mRNA_P-wetherbeei_contig18187.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig18187.1.1 vs. uniprot
Match: A0A521LUS6_9HYPH (Probable membrane transporter protein n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521LUS6_9HYPH) HSP 1 Score: 425 bits (1092), Expect = 1.550e-147 Identity = 225/246 (91.46%), Postives = 236/246 (95.93%), Query Frame = 2
Query: 317 MTTADIAFGLAVFLLAGTVKGLVGLGLPTITIALTSLVLPLTEAIALIALPTIFTNVWQAAVGGQFWAILRRQWPLIVPLTIVLYLTVWLIGQKGPNWAFLVLAGVLIVYSGLGLLRIRLHIHADLERVLAPVIGVASGFVAGLVGVPIIPLMPYLQGLDIKPSELVQTLGVVLCATSLTLTASLLFFGLLDGPRAIVSAAAVVPALAGMWVGQRIRLRLSVEQFRLAVLWALLLTGVYTFASRVL 1054
MTTA+IAFGLAVFLLAGTVKGLVGLGLPTITIALTSLVLPLTEAIALIALPTIFTNVWQAA+GG+FW ILRRQWPLIVPL I LYLT+WL+GQKGPNWAFLVLA VLIVYSGLGLLRIRLHIHADLE+ LAPVIGV SGFVAGLVGVPIIPLMPYLQGLDIKPSELVQ+LGVVLCATSLTLT SLL FGLLDGPRAIVSAAAVVPALAGMWVGQ+IR RLS+EQFRLAV WALLLTG+YTFASR+L
Sbjct: 1 MTTAEIAFGLAVFLLAGTVKGLVGLGLPTITIALTSLVLPLTEAIALIALPTIFTNVWQAAIGGRFWVILRRQWPLIVPLMIALYLTMWLVGQKGPNWAFLVLAAVLIVYSGLGLLRIRLHIHADLEKPLAPVIGVVSGFVAGLVGVPIIPLMPYLQGLDIKPSELVQSLGVVLCATSLTLTVSLLNFGLLDGPRAIVSAAAVVPALAGMWVGQQIRRRLSIEQFRLAVFWALLLTGLYTFASRLL 246
BLAST of mRNA_P-wetherbeei_contig18187.1.1 vs. uniprot
Match: A0A259MSN6_9PROT (Probable membrane transporter protein n=4 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A259MSN6_9PROT) HSP 1 Score: 406 bits (1043), Expect = 1.590e-139 Identity = 220/280 (78.57%), Postives = 241/280 (86.07%), Query Frame = 2
Query: 218 CRYRAVSGL-ALALPKSWPCSRSSPPLSRGGTSRMTTADIAFGLAVFLLAGTVKGLVGLGLPTITIALTSLVLPLTEAIALIALPTIFTNVWQAAVGGQFWAILRRQWPLIVPLTIVLYLTVWLIGQKGPNWAFLVLAGVLIVYSGLGLLRIRLHIHADLERVLAPVIGVASGFVAGLVGVPIIPLMPYLQGLDIKPSELVQTLGVVLCATSLTLTASLLFFGLLDGPRAIVSAAAVVPALAGMWVGQRIRLRLSVEQFRLAVLWALLLTGVYTFASRVL 1054
C R +G A ALP+ P S PP GGT +TT I GLA+FLLAGTVKGLVGLGLP I+IAL SL LPL+EA+ALIALPTI TNVWQA+VGG FW I+RRQWPL++PLT+VLYLTVWLIGQKGP WAFLVL VLIVYS LGLLRIRL IHADLE+ LAPVIGVASGFVAGLVGVPIIPLMPYLQGLDIKP ELVQTLGVVLCATSLTLTASLLFFG+LDGPRAIVSAAAV+PA+ GMW+GQ+IR RLSVEQFRLAV WALLLTG+YT A+R+L
Sbjct: 3 CSRRPSAGCGAPALPRRSPYWPSWPPSPPGGTELVTTDQIVVGLAIFLLAGTVKGLVGLGLPAISIALMSLFLPLSEAVALIALPTIITNVWQASVGGHFWHIVRRQWPLMLPLTVVLYLTVWLIGQKGPGWAFLVLGTVLIVYSALGLLRIRLTIHADLEKPLAPVIGVASGFVAGLVGVPIIPLMPYLQGLDIKPVELVQTLGVVLCATSLTLTASLLFFGVLDGPRAIVSAAAVIPAIGGMWLGQQIRSRLSVEQFRLAVFWALLLTGLYTVATRLL 282
BLAST of mRNA_P-wetherbeei_contig18187.1.1 vs. uniprot
Match: A0A1H8UA62_9PROT (Probable membrane transporter protein n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1H8UA62_9PROT) HSP 1 Score: 400 bits (1027), Expect = 1.190e-137 Identity = 214/246 (86.99%), Postives = 226/246 (91.87%), Query Frame = 2
Query: 317 MTTADIAFGLAVFLLAGTVKGLVGLGLPTITIALTSLVLPLTEAIALIALPTIFTNVWQAAVGGQFWAILRRQWPLIVPLTIVLYLTVWLIGQKGPNWAFLVLAGVLIVYSGLGLLRIRLHIHADLERVLAPVIGVASGFVAGLVGVPIIPLMPYLQGLDIKPSELVQTLGVVLCATSLTLTASLLFFGLLDGPRAIVSAAAVVPALAGMWVGQRIRLRLSVEQFRLAVLWALLLTGVYTFASRVL 1054
MTT I FGLAVFLLAGTVKGLVGLGLPTI IALT+LVLPLTEAIA+IALPTIF+NVWQAAVGG F ILRRQWPLIVPL I LYLT+WL+GQKGPNWAF+VLA +LI YS LGLLRIRLHIHADLE LAPVIG SGFVAG+VGVPIIPLMPYLQGLDIKPSELVQTLGVVLCATSLTLT SLL FGLLDGPRA+VSAAAVVPALAGMW+GQ+IR RLSVEQFRLAV WALLLTG+YTFASRVL
Sbjct: 1 MTTDQIIFGLAVFLLAGTVKGLVGLGLPTIVIALTTLVLPLTEAIAMIALPTIFSNVWQAAVGGNFGKILRRQWPLIVPLAIGLYLTMWLVGQKGPNWAFIVLATILIAYSALGLLRIRLHIHADLETPLAPVIGTVSGFVAGVVGVPIIPLMPYLQGLDIKPSELVQTLGVVLCATSLTLTLSLLNFGLLDGPRAVVSAAAVVPALAGMWLGQQIRQRLSVEQFRLAVFWALLLTGLYTFASRVL 246
BLAST of mRNA_P-wetherbeei_contig18187.1.1 vs. uniprot
Match: A0A521LQJ6_9HYPH (Probable membrane transporter protein n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521LQJ6_9HYPH) HSP 1 Score: 389 bits (1000), Expect = 1.520e-133 Identity = 205/246 (83.33%), Postives = 220/246 (89.43%), Query Frame = 2
Query: 317 MTTADIAFGLAVFLLAGTVKGLVGLGLPTITIALTSLVLPLTEAIALIALPTIFTNVWQAAVGGQFWAILRRQWPLIVPLTIVLYLTVWLIGQKGPNWAFLVLAGVLIVYSGLGLLRIRLHIHADLERVLAPVIGVASGFVAGLVGVPIIPLMPYLQGLDIKPSELVQTLGVVLCATSLTLTASLLFFGLLDGPRAIVSAAAVVPALAGMWVGQRIRLRLSVEQFRLAVLWALLLTGVYTFASRVL 1054
M T I GLAVFLLAG VKGLVGLGLP I+IAL SL LPL EAIALI LPTI TN+WQAAVGG FW I+RRQWPLI+PLT+VLYLT+WLIGQKGP WAFLVL VLIVYS LGL RIRLHIHADLE+ LAPVIGV SGFVAGLVGVPIIPLMPYLQGLD+KPSELVQTLGVVLCATS+TLTASLLFFGLLDGPRA VSAAAVVPAL GMW+GQ++R RLSVEQFRLAV WALLLTG+YT A+R+L
Sbjct: 1 MPTDQIVIGLAVFLLAGAVKGLVGLGLPAISIALMSLFLPLPEAIALITLPTIVTNIWQAAVGGNFWRIVRRQWPLILPLTVVLYLTIWLIGQKGPGWAFLVLGTVLIVYSSLGLFRIRLHIHADLEKPLAPVIGVVSGFVAGLVGVPIIPLMPYLQGLDVKPSELVQTLGVVLCATSITLTASLLFFGLLDGPRAAVSAAAVVPALGGMWLGQQVRSRLSVEQFRLAVFWALLLTGLYTVATRLL 246
BLAST of mRNA_P-wetherbeei_contig18187.1.1 vs. uniprot
Match: A0A1Q3KNR2_9PROT (Probable membrane transporter protein n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1Q3KNR2_9PROT) HSP 1 Score: 380 bits (976), Expect = 6.760e-130 Identity = 198/246 (80.49%), Postives = 221/246 (89.84%), Query Frame = 2
Query: 317 MTTADIAFGLAVFLLAGTVKGLVGLGLPTITIALTSLVLPLTEAIALIALPTIFTNVWQAAVGGQFWAILRRQWPLIVPLTIVLYLTVWLIGQKGPNWAFLVLAGVLIVYSGLGLLRIRLHIHADLERVLAPVIGVASGFVAGLVGVPIIPLMPYLQGLDIKPSELVQTLGVVLCATSLTLTASLLFFGLLDGPRAIVSAAAVVPALAGMWVGQRIRLRLSVEQFRLAVLWALLLTGVYTFASRVL 1054
M+ D+ GLAVFLLAGTVKGLVGLGLP I+IAL SL LPL EAIALI+LPTIFTN+WQAAVGG+F I+RRQWPLIVPL +VLYLTVWL+GQKGP+W+FLVL VLI YS LGL RIRLHIHADLE+ LAPVIGV SG +AGLVGVP++PLMPYLQGLDIKPSELVQTLGVVLCATS LTASLL FGLLDGPRA+VSAAAVVPA+ GMW+GQ+IR RLSVEQFRLAV WALLLTG+YTFA+R++
Sbjct: 1 MSAIDVVVGLAVFLLAGTVKGLVGLGLPAISIALMSLYLPLPEAIALISLPTIFTNIWQAAVGGKFKLIVRRQWPLIVPLAVVLYLTVWLVGQKGPDWSFLVLGTVLIAYSTLGLFRIRLHIHADLEKPLAPVIGVISGLIAGLVGVPVVPLMPYLQGLDIKPSELVQTLGVVLCATSFALTASLLLFGLLDGPRALVSAAAVVPAVVGMWLGQQIRSRLSVEQFRLAVFWALLLTGLYTFATRLM 246
BLAST of mRNA_P-wetherbeei_contig18187.1.1 vs. uniprot
Match: A0A1F2ZWL7_9PROT (Probable membrane transporter protein n=1 Tax=Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_66_14 TaxID=1797225 RepID=A0A1F2ZWL7_9PROT) HSP 1 Score: 375 bits (963), Expect = 6.390e-128 Identity = 195/246 (79.27%), Postives = 219/246 (89.02%), Query Frame = 2
Query: 317 MTTADIAFGLAVFLLAGTVKGLVGLGLPTITIALTSLVLPLTEAIALIALPTIFTNVWQAAVGGQFWAILRRQWPLIVPLTIVLYLTVWLIGQKGPNWAFLVLAGVLIVYSGLGLLRIRLHIHADLERVLAPVIGVASGFVAGLVGVPIIPLMPYLQGLDIKPSELVQTLGVVLCATSLTLTASLLFFGLLDGPRAIVSAAAVVPALAGMWVGQRIRLRLSVEQFRLAVLWALLLTGVYTFASRVL 1054
M DIAFGLAV LLAGT+KGLVGLGLPTITIALTSL +PLTEAIAL+ALPTIFTN+WQAAVGG FWAI+RRQW L++PL + LYLT+WL+GQKGPNWAFLVL VL++YSG+GLLRI + DLER +APVIGVASGFVAGLVGVPIIPLMPYL LD+KPSE+VQTLG+VLCATSLTLTASLL FGLLDGPRA VSAAAV+PAL GMW+GQRIR +LSVEQFRLAV AL+ G+YTFASR+L
Sbjct: 1 MAPQDIAFGLAVLLLAGTIKGLVGLGLPTITIALTSLAMPLTEAIALVALPTIFTNIWQAAVGGHFWAIVRRQWLLMLPLAVCLYLTMWLVGQKGPNWAFLVLGAVLVIYSGMGLLRIHPRLPPDLERPVAPVIGVASGFVAGLVGVPIIPLMPYLHALDVKPSEIVQTLGIVLCATSLTLTASLLSFGLLDGPRAAVSAAAVLPALGGMWLGQRIRKKLSVEQFRLAVFCALMAMGLYTFASRLL 246
BLAST of mRNA_P-wetherbeei_contig18187.1.1 vs. uniprot
Match: UPI001E54F119 (sulfite exporter TauE/SafE family protein n=1 Tax=Reyranella sp. MMS21-HV4-11 TaxID=2849149 RepID=UPI001E54F119) HSP 1 Score: 348 bits (892), Expect = 1.560e-117 Identity = 181/220 (82.27%), Postives = 201/220 (91.36%), Query Frame = 2
Query: 395 LPTITIALTSLVLPLTEAIALIALPTIFTNVWQAAVGGQFWAILRRQWPLIVPLTIVLYLTVWLIGQKGPNWAFLVLAGVLIVYSGLGLLRIRLHIHADLERVLAPVIGVASGFVAGLVGVPIIPLMPYLQGLDIKPSELVQTLGVVLCATSLTLTASLLFFGLLDGPRAIVSAAAVVPALAGMWVGQRIRLRLSVEQFRLAVLWALLLTGVYTFASRVL 1054
+P I+IALTSL LPL+EAIALIALPTI TNVWQAAVGG FW I+RRQWPL++PLT+VLYLTVWLIGQKGP+WAF+VL VLI+Y+ LGL RIRL IHADLE+ LAPVIGV SGFVAGLVGVPI+PLMPYLQGLDIKP ELVQTLGVVLCATSLTLTASLLFFG+LDGPRA+VS AAV+PAL GMW+GQRIR RLSVEQFRLAV WALL TG+YT A+R+L
Sbjct: 1 MPAISIALTSLFLPLSEAIALIALPTIVTNVWQAAVGGHFWHIVRRQWPLMLPLTVVLYLTVWLIGQKGPDWAFVVLGTVLIIYAALGLFRIRLTIHADLEKPLAPVIGVVSGFVAGLVGVPIVPLMPYLQGLDIKPVELVQTLGVVLCATSLTLTASLLFFGVLDGPRAMVSGAAVLPALGGMWLGQRIRSRLSVEQFRLAVFWALLATGLYTVATRLL 220
BLAST of mRNA_P-wetherbeei_contig18187.1.1 vs. uniprot
Match: A0A521LUS2_9HYPH (2-polyprenylphenol 6-hydroxylase n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A521LUS2_9HYPH) HSP 1 Score: 194 bits (493), Expect = 6.590e-54 Identity = 96/107 (89.72%), Postives = 99/107 (92.52%), Query Frame = 1
Query: 1 MGTKLNPKVNIWELARPLIEDWMRTHFGPRATVGRAVEDVAQAVRRLPRLIDSLHLVVEHERRIAERAAAPPLPVSGRFWPRIGFAEVVAVLALVAAIVA----WWH 309
MGTKLNPKVNIWELARPLIE+WMRTHFGPRATVGRAVED+AQAVRRLPRLIDSLHLVVE ERRIAERAAA PLPVSGR WPR GFAEVVAVLAL+AAIVA WWH
Sbjct: 408 MGTKLNPKVNIWELARPLIEEWMRTHFGPRATVGRAVEDIAQAVRRLPRLIDSLHLVVERERRIAERAAALPLPVSGRLWPRFGFAEVVAVLALIAAIVATAAAWWH 514
BLAST of mRNA_P-wetherbeei_contig18187.1.1 vs. uniprot
Match: A0A537MMD5_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537MMD5_9PROT) HSP 1 Score: 163 bits (412), Expect = 1.100e-46 Identity = 74/103 (71.84%), Postives = 86/103 (83.50%), Query Frame = 1
Query: 1 MGTKLNPKVNIWELARPLIEDWMRTHFGPRATVGRAVEDVAQAVRRLPRLIDSLHLVVEHERRIAERAAAPPLPVSGRFWPRIGFAEVVAVLALVAAIVAWWH 309
MGT+LNPKVNIWELA+PLIEDWMR HFGPRAT+ RA ED+AQ +RRLPRL+DSLHL+ E ERR ER A P P R W R+GFAE++AVLAL+AA+VAWWH
Sbjct: 1 MGTRLNPKVNIWELAQPLIEDWMRDHFGPRATLQRAAEDLAQGLRRLPRLVDSLHLIAERERRQVERDAVPRPPEPARSWLRVGFAEIIAVLALIAALVAWWH 103
BLAST of mRNA_P-wetherbeei_contig18187.1.1 vs. uniprot
Match: A0A0S1Y9Q5_9BORD (Probable membrane transporter protein n=3 Tax=Alcaligenaceae TaxID=506 RepID=A0A0S1Y9Q5_9BORD) HSP 1 Score: 165 bits (418), Expect = 1.400e-45 Identity = 92/218 (42.20%), Postives = 137/218 (62.84%), Query Frame = 2
Query: 344 LAVFLLAGTVKGLVGLGLPTITIALTSLVLPLTEAIALIALPTIFTNVWQAAVGGQFWAILRRQWPLIVPLTIVLYLTV-WLIGQKGPNWAFLVLAGVLIVYSGLGLLRIRLHIHADLERVLAPVIGVASGFVAGLVGVPIIPLMPYLQGLDIKPSELVQTLGVVLCATSLTLTASLLFFGLLDGPRAIVSAAAVVPALAGMWVGQRIRLRLSVEQFR 994
+A FL+AGTVKG++GLGLPT++I L S+ + +A AL+ +P++ TNVWQ A+GG+F +LRR WP++ + I + WL G+ WA L L++Y+ +GL +RL + ++ L PV+G +G V GV +IP +PYLQ L ++ +ELVQ +G+ A+++ L L+ G L G A S A+VPAL GMW GQ +R R+S FR
Sbjct: 20 VASFLVAGTVKGVIGLGLPTVSIGLLSIAMAPAQAAALLIIPSMVTNVWQLAIGGRFLYLLRRLWPMLAGVCIGTWAAAAWLAGRS-TGWAGHALGAALVIYAAVGLSAVRLSVPLRMQGWLGPVVGATTGVVTSATGVFVIPAVPYLQALGLEKNELVQAMGLAFTASTIALAGDLVHSGDLGGREAWASLLALVPALLGMWFGQWLRQRVSASTFR 236 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18187.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig18187.1.1 >prot_P-wetherbeei_contig18187.1.1 ID=prot_P-wetherbeei_contig18187.1.1|Name=mRNA_P-wetherbeei_contig18187.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=247bp MTTADIAFGLAVFLLAGTVKGLVGLGLPTITIALTSLVLPLTEAIALIALback to top mRNA from alignment at P-wetherbeei_contig18187:306..1362- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig18187.1.1 ID=mRNA_P-wetherbeei_contig18187.1.1|Name=mRNA_P-wetherbeei_contig18187.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1057bp|location=Sequence derived from alignment at P-wetherbeei_contig18187:306..1362- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig18187:306..1362- >mRNA_P-wetherbeei_contig18187.1.1 ID=mRNA_P-wetherbeei_contig18187.1.1|Name=mRNA_P-wetherbeei_contig18187.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=741bp|location=Sequence derived from alignment at P-wetherbeei_contig18187:306..1362- (Phaeothamnion wetherbeei SAG_119_79)back to top |