12 AAAAAMGLSLPAGAVVVVGGENGWEVSFDGNINQFYVWTDPDARPGGVVGGNMNFADEKSSRFRTGLMPALFSFNVKAPTWNGLDIGGRVSFAGQTNNANTKNSDLGVNGGFGD-SGIGKVRSDSTSDFGGNLEFREAFFTVDGAFGQVLLGRTLSLFMGKNILTDQTLFGVG-ATGSVHGGGFTLGRIGYGYLYPNFNSQVRWTSPDMMGFKVSLAAVDPSKVCGEGAVFASGA---NCATETNSPRGEGEISYAGTFNNGSYQVWGSGMYQNVKRQSVG-----GGFGDD--DFSVWGWTAGTQVQFMGFEVNGSYYDGEGLGTS--FLMDADSLDATGQKRDNKG--WLVQGGYTILGHTKVAASYGRSEADETSNDRSCRTGGGSCVGAGGARLEEQNSYVVGIYHDVNANLKLVAEYSRVENEWH-GGQEQKANVVGVGGYFFW 443          
BLAST of mRNA_P-wetherbeei_contig18279.1.1 vs. uniprot
Match: D5C2T6_NITHN (Porin_4 domain-containing protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) TaxID=472759 RepID=D5C2T6_NITHN)

HSP 1 Score: 257 bits (657), Expect = 9.170e-78
Identity = 179/456 (39.25%), Postives = 243/456 (53.29%), Query Frame = 1
Query:   19 AAAFGAGLAAPAGAVVVVGGDNGWEVSFDGNVNAFYTVGDYDE------GYFTEAADKVSSRVHSGYLPAFFSFNVKSPTIEGMTGSARISFAPTIHNGGNK-----TQFASQSGNVGPVPGIN----GATIDTREVVANLSGAFGEVSFGRTLSLFGRNAILNDMTLFGVGFAPGADSFGSVTFGRTGHGYTYPDFAARFQYTTPVVNGFQIALGVYDPSNFSGV-----TAYG---PAGSGLGSLLDENHTPRIESEVSYSTAFTGGSFKAWVDALWQDTGSSCSGTTLTAGGISANCGDMNTHAFGAGTKIGYMGFEFVGYYHENEGLGLTAQFNQNAVWFDGSGNIRERKGDGFYLQGTYAFSGKTKVGVSYGEGNLDAID-------AAGVAANGVGTHVERQL-WTVGVYHDVSSWLRLIAEYNRGELNTHTAGKNPGANTFSVGSFLFW 1293
            AAA   GL+ PAGAVVVVGG+NGWEVSFDGN+N FY   D +       G    A ++ SSR  +G +PA FSFNVK+PT  G+   AR+SFA   +N   K     T+       +G V   +    G+ I+ RE    + G FG+V  GRTLSLF    IL D TLFGVG A G    G  T GR G+GY YP+F ++ ++T+P + GF+++L   DPS   G       A G   P  SG+ + + E  TPR E E+SY+  F  GS++ W   ++Q+  S   GT            D++   + AGT++ +MGFE  G Y++ EGLG +  F  +A   D +G  R+ KG  + +QG Y    +TKV  SYG    D            G      G  +E Q  + VGVYHDV++ L+L+AEY+R E   H  G+   AN   VG + FW
Sbjct:   12 AAAAAMGLSLPAGAVVVVGGENGWEVSFDGNINQFYVWTDPEARPNGVIGGNMNALEEDSSRFRTGLMPALFSFNVKAPTWNGLDMGARVSFAGQTNNANTKNSDLGTELGFGHQGIGKVRNDSTDDLGSNIEFREAFFTVDGTFGQVLLGRTLSLFMGKNILTDQTLFGVG-ATGDVHGGGFTLGRIGYGYLYPNFNSQIRWTSPDMMGFKVSLAGVDPSQICGEGFAVNPATGDVVPVASGV-NCVTETDTPRGEGEISYAGTFNNGSYQIWGSGMYQN--SELQGTG----------NDIDVWGWTAGTQVQFMGFELTGSYYDGEGLGTS--FLLDADSLDATGEKRDNKG--WLVQGGYTIMDRTKVAASYGRSEADETSNDSNCRTGNGPCVGASGARIEEQRSYVVGVYHDVNANLKLVAEYSRVENEWHD-GQEQEANVVGVGGYFFW 448          
BLAST of mRNA_P-wetherbeei_contig18279.1.1 vs. uniprot
Match: D8KAG6_NITWC (Porin_4 domain-containing protein n=1 Tax=Nitrosococcus watsoni (strain C-113) TaxID=105559 RepID=D8KAG6_NITWC)

HSP 1 Score: 257 bits (657), Expect = 9.960e-78
Identity = 177/464 (38.15%), Postives = 242/464 (52.16%), Query Frame = 1
Query:   19 AAAFGAGLAAPAGAVVVVGGDNGWEVSFDGNVNAFYTVGDYDE-----------GYFTE-------AADKVSSRVHSGYLPAFFSFNVKSPTIEGMTGSARISFAPTIHNGGNKTQFASQSGNVGPVPGIN----------GATIDTREVVANLSGAFGEVSFGRTLSLFGRNAILNDMTLFGVGFAPGADSFGSVTFGRTGHGYTYPDFAARFQYTTPVVNGFQIALGVYDPSNFSGVTAYGPAGSGLGSLLD---ENHTPRIESEVSYSTAFTGGSFKAWVDALWQDTGSSCSGTTLTAGGISANCGDMNTHAFGAGTKIGYMGFEFVGYYHENEGLGLTAQFNQNAVWFDGSGNIRERKGDGFYLQGTYAFSGKTKVGVSYGEGNLDAIDAAGVAANG-------VGTHVERQL-WTVGVYHDVSSWLRLIAEYNRGELNTHTAGKNPGANTFSVGSFLFW 1293
            AAA   GL+ PAGAVVVVGG+NGWEVSFDGN+N FY   D D              FT+       +  + SSR  +G +PA FSFNVK+PT  G+    R+SFA   +N   K      +G  G   GI           G  ++ RE    + GAFG+V  GRTLSLF    IL D TLFGVG A G+   G  T GR G+GY YP+F ++ ++T+P + GF+++L   DPS   G       G+GL   ++   E  +PR E EVSY+  F  GS++ W   +WQ+         +   G S+N  D N   + AG ++ +MGFE  G Y++ EGLG +  F  +A   D +G  R+ +G  +  QG Y   G TK+ VSYG    D      +   G        G  +E+Q  +  G+YHDV++ L+L+AEY+R E   H  G+   AN   VG + FW
Sbjct:   12 AAAAAMGLSLPAGAVVVVGGENGWEVSFDGNINQFYVWTDPDRRPDGVIGGNMPSSFTQDQNGNIRSTAEESSRFRTGLMPALFSFNVKAPTWNGLDIGGRVSFAGQTNNANTKNSDLGVNGGFGDT-GIGKIRSDSTSDLGGNLEFREAFFTVDGAFGQVLLGRTLSLFMGKNILTDQTLFGVG-ATGSVHGGGFTLGRIGYGYLYPNFNSQARWTSPDMMGFKVSLAAVDPSQVCG------EGAGLAGGVNCARETQSPRGEGEVSYAGTFNNGSYQVWGSGMWQN---------VRYSGNSSN--DFNVWGWTAGAQVQFMGFEVNGSYYDGEGLGTS--FLMDADSLDATGQKRDNRG--WLAQGGYTILGHTKLAVSYGISRADETSNDSICRTGGINCVGAAGARLEKQQSYVAGIYHDVNANLKLVAEYSRLENEWH-GGQKQEANVVGVGGYFFW 451          
BLAST of mRNA_P-wetherbeei_contig18279.1.1 vs. uniprot
Match: A0A2E2IJC4_9GAMM (Porin n=1 Tax=Methylophaga sp. TaxID=2024840 RepID=A0A2E2IJC4_9GAMM)

HSP 1 Score: 250 bits (638), Expect = 1.240e-75
Identity = 160/428 (37.38%), Postives = 227/428 (53.04%), Query Frame = 1
Query:   13 VGAAAFGAGLAAPAGAVVVVGGDNGWEVSFDGNVNAFYTVGDYDEGYFTEAADKVSSRVHSGYLPAFFSFNVKSPTIEGMTGSARISFAPTIHNGGNKTQFASQSGNVGPVPGINGATIDTREVVANLSGAFGEVSFGRTLSLFGRNAILNDMTLFGVG-FAPGADSFGSVTFGRTGHGYTYPDFAARFQYTTPVVNGFQIALGVYDPSNFSGVTAYGPAGSGLGSLLDENHTPRIESEVSYSTAFTGGSFKAWVDALWQDTGSSCSGTTLTAGGISANCGDMNTHAFGAGTKIGYMGFEFVGYYHENEGLGLTAQFNQNAVWFDGSGNIRERKGDGFYLQGTYAFSGKTKVGVSYGEGNLDAIDAAGVAANGVGTHVERQLWTVGVYHDVSSWLRLIAEYNRGELNTHTAGKNPGANTFSVGSFLFW 1293
            VGAAAF A  A  A A +VVGG+NG+E S DGN+N F+   D D           +SRV +G LP FF FNVK+P I G+T  AR+S +P+ + G    +            G NG+ ++ RE  A + GAFG+V  G+ L L+G + IL D TL+GVG    G    G  T GR G+GY Y D+ ++ ++T+  + GF++AL V D     G  A G A             PR E+++SY+T F GG FKAW+  + Q               I    GD+ ++A+  G  +G  GF+FV  Y++N+G+G        +       N +ER GDG+Y+Q  Y F+G T V  SYGE  LD   A            +R +WTVGVYHDV+S L+L+AEY++ E   H+ G+    +  ++G F+ W
Sbjct:   10 VGAAAFAA--AGAANATIVVGGENGYEFSVDGNINQFFVQSDAD---VAGGGSNDNSRVRNGLLPTFFGFNVKAPEINGLTVGARVSISPSTNGGSYFNE------------GQNGSAMEQREAFATVDGAFGQVMLGKGLGLYGSHNILLDQTLYGVGAVVAGNSDNGQTTLGRIGYGYDYADWRSQMRWTSVDMAGFKVALAVMDADEV-GTLAGGSA----------EKDPRYEADLSYATNFDGGMFKAWLSGMTQK--------------IDGAGGDIKSNAWTLGANLGLGGFDFVAAYYDNKGVGDLGGLAFGSAT---DANGKERDGDGYYVQAGYTFAGVTAVKASYGESTLDLTSAEKAGTIATYDIDKRSMWTVGVYHDVTSNLKLVAEYSQMEDEFHSGGELD-TDVLAIGGFISW 391          
BLAST of mRNA_P-wetherbeei_contig18279.1.1 vs. uniprot
Match: A0A4P7BYP6_9GAMM (Porin n=1 Tax=Nitrosococcus wardiae TaxID=1814290 RepID=A0A4P7BYP6_9GAMM)

HSP 1 Score: 252 bits (643), Expect = 1.580e-75
Identity = 182/475 (38.32%), Postives = 245/475 (51.58%), Query Frame = 1
Query:   19 AAAFGAGLAAPAGAVVVVGGDNGWEVSFDGNVNAFYTVGDYDE-------------GYFTEAADKV-----SSRVHSGYLPAFFSFNVKSPTIEGMTGSARISFAPTIHNGGNKTQFASQSGNVGPVPGIN----------GATIDTREVVANLSGAFGEVSFGRTLSLFGRNAILNDMTLFGVGFAPGADSFGSVTFGRTGHGYTYPDFAARFQYTTPVVNGFQIALGVYDPSNFSG-------VTA-YGPAGSGLGSLLDENHTPRIESEVSYSTAFTGGSFKAWVDALWQDTGSSCSGTTLTAGGISANCGDMNTHAFGAGTKIGYMGFEFVGYYHENEGLGLTAQFNQNAVWFDGSGNIRERKGDGFYLQGTYAFSGKTKVGVSYGEGNLDA-------------IDAAGVAANGVGTHVERQ-LWTVGVYHDVSSWLRLIAEYNRGELNTHTAGKNPGANTFSVGSFLFW 1293
            AAA   GL+ PAGAVVVVGG+NGWEVSFDGN+N FY   D +E              +  E    V     SSR  +G +PA FSFNVK+PT  G+   AR+SFA   +N   K         +G   GI           G+ I+ RE    + GAFG+V  GRTLSLF    IL D TLFGVG A G    G  T GR G+GY YP+F ++ ++++P + GF++AL   DPS   G       VT    P  SG+ +   E  TPR E E+SY+  F  GS++ W   +WQD     +GT + A G +A            GT+I +MGFE  G Y++ EGLG +  F  +A   D +G  R+ +G  + +QG Y    +TKV  SYG    D              I+ AG      G  +++Q  + VG+YHDV++ L+L+AEY+R E   H  G+   A+   VG + FW
Sbjct:   12 AAAAAMGLSLPAGAVVVVGGENGWEVSFDGNINQFYVYSDTEELPMGVIGGNISGNTFIDENGQLVRTGVESSRFRTGLMPALFSFNVKAPTWNGLDMGARVSFAGQTNNANTKNSDLGIENGIGH-QGIGKVRSDSTDDLGSNIEFREAFFTVDGAFGQVLLGRTLSLFMGKNILTDQTLFGVG-ATGDVHGGGFTLGRIGYGYLYPNFNSQIRWSSPDMMGFKVALAGVDPSQICGEGSVINPVTGNLIPVASGV-NCATETDTPRAEGEISYAGTFNNGSYQVWGAGMWQDAEFQ-NGTEVEAWGWTA------------GTQIQFMGFEVTGSYYDGEGLGTS--FLLDADSLDATGEKRDNRG--WLVQGGYTIMDRTKVAASYGRSEADETNNDELCRLRPNDINCAGAG----GARIDKQESYVVGIYHDVNANLKLVAEYSRVENEWHD-GQEQDADVVGVGGYFFW 461          
BLAST of mRNA_P-wetherbeei_contig18279.1.1 vs. uniprot
Match: A0A251X7A3_9GAMM (Porin_4 domain-containing protein n=1 Tax=Thioflexithrix psekupsensis TaxID=1570016 RepID=A0A251X7A3_9GAMM)

HSP 1 Score: 244 bits (624), Expect = 2.200e-73
Identity = 158/420 (37.62%), Postives = 219/420 (52.14%), Query Frame = 1
Query:   58 AVVVVGGDNGWEVSFDGNVNAFYTVGDYDEGYF-----TEAADKVSSRVHSGYLPAFFSFNVKSPTIEGMTGSARISFAPTIHNGGNKTQFASQSGNVGPVPGINGATIDTREVVANLSGAFGEVSFGRTLSLFGRNAILNDMTLFGVGFAPGADSFGSVTFGRTGHGYTYPDFAARFQYTTPVVNGFQIALGVYDPSNFSGVTAYGPAGSGLGSLLDENHTPRIESEVSYSTAFTGGSFKAWVDALWQDTGSSCSGTTLTAGGISANCG-DMNTHAFGAGTKIGYMGFEFVGYYHENEGLGLTAQFNQNAVWFDGSGNIRERKGDGFYLQGTYAFSGKTKVGVSYGEGNLDAIDAAGVAANGVGTH-VERQLW-TVGVYHDVSSWLRLIAEYNRGELNTHTAGKNPGANTFSVGSFLFW 1293
            AVV+VGGDNGWEVSFDGNVN+F  +   D         T + D+ S+RV +G LPA F+FNV+SP + G+ GSARI F P + N   K QF SQ              +D RE    + G FG+V  GR LSLF    +L DMTLFG+G   G D  G  T GR G+GY YP F A  +YTTP  +GF+++ G++DPS  +G  +             E   PR E+E+SY      G    WV A+ Q    +  G ++ + GI+     D++            MG  FV   +  +GLG T   + +++  D  G   ER   GF  Q TY   GKTK+G+SYGE +     A  +     G   +E+Q   T+G+YHDV++WL++ AEYN  +   + +G    +N   +G+F  W
Sbjct:   28 AVVLVGGDNGWEVSFDGNVNSFLVLERPDAKPDNVVGGTISGDQDSARVRTGLLPAVFAFNVRSPIVNGLRGSARIGFYPQVQNAKTKNQFGSQ--------------VDFREAFFKVEGEFGDVLMGRALSLFQGKNLLTDMTLFGLGVQGGVDG-GGTTLGRIGYGYVYPQFNAGIRYTTPDYSGFKLSAGIFDPSKIAGDVS-----------ATETDMPRFEAELSYGAPLGNGRILGWVSAMTQSADFATGGDSVRSSGIAGGISYDLD------------MGLGFVLSGYVGKGLGSTLMLDSDSL--DSVGE--ERDNHGFLAQATYTM-GKTKLGLSYGESDTKETRADQLVRLSTGARQIEKQSSVTLGLYHDVNAWLKIAAEYNYSKNEWYGSGGAQDSNALGLGAFFLW 404          
BLAST of mRNA_P-wetherbeei_contig18279.1.1 vs. uniprot
Match: M7NTP0_9GAMM (Outer membrane protein (Porin) n=1 Tax=Methylophaga lonarensis MPL TaxID=1286106 RepID=M7NTP0_9GAMM)

HSP 1 Score: 239 bits (610), Expect = 2.740e-71
Identity = 162/439 (36.90%), Postives = 229/439 (52.16%), Query Frame = 1
Query:   13 VGAAAFGAGLAAPAGAVVVVGGDNGWEVSFDGNVNAFYTV--GDYDEGYFTEAADKVSSRVHSGYLPAFFSFNVKSPTIEGMTGSARISFAPTIHNGGNKTQFASQSGNVGPVPGINGATIDTREVVANLSGAFGEVSFGRTLSLFGRNAILNDMTLFGVGFAPGADSFGSVTFGRTGHGYTYPDFAARFQYTTPVVNGFQIALGVYDPSNFSGVTAYGPAGSGLGSLLDENHTPRIESEVSYSTAFTGGSFKAWVDALWQDTGSSCSGTTLTAGGISANCGDMNTHAFGAGTKIGYMGFEFVGYYHENEGLGLTAQFNQNAVWFDGSGNIRERKGDGFYLQGTYAFSGKTKVGVSYGEGNLDAIDA--AGVAANGV--------GTHVERQLWTVGVYHDVSSWLRLIAEYNRGELNTHTAGKNPGANTFSVGSFLFW 1293
            VGAAA  A  A  A A +VVGG+NG+  S DGN+N FY    G  D   F E      SRV +G LP F  FNV +P + G+   AR+S +P+  NGG+                 NG+ ++ RE  A + G FG++  G+ L L+G + IL D TL+GVG   G D  G  T GR G+GY Y ++ ++ +YTTP ++GFQ A  V +      V   G           +   PR E ++SY TAF GGSFK WV           SG T    G  A+  ++ ++A+  G  + + GF+FV  Y++N+G+G     +  +       N + R G+G+Y+Q  Y F+G TKV  SYGE  L    A  AG+A            G   ER++ TVG+YHDV++ L+L+AEY+R E   H + K   A+ F+VG F+ W
Sbjct:   13 VGAAAMAA--AGAANATIVVGGENGYTFSVDGNINQFYVHQNGRKDLSGFRE------SRVRNGLLPTFLGFNVTAPEMNGLVVGARVSISPST-NGGSYFDGTQ-----------NGSAMEQREAFATVDGDFGQIMLGKGLGLYGSHNILMDQTLYGVGATLGGD--GQTTLGRIGYGYDYANWRSQIRYTTPNMSGFQAAFAVMESDRIGQVVTDGNI---------QKRQPRFEVDLSYGTAFDGGSFKGWV-----------SGMTQRVRGEYASSANVRSNAWTVGANVNFAGFDFVAAYYDNKGVGDLGGLDYASAT---DANGKRRDGEGYYVQAGYTFAGATKVSYSYGESELKRTSAEKAGLAPTSTSVALADLGGDIKERRMHTVGIYHDVTANLKLVAEYSRMEHRFHESDKQR-ADVFAVGGFISW 405          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18279.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1G0G5Z5_9GAMM5.820e-11647.77Porin_4 domain-containing protein n=1 Tax=Gammapro... [more]
A0A1G0K1H8_9GAMM1.220e-9242.35Porin_4 domain-containing protein n=1 Tax=Gammapro... [more]
A0A6L8EHL5_9GAMM4.060e-8838.63Porin n=1 Tax=Gammaproteobacteria bacterium TaxID=... [more]
Q3J7Z2_NITOC1.660e-8039.42Porin_4 domain-containing protein n=3 Tax=Nitrosoc... [more]
D5C2T6_NITHN9.170e-7839.25Porin_4 domain-containing protein n=1 Tax=Nitrosoc... [more]
D8KAG6_NITWC9.960e-7838.15Porin_4 domain-containing protein n=1 Tax=Nitrosoc... [more]
A0A2E2IJC4_9GAMM1.240e-7537.38Porin n=1 Tax=Methylophaga sp. TaxID=2024840 RepID... [more]
A0A4P7BYP6_9GAMM1.580e-7538.32Porin n=1 Tax=Nitrosococcus wardiae TaxID=1814290 ... [more]
A0A251X7A3_9GAMM2.200e-7337.62Porin_4 domain-containing protein n=1 Tax=Thioflex... [more]
M7NTP0_9GAMM2.740e-7136.90Outer membrane protein (Porin) n=1 Tax=Methylophag... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18279contigP-wetherbeei_contig18279:70..1365 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog323261.Noc_2601
PFAMsPorin_4
Model size1296
Max annot lvl135613|Chromatiales
Hectar predicted targeting categorysignal peptide
Exons1
Evalue2.72e-81
EggNOG OGsCOG3203@1|root,COG3203@2|Bacteria,1P7S0@1224|Proteobacteria,1S09X@1236|Gammaproteobacteria,1X0UP@135613|Chromatiales
DescriptionMembrane
Cds size1296
COG categoryM
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186141.5801644-CDS-P-wetherbeei_contig18279:69..13651683186141.5801644-CDS-P-wetherbeei_contig18279:69..1365Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig18279 70..1365 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18279.1.1prot_P-wetherbeei_contig18279.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig18279 70..1365 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig18279.1.1

>prot_P-wetherbeei_contig18279.1.1 ID=prot_P-wetherbeei_contig18279.1.1|Name=mRNA_P-wetherbeei_contig18279.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=432bp
IAAAVGAAAFGAGLAAPAGAVVVVGGDNGWEVSFDGNVNAFYTVGDYDEG
YFTEAADKVSSRVHSGYLPAFFSFNVKSPTIEGMTGSARISFAPTIHNGG
NKTQFASQSGNVGPVPGINGATIDTREVVANLSGAFGEVSFGRTLSLFGR
NAILNDMTLFGVGFAPGADSFGSVTFGRTGHGYTYPDFAARFQYTTPVVN
GFQIALGVYDPSNFSGVTAYGPAGSGLGSLLDENHTPRIESEVSYSTAFT
GGSFKAWVDALWQDTGSSCSGTTLTAGGISANCGDMNTHAFGAGTKIGYM
GFEFVGYYHENEGLGLTAQFNQNAVWFDGSGNIRERKGDGFYLQGTYAFS
GKTKVGVSYGEGNLDAIDAAGVAANGVGTHVERQLWTVGVYHDVSSWLRL
IAEYNRGELNTHTAGKNPGANTFSVGSFLFW*
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mRNA from alignment at P-wetherbeei_contig18279:70..1365-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig18279.1.1 ID=mRNA_P-wetherbeei_contig18279.1.1|Name=mRNA_P-wetherbeei_contig18279.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1296bp|location=Sequence derived from alignment at P-wetherbeei_contig18279:70..1365- (Phaeothamnion wetherbeei SAG_119_79)
ATTGCTGCGGCAGTCGGTGCAGCTGCGTTCGGCGCAGGTCTGGCCGCACC CGCCGGCGCGGTCGTGGTTGTCGGCGGCGACAACGGTTGGGAAGTAAGCT TTGACGGTAACGTCAACGCCTTCTACACGGTTGGCGACTACGACGAAGGC TACTTTACTGAAGCCGCCGACAAGGTCAGCAGCCGAGTTCACTCGGGCTA CCTGCCGGCCTTTTTCAGCTTCAACGTCAAGTCACCGACCATCGAAGGCA TGACCGGCAGTGCGCGCATCAGCTTCGCACCGACCATCCACAATGGTGGC AACAAGACCCAGTTCGCCTCGCAGTCGGGCAATGTCGGCCCGGTGCCAGG TATCAACGGTGCAACCATCGATACTCGTGAAGTTGTCGCCAATCTGAGCG GTGCTTTCGGCGAGGTGAGTTTCGGCCGCACGCTGTCACTGTTCGGTCGC AATGCGATCCTGAACGACATGACCCTGTTCGGTGTTGGCTTCGCGCCCGG CGCCGATTCCTTTGGCTCGGTGACTTTCGGTCGTACCGGCCATGGCTACA CCTATCCGGACTTCGCGGCCCGCTTCCAGTACACCACGCCGGTGGTCAAT GGGTTCCAGATTGCGCTCGGTGTGTATGACCCGTCGAATTTCAGCGGTGT GACAGCTTACGGCCCTGCCGGCAGCGGTCTCGGTAGCCTGCTCGACGAAA ACCATACGCCGCGCATAGAAAGTGAAGTGAGCTATTCGACGGCATTCACC GGCGGTAGCTTCAAGGCTTGGGTCGATGCCCTGTGGCAGGACACTGGCTC CAGTTGCTCGGGCACCACGCTCACGGCGGGCGGTATCTCAGCGAACTGCG GCGACATGAATACCCATGCCTTTGGCGCGGGTACCAAGATTGGCTACATG GGCTTTGAGTTCGTCGGTTACTACCACGAGAACGAAGGCCTGGGTCTCAC CGCGCAGTTCAATCAGAACGCTGTCTGGTTTGACGGTAGCGGCAATATCC GCGAGCGCAAGGGTGATGGCTTCTACCTGCAGGGCACCTACGCATTCAGC GGCAAGACCAAGGTCGGCGTGTCCTACGGCGAAGGCAATCTTGACGCCAT TGACGCCGCGGGTGTGGCGGCTAACGGCGTTGGTACCCACGTCGAACGTC AGCTCTGGACCGTCGGTGTTTATCATGATGTCAGCAGCTGGTTGCGCCTG ATTGCTGAATACAACCGTGGTGAGCTGAACACGCACACTGCGGGTAAGAA CCCCGGCGCCAATACCTTCAGCGTTGGCAGCTTCCTGTTCTGGTAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig18279:70..1365-

>mRNA_P-wetherbeei_contig18279.1.1 ID=mRNA_P-wetherbeei_contig18279.1.1|Name=mRNA_P-wetherbeei_contig18279.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1296bp|location=Sequence derived from alignment at P-wetherbeei_contig18279:70..1365- (Phaeothamnion wetherbeei SAG_119_79)
ATTGCTGCGGCAGTCGGTGCAGCTGCGTTCGGCGCAGGTCTGGCCGCACC
CGCCGGCGCGGTCGTGGTTGTCGGCGGCGACAACGGTTGGGAAGTAAGCT
TTGACGGTAACGTCAACGCCTTCTACACGGTTGGCGACTACGACGAAGGC
TACTTTACTGAAGCCGCCGACAAGGTCAGCAGCCGAGTTCACTCGGGCTA
CCTGCCGGCCTTTTTCAGCTTCAACGTCAAGTCACCGACCATCGAAGGCA
TGACCGGCAGTGCGCGCATCAGCTTCGCACCGACCATCCACAATGGTGGC
AACAAGACCCAGTTCGCCTCGCAGTCGGGCAATGTCGGCCCGGTGCCAGG
TATCAACGGTGCAACCATCGATACTCGTGAAGTTGTCGCCAATCTGAGCG
GTGCTTTCGGCGAGGTGAGTTTCGGCCGCACGCTGTCACTGTTCGGTCGC
AATGCGATCCTGAACGACATGACCCTGTTCGGTGTTGGCTTCGCGCCCGG
CGCCGATTCCTTTGGCTCGGTGACTTTCGGTCGTACCGGCCATGGCTACA
CCTATCCGGACTTCGCGGCCCGCTTCCAGTACACCACGCCGGTGGTCAAT
GGGTTCCAGATTGCGCTCGGTGTGTATGACCCGTCGAATTTCAGCGGTGT
GACAGCTTACGGCCCTGCCGGCAGCGGTCTCGGTAGCCTGCTCGACGAAA
ACCATACGCCGCGCATAGAAAGTGAAGTGAGCTATTCGACGGCATTCACC
GGCGGTAGCTTCAAGGCTTGGGTCGATGCCCTGTGGCAGGACACTGGCTC
CAGTTGCTCGGGCACCACGCTCACGGCGGGCGGTATCTCAGCGAACTGCG
GCGACATGAATACCCATGCCTTTGGCGCGGGTACCAAGATTGGCTACATG
GGCTTTGAGTTCGTCGGTTACTACCACGAGAACGAAGGCCTGGGTCTCAC
CGCGCAGTTCAATCAGAACGCTGTCTGGTTTGACGGTAGCGGCAATATCC
GCGAGCGCAAGGGTGATGGCTTCTACCTGCAGGGCACCTACGCATTCAGC
GGCAAGACCAAGGTCGGCGTGTCCTACGGCGAAGGCAATCTTGACGCCAT
TGACGCCGCGGGTGTGGCGGCTAACGGCGTTGGTACCCACGTCGAACGTC
AGCTCTGGACCGTCGGTGTTTATCATGATGTCAGCAGCTGGTTGCGCCTG
ATTGCTGAATACAACCGTGGTGAGCTGAACACGCACACTGCGGGTAAGAA
CCCCGGCGCCAATACCTTCAGCGTTGGCAGCTTCCTGTTCTGGTAA
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