mRNA_P-wetherbeei_contig18239.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig18239.1.1 vs. uniprot
Match: A0A835YIN4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIN4_9STRA) HSP 1 Score: 266 bits (679), Expect = 4.780e-81 Identity = 132/232 (56.90%), Postives = 164/232 (70.69%), Query Frame = 1
Query: 1 LGFRRGLRAPWDVALLDNFVYVSSAGGNQIWQLDSAGADMRPIAGSGRRGRRDCPVD-GYKLSDTTRFAQPSGIAGTLGRLVVCDADSSSLRSVDFRANAIGTALGGDTLFKENLSAFGDKDGFGASARLQHPTGLCTVGAGRLLCADTFNHKLKSITVTADESSSRPLAGDGVRGHRDGPAAAARFNCPGAAAAAPELGRAWVCDVGNNVVRVVDLTTGNVSTLSLTGAPP 693
LG++RGLRAPW V +LD+FVYV++AG +Q+W+L++ GA M P+AGSGR G RD P KLSD RFAQP GIA G L V DAD+S++R +DF N++ T GGD +F +NL +GD DG+G SAR Q+PTGL G GR+L ADT+NH++K + + ++R AG G RGHRDG AAARFN P AAAP+ GRAWV D GN VRVVDL T VSTL LTG PP
Sbjct: 497 LGYKRGLRAPWGVCILDSFVYVTAAGSDQVWRLNATGALMTPLAGSGRHGHRDNPGRFDAKLSDGVRFAQPMGIAAAAGALFVADADASAVRRIDFLDNSLSTQFGGDRVFPDNLFQYGDADGYGQSARFQYPTGLAAAGPGRVLLADTYNHRIKLLLTARADGAARAFAGSGERGHRDGVGAAARFNEPAGIAAAPDAGRAWVVDAGNAAVRVVDLETREVSTLRLTGVPP 728
BLAST of mRNA_P-wetherbeei_contig18239.1.1 vs. uniprot
Match: I2CRU4_NANGC (Nhl repeat containing 2 n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CRU4_NANGC) HSP 1 Score: 171 bits (432), Expect = 1.030e-48 Identity = 98/237 (41.35%), Postives = 135/237 (56.96%), Query Frame = 1
Query: 1 LGFRRGLRAPWDVALLDNFVYVSSAGGNQIWQLDSAGADMRPIAGSGRRGRRDCPVDGYK-LSDTTRFAQPSGIAGTLGRLVVCDADSSSLRSVDFRANA--IGTALGGDTLFKENLSAFGDKDGFGASARLQHPTGLCTVGAGRLLCADTFNHKLKSITVTADESSSRP--------LAGDGVRGHRDGPAAAARFNCPGAAAAAPELGRAWVCDVGNNVVRVVDLTTGNVSTLSL 678
LG RR R P +ALL++++YV++AG +QIW+ D D+ P+ G G R Y LS + FA P+GI G+L+V +A+SS++R +DFR + T LG D LF +LSAFGD DG+ S RLQ P L + A L ADT+NHK+K + + + P LAG G RG+RDG A A F+ P + G+A+VCD N+ +R VDL TG V TL +
Sbjct: 54 LGARRSFRWPVQLALLNDYLYVAAAGSHQIWRADPYTFDLSPLLGCGECAVRSRTDPNYSDLSSQSAFASPTGIVALPGKLLVSEAESSTIREIDFRQREAPLSTLLGNDRLFSRDLSAFGDADGYARSVRLQCPMALAGLSASSALLADTYNHKVKVLQAPSGSTPGDPAAAASVSRLAGSGKRGYRDGAGAEAEFDEPRGLCVDGKGGQAFVCDSNNHCIRTVDLRTGEVGTLKI 290
BLAST of mRNA_P-wetherbeei_contig18239.1.1 vs. uniprot
Match: A0A5J4Z158_PORPP (NHL repeat-containing protein 2 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z158_PORPP) HSP 1 Score: 177 bits (449), Expect = 6.900e-48 Identity = 98/231 (42.42%), Postives = 135/231 (58.44%), Query Frame = 1
Query: 25 APWDVALLDNFVYVSSAGGNQIWQLDSAGADMRPIAGSGRRGRRDCPVDGYKLSDT------TRFAQPSGIAGTLGRLVVCDADSSSLRSVDFRANAIGTALGGDTLFKENLSAFGDKDGFGASARLQHPTGLCTVGAGRLLCADTFNHKLKSITVTADESSSRPLAGDGVRGHRDGPAAAARFNCPGAAAAAPELGRAWVCDVGNNVVRVVDLTTGNVSTLSLTGAPPVD 699
+PWD+A +++S G NQ+W D D+R ++G P+ G L+DT RFA P+GI T + D DSS+LR +D R+ + T +GGD LF NLSAFGD+DGFG S RLQ+P G+ + RL ADT+N+K+K + +S R LAG G RG+RDG ARF+CP A ++ R +V D GN+ +RVVD+ TG+VSTL + P D
Sbjct: 501 SPWDIAYGQGTYFLTSPGSNQVWMFDPNTGDIRQLSGR--------PL-GPGLADTENDLTAARFAMPTGICVTKTHVFTVDCDSSTLRQIDVRSQTVSTKVGGDVLFPWNLSAFGDRDGFGPSVRLQYPLGIAVIDDDRLCIADTYNNKIK--LIMPKDSECRVLAGQGPRGNRDGAKEMARFDCPSGVAYDTKMQRLYVADRGNHAIRVVDVATGSVSTLRFSNFPLPD 720
BLAST of mRNA_P-wetherbeei_contig18239.1.1 vs. uniprot
Match: A0A7S3EIL8_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EIL8_9RHOD) HSP 1 Score: 172 bits (436), Expect = 2.930e-47 Identity = 94/221 (42.53%), Postives = 132/221 (59.73%), Query Frame = 1
Query: 28 PWDVALLDNFVYVSSAGGNQIWQLDSAGADMRPIAGSGRRGRRDCPVDGYKLSDTTRFAQPSGIAGTLGRLVVCDADSSSLRSVDFRANAIGTALGGDTLFKENLSAFGDKDGFGASARLQHPTGLCTVGAGRLLCADTFNHKLKSITVTADESSSRPLAGDGVRGHRDGPAAAARFNCPGAAAAAPELGRAWVCDVGNNVVRVVDLTTGNVSTLSLTGAP 690
PWDV++ VY+S AG N IW+LD G + +G GR D GY FA PSG+ T L V D+DSS++R + A+ T +GGD++F NLSAFGD+DGFG+ RLQ P G+C+ +LL AD++N+K++S+ E+ R +G G+ G+RDGP ARF CP + +L +A+V D N+ +RV+D TG+VSTL G P
Sbjct: 277 PWDVSVSSGNVYISLAGSNTIWRLDPFGDMIHFCGRTGVAGRVDVE-SGY---GGALFASPSGLCATQSSLFVVDSDSSTVREIGLGEKAVRTVVGGDSIFLGNLSAFGDRDGFGSGVRLQMPMGICSAPEDKLLVADSYNNKIRSVVPA--ENECREFSGTGITGYRDGPKEVARFFCPTDVVYSDKLKKAYVTDKNNHQIRVIDGVTGDVSTLRFFGFP 491
BLAST of mRNA_P-wetherbeei_contig18239.1.1 vs. uniprot
Match: A0A0G4H4R5_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4H4R5_VITBC) HSP 1 Score: 168 bits (426), Expect = 3.040e-44 Identity = 95/227 (41.85%), Postives = 126/227 (55.51%), Query Frame = 1
Query: 22 RAPWDVALLDNFVYVSSAGGNQIWQLDSAGADMRPIAGSGRRGRRDCPVDG---YKLSDTTRFAQPSGIAGTLG-RLVVCDADSSSLRSVDFRANAIGTALGGDTLFKENLSAFGDKDGFGASARLQHPTGLCTVGAGRLLCADTFNHKLKSITVTADESSSRPLAGDGVRGHRDGPAAAARFNCPGAAAAAPELGRAWVCDVGNNVVRVVDLTTGNVSTLSLTGAP 690
RAP V LDNFVYV+++G NQIW++D + + P G G++GR D G Y LSD RFAQP GIAGT+G L D++SSS+R V N++ TA GGD LF+ +LS GD G Q P+ L + + ADT NH++K ++ +AG G RG+ DGP A F+ P A R WVCD N+ +RV+DL V TL+L P
Sbjct: 830 RAPMGVTTLDNFVYVTASGSNQIWKVDPSTESLYPAFGGGKKGREDIWRGGEEEYHLSDKVRFAQPVGIAGTVGGELYAVDSESSSIRRVTLLDNSVSTAFGGDPLFRSDLSYLGDSTGLFGD--FQGPSFLSKIDTRQFYLADTLNHRIKKVSANFPSVGVSLVAGSGERGYADGPLREAMFDEPSGVACDLTTQRVWVCDSNNHALRVIDLRDKTVRTLTLKNVP 1054
BLAST of mRNA_P-wetherbeei_contig18239.1.1 vs. uniprot
Match: A0A2P6V3L6_9CHLO (NHL repeat-containing 2 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V3L6_9CHLO) HSP 1 Score: 156 bits (395), Expect = 4.730e-40 Identity = 97/231 (41.99%), Postives = 132/231 (57.14%), Query Frame = 1
Query: 19 LRAPWDVAL--LDNFVYVSSAGGNQIWQLDSAGADMRPIAGSG--RRGRRDCPVDGYKLSDTTRFAQPSGIAGTLG--RLVVCDADSSSLRSVDFRANAIGTALGGDTLFKENLSAFGDKDGFGASARLQHPTGLCTVGAGRLLCADTFNHKLKSITVTADESSSRPLAGDGVRGHRDGPAAAARFNCPGAAAAAPELGRAWVCDVGNNVVRVVDLTTGNVSTLSLTGAPP 693
L +PWDVAL D +VYV+ AG +QIW+ D+ +GSG R P+ TT +AQPSG+A G L V D++SS++R +D R +GGD LF +NL FGDKDG G+ A LQHP + T G++ AD++NH+LK + + S+ R LAG G G+ DG AAA+ + PG A P G V D N+++R D TGN+ TL+L G PP
Sbjct: 711 LNSPWDVALDSTDRYVYVAMAGQHQIWRHDTVTGVTENFSGSGYERNQNGATPL-------TTAWAQPSGLALAPGGDALYVADSESSTVRQLDLRTGGSQALVGGDPLFSDNLFRFGDKDGSGSDALLQHPLAVLTAPDGKVYVADSYNHRLKLLDPST--STLRTLAGSGGAGYADGAGAAAQLSEPGGLALGPN-GTVLVADTNNSLIRRFDPRTGNLFTLALAGVPP 931
BLAST of mRNA_P-wetherbeei_contig18239.1.1 vs. uniprot
Match: A0A2D8N141_9BACT (Thioredoxin domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D8N141_9BACT) HSP 1 Score: 146 bits (368), Expect = 1.220e-36 Identity = 87/231 (37.66%), Postives = 129/231 (55.84%), Query Frame = 1
Query: 4 GFRRGLRAPWDVALLDNFVYVSSAGGNQIWQLDSAGADMRPIAGSGRRGRRDCPVDGYKLSDTTRFAQPSGIAGTLGRLVVCDADSSSLRSVDFRANAIGTALGGDTLFKENLSAFGDKDGFGASARLQHPTGLCTVGA-GRLLCADTFNHKLKSITVTADESSSRPLAGDGVRGHRDGPAAAARFNCPGAAAAAPELGRAWVCDVGNNVVRVVDLTTGNVSTLSLTGAPP 693
G + L PWDVA+ + VY++ AG +QIW D + +G+GR ++ D L+ +AQPSG++ G+L + D++SS++RS+D ++ A T +GG+ NL AFGD DG G ARLQH G+ + A R+ ADT+NH+LK + + + G G G RDG A+F+ P A P G+ ++ D N+ +R+ DL T VSTL L G PP
Sbjct: 345 GAAQRLSTPWDVAVAGDKVYIAMAGTHQIWTYDKEKGILENFSGTGRE--QNSNSDDRLLA---AWAQPSGLSIGGGKLYIADSESSTVRSIDLKSGATSTLVGGEDAEPRNLFAFGDLDGIGQKARLQHDLGVLWLEATARVAVADTYNHRLKLLDPVKKQVTR--WIGSGKPGLRDGKGLEAQFSEPSGFALVPGGGKVFIADTNNHAIRIADLRTLEVSTLELEGVPP 568
BLAST of mRNA_P-wetherbeei_contig18239.1.1 vs. uniprot
Match: D8TQU4_VOLCA (Thioredoxin domain-containing protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TQU4_VOLCA) HSP 1 Score: 146 bits (368), Expect = 1.430e-36 Identity = 90/235 (38.30%), Postives = 132/235 (56.17%), Query Frame = 1
Query: 4 GFRRGLRAPWDVAL--LDNFVYVSSAGGNQIWQLDSAGADMRPIAGSGRRGRRDCPVDGYKLSDTTRFAQPSGI--AGT-LGRLVVCDADSSSLRSVDFRANAIGTALGGDTLFKENLSAFGDKDGFGASARLQHPTGLCTVGAGRLL-CADTFNHKLKSITVTADESSSRPLAGDGVRGHRDGPAAAARFNCPGAAAAAPELGRAWVCDVGNNVVRVVDLTTGNVSTLSLTGAP 690
G + L +PWDV L +++Y++ AG +QIW L+ + +G+G ++ P TT +AQPSG+ AG G + V D++SS++R +D + G +GGD LF +NL FGDKDGFGA A LQHP + + G + AD++NH++K++ +E + LAG G G RDG AA+F+ P P G + D N+ VR++D T VSTL LTG P
Sbjct: 369 GSAQPLNSPWDVELDARQDYLYIALAGQHQIWDLELSSGTAALFSGTGAERNQNGPTP-----FTTSWAQPSGLSLAGDGSGLMYVADSESSTIRVLDLGSGGSGLKVGGDPLFSDNLFRFGDKDGFGAEALLQHPLAVLSSADGSAIYVADSYNHRIKALNPNTNEIVT--LAGSGAAGFRDGVGTAAQFSEPAGLCRGPN-GTILIADTNNSAVRILDPKTQRVSTLGLTGVP 595
BLAST of mRNA_P-wetherbeei_contig18239.1.1 vs. uniprot
Match: A0A2G4JHR5_9BACT (Alkyl hydroperoxide reductase n=1 Tax=Acidobacterium sp. TaxID=1872119 RepID=A0A2G4JHR5_9BACT) HSP 1 Score: 143 bits (361), Expect = 2.210e-36 Identity = 89/229 (38.86%), Postives = 131/229 (57.21%), Query Frame = 1
Query: 10 RRGLRAPWDVALLDNFVYVSSAGGNQIWQLDSAGADMRPIAGSGRRGRRDCPVDGYKLSDTTRFAQPSGIAGTLGRLVVCDADSSSLRSVDFR-ANAIGTALGGDTLFKENLSAFGDKDGFGASARLQHPTGLCTVGAGRLLCADTFNHKLKSITVTADESSSRPLAGDGVRGHRDGPAAAARFNCPGAAAAAPELGRAWVCDVGNNVVRVVDLTTGNVSTLSLTGAPP 693
R L +PWD+A+ + ++ AG +QIW +D P AG+G R+D PV+ T FAQPSG+A L V DA+++ +R++D NA+ T GGD LFK FGD+DG G +ARLQHP G+ + AGR+ ADT+NHK+K + + ++ AG G GH DG A A+F PG + + + ++ D N+ +R +DL T V+TL++ G P
Sbjct: 291 RIDLNSPWDLAIKPGILIIAMAGPHQIWVVDLLHDRAYPYAGTGEEARKDGPVN------TATFAQPSGLALDGNTLYVADAEANIIRALDLPPGNAVTTIAGGD-LFK-----FGDEDGTGDAARLQHPLGVA-ISAGRVFIADTYNHKIKMLHPATRQVTT--FAGTGTAGHVDGAAKTAQFFEPGGLSVSGDT--LYIADTNNHAIRTIDLGTKLVATLTIEGLTP 502
BLAST of mRNA_P-wetherbeei_contig18239.1.1 vs. uniprot
Match: A0A835W9H3_9CHLO (Thioredoxin domain-containing protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835W9H3_9CHLO) HSP 1 Score: 145 bits (367), Expect = 2.300e-36 Identity = 94/239 (39.33%), Postives = 134/239 (56.07%), Query Frame = 1
Query: 4 GFRRGLRAPWDVAL--LDNFVYVSSAGGNQIWQLDSAGADMRPIAGSGRRGRRDCPVDGYKLSDTTRFAQPSGI--AGT-LGRLVVCDADSSSLRSVDFRANAIGTALGGDTLFKENLSAFGDKDGFGASARLQHPTG-LCTVGAGRLLCADTFNHKLKSITVTADESSSRPLAGDGVRGHRDGPAAAARFNCPGAAAAAPELGRAWVCDVGNNVVRVVDLTTGN---VSTLSLTGAPP 693
G + L +PWDVAL + ++Y++ AG +QIW L+ + +GSG ++ P TT +AQPSG+ AG G + V D++SS++R +D + G +GGD LF +NL FGDKDGFG A LQHP L + G + AD++NH++K + +E ++ LAG G G RDG AA F+ P A P G V D N +RV+D +G V+TL+LTG PP
Sbjct: 458 GSAQALNSPWDVALDAKEEYLYIALAGQHQIWDLELSSGLAGLFSGSGSERNQNGPTP-----FTTSWAQPSGLSLAGDGSGLMYVADSESSTVRVLDLSSGGSGLKVGGDPLFSDNLFRFGDKDGFGPEALLQHPLAVLSSEDGGVVYVADSYNHRIKVLNPNTNEITT--LAGSGQAGFRDGAGTAAAFSEPAGLARGPG-GTVLVADTNNGAIRVLDPASGRRRRVTTLALTGVPP 688 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18239.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig18239.1.1 >prot_P-wetherbeei_contig18239.1.1 ID=prot_P-wetherbeei_contig18239.1.1|Name=mRNA_P-wetherbeei_contig18239.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=235bp LGFRRGLRAPWDVALLDNFVYVSSAGGNQIWQLDSAGADMRPIAGSGRRGback to top mRNA from alignment at P-wetherbeei_contig18239:82..1001- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig18239.1.1 ID=mRNA_P-wetherbeei_contig18239.1.1|Name=mRNA_P-wetherbeei_contig18239.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=920bp|location=Sequence derived from alignment at P-wetherbeei_contig18239:82..1001- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig18239:82..1001- >mRNA_P-wetherbeei_contig18239.1.1 ID=mRNA_P-wetherbeei_contig18239.1.1|Name=mRNA_P-wetherbeei_contig18239.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=705bp|location=Sequence derived from alignment at P-wetherbeei_contig18239:82..1001- (Phaeothamnion wetherbeei SAG_119_79)back to top |