mRNA_P-wetherbeei_contig18200.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig18200.2.1
Unique NamemRNA_P-wetherbeei_contig18200.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig18200.2.1 vs. uniprot
Match: A0A6M5YU46_9BACT (Uncharacterized protein n=1 Tax=Frigoriglobus tundricola TaxID=2774151 RepID=A0A6M5YU46_9BACT)

HSP 1 Score: 519 bits (1337), Expect = 3.630e-185
Identity = 240/263 (91.25%), Postives = 247/263 (93.92%), Query Frame = 1
Query:    1 LAGTYNGKMPPALGSFPTFQGDARA--PGNPNASFAGGLFYLLPYIEQQNAYNWFQNAGGTGYDVEQGANPQSIGGCPWDGSNGIQTPKPYVCPSDPTYNPQTWGGIGSYALNGMIFQADWVGYSTFPTSISDGTSQTIFFTETYAGGNYNFSNAQTNLWWWDYNTFQTPTSSNGDCGPLNFVGAAYTPLFGPSATYCNTNFAATGWGGNFSVCGCRATSPHTGAINAGLGDGSVRTLSAGVSGQTWYAACTPSGGEVLGSDW 783
            LAGTY+GK+PPA+GSFPTFQGD RA    +PN+SFAG L YLLPYIEQQNAYNWFQN GGTGYDVEQGANPQSIGGCPWDGSNGIQTPKPYVCPSDPTYNPQTWGGIGSYALNGMIFQADWVGYSTFPTSI+DGTSQTIFFTETYAGGNYNFSNAQTNLWWWDYNTFQTPTSSNGDCGPLNFVGA+Y PLF PS TYCNTNFAATGWGGNFSVCGCRATSPHTG IN GLGDGSVRTLS GVSG TWYAACTPS GEVLGSDW
Sbjct:   61 LAGTYSGKLPPAIGSFPTFQGDKRAISDNSPNSSFAGALVYLLPYIEQQNAYNWFQNKGGTGYDVEQGANPQSIGGCPWDGSNGIQTPKPYVCPSDPTYNPQTWGGIGSYALNGMIFQADWVGYSTFPTSIADGTSQTIFFTETYAGGNYNFSNAQTNLWWWDYNTFQTPTSSNGDCGPLNFVGASYPPLFAPSPTYCNTNFAATGWGGNFSVCGCRATSPHTGGINVGLGDGSVRTLSPGVSGGTWYAACTPSNGEVLGSDW 323          
BLAST of mRNA_P-wetherbeei_contig18200.2.1 vs. uniprot
Match: A0A354GZL8_9BACT (Uncharacterized protein n=1 Tax=Planctomycetales bacterium TaxID=2053591 RepID=A0A354GZL8_9BACT)

HSP 1 Score: 379 bits (972), Expect = 1.940e-129
Identity = 179/262 (68.32%), Postives = 201/262 (76.72%), Query Frame = 1
Query:    1 LAGTYNGKMPPALGSFPTFQGDARAPGNPNASFAGGLFYLLPYIEQQNAYNWFQNAGGTGYDVEQGANPQSIGGCPWDGSNGIQTPKPYVCPSDPTYNPQTWGGIGSYALNGMIFQADWVGYSTFPTSISDGTSQTIFFTETYAGGNY-NFSNAQTNLWWWDYNTFQTPTSSNGDCGPLNFVGAAYTPLFGPSATYCNTNFAATGWGGNFSVCGCRATSPHTGAINAGLGDGSVRTLSAGVSGQTWYAACTPSGGEVLGSDW 783
            LAG+Y+GKMPP +GSFP+FQ DAR   N   SF G + YLLPY+EQ N Y W QNA GTGYD E+GA PQ+ GG P       QTPK Y+CPSDPTYN  TWGGIGSYA NGMIFQADWV YS +P+SI DGTS TIFFT+TYAGGNY N S  QT+LWWWDYN+FQTP+SSNGDCG L F G A+TPL  PS  YC  N A TGWGG FSVC CRAT+ HT  +N G+GDGS R +S+GVSG TW+AACTPSGGEVLG DW
Sbjct:   82 LAGSYSGKMPPGIGSFPSFQKDARGGNN---SFGGMMLYLLPYLEQGNLYTWCQNANGTGYDPEKGAGPQTQGGAP------NQTPKVYICPSDPTYNASTWGGIGSYAYNGMIFQADWVSYSNYPSSIQDGTSNTIFFTDTYAGGNYTNSSVNQTSLWWWDYNSFQTPSSSNGDCGSLGFSGPAFTPLIAPSVKYCGANTATTGWGGVFSVCSCRATAGHTSVVNVGMGDGSCRAVSSGVSGATWFAACTPSGGEVLGPDW 334          
BLAST of mRNA_P-wetherbeei_contig18200.2.1 vs. uniprot
Match: A0A225DE96_9BACT (Uncharacterized protein n=1 Tax=Fimbriiglobus ruber TaxID=1908690 RepID=A0A225DE96_9BACT)

HSP 1 Score: 231 bits (588), Expect = 1.280e-71
Identity = 127/263 (48.29%), Postives = 155/263 (58.94%), Query Frame = 1
Query:    4 AGTYNGKMPPALGSFPTFQGDARAPGNPNASFAGGLFYLLPYIEQQNAYNWFQNAGGTGYDVEQGANPQSIGGCPWDGSNGIQTPKPYVCPSDPTYNPQTWGG--IGSYALNGMIFQADWVGYSTFPTSISDGTSQTIFFTETYAGGNYNFSNAQTNLWWWDYNTFQTPTSSNGDCGP-LNFVGAAYTPLFGPSATYCNTNFAATGWGGNFSVCGCRATSPHTGAINAGLGDGSVRTLSAGVSGQTWYAACTPSGGEVLGSDW 783
            A TY G +PP +GSFPT        G     + G L++LLPYIEQQNAYN    A G GY +E G NPQ        G+      K Y+CPSDPT  P T G   +GSY  NG IF  D  G     ++ +DGTS TI  +E Y G    F N+  +LWWWDYN+FQ P   +GDCG    F G +Y PLF P  +YC  N  +  W    SVC CRATSPHTG IN  L DGSVRT+S+ ++G T+YAA TP+ G++LGSDW
Sbjct:   59 ASTYQGLLPPGIGSFPT---PGLGSGLTGGGYGGLLYHLLPYIEQQNAYNQSVTASG-GYSIELGGNPQ--------GATRRIPIKTYLCPSDPTV-PSTSGSDQVGSYCYNGTIFMTDSKGLPNLTSTFTDGTSNTILLSEQYGGFKPTFPNSFYSLWWWDYNSFQAPKGGDGDCGSSTGFQGPSYIPLFQPPISYCTANTVSISWT-TISVCMCRATSPHTGVINNVLADGSVRTISSSITGATYYAAVTPNQGDMLGSDW 307          
BLAST of mRNA_P-wetherbeei_contig18200.2.1 vs. uniprot
Match: A0A225E9Z8_9BACT (Uncharacterized protein n=2 Tax=Fimbriiglobus ruber TaxID=1908690 RepID=A0A225E9Z8_9BACT)

HSP 1 Score: 129 bits (325), Expect = 1.810e-32
Identity = 101/285 (35.44%), Postives = 133/285 (46.67%), Query Frame = 1
Query:    1 LAGTYNGKMPPALGSFPTFQGDARAPGNPNAS--FAGGLFYLLPYIEQQNAYNWFQNAGGTGYDVEQGANPQSIGGCPWDGSNGIQTPKPYVCPSDPT--------YNPQTWG-GIGSYALNGMIF-------------QADWVGYSTFPTSISDGTSQTIFFTETYAGGNYNFSNAQTNLWWWDYNTFQTPTSSNGDCGPLNFVGAAYTPLFGPSATYCNTNFAATGWGGNFSVCGCRATSPHTGAINAGLGDGSVRTLSAGVSGQTWYAACTPSGGEVLGSDW 783
             A TY GK+PPA  +FPT    + + G P A   F   + +LLPYIEQQN +N   +  G  Y +            P +G N ++  K +VCPSDP+        ++   WG G  SYA N  +F             Q  W G STFP S+ DGTS TI + E YAG     S    NLW W ++ +  P  + G  GP  +  +       P  + CN   A+               S HTG +NAGL DGSVRTLS  +S  T++ A  P+ G  L SDW
Sbjct:   48 FADTYTGKLPPACDTFPT----SNSGGGPTAGQMFGTSIVFLLPYIEQQNLWNASYSINGNWYGIN----------VPTNGGN-VRI-KTFVCPSDPSVGSAASVQWSGTNWGQGDCSYAANFQVFGVPGFTSGGNPPEQYFW-GKSTFPASLPDGTSNTILYVEKYAGCGSPGSGG--NLWAWGWDAYLGPLYAAGVTGPQTWQQSP-----NPWQSNCNPLLAS---------------SAHTGVMNAGLADGSVRTLSQSMSANTFWLATVPNDGTPLPSDW 293          
BLAST of mRNA_P-wetherbeei_contig18200.2.1 vs. uniprot
Match: A0A142XF25_9BACT (Type II secretion system protein G n=2 Tax=Gemmata TaxID=113 RepID=A0A142XF25_9BACT)

HSP 1 Score: 120 bits (301), Expect = 7.050e-29
Identity = 96/275 (34.91%), Postives = 141/275 (51.27%), Query Frame = 1
Query:    1 LAGTYNGKMPPALGSFPTFQGDARAPGNPNASFAGGLFYLLPYIEQQNAYN--WFQNAGGTGYDVEQGANPQSIGGCPWDGSNG--IQTP--KPYVCPSDPTYNPQTWG-GIGSYALNGMIFQAD--W--VGYSTFPTSISDGTSQTIFFTETYA---GGNYNFSNAQTNLWWWDYNTFQTPTSSNGDCGPLNFVGAAYTPLFGPSATYCNTNFAATGWGGNFSVCGCRATSPHTGAINAGLGDGSVRTLSAGVSGQTWYAACTPSGGEVLGSDW 783
            +A T NG MP +LG +P+F+  +   GN      G   +LLP+IEQ+N Y+  + ++ G  G+  ++  N  +     W G +G  +QT   K Y CPSD T      G G  SYA+N  +   +  W   GY  +P +I+DGTS TI + E  +    GNY      T+ +W D+ +     +++ D G     GAA  P F    +    +               RA+S HTG +   L DGSVR +S+GVSG T+++A TP+GGEVLGS+W
Sbjct:   60 MADTNNGNMPMSLGLYPSFRATS---GN---GHGGHFVHLLPFIEQKNWYDQSYKKSDGSAGFIDDRNGNLPTYSA--WGGPSGAELQTAVIKTYGCPSDATLTSNNGGRGRTSYAINSQLVGGNTYWGPQGYRKYPANITDGTSNTIIYVEKVSLTSSGNY------TDNFWPDWGS----VTADADLGYP--TGAAAVPQFNVRGSPAQADAG-------------RASSMHTGTVLVALADGSVRGVSSGVSGATFWSALTPNGGEVLGSNW 301          
BLAST of mRNA_P-wetherbeei_contig18200.2.1 vs. uniprot
Match: A0A7V3RNK7_9BACT (DUF1559 domain-containing protein n=1 Tax=Gemmataceae bacterium TaxID=2052164 RepID=A0A7V3RNK7_9BACT)

HSP 1 Score: 120 bits (302), Expect = 7.670e-29
Identity = 111/290 (38.28%), Postives = 142/290 (48.97%), Query Frame = 1
Query:    4 AGTYNGKMPPALGSFPTFQGDARAPGNPNASFAGGLFYLLPYIEQQNAYNWFQN-----AGGTGYDVEQGANPQSIGGCPWDGSNGI--QTPKPYVCPSDPT----YNPQTWGGIGSYALNGMIFQA---DWVGYST--FPTSISDGTSQTIFFTETYAGGNYNFSNAQTNLWWWDYNTFQTPTSSNGDCGPL--NFVGAAYTPLFGPSATY-------CNT-----NFAATGWGGNFSVCGCRATSPHTGAINAGLGDGSVRTLSAGVSGQTWYAACTPSGGEVLGSDW 783
            A T+ G +PP+ G +P       +P N +A     L ++LP+IEQQN YN         AG  G++   G NP       W G  G    T K Y CPSDPT    + PQ    + S  +NG +F+     W G     +P SI DGTS TIFFTE  A        A TN    + N F+       D GPL  +    A T   G +A +       CN      N  ATG  G+ +V    A+SPHTG INA +GDGSVR ++ G +  TW+ A TP+GGEVLGSDW
Sbjct:   63 ADTHQGLLPPSFGIYPV---PVPSPYNGDADL---LVHILPFIEQQNLYNLSLEPDDFAAGNHGFN---GKNPTYA---EW-GQAGYYNSTIKTYQCPSDPTLGMGWPPQQL--LTSVGINGQVFRLYAPPWNGVPAMRYPASIVDGTSVTIFFTEKEAVSYGGTEWAPTN----NVNIFR-------DWGPLIASTDNGAQTAYTGVAAIFQVMPPMGCNVGARWPNNGATGGCGHGNV----ASSPHTGGINAAMGDGSVRFVAQGTNPWTWWYALTPAGGEVLGSDW 322          
BLAST of mRNA_P-wetherbeei_contig18200.2.1 vs. uniprot
Match: A0A7C1KG92_9BACT (DUF1559 domain-containing protein n=3 Tax=Gemmataceae TaxID=1914233 RepID=A0A7C1KG92_9BACT)

HSP 1 Score: 119 bits (297), Expect = 2.390e-28
Identity = 95/269 (35.32%), Postives = 136/269 (50.56%), Query Frame = 1
Query:    4 AGTYNGKMPPALGSFPTFQGDARAPGNPNASFAGGLF-YLLPYIEQQNAYNWFQNAGGTGYDVEQGANPQSIGGCPWDGSNGIQTPKPYVCPSDPTYNPQTWGGIGSYALNGMIFQ---ADW-VGYSTFPTSISDGTSQTIFFTETYA---GGNYNFSNAQTNLWWWDYNTFQTPTSSNGDCGPLNFVGAAYTPLFGPSATYCNTNFAATGWGGNFSVC-GCRATSPHTGAINAGLGDGSVRTLSAGVSGQTWYAACTPSGGEVLGSDW 783
            A T+ GK+PP++G +P    +A+A  N N    GG+F ++LP+IE+Q  ++  ++          G N   I    W         K  +CP++ T +PQ      SY +NG +F+     W +GY+ +P +I+DGTS TIFF+E  A    GNYN +      +W D+     P  S+ D G     GAA  P   P  +                +C G RA+SPH G I   LGDGSVR +S  VSG TW+AA T + G+ LG+DW
Sbjct:   63 ADTHEGKLPPSIGLYPR---NAQANYNSN----GGIFLHILPFIEEQVMFDQTRSQ-----PDPDGRNGSFITYSQWVYVPDRGRTKKLLCPAEYT-DPQDNWARSSYGVNGRVFRHVYPGWGLGYTRYPAAITDGTSNTIFFSEKLARCNSGNYNEN------YWPDWG----PVFSSPDLGGTP-TGAASAPQIQPPTS------------NGVGICNGARASSPHVGGIQTALGDGSVRFVSQRVSGLTWWAALTHNAGDQLGNDW 295          
BLAST of mRNA_P-wetherbeei_contig18200.2.1 vs. uniprot
Match: A0A7V3RMK2_9BACT (DUF1559 domain-containing protein n=1 Tax=Gemmataceae bacterium TaxID=2052164 RepID=A0A7V3RMK2_9BACT)

HSP 1 Score: 112 bits (279), Expect = 1.110e-25
Identity = 91/262 (34.73%), Postives = 118/262 (45.04%), Query Frame = 1
Query:   10 TYNGKMPPALGSFPTFQGDARAPGNPNASFAGGLFYLLPYIEQQNAYNWFQNAGGTGYDVEQGANPQSIGGCPWDGSNGIQTPKPYVCPSDPTYN----PQTWGGIGSYALNGMIFQADWVGYSTFPTSISDGTSQTIFFTETYAGGNYNFSNAQTNLWWWDYNTFQTPTSSNGDCGPLNFVGAAYTPLFGPSATYCNTNFAATGWGGNFSVCGCRATSPHTGAINAGLGDGSVRTLSAGVSGQTWYAACTPSGGEVLGSDW 783
            T+ G +P A   +P     A      N S+   +F +LPY+EQQ  YN    A G G   + G+ P       + G   I+  K + CPSDPT +      T  G  SY  N      +W GYS +P S  DGTS TI FT+  A       +   N  WWD  +    T +  D  P +       PL  P  T CN+        GN++       S HTG I   LGDGSVR ++ G+S  TW  A  P+ G VLGSDW
Sbjct:   65 THQGTLPGACSRYPNSFPSA------NNSYGPAVFQILPYMEQQQIYNSTYQANG-GPTRQNGSFPDYEPYWNYFGGFTIKI-KTFYCPSDPTTSISDSRNTTSGSLSYGTNQQALPLEWHGYSKYPASFQDGTSNTIIFTDKAAT-----CSGSPNANWWDNGS----TFAVQDWSPTSNWYFTINPL--PVTTVCNSGTPL----GNYTDR--PPVSFHTGVIQVSLGDGSVRPVAQGLSFYTWLYALGPADGMVLGSDW 301          
BLAST of mRNA_P-wetherbeei_contig18200.2.1 vs. uniprot
Match: A0A6M5YLD6_9BACT (Uncharacterized protein n=1 Tax=Frigoriglobus tundricola TaxID=2774151 RepID=A0A6M5YLD6_9BACT)

HSP 1 Score: 112 bits (280), Expect = 1.240e-25
Identity = 101/283 (35.69%), Postives = 131/283 (46.29%), Query Frame = 1
Query:    4 AGTYNGKMPPALGSFPTFQGDARAPGNPNASFAGGLFY-LLPYIEQQNAYNWFQNAGG-TGYDVEQGANPQSIGGCPWDGSNGIQTPKPYVCPSDPTY----NPQTWGG--IGSYALNGMIF----QADW-----VGYSTFPTSISDGTSQTIFFTETYA---GGNYNFSNAQTNLWW---WDYNTFQTPTSSNGDCGPLNFVGAAYTPLFGPSATYCNTNFAATGWGGNFSVCGCRATSPHTGAINAGLGDGSVRTLSAGVSGQTWYAACTPSGGEVLGSDW 783
            A TYN   P    +   F G     GNP     G +F  LLPYIEQQN Y  FQN G  TG  ++      SIG      S  I   K Y CPSDPT+    N    GG   G Y  N  +F      D+     +G +   ++ SDGTS TI F E +    GG++        LW    W+YN        N   G +N+     T      A     + + T +  N +      T+ HTG++N  L DGSVR+L++G+SG TW+ ACTP+ GEV GSDW
Sbjct:   65 ASTYNDAFPALFDA--NFTGGDWGGGNP---CRGQVFVSLLPYIEQQNLYTTFQNVGNATGSYLDLQNQGVSIG------SGAIL--KTYTCPSDPTFGTGSNVNGVGGWASGCYVANFQVFGNPNYGDYAPNNGLGSANLKSTFSDGTSNTILFAEMFTQRPGGSWG-------LWAHGAWNYNYCPAFAVGNS-AGTMNYSSGFGTGTGQVGAGSKFLSVSPTAYSSNTAYVNI-TTALHTGSMNTSLADGSVRSLNSGLSGTTWWYACTPNQGEVFGSDW 325          
BLAST of mRNA_P-wetherbeei_contig18200.2.1 vs. uniprot
Match: A0A142XTI8_9BACT (Putative major pilin subunit n=3 Tax=Gemmata TaxID=113 RepID=A0A142XTI8_9BACT)

HSP 1 Score: 106 bits (265), Expect = 2.350e-23
Identity = 96/271 (35.42%), Postives = 122/271 (45.02%), Query Frame = 1
Query:   91 ASFAGGLFYLLPYIEQQNAYNWFQNAGGTGYDVEQGANPQSIGGCPWDGSNGIQTPKPYVCPSDPTYNPQT---WG-GIGSYALNGMIF-----------QADWVGYSTFPTSISDGTSQTIFFTETYAG----------GNYNFSNAQTNLWWWDYNTFQTPTSSNGDCGPLN---FVGAAYTPLFGPSAT------YCNTNFAATGWG--GNFSVCGC----RATSPHTGAINAGLGDGSVRTLSAGVSGQTWYAACTPSGGEVLGSDW 783
            A +A   F+LLP+IEQ N Y      GG G  V    N    GG  +     I   K Y CPSD T        W  G  SYA N  +F            ADW G +T    ISDGTS TI F E  +           G  N  N+    WW          +  G   P N   + G   +P+FG   +      Y   +   T +G  GN +  G     +A+SPH+G I  GL DGSVRT+S+GVS  TW+AACT +GG+++GSDW
Sbjct:   81 AYYAPFYFHLLPFIEQDNVYKSATPVGGGG--VIPLWNTPGQGGTQYLRQTRI---KVYQCPSDATIGTNAATDWTPGDASYAPNFQVFGNPNFNQGSVNPADWDGKTTL-VGISDGTSNTIAFAEKLSYCPGVTPATLVGPKNGPNSAGGSWW--LRGIYNSGAFTGTGSPPNTDSYPGDRVSPVFGGGVSGDGTRWYIGLDAKPTIFGIPGNNNTSGICDRGQASSPHSGLIQVGLADGSVRTVSSGVSAATWWAACTRNGGDMVGSDW 343          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18200.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6M5YU46_9BACT3.630e-18591.25Uncharacterized protein n=1 Tax=Frigoriglobus tund... [more]
A0A354GZL8_9BACT1.940e-12968.32Uncharacterized protein n=1 Tax=Planctomycetales b... [more]
A0A225DE96_9BACT1.280e-7148.29Uncharacterized protein n=1 Tax=Fimbriiglobus rube... [more]
A0A225E9Z8_9BACT1.810e-3235.44Uncharacterized protein n=2 Tax=Fimbriiglobus rube... [more]
A0A142XF25_9BACT7.050e-2934.91Type II secretion system protein G n=2 Tax=Gemmata... [more]
A0A7V3RNK7_9BACT7.670e-2938.28DUF1559 domain-containing protein n=1 Tax=Gemmatac... [more]
A0A7C1KG92_9BACT2.390e-2835.32DUF1559 domain-containing protein n=3 Tax=Gemmatac... [more]
A0A7V3RMK2_9BACT1.110e-2534.73DUF1559 domain-containing protein n=1 Tax=Gemmatac... [more]
A0A6M5YLD6_9BACT1.240e-2535.69Uncharacterized protein n=1 Tax=Frigoriglobus tund... [more]
A0A142XTI8_9BACT2.350e-2335.42Putative major pilin subunit n=3 Tax=Gemmata TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18200contigP-wetherbeei_contig18200:587..1372 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1210884.HG799466_gene12580
PFAMsN_methyl,SBP_bac_10
Model size786
Max annot lvl2|Bacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.59e-27
EggNOG OGsCOG4968@1|root,COG4968@2|Bacteria
DescriptionProkaryotic N-terminal methylation motif
Cds size762
COG categoryNU
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186139.1896765-CDS-P-wetherbeei_contig18200:586..13481683186139.1896765-CDS-P-wetherbeei_contig18200:586..1348Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig18200 587..1348 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186139.1993642-UTR-P-wetherbeei_contig18200:1348..13721683186139.1993642-UTR-P-wetherbeei_contig18200:1348..1372Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig18200 1349..1372 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18200.2.1prot_P-wetherbeei_contig18200.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig18200 587..1348 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig18200.2.1

>prot_P-wetherbeei_contig18200.2.1 ID=prot_P-wetherbeei_contig18200.2.1|Name=mRNA_P-wetherbeei_contig18200.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=254bp
MPPALGSFPTFQGDARAPGNPNASFAGGLFYLLPYIEQQNAYNWFQNAGG
TGYDVEQGANPQSIGGCPWDGSNGIQTPKPYVCPSDPTYNPQTWGGIGSY
ALNGMIFQADWVGYSTFPTSISDGTSQTIFFTETYAGGNYNFSNAQTNLW
WWDYNTFQTPTSSNGDCGPLNFVGAAYTPLFGPSATYCNTNFAATGWGGN
FSVCGCRATSPHTGAINAGLGDGSVRTLSAGVSGQTWYAACTPSGGEVLG
SDW*
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mRNA from alignment at P-wetherbeei_contig18200:587..1372-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig18200.2.1 ID=mRNA_P-wetherbeei_contig18200.2.1|Name=mRNA_P-wetherbeei_contig18200.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=786bp|location=Sequence derived from alignment at P-wetherbeei_contig18200:587..1372- (Phaeothamnion wetherbeei SAG_119_79)
CTCGCCGGCACCTACAACGGAAAGATGCCGCCCGCCCTCGGCTCGTTCCC GACGTTCCAGGGGGACGCCCGGGCGCCGGGCAACCCGAACGCTTCGTTCG CCGGCGGGCTGTTCTATCTGTTGCCCTACATCGAGCAGCAGAACGCGTAC AACTGGTTCCAGAACGCGGGCGGGACCGGCTACGACGTGGAGCAGGGGGC CAACCCGCAGTCGATCGGCGGCTGCCCCTGGGACGGCTCGAACGGGATCC AGACGCCCAAGCCGTACGTTTGCCCGTCCGATCCGACCTACAACCCGCAA ACCTGGGGCGGGATCGGCAGCTACGCGCTCAACGGCATGATCTTCCAGGC CGACTGGGTCGGCTACTCCACGTTCCCCACCTCCATCTCGGACGGGACGT CCCAGACGATCTTCTTCACCGAGACGTACGCGGGCGGCAACTACAATTTC TCGAACGCGCAAACCAATCTGTGGTGGTGGGATTATAACACCTTCCAGAC GCCCACGTCGTCCAACGGCGACTGCGGGCCGCTGAACTTCGTCGGGGCGG CGTACACCCCGCTGTTCGGCCCCTCGGCCACCTACTGCAACACGAACTTC GCGGCCACGGGCTGGGGCGGGAACTTCAGCGTGTGCGGCTGCCGGGCCAC GTCGCCCCACACGGGCGCGATCAACGCGGGCCTGGGCGACGGGAGCGTGC GCACGCTCTCGGCCGGCGTGTCCGGACAGACGTGGTACGCGGCCTGCACG CCGAGCGGCGGCGAGGTTCTCGGGTCGGACTGGTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig18200:587..1372-

>mRNA_P-wetherbeei_contig18200.2.1 ID=mRNA_P-wetherbeei_contig18200.2.1|Name=mRNA_P-wetherbeei_contig18200.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=762bp|location=Sequence derived from alignment at P-wetherbeei_contig18200:587..1372- (Phaeothamnion wetherbeei SAG_119_79)
ATGCCGCCCGCCCTCGGCTCGTTCCCGACGTTCCAGGGGGACGCCCGGGC
GCCGGGCAACCCGAACGCTTCGTTCGCCGGCGGGCTGTTCTATCTGTTGC
CCTACATCGAGCAGCAGAACGCGTACAACTGGTTCCAGAACGCGGGCGGG
ACCGGCTACGACGTGGAGCAGGGGGCCAACCCGCAGTCGATCGGCGGCTG
CCCCTGGGACGGCTCGAACGGGATCCAGACGCCCAAGCCGTACGTTTGCC
CGTCCGATCCGACCTACAACCCGCAAACCTGGGGCGGGATCGGCAGCTAC
GCGCTCAACGGCATGATCTTCCAGGCCGACTGGGTCGGCTACTCCACGTT
CCCCACCTCCATCTCGGACGGGACGTCCCAGACGATCTTCTTCACCGAGA
CGTACGCGGGCGGCAACTACAATTTCTCGAACGCGCAAACCAATCTGTGG
TGGTGGGATTATAACACCTTCCAGACGCCCACGTCGTCCAACGGCGACTG
CGGGCCGCTGAACTTCGTCGGGGCGGCGTACACCCCGCTGTTCGGCCCCT
CGGCCACCTACTGCAACACGAACTTCGCGGCCACGGGCTGGGGCGGGAAC
TTCAGCGTGTGCGGCTGCCGGGCCACGTCGCCCCACACGGGCGCGATCAA
CGCGGGCCTGGGCGACGGGAGCGTGCGCACGCTCTCGGCCGGCGTGTCCG
GACAGACGTGGTACGCGGCCTGCACGCCGAGCGGCGGCGAGGTTCTCGGG
TCGGACTGGTAG
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