mRNA_P-wetherbeei_contig18218.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig18218.1.1
Unique NamemRNA_P-wetherbeei_contig18218.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig18218.1.1 vs. uniprot
Match: A0A351T7K4_9PROT (Antibiotic biosynthesis monooxygenase n=3 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A351T7K4_9PROT)

HSP 1 Score: 112 bits (280), Expect = 5.600e-30
Identity = 52/104 (50.00%), Postives = 72/104 (69.23%), Query Frame = 1
Query:   31 KQEAHMLVISGEIRVAPESRIKAVAAMTRVEQATRKEEGCLTYTFYADLEDANTFRIFEEWESDAALAAHFKAPHIAAFRAEMTEVKVLSRQIKRYEVTSVAVL 342
            ++E  MLVISG  R+APE R +A A    + +A+R E+GC  Y+FYAD+ED N  RIFEEW SD ALAAHF+ PH+  F+  M ++K+LSR + +YE+   + L
Sbjct:    2 EREGEMLVISGIFRIAPECRDRAFALARDMARASRAEDGCHAYSFYADIEDENVLRIFEEWVSDEALAAHFRTPHMKTFQTGMADLKILSRDVTKYEIAQASAL 105          
BLAST of mRNA_P-wetherbeei_contig18218.1.1 vs. uniprot
Match: A0A2E9Y5X0_9PROT (Antibiotic biosynthesis monooxygenase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E9Y5X0_9PROT)

HSP 1 Score: 102 bits (254), Expect = 4.200e-26
Identity = 51/99 (51.52%), Postives = 66/99 (66.67%), Query Frame = 1
Query:   46 MLVISGEIRVAPESRIKAVAAMTRVEQATRKEEGCLTYTFYADLEDANTFRIFEEWESDAALAAHFKAPHIAAFRAEMTEVKVLSRQIKRYEVTSVAVL 342
            M++ISG  R APE+R  A+AA   +   TRKE GC+TY F+AD+ED NTFRIFEEW+S A L AHF+  HIA FR  +  +  L R + RY V  ++ L
Sbjct:    1 MILISGCFRFAPENRAAALAAALAMAAETRKEAGCITYGFFADVEDENTFRIFEEWQSQAHLDAHFRTAHIAQFRETVGALDPLERDVSRYVVAEISKL 99          
BLAST of mRNA_P-wetherbeei_contig18218.1.1 vs. uniprot
Match: A0A192IHR3_9HYPH (ABM domain-containing protein n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A192IHR3_9HYPH)

HSP 1 Score: 99.8 bits (247), Expect = 6.630e-25
Identity = 50/105 (47.62%), Postives = 69/105 (65.71%), Query Frame = 1
Query:   13 LWKKHQKQEAHMLVISGEIRVAPESRIKAVAAMTRVEQATRKEEGCLTYTFYADLEDANTFRIFEEWESDAALAAHFKAPHIAAFRAEMTEVKVLSRQIKRYEVT 327
            L +KHQ     M+V+SG   +   S   A AAM  + + TR E+GC+TY F+  +E   TFR+FEEWESD AL AHF APH+  FRA++  +++LSR +KRY V+
Sbjct:    2 LSRKHQGGSI-MIVVSGTFELGHASVETARAAMAEMAEDTRGEKGCITYAFFQSIESPTTFRVFEEWESDDALKAHFDAPHMKEFRAKLGSLEILSRDVKRYVVS 105          
BLAST of mRNA_P-wetherbeei_contig18218.1.1 vs. uniprot
Match: A0A3A0G3A7_9PROT (Antibiotic biosynthesis monooxygenase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A3A0G3A7_9PROT)

HSP 1 Score: 97.8 bits (242), Expect = 2.870e-24
Identity = 51/96 (53.12%), Postives = 65/96 (67.71%), Query Frame = 1
Query:   46 MLVISGEIRVAPESRIKAVAAMTRVEQATRKEEGCLTYTFYADLEDANTFRIFEEWESDAALAAHFKAPHIAAFRAEMTEVKVLSRQIKRYEVTSV 333
            M+V++GEI + P  R  AVAA  R+ +ATR E GC++Y F ADL +   FRIFEEWES  AL AHF APH+AAF+  +    V    I+RYEV+SV
Sbjct:    1 MIVVAGEIDIDPAHRDGAVAAAVRMMEATRGEPGCISYAFSADLAEPGRFRIFEEWESQQALDAHFAAPHMAAFQRAVAGFGVRRIAIQRYEVSSV 96          
BLAST of mRNA_P-wetherbeei_contig18218.1.1 vs. uniprot
Match: A0A534RSK7_9DELT (Antibiotic biosynthesis monooxygenase n=2 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534RSK7_9DELT)

HSP 1 Score: 97.8 bits (242), Expect = 6.110e-24
Identity = 51/113 (45.13%), Postives = 69/113 (61.06%), Query Frame = 1
Query:   16 WKKHQKQ--------EAHMLVISGEIRVAPESRIKAVAAMTRVEQATRKEEGCLTYTFYADLEDANTFRIFEEWESDAALAAHFKAPHIAAFRAEMTEVKVLSRQIKRYEVTS 330
            W +H++Q        EA M+VI+G +   PE R +A+     +  ATR E GC+TY F ADL+D NT  IFEEWES+ ALA HF++PH+AAFR  +  +      +KRY V S
Sbjct:   11 WCQHRRQDGPRGRPGEASMIVIAGSVAARPERREEAIRVARTMAAATRAEAGCVTYRFSADLDDPNTLLIFEEWESEEALARHFQSPHMAAFRQALPGLLAGVPALKRYGVAS 123          
BLAST of mRNA_P-wetherbeei_contig18218.1.1 vs. uniprot
Match: UPI0019CD4854 (Antibiotic biosynthesis monooxygenase n=1 Tax=Cytophagales bacterium TaxID=2053541 RepID=UPI0019CD4854)

HSP 1 Score: 92.8 bits (229), Expect = 2.620e-22
Identity = 46/94 (48.94%), Postives = 59/94 (62.77%), Query Frame = 1
Query:   46 MLVISGEIRVAPESRIKAVAAMTRVEQATRKEEGCLTYTFYADLEDANTFRIFEEWESDAALAAHFKAPHIAAFRAEMTEVKVLSRQIKRYEVT 327
            ML+++G I V PE+   AV AM+ V   TRKE GC++YTF  D  D   F +FEEWES   L+AHF+APHIAAFR    E      ++K Y V+
Sbjct:    1 MLIVAGLIHVKPEAHAVAVEAMSEVMAETRKEAGCISYTFSPDFTDPGLFHLFEEWESQEQLSAHFEAPHIAAFRRRQPEFVARPGEVKIYIVS 94          
BLAST of mRNA_P-wetherbeei_contig18218.1.1 vs. uniprot
Match: A0A6I2YLH1_9ACTN (Antibiotic biosynthesis monooxygenase n=2 Tax=root TaxID=1 RepID=A0A6I2YLH1_9ACTN)

HSP 1 Score: 91.3 bits (225), Expect = 1.090e-21
Identity = 43/95 (45.26%), Postives = 65/95 (68.42%), Query Frame = 1
Query:   46 MLVISGEIRVAPESRIKAVAAMTRVEQATRKEEGCLTYTFYADLEDANTFRIFEEWESDAALAAHFKAPHIAAFRAEMTEVKVLSRQIKRYEVTS 330
            M+VI G I + P  R +A++AM+ +  A+  E GC+TY F  D+ + +T  +FEEWES+AALAAHF APH+A F++++ +V      + RYEV+S
Sbjct:    1 MIVIRGSIPINPTMRDRAISAMSEMSIASEAEAGCVTYRFSFDIREPDTVLLFEEWESEAALAAHFSAPHMATFQSDLKDVVQGEPSVLRYEVSS 95          
BLAST of mRNA_P-wetherbeei_contig18218.1.1 vs. uniprot
Match: A0A6V6ZMX5_9RHOB (ABM domain-containing protein n=2 Tax=Ruegeria TaxID=97050 RepID=A0A6V6ZMX5_9RHOB)

HSP 1 Score: 88.2 bits (217), Expect = 1.780e-20
Identity = 47/90 (52.22%), Postives = 58/90 (64.44%), Query Frame = 1
Query:   46 MLVISGEIRVAPESRIKAVAAMTRVEQATRKEEGCLTYTFYADLEDANTFRIFEEWESDAALAAHFKAPHIAAFRAEMTEVKVLSRQIKR 315
            MLV++G + V+PE   KA  A   +   T KEEGC+TY F   L  +N FR++EEWES AAL AHF APH+AAFRA + E  V S  I R
Sbjct:    1 MLVVTGIVEVSPEGIEKAEKAALEMVGETVKEEGCITYEFSQVLGHSNRFRVYEEWESQAALEAHFAAPHMAAFRAALGEAGVKSSDICR 90          
BLAST of mRNA_P-wetherbeei_contig18218.1.1 vs. uniprot
Match: A0A0L1JMD2_9RHOB (ABM domain-containing protein n=1 Tax=Pseudaestuariivita atlantica TaxID=1317121 RepID=A0A0L1JMD2_9RHOB)

HSP 1 Score: 87.8 bits (216), Expect = 2.810e-20
Identity = 42/93 (45.16%), Postives = 62/93 (66.67%), Query Frame = 1
Query:   46 MLVISGEIRVAPESRIKAVAAMTRVEQATRKE-EGCLTYTFYADLEDANTFRIFEEWESDAALAAHFKAPHIAAFRAEMTEVKVLSRQIKRYE 321
            +LV++G I VAPE       A  R  +ATR + EGCL Y FY D+E   TFR++EEW  + ALAAH +APH+  FR  +++V++L R+I +++
Sbjct:    3 VLVVTGVIEVAPEDAETFRVAAARAAKATRSDDEGCLLYAFYEDVEKPGTFRVYEEWRDEEALAAHARAPHMDTFRNALSDVEILRREIGKHD 95          
BLAST of mRNA_P-wetherbeei_contig18218.1.1 vs. uniprot
Match: A0A534REG0_9DELT (Antibiotic biosynthesis monooxygenase n=2 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534REG0_9DELT)

HSP 1 Score: 87.8 bits (216), Expect = 4.110e-20
Identity = 41/75 (54.67%), Postives = 53/75 (70.67%), Query Frame = 1
Query:   46 MLVISGEIRVAPESRIKAVAAMTRVEQATRKEEGCLTYTFYADLEDANTFRIFEEWESDAALAAHFKAPHIAAFR 270
            M+VI+G +   PE R +A+     +  ATR E GC+TY F ADL+D NT  IFEEWES+ ALA HF++PH+AAFR
Sbjct:    1 MIVIAGSVAARPERREEAIRVARTMAAATRAEAGCVTYRFSADLDDPNTLLIFEEWESEEALARHFQSPHMAAFR 75          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18218.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A351T7K4_9PROT5.600e-3050.00Antibiotic biosynthesis monooxygenase n=3 Tax=Alph... [more]
A0A2E9Y5X0_9PROT4.200e-2651.52Antibiotic biosynthesis monooxygenase n=1 Tax=Rhod... [more]
A0A192IHR3_9HYPH6.630e-2547.62ABM domain-containing protein n=3 Tax=Alphaproteob... [more]
A0A3A0G3A7_9PROT2.870e-2453.13Antibiotic biosynthesis monooxygenase n=1 Tax=Prot... [more]
A0A534RSK7_9DELT6.110e-2445.13Antibiotic biosynthesis monooxygenase n=2 Tax=Delt... [more]
UPI0019CD48542.620e-2248.94Antibiotic biosynthesis monooxygenase n=1 Tax=Cyto... [more]
A0A6I2YLH1_9ACTN1.090e-2145.26Antibiotic biosynthesis monooxygenase n=2 Tax=root... [more]
A0A6V6ZMX5_9RHOB1.780e-2052.22ABM domain-containing protein n=2 Tax=Ruegeria Tax... [more]
A0A0L1JMD2_9RHOB2.810e-2045.16ABM domain-containing protein n=1 Tax=Pseudaestuar... [more]
A0A534REG0_9DELT4.110e-2054.67Antibiotic biosynthesis monooxygenase n=2 Tax=Delt... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18218contigP-wetherbeei_contig18218:140..484 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog985054.JQEZ01000005_gene257
PFAMsABM
Model size345
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue6.73e-20
EggNOG OGsCOG1359@1|root,COG1359@2|Bacteria,1NA1J@1224|Proteobacteria,2VCWG@28211|Alphaproteobacteria,4NDFT@97050|Ruegeria
DescriptionAntibiotic biosynthesis monooxygenase
Cds size345
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186139.6815388-CDS-P-wetherbeei_contig18218:139..4841683186139.6815388-CDS-P-wetherbeei_contig18218:139..484Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig18218 140..484 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18218.1.1prot_P-wetherbeei_contig18218.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig18218 140..484 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig18218.1.1

>prot_P-wetherbeei_contig18218.1.1 ID=prot_P-wetherbeei_contig18218.1.1|Name=mRNA_P-wetherbeei_contig18218.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=115bp
MANWLWKKHQKQEAHMLVISGEIRVAPESRIKAVAAMTRVEQATRKEEGC
LTYTFYADLEDANTFRIFEEWESDAALAAHFKAPHIAAFRAEMTEVKVLS
RQIKRYEVTSVAVL*
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mRNA from alignment at P-wetherbeei_contig18218:140..484+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig18218.1.1 ID=mRNA_P-wetherbeei_contig18218.1.1|Name=mRNA_P-wetherbeei_contig18218.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=345bp|location=Sequence derived from alignment at P-wetherbeei_contig18218:140..484+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCAAACTGGCTTTGGAAAAAACATCAGAAACAGGAGGCTCATATGCT GGTTATATCAGGTGAAATACGTGTCGCCCCGGAAAGCCGTATCAAAGCTG TGGCGGCGATGACCAGGGTGGAACAGGCCACCCGGAAAGAAGAAGGCTGC CTGACCTATACCTTTTATGCAGATCTGGAAGACGCCAATACCTTTCGGAT TTTCGAGGAATGGGAATCCGACGCGGCGCTGGCGGCGCATTTCAAGGCGC CACACATCGCAGCGTTTCGGGCCGAAATGACAGAAGTCAAGGTGCTATCA CGGCAGATCAAGCGCTATGAGGTCACGTCGGTGGCGGTACTGTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig18218:140..484+

>mRNA_P-wetherbeei_contig18218.1.1 ID=mRNA_P-wetherbeei_contig18218.1.1|Name=mRNA_P-wetherbeei_contig18218.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=345bp|location=Sequence derived from alignment at P-wetherbeei_contig18218:140..484+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCAAACTGGCTTTGGAAAAAACATCAGAAACAGGAGGCTCATATGCT
GGTTATATCAGGTGAAATACGTGTCGCCCCGGAAAGCCGTATCAAAGCTG
TGGCGGCGATGACCAGGGTGGAACAGGCCACCCGGAAAGAAGAAGGCTGC
CTGACCTATACCTTTTATGCAGATCTGGAAGACGCCAATACCTTTCGGAT
TTTCGAGGAATGGGAATCCGACGCGGCGCTGGCGGCGCATTTCAAGGCGC
CACACATCGCAGCGTTTCGGGCCGAAATGACAGAAGTCAAGGTGCTATCA
CGGCAGATCAAGCGCTATGAGGTCACGTCGGTGGCGGTACTGTAG
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