mRNA_P-wetherbeei_contig18238.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig18238.4.1 vs. uniprot
Match: A0A841HEB5_9GAMM (HipA_C domain-containing protein n=1 Tax=Povalibacter uvarum TaxID=732238 RepID=A0A841HEB5_9GAMM) HSP 1 Score: 343 bits (879), Expect = 3.240e-113 Identity = 165/279 (59.14%), Postives = 208/279 (74.55%), Query Frame = 1
Query: 1 LLGDVALDQYLAGLRQRSTVTSEERAVRYPQFVTEVLQGDLPGSSAHGEHPKFATLLQDQNVSTPVIVKFSPTLDTQVGQRWGDLLVAEHLAHAQLCAANVPACTSQIHTIANRRFLEVVRFDRSGREGRIGVSSLSAIDTGFYGRLDSWIESAARLHASGFITAETLEQIRLVATFGTLIANTDQHFGNLAFLDRYDGSFALAPIYDMLPMLFAPQHDQIVARTFDPPHPTANTLRAWGRARDMAERYWATLADNTLISEQFRAIAAACFRTLQETAR 837
+LGD ALDQYL R R + ER RYPQ T+VL+G LPGSSAHGEHPKF+TL++D + VIVKFSP + T VG+RW DLL+AEH+AH L A +PA S++ A+R +LEV RFDR G EGR GV+SL ++D YG++D+WI SA RL A G I+ TLEQ+RL ATFG LIANTD+HFGNLAF+DRYDG FALAPIYDMLPML+ P+HDQIV R F+PP PT +T++++GRAR++AERYW A ++ IS +F+AI+ AC L+ R
Sbjct: 168 ILGDAALDQYLGQQRHRLPIADAERLARYPQLATQVLEGGLPGSSAHGEHPKFSTLIEDASGPKHVIVKFSPIVTTAVGRRWSDLLIAEHIAHEVLGEAGLPAARSRMLQAADRTYLEVDRFDRHGPEGRTGVTSLLSVDASLYGKIDNWISSATRLRADGRISEGTLEQVRLAATFGELIANTDRHFGNLAFIDRYDGEFALAPIYDMLPMLYKPEHDQIVERVFEPPTPTTSTMQSYGRARELAERYWGRCARDSQISAEFQAISTACLGALRALPR 446
BLAST of mRNA_P-wetherbeei_contig18238.4.1 vs. uniprot
Match: A0A829YF01_9GAMM (Transcriptional regulator n=2 Tax=Steroidobacter agaridevorans TaxID=2695856 RepID=A0A829YF01_9GAMM) HSP 1 Score: 317 bits (811), Expect = 6.430e-103 Identity = 155/279 (55.56%), Postives = 197/279 (70.61%), Query Frame = 1
Query: 1 LLGDVALDQYLAGLRQRSTVTSEERAVRYPQFVTEVLQGDLPGSSAHGEHPKFATLLQDQNVSTPVIVKFSPTLDTQVGQRWGDLLVAEHLAHAQLCAANVPACTSQIHTIANRRFLEVVRFDRSGREGRIGVSSLSAIDTGFYGRLDSWIESAARLHASGFITAETLEQIRLVATFGTLIANTDQHFGNLAFLDRYDGSFALAPIYDMLPMLFAPQHDQIVARTFDPPHPTANTLRAWGRARDMAERYWATLADNTLISEQFRAIAAACFRTLQETAR 837
+LG+ AL +YLA + QR + + RA +P+ + + ++G LPGSSAHGEHPKFA + D V+VKFSP L +GQRW DLLVAEHLAH L + + AC SQIH + +L V RFDR G +GR+GV+SL AID YG+LD+WI +AARL I A TLEQ+RL+ATFG LI NTD+HFGNL+F D YDG+F L P YDMLPMLFAP+H+QI+ RTF+P HPTANT+ + RAR +AE+YW T+A +T ISE FR I+A C L+ R
Sbjct: 167 VLGEPALTEYLATIAQRQPIRN--RAQEFPKLLRDAIEGGLPGSSAHGEHPKFAAFVDDGRGPRHVLVKFSPPLTHPIGQRWSDLLVAEHLAHVVLASDGIAACRSQIHRFDDHTYLVVDRFDRLGNDGRLGVTSLFAIDLDHYGQLDNWIAAAARLLNDRMIDAATLEQVRLLATFGALIGNTDRHFGNLSFFDTYDGTFTLTPSYDMLPMLFAPEHNQIIGRTFEPAHPTANTMVCYARARRLAEQYWRTVASDTRISEDFRGISAQCLAALEALPR 443
BLAST of mRNA_P-wetherbeei_contig18238.4.1 vs. uniprot
Match: A0A534BB43_9GAMM (HipA_C domain-containing protein n=3 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A534BB43_9GAMM) HSP 1 Score: 314 bits (804), Expect = 3.870e-102 Identity = 156/279 (55.91%), Postives = 192/279 (68.82%), Query Frame = 1
Query: 1 LLGDVALDQYLAGLRQRSTVTSEERAVRYPQFVTEVLQGDLPGSSAHGEHPKFATLLQDQNVSTPVIVKFSPTLDTQVGQRWGDLLVAEHLAHAQLCAANVPACTSQIHTIANRRFLEVVRFDRSGREGRIGVSSLSAIDTGFYGRLDSWIESAARLHASGFITAETLEQIRLVATFGTLIANTDQHFGNLAFLDRYDGSFALAPIYDMLPMLFAPQHDQIVARTFDPPHPTANTLRAWGRARDMAERYWATLADNTLISEQFRAIAAACFRTLQETAR 837
+LG A D YLA R R+ + ++ER+ ++PQ V +V+ G LPGSSAHGEHPKFA ++QD + V+VKFSP++ T VGQRW DLL+AEH AH L AA + A S+I I +R +LEV RFDR G EGR+GVSSL AID YG LD+WI + RL I + LE+I+LV TFG LIANTD+HFGNLAF D Y G F LAP+YDMLPMLFAP+HDQI+A F PP PT++TL W RAR +AE YW L + I FR IA AC L+ R
Sbjct: 138 ILGSAAFDDYLALQRARNIIPADERSSQFPQLVDQVMAGGLPGSSAHGEHPKFAIVVQDPGGARHVLVKFSPSIGTAVGQRWSDLLIAEHQAHQVLRAAGIAAADSRIFRIDDRTYLEVDRFDRDGLEGRVGVSSLMAIDANLYGNLDNWIAAGQRLRTDRRIDDKALERIQLVTTFGALIANTDRHFGNLAFYDSYTGRFELAPVYDMLPMLFAPEHDQIIAHMFQPPGPTSDTLLMWPRARALAEGYWRALTGDPRIGADFREIAGACLLALEALPR 416
BLAST of mRNA_P-wetherbeei_contig18238.4.1 vs. uniprot
Match: UPI000E32101C (type II toxin-antitoxin system HipA family toxin YjjJ n=1 Tax=Steroidobacter cummioxidans TaxID=1803913 RepID=UPI000E32101C) HSP 1 Score: 313 bits (802), Expect = 1.260e-101 Identity = 151/279 (54.12%), Postives = 196/279 (70.25%), Query Frame = 1
Query: 1 LLGDVALDQYLAGLRQRSTVTSEERAVRYPQFVTEVLQGDLPGSSAHGEHPKFATLLQDQNVSTPVIVKFSPTLDTQVGQRWGDLLVAEHLAHAQLCAANVPACTSQIHTIANRRFLEVVRFDRSGREGRIGVSSLSAIDTGFYGRLDSWIESAARLHASGFITAETLEQIRLVATFGTLIANTDQHFGNLAFLDRYDGSFALAPIYDMLPMLFAPQHDQIVARTFDPPHPTANTLRAWGRARDMAERYWATLADNTLISEQFRAIAAACFRTLQETAR 837
+LGD AL YLA L QR + + RA+ +P+ + ++G LPGSSAHGEHPKFA ++D + ++KFSP L +GQRW DLLVAEH+AH L + + AC SQIH + +L V RFDR GR+GRIGV+SL AID YG+LD WI +A RL + I A TLE +RL+ATFG LI NTD+HFGNLAF D YDG+FAL P YDMLPMLFAP+H+QI+AR F+P PTA+T+ + RAR +AE+YW T+A +T +S+ FR ++A C L+ R
Sbjct: 167 VLGDAALTAYLAALAQRQPIRN--RALEFPKLLRVAIEGGLPGSSAHGEHPKFAAFVEDARGARHALIKFSPPLTNPIGQRWSDLLVAEHIAHVVLSSDGIDACRSQIHCFDDHTYLVVDRFDRIGRDGRIGVTSLFAIDLNHYGQLDHWIAAATRLLSDRMIDAATLEHVRLLATFGALIGNTDRHFGNLAFFDTYDGTFALTPSYDMLPMLFAPEHNQIIARRFEPAPPTADTMACYARARRLAEQYWRTIAGDTRVSDDFRRVSAECLAALEALPR 443
BLAST of mRNA_P-wetherbeei_contig18238.4.1 vs. uniprot
Match: UPI0019C2329B (Type II toxin-antitoxin system HipA family toxin YjjJ n=1 Tax=Steroidobacteraceae bacterium TaxID=2689616 RepID=UPI0019C2329B) HSP 1 Score: 310 bits (793), Expect = 3.550e-100 Identity = 160/281 (56.94%), Postives = 197/281 (70.11%), Query Frame = 1
Query: 1 LLGDVALDQYLAGLRQRST--VTSEERAVRYPQFVTEVLQGDLPGSSAHGEHPKFATLLQDQNVSTPVIVKFSPTLDTQVGQRWGDLLVAEHLAHAQLCAANVPACTSQIHTIANRRFLEVVRFDRSGREGRIGVSSLSAIDTGFYGRLDSWIESAARLHASGFITAETLEQIRLVATFGTLIANTDQHFGNLAFLDRYDGSFALAPIYDMLPMLFAPQHDQIVARTFDPPHPTANTLRAWGRARDMAERYWATLADNTLISEQFRAIAAACFRTLQETAR 837
+LGD AL+ +LA RQ +T + ER+ RYPQ +V+ G PGSSAHGEHPKF +L+ + V+VKFSP T+VGQRW DLL AEHLAH L A V A S+I + R FLEV RFDR GRIGV+SL AID+ YG+LD+WIE+A RL I A TLE +RL +TFG LIANTD+HFGNLAF DRYDG F+LAPIYDMLPML AP+HDQ++AR F PP P ++TLRA+GRAR++AE YW T A++ IS QFR+I L++ R
Sbjct: 168 ILGDAALNIHLASHRQDATRALDHAERSERYPQLANDVMTGGFPGSSAHGEHPKFTAVLKQADGFKHVLVKFSPLDSTEVGQRWSDLLTAEHLAHEVLKTAGVNAAESRILKCSGRTFLEVDRFDRKNIAGRIGVTSLFAIDSALYGKLDNWIEAATRLCRDSQIDAATLETVRLGSTFGALIANTDRHFGNLAFYDRYDGKFSLAPIYDMLPMLLAPEHDQVMARVFVPPDPASDTLRAYGRARELAELYWHTCAEDERISMQFRSICQTFLNALEKLPR 448
BLAST of mRNA_P-wetherbeei_contig18238.4.1 vs. uniprot
Match: A0A534D1W6_9GAMM (Type II toxin-antitoxin system HipA family toxin YjjJ n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A534D1W6_9GAMM) HSP 1 Score: 261 bits (666), Expect = 4.020e-81 Identity = 132/275 (48.00%), Postives = 167/275 (60.73%), Query Frame = 1
Query: 1 LLGDVALDQYLAGLRQRSTVTSEERAVRYPQFVTEVLQGDLPGSSAHGEHPKFATLLQDQNVSTPVIVKFSPTLDTQVGQRWGDLLVAEHLAHAQLCAANVPACTSQIHTIANRRFLEVVRFDRSGREGRIGVSSLSAIDTGFYGRLDSWIESAARLHASGFITAETLEQIRLVATFGTLIANTDQHFGNLAFLDRYDGSFALAPIYDMLPMLFAPQHDQIVARTFDPPHPTANTLRAWGRARDMAERYWATLADNTLISEQFRAIAAACFRTLQ 825
++G ALD+YLA + + R+ YPQ ++G GSSAHGE PKF + ++ T V+VKFSP + +G RW DLL+AEHLAH L A + AC S+I R FLE RFDR G EGR G SL A+DT YGRLD W SA RL A G ++ E E IRL+ FG LI NTD+HFGN+ D Y G LAP+YDMLPMLFAP +Q++ R F+P PTA L W RA +AERYW +A + I+ FR +A C +L+
Sbjct: 166 IVGTEALDRYLATANAPAPIDEGTRSRTYPQLANAAMEGRAGGSSAHGEQPKFTACVASADLRTHVLVKFSPPRNGPLGARWADLLIAEHLAHETLTAEGILACRSEILEAGERIFLETKRFDRIGAEGRRGAVSLFAVDTARYGRLDDWTSSAERLRADGLLSREDAEHIRLIDAFGALIGNTDRHFGNITLFDSYVGYLQLAPVYDMLPMLFAPADEQLIQRVFEPAPPTAAWLSIWPRAYAIAERYWNNVAQDARITAAFREQSARCLESLR 440
BLAST of mRNA_P-wetherbeei_contig18238.4.1 vs. uniprot
Match: A0A550J3Z1_9DELT (Type II toxin-antitoxin system HipA family toxin YjjJ n=2 Tax=Desulfuromonas acetexigens TaxID=38815 RepID=A0A550J3Z1_9DELT) HSP 1 Score: 233 bits (593), Expect = 6.090e-70 Identity = 125/278 (44.96%), Postives = 168/278 (60.43%), Query Frame = 1
Query: 1 LLGDVALDQYLAGLRQR-STVTSEERAVRYPQFVTEVLQGDLPGSSAHGEHPKFATLLQDQNVSTPVIVKFSPTLDTQVGQRWGDLLVAEHLAHAQLCAANVPACTSQIHTIANRRFLEVVRFDRSGREGRIGVSSLSAIDTGFYGRLDSWIESAARLHASGFITAETLEQIRLVATFGTLIANTDQHFGNLAFLDRYDGS-FALAPIYDMLPMLFAPQHDQIVARTFDPPHPTANTLRAWGRARDMAERYWATLADNTLISEQFRAIAAACFRTLQE 828
+LG+++L +Y R++ + V E RY F L GD PGSSA GE PKFA LL + V+VKFSPT DT G+RW DLL+ E LA +L + + A +++IH R FLEV RFDR GR GR+ + SL+A+D F+G LD+W +A RL SG ++AE + +RL + F TLIANTDQHFGN++ ++ F+LAP YD+LPML+ P ++ AR F P P A W AR A R+WAT A + IS FR I + +QE
Sbjct: 187 ILGELSLQRYFQSAREQPAPVLPPELPARYEAFARAALAGDPPGSSAGGEQPKFAALLAEGEEFRHVLVKFSPTTDTPSGRRWADLLICEQLALEELRSQGLRAASTRIHVTETRTFLEVTRFDRQGRFGRLPLVSLAAVDNEFFGHLDNWPAAAGRLEKSGMLSAEDADALRLFSAFSTLIANTDQHFGNISLVETDSKPRFSLAPAYDVLPMLYRPHQGEVPARAFAPGLPDAAVAGQWESARQAALRFWATAAADARISPDFREICSCNQGMIQE 464
BLAST of mRNA_P-wetherbeei_contig18238.4.1 vs. uniprot
Match: A0A661PNK2_9DELT (Type II toxin-antitoxin system HipA family toxinoxin YjjJ n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A661PNK2_9DELT) HSP 1 Score: 219 bits (559), Expect = 3.780e-65 Identity = 122/284 (42.96%), Postives = 169/284 (59.51%), Query Frame = 1
Query: 1 LLGDVALDQYLAGLRQRS-TVTSEERAVRYPQFVTEVLQGDLPGSSAHGEHPKFATLLQDQNVSTPVIVKFSPTLDTQVGQRWGDLLVAEHLAHAQLCAANVPACTSQIHTIANRRFLEVVRFDRSGREGRIGVSSLSAIDTGFYGRLDSWIESAARLHASGFITAETLEQIRLVATFGTLIANTDQHFGNLAFLDRYDGSFALAPIYDMLPMLFAPQHDQIVARTFDPPHPTANTLRAWGRARDMAERYWATLADNTLISEQFRAI---AAACFRTLQETARL 840
++GD +L +YL R+ V S ER YPQ ++GD GSSA GE PKFA +LQ+ ++ V+VKFSP +T G+RW DLLV EHLA + A + A T++I R FLEV RFDR GR GR+ + SL+AID F G LD W +A RL I+++ Q+R + +FG LIANTD HFGN++ + R + SF LAP YDMLPMLF P + + + F PP P + ++ W A + A +W A++ +S FR I ++A + +Q RL
Sbjct: 164 IIGDESLQRYLDASREEQLVVNSGERDSLYPQLAKAAIEGDPAGSSAGGEQPKFAVMLQN-GINQHVLVKFSPQTNTPEGERWADLLVCEHLAIETIREAGLRAPTTRIVETTERVFLEVSRFDRIGRNGRLPLVSLTAIDNEFLGHLDDWAATAGRLEERKMISSDDANQLRWLYSFGALIANTDMHFGNISLIYRRNKSFELAPAYDMLPMLFRPVNGTVPKKDFIPPGPKRDIMQQWDSALESALTFWQKAANDERLSNAFREICQESSAKLQAIQSGPRL 446
BLAST of mRNA_P-wetherbeei_contig18238.4.1 vs. uniprot
Match: A0A7V0WEW0_9BACT (Type II toxin-antitoxin system HipA family toxin YjjJ n=3 Tax=Bacteria TaxID=2 RepID=A0A7V0WEW0_9BACT) HSP 1 Score: 217 bits (552), Expect = 7.810e-64 Identity = 115/269 (42.75%), Postives = 166/269 (61.71%), Query Frame = 1
Query: 1 LLGDVALDQYLAGLRQR-STVTSEERAVRYPQFVTEVLQGDLPGSSAHGEHPKFATLLQDQNVSTPVIVKFSPTLDTQVGQRWGDLLVAEHLAHAQLCAANVPACTSQIHTIANRRFLEVVRFDRSGREGRIGVSSLSAIDTGFYGRLDSWIESAARLHASGFITAETLEQIRLVATFGTLIANTDQHFGNLAFLDRYDGS-FALAPIYDMLPMLFAPQHDQIVARTFDPPHPTAN-TLRAWGRARDMAERYWATLADNTLISEQFRAI 798
++G+ +L +YL RQ T+ ER YP+FV L+G+ GSSA GE PKFA L+++ + V+VKFSP + T G+RW DLL+ EH+A + + + S++ R LEV RFDR GR GR+ + SL ID+ F+GRLD WI +A+R +G ++ E + +R ++ FG+LIAN DQHFGN++ + + F+LAP YDMLPML+ PQ D++ ARTF+P T + L A + A R+W T A + I+E FR I
Sbjct: 182 IVGNESLGRYLEMARQPFETINVNERLTEYPRFVKSALEGNPAGSSAAGEQPKFAALVEENSELRHVLVKFSPMVTTPGGRRWADLLICEHIALNLIQGRGIDSANSRVLEAGGRYLLEVTRFDRQGRSGRLPMLSLFTIDSEFFGRLDDWISAASRFENNGMLSREDADNLRWLSVFGSLIANNDQHFGNISLITTDEKKRFSLAPAYDMLPMLYRPQEDEVPARTFEPKFGTVSQALALLPDAINWAVRFWDTAAGDHRITEDFREI 450
BLAST of mRNA_P-wetherbeei_contig18238.4.1 vs. uniprot
Match: A0A1W7QVP5_9DELT (Transcriptional regulator n=3 Tax=Geobacteraceae TaxID=213422 RepID=A0A1W7QVP5_9DELT) HSP 1 Score: 216 bits (549), Expect = 1.250e-63 Identity = 110/279 (39.43%), Postives = 165/279 (59.14%), Query Frame = 1
Query: 1 LLGDVALDQYLAGLRQ-RSTVTSEERAVRYPQFVTEVLQGDLPGSSAHGEHPKFATLLQDQNVSTPVIVKFSPTLDTQVGQRWGDLLVAEHLAHAQLCAANVPACTSQIHTIANRRFLEVVRFDRSGREGRIGVSSLSAIDTGFYGRLDSWIESAARLHASGFITAETLEQIRLVATFGTLIANTDQHFGNLAFLDRYDGSFALAPIYDMLPMLFAPQHDQIVARTFDPPHPTANTLRAWGRARDMAERYWATLADNTLISEQFRAIAAACFRTLQETA 834
++G+ +L++Y +R+ ++ + +E YP+ ++G PGSSA GEHPKF +++ + V+VKFSP LD+ G+RW DLLV EHLA + A + A + + NR FLEV RFDR+GR GR+ + SL A+D FYG D+W+++A R+ G + E +R ++ FG LIANTDQHFGN++ + G+F LAP+YDMLPML+ P ++ RTF PP A+ A A +W ++ IS +FR+I + L+ A
Sbjct: 167 VIGEESLERYFRSVREPQAPLGPDELPAAYPRMAHLAMEGQPPGSSAGGEHPKFTAIIERDGTARHVLVKFSPPLDSLEGRRWADLLVCEHLALEVVSEAGITAARTALLEAENRVFLEVERFDRTGRFGRLPMVSLRAVDNEFYGHQDNWVQAARRMEEQGQLPREDAASLRWLSVFGDLIANTDQHFGNVSLVPADKGTFRLAPVYDMLPMLYRPLDGVLLTRTFSPPAFAPGAPEAYASALAQALNFWERAGEDGRISVEFRSICRSNLEKLKALA 445 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18238.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig18238.4.1 >prot_P-wetherbeei_contig18238.4.1 ID=prot_P-wetherbeei_contig18238.4.1|Name=mRNA_P-wetherbeei_contig18238.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=289bp LLGDVALDQYLAGLRQRSTVTSEERAVRYPQFVTEVLQGDLPGSSAHGEHback to top mRNA from alignment at P-wetherbeei_contig18238:501..1367- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig18238.4.1 ID=mRNA_P-wetherbeei_contig18238.4.1|Name=mRNA_P-wetherbeei_contig18238.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=867bp|location=Sequence derived from alignment at P-wetherbeei_contig18238:501..1367- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig18238:501..1367- >mRNA_P-wetherbeei_contig18238.4.1 ID=mRNA_P-wetherbeei_contig18238.4.1|Name=mRNA_P-wetherbeei_contig18238.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=867bp|location=Sequence derived from alignment at P-wetherbeei_contig18238:501..1367- (Phaeothamnion wetherbeei SAG_119_79)back to top |