mRNA_P-wetherbeei_contig18227.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig18227.1.1 vs. uniprot
Match: A0A150GKS9_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GKS9_GONPE) HSP 1 Score: 87.8 bits (216), Expect = 4.190e-20 Identity = 40/86 (46.51%), Postives = 51/86 (59.30%), Query Frame = 1
Query: 10 CANAVRYGDPQCRHGGELYRFEGNASAPHHAESCAHCLCPAGWAGVDCRLCRDVAVCPPLHLSDGRTLAATNCSSGELAPTEEEAI 267
C A +Y DP C +GG L G + +SCAHC+CP+GWAGVDC C + CPP + DG L A C+SG + PT EEA+
Sbjct: 7 CRVATQY-DPICTNGGYLNALPGTDKS----DSCAHCICPSGWAGVDCSACTSASACPPQPMPDGSLLPAAECTSGSVVPTAEEAL 87
BLAST of mRNA_P-wetherbeei_contig18227.1.1 vs. uniprot
Match: A0A8J4D6N3_9CHLO (Uncharacterized protein (Fragment) n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4D6N3_9CHLO) HSP 1 Score: 86.7 bits (213), Expect = 3.450e-18 Identity = 42/89 (47.19%), Postives = 54/89 (60.67%), Query Frame = 1
Query: 10 CANAVRYGDPQCRHGG---ELYRFEGNASAPHHAESCAHCLCPAGWAGVDCRLCRDVAVCPPLHLSDGRTLAATNCSSGELAPTEEEAI 267
C A +Y DP C +GG LYR E ++SC HC+CP GWAGVDC C++V VCPP + DG L A C+S + PT+EEA+
Sbjct: 39 CRVATQY-DPICTNGGYLNALYRTE-------RSDSCGHCICPPGWAGVDCSACQEVQVCPPQPMPDGSMLPAAACTSESVVPTDEEAL 119
BLAST of mRNA_P-wetherbeei_contig18227.1.1 vs. uniprot
Match: A0A8J4AKR2_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4AKR2_9CHLO) HSP 1 Score: 84.3 bits (207), Expect = 4.520e-17 Identity = 41/89 (46.07%), Postives = 54/89 (60.67%), Query Frame = 1
Query: 10 CANAVRYGDPQCRHGG---ELYRFEGNASAPHHAESCAHCLCPAGWAGVDCRLCRDVAVCPPLHLSDGRTLAATNCSSGELAPTEEEAI 267
C A +Y DP C +GG LYR + ++SC HC+CP GWAGVDC C+ V VCPP + DG L A+ C+S + PT+EEA+
Sbjct: 39 CRVATQY-DPICTNGGYLNALYRTD-------RSDSCGHCICPPGWAGVDCSACQAVQVCPPQPMPDGSMLLASACTSESVVPTDEEAL 119
BLAST of mRNA_P-wetherbeei_contig18227.1.1 vs. uniprot
Match: D8TRH3_VOLCA (Uncharacterized protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TRH3_VOLCA) HSP 1 Score: 80.9 bits (198), Expect = 7.470e-16 Identity = 40/89 (44.94%), Postives = 50/89 (56.18%), Query Frame = 1
Query: 10 CANAVRYGDPQCRHGG---ELYRFEGNASAPHHAESCAHCLCPAGWAGVDCRLCRDVAVCPPLHLSDGRTLAATNCSSGELAPTEEEAI 267
C A +Y DP C +GG LYR + SC HC+CP GWAGVDC C+ VCPP + DG L A C+S + PT+EEA+
Sbjct: 39 CRVATQY-DPICTNGGYLNALYRTP-------DSNSCGHCICPPGWAGVDCSACQTAEVCPPQPMPDGSMLPAAACTSDSVVPTDEEAL 119
BLAST of mRNA_P-wetherbeei_contig18227.1.1 vs. uniprot
Match: A0A7S3VT85_DUNTE (Hypothetical protein (Fragment) n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3VT85_DUNTE) HSP 1 Score: 79.7 bits (195), Expect = 1.830e-15 Identity = 38/86 (44.19%), Postives = 48/86 (55.81%), Query Frame = 1
Query: 10 CANAVRYGDPQCRHGGELYRFEGNASAPHHAESCAHCLCPAGWAGVDCRLCRDVAVCPPLHLSDGRTLAATNCSSGELAPTEEEAI 267
C A+ DP C++GG L R E + P SC C+CP W G DC LC CPP L DGR+L A+ C+SG +AP EE +
Sbjct: 43 CRKAIEVQDPVCKNGGYL-RAENVTAEP---TSCGDCICPPNWDGGDCGLCTSAEHCPPKQLPDGRSLPASQCTSGSIAPIPEEKL 124
BLAST of mRNA_P-wetherbeei_contig18227.1.1 vs. uniprot
Match: A0A250XNY5_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XNY5_9CHLO) HSP 1 Score: 67.8 bits (164), Expect = 2.980e-11 Identity = 37/87 (42.53%), Postives = 47/87 (54.02%), Query Frame = 1
Query: 10 CANAVRYGDPQCRHGGELYRFEGNASAPHHAESCAHCLCPAGWAGVDCRLCRDVAVCPPLHLSDGRTLA-ATNCSSGELAPTEEEAI 267
C V DP C++GG Y N + H+ CA C+CP GW G+DC LC+ CPP S G++ AT C S + PTEEE I
Sbjct: 38 CRVQVAAQDPVCKNGG--YLRADNETNDHNI--CADCICPEGWGGLDCGLCKTKDSCPPRSGSAGQSSKYATQCISDSIMPTEEERI 120
BLAST of mRNA_P-wetherbeei_contig18227.1.1 vs. uniprot
Match: A0A7R9V640_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9V640_9CHLO) HSP 1 Score: 58.5 bits (140), Expect = 1.160e-8 Identity = 33/88 (37.50%), Postives = 41/88 (46.59%), Query Frame = 1
Query: 10 CANAVRYGDPQCRHGGELYRFEGNASAPHHAESCAHCLCPAGWAGVDCRLCRDVAVCP----PLHLSDGRTLAATNCSSGELAPTEEE 261
C A DP C++GG L R + N P SC C+CP GW GV C LC+ CP P + AT C+S + PT E
Sbjct: 52 CRVAYEVQDPVCQNGGYL-RADNNTGDPW---SCGECVCPDGWDGVTCGLCKSKETCPLGTAPGAPPGSPAVPATGCTSDTIVPTATE 135 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18227.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig18227.1.1 >prot_P-wetherbeei_contig18227.1.1 ID=prot_P-wetherbeei_contig18227.1.1|Name=mRNA_P-wetherbeei_contig18227.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=89bp MPDCANAVRYGDPQCRHGGELYRFEGNASAPHHAESCAHCLCPAGWAGVDback to top mRNA from alignment at P-wetherbeei_contig18227:1018..1284+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig18227.1.1 ID=mRNA_P-wetherbeei_contig18227.1.1|Name=mRNA_P-wetherbeei_contig18227.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=267bp|location=Sequence derived from alignment at P-wetherbeei_contig18227:1018..1284+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig18227:1018..1284+ >mRNA_P-wetherbeei_contig18227.1.1 ID=mRNA_P-wetherbeei_contig18227.1.1|Name=mRNA_P-wetherbeei_contig18227.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=267bp|location=Sequence derived from alignment at P-wetherbeei_contig18227:1018..1284+ (Phaeothamnion wetherbeei SAG_119_79)back to top |