mRNA_P-wetherbeei_contig1826.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1826.3.1 vs. uniprot
Match: D7FRV6_ECTSI (Complex1_LYR_dom domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRV6_ECTSI) HSP 1 Score: 83.2 bits (204), Expect = 1.310e-17 Identity = 40/84 (47.62%), Postives = 60/84 (71.43%), Query Frame = 2
Query: 200 MQAPTRSMAMGLYRSLRKTAKSMTDYNYREYSLRRSRLGFDQAKELEGADAMAAYVKGLQDLQMLKRQALIGSLYPHEQSVMES 451
M P+R+ +GLY+ LR+ + DYNYREY+LRR+R GF+ A+ +A AA+ KG ++L++++RQA I LYPH+ SVME+
Sbjct: 1 MAQPSRTAVLGLYKGLRRQGALLMDYNYREYALRRARRGFELARGFAPEEAEAAFKKGQRELEIVRRQAAISQLYPHQTSVMET 84
BLAST of mRNA_P-wetherbeei_contig1826.3.1 vs. uniprot
Match: A0A0G4IIG7_PLABS (Complex1_LYR_dom domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IIG7_PLABS) HSP 1 Score: 70.9 bits (172), Expect = 7.290e-13 Identity = 32/81 (39.51%), Postives = 54/81 (66.67%), Query Frame = 2
Query: 209 PTRSMAMGLYRSLRKTAKSMTDYNYREYSLRRSRLGFDQAKELEGADAMAAYVKGLQDLQMLKRQALIGSLYPHEQSVMES 451
PTRS + LY+++R+ D+N+REY +RR+R F+ + GADA Y KG++DLQ+++RQ+ + +Y H ++V E+
Sbjct: 6 PTRSACLALYKNVRRAGLQFKDFNFREYVVRRARERFEAGRAATGADAARLYEKGIEDLQVVRRQSTLNRMYAHGRNVAET 86
BLAST of mRNA_P-wetherbeei_contig1826.3.1 vs. uniprot
Match: A0A7S1G6K1_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G6K1_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 9.100e-12 Identity = 36/70 (51.43%), Postives = 48/70 (68.57%), Query Frame = 2
Query: 215 RSMAMGLYRSLRKTAKSMTDYNYREYSLRRSRLGFDQAKELEGADAMAAYVKGLQDLQMLKRQALIGSLY 424
RS A+ LYRS + AK DYN+REY+LRR+R GF++ + G A AA +G L++L+RQALI SLY
Sbjct: 7 RSQAISLYRSFVREAKGFKDYNFREYALRRARAGFEENRAASGDAAAAALAEGNAALEVLRRQALISSLY 76
BLAST of mRNA_P-wetherbeei_contig1826.3.1 vs. uniprot
Match: A0A0B6ZHZ5_9EUPU (Complex1_LYR_dom domain-containing protein (Fragment) n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B6ZHZ5_9EUPU) HSP 1 Score: 66.6 bits (161), Expect = 3.760e-11 Identity = 36/85 (42.35%), Postives = 55/85 (64.71%), Query Frame = 2
Query: 200 MQAPTRSMAMGLYRSLRKTAKSMTDYNYREYSLRRSRLGFDQAKELEGAD-AMAAYVKGLQDLQMLKRQALIGSLYPHEQSVMES 451
M APTRS + LY+ + K + +TDYN+R Y+LRR+ F + K + AD A + K ++L MLKRQ++IG L+ ++ V+ES
Sbjct: 5 MAAPTRSTILSLYKQMLKEGQKITDYNFRRYALRRTMDAFKENKTVTDADKCQALFKKAQENLDMLKRQSIIGQLFGSDKLVIES 89
BLAST of mRNA_P-wetherbeei_contig1826.3.1 vs. uniprot
Match: A0A6H5I7Q7_9HYME (Complex1_LYR_dom domain-containing protein n=2 Tax=Trichogramma TaxID=7490 RepID=A0A6H5I7Q7_9HYME) HSP 1 Score: 65.9 bits (159), Expect = 5.890e-11 Identity = 38/80 (47.50%), Postives = 52/80 (65.00%), Query Frame = 2
Query: 212 TRSMAMGLYRSLRKTAKSMTDYNYREYSLRRSRLGFDQAKELEGADAMAA-YVKGLQDLQMLKRQALIGSLYPHEQSVME 448
+R + + LYR L K +K YNYREY+LR+ R F Q K LE + + Y KGL+ L+MLKRQ LIG+LY ++ V+E
Sbjct: 3 SRKVVLNLYRDLLKESKKWASYNYREYALRKIRHEFRQNKALEDSTKINDFYNKGLESLEMLKRQVLIGNLYKTDKLVIE 82
BLAST of mRNA_P-wetherbeei_contig1826.3.1 vs. uniprot
Match: A0A0H5R7G6_9EUKA (Complex1_LYR_dom domain-containing protein (Fragment) n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5R7G6_9EUKA) HSP 1 Score: 65.5 bits (158), Expect = 1.270e-10 Identity = 30/73 (41.10%), Postives = 49/73 (67.12%), Query Frame = 2
Query: 206 APTRSMAMGLYRSLRKTAKSMTDYNYREYSLRRSRLGFDQAKELEGADAMAAYVKGLQDLQMLKRQALIGSLY 424
AP+RS + LYR L + + DYN+R YS+RR+R F ++E +++ Y+ GL++LQ+LKRQA + ++Y
Sbjct: 12 APSRSAVLCLYRQLMRAGNTFHDYNFRSYSVRRTRERFIASREASAEESLTLYISGLKELQVLKRQAALNNMY 84
BLAST of mRNA_P-wetherbeei_contig1826.3.1 vs. uniprot
Match: UPI00035A1C09 (LYR motif-containing protein 4 n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI00035A1C09) HSP 1 Score: 63.5 bits (153), Expect = 5.080e-10 Identity = 35/85 (41.18%), Postives = 55/85 (64.71%), Query Frame = 2
Query: 200 MQAPTRSMAMGLYRSLRKTAKSMTDYNYREYSLRRSRLGFDQAKELEGADAMAAYV-KGLQDLQMLKRQALIGSLYPHEQSVMES 451
M A TR+ + LY+ L K +K +TDYN+R Y+LRR+R F + K + A + A V K ++L+ML+RQA + L+ E+ ++ES
Sbjct: 1 MAASTRTKVLSLYKELLKESKRVTDYNFRNYALRRTRDAFKENKAITDAGQIQALVVKAQENLEMLRRQATVSQLFGSEKLIIES 85
BLAST of mRNA_P-wetherbeei_contig1826.3.1 vs. uniprot
Match: A0A6P3DAG8_BOMTE (LYR motif-containing protein 4 n=5 Tax=Bombus TaxID=28641 RepID=A0A6P3DAG8_BOMTE) HSP 1 Score: 63.2 bits (152), Expect = 7.490e-10 Identity = 34/87 (39.08%), Postives = 55/87 (63.22%), Query Frame = 2
Query: 200 MQAPTRSMAMGLYRSLRKTAKSMTDYNYREYSLRRSRLGFDQAKELEGADAM-AAYVKGLQDLQMLKRQALIGSLYPHEQSVMESTE 457
M A +R + + LYR+L + +K YNYR Y+LR+ R F+Q K ++ + + Y +GL+ LQ++KRQ IG+LY ++E+TE
Sbjct: 1 MMASSRKVILNLYRNLIRESKKWNSYNYRMYALRKIRHEFEQNKTIQDKEKINECYNRGLESLQIIKRQVTIGNLYSTRPLIIETTE 87
BLAST of mRNA_P-wetherbeei_contig1826.3.1 vs. uniprot
Match: UPI001B88CBDA (LYR motif-containing protein 4-like n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88CBDA) HSP 1 Score: 61.6 bits (148), Expect = 2.880e-9 Identity = 34/87 (39.08%), Postives = 53/87 (60.92%), Query Frame = 2
Query: 200 MQAPTRSMAMGLYRSLRKTAKSMTDYNYREYSLRRSRLGFDQAKELEGADAMAAYV-KGLQDLQMLKRQALIGSLYPHEQSVMESTE 457
M A TRS + LYR L + + TDYNYR Y+LRR+R F + K + + V + ++L+++KRQ +IG +Y H + ++ES E
Sbjct: 1 MAAATRSEVLSLYRLLLRAGRQFTDYNYRNYALRRARDAFHENKTVADKQKIQDLVNEAKKNLEIIKRQVIIGQMYGHGKLIIESQE 87
BLAST of mRNA_P-wetherbeei_contig1826.3.1 vs. uniprot
Match: A0A165K9D5_EXIGL (Complex1_LYR_dom domain-containing protein n=1 Tax=Exidia glandulosa HHB12029 TaxID=1314781 RepID=A0A165K9D5_EXIGL) HSP 1 Score: 61.2 bits (147), Expect = 4.670e-9 Identity = 34/97 (35.05%), Postives = 61/97 (62.89%), Query Frame = 2
Query: 200 MQAPTRSMAMGLYRSLRKTAKSMTDYNYREYSLRRSRLGFDQAKELEGADAMAA-YVKGLQDLQMLKRQALIGSLYPHEQSVMESTEYENSEPTEQG 487
M +P+R+ + LY S+ + ++S T YN+R+Y +RR+R F Q + A+ + A Y GL++L++L+R A++ SLY + V+E ++ E E+G
Sbjct: 1 MSSPSRTSILHLYGSMLRASRSFTSYNFRQYFIRRTRSTFRQLQNESDAERIKAFYDNGLRELEVLRRSAIVNSLYGGRRLVVERSDAEEKIELERG 97 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1826.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1826.3.1 >prot_P-wetherbeei_contig1826.3.1 ID=prot_P-wetherbeei_contig1826.3.1|Name=mRNA_P-wetherbeei_contig1826.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=99bp MQAPTRSMAMGLYRSLRKTAKSMTDYNYREYSLRRSRLGFDQAKELEGADback to top mRNA from alignment at P-wetherbeei_contig1826:5433..6162+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1826.3.1 ID=mRNA_P-wetherbeei_contig1826.3.1|Name=mRNA_P-wetherbeei_contig1826.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=730bp|location=Sequence derived from alignment at P-wetherbeei_contig1826:5433..6162+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1826:5433..6162+ >mRNA_P-wetherbeei_contig1826.3.1 ID=mRNA_P-wetherbeei_contig1826.3.1|Name=mRNA_P-wetherbeei_contig1826.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=297bp|location=Sequence derived from alignment at P-wetherbeei_contig1826:5433..6162+ (Phaeothamnion wetherbeei SAG_119_79)back to top |