mRNA_P-wetherbeei_contig18173.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig18173.1.1 vs. uniprot
Match: A0A8J6AWR7_9EUKA (Reverse transcriptase domain-containing protein n=1 Tax=Carpediemonas membranifera TaxID=201153 RepID=A0A8J6AWR7_9EUKA) HSP 1 Score: 66.6 bits (161), Expect = 1.130e-9 Identity = 54/154 (35.06%), Postives = 75/154 (48.70%), Query Frame = 1
Query: 4 KAQPIAVGNALRRLFASAFFWENRPYLAKLMQEA--GHFGVGVSGGVQIVAAVARFIHESGEWLLSLDDANAFNFILRGAFLPAVAKELDGAGGYALRVYGCLGDPPPALLYRMESGDVLTIRSAGGVEQGEQGDPLDPVFFSLGILAAMRAFR 459
K +P+A+G ALRR+ A A L KL +E FG+G S G++ + A+ R + G +LSLD +NA+N + R L V+ Y Y + L SG VL RS GV+QG DPL P+ FSLG+ + R
Sbjct: 251 KLRPVAMGEALRRIAAKA---AAETVLPKLREEVFVDQFGLGESCGLERMVAITRRHFDDGGTVLSLDLSNAYNTLSRDFLLRCVSTYCPALVDYVKGQYS-------SSLLLSTSGVVL--RSEEGVQQG---DPLSPLLFSLGMKPVLDRLR 389
BLAST of mRNA_P-wetherbeei_contig18173.1.1 vs. uniprot
Match: A0A8J6B6M1_9EUKA (Reverse transcriptase domain-containing protein n=4 Tax=Carpediemonas membranifera TaxID=201153 RepID=A0A8J6B6M1_9EUKA) HSP 1 Score: 66.6 bits (161), Expect = 1.250e-9 Identity = 54/154 (35.06%), Postives = 75/154 (48.70%), Query Frame = 1
Query: 4 KAQPIAVGNALRRLFASAFFWENRPYLAKLMQEA--GHFGVGVSGGVQIVAAVARFIHESGEWLLSLDDANAFNFILRGAFLPAVAKELDGAGGYALRVYGCLGDPPPALLYRMESGDVLTIRSAGGVEQGEQGDPLDPVFFSLGILAAMRAFR 459
K +P+A+G ALRR+ A A L KL +E FG+G S G++ + A+ R + G +LSLD +NA+N + R L V+ Y Y + L SG VL RS GV+QG DPL P+ FSLG+ + R
Sbjct: 518 KLRPVAMGEALRRIAAKA---AAETVLPKLREEVFVDQFGLGESCGLERMVAITRRHFDDGGTVLSLDLSNAYNTLSRDFLLRCVSTYCPALVDYVKGQYS-------SSLLLSTSGVVL--RSEEGVQQG---DPLSPLLFSLGMKPVLDRLR 656
BLAST of mRNA_P-wetherbeei_contig18173.1.1 vs. uniprot
Match: A0A5M6BUW3_9TREE (Reverse transcriptase domain-containing protein n=1 Tax=Kwoniella shandongensis TaxID=1734106 RepID=A0A5M6BUW3_9TREE) HSP 1 Score: 65.9 bits (159), Expect = 2.310e-9 Identity = 56/157 (35.67%), Postives = 74/157 (47.13%), Query Frame = 1
Query: 10 QPIAVGNALRRLFASAFFWENRPYLAKLMQEAGHFGVGVSGGVQ-IVAAVARFIHESGEW-----LLSLDDANAFNFILRGAFLPAVAKELDGAGGYALRVYGCLGDPPPALLYRMESGDVLTIRSAGGVEQGEQGDPLDPVFFSLGILAAMRAFRA 462
+PIAVG RL A F N + + + FG+G GGV+ I+ AV + + L SLD +NAFN + R + K A YG P P LLY G+V+ I S GV QG DPL P+FFS+GI A+ +A
Sbjct: 513 RPIAVGEMFYRLSMKAIFKSN--FQTEFLSP-NQFGIGSKGGVETIIHAVQMMVDRHPAFRRFRHLTSLDASNAFNALSRRKLANCIKKYAPSLLRSAEWSYG---KPSPLLLYG--GGEVVEIPSEDGVRQG---DPLGPLFFSIGIREAVDELQA 658
BLAST of mRNA_P-wetherbeei_contig18173.1.1 vs. uniprot
Match: UPI0018CFFB94 (uncharacterized protein LOC119692769 n=1 Tax=Plutella xylostella TaxID=51655 RepID=UPI0018CFFB94) HSP 1 Score: 60.1 bits (144), Expect = 1.230e-7 Identity = 49/144 (34.03%), Postives = 64/144 (44.44%), Query Frame = 1
Query: 10 QPIAVGNALRRLFASAFFWENRPYLAKLMQEAGHFGVGVSGGVQIVAAVARFIHESGEW--LLSLDDANAFNFILRGAFLPAVAKELDGAGGYALRVYGCLGDPPPALLYRMESGDVLTIRSAGGVEQGEQGDPLDPVFFSLGI 435
+PIAVGN +RR + + P L+K + G G GG + AR G++ LL +D NAFN I R A L + + Y + Y P L Y+ I SA G +QG DPL P FSLGI
Sbjct: 69 RPIAVGNTIRRTASKICCRKMLPELSKKFEPI-QLGFGTKGGCEAAVHAARTFITKGDFQVLLKVDVKNAFNSINRSALLTEIRSHANPIYKYIWQCYS----KPSKLSYKNHH-----ILSATGCQQG---DPLGPAIFSLGI 199
BLAST of mRNA_P-wetherbeei_contig18173.1.1 vs. uniprot
Match: A0A1Q9ENT7_SYMMI (132 kDa protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9ENT7_SYMMI) HSP 1 Score: 56.2 bits (134), Expect = 4.830e-6 Identity = 54/159 (33.96%), Postives = 73/159 (45.91%), Query Frame = 1
Query: 16 IAVGNALRRL--------FASAFFWENRPYLAKLMQEAGHFGVGVSGGVQIVAAVARFIHESGEWLLSLDDANAFNFILRGAFLPAVAKELDGAG--GYALRVYGCLGDPPPALLYRMESGDVLTIRSAGGVEQGEQGDPLDPVFFSLGILAAMRAFRA 462
I VG+ LRRL FA AF RP+ L AG + S +Q+ + + +LS+D A++ I R A L A+ D A + YG P L+R ++G V I A G GEQGDPL P F+LGI A+ A +A
Sbjct: 508 IVVGDYLRRLVARTLAQHFAPAFDVATRPHQYALATRAGTEALAHS--LQLECEIDPTLT-----VLSVDGVGAYDLISRLAMLRALRNTPDAASVLPFVRLFYG----QPSTFLWRDDAGVVHRIVQAEG---GEQGDPLMPALFALGIAPALAALQA 652
BLAST of mRNA_P-wetherbeei_contig18173.1.1 vs. uniprot
Match: A0A1Q9CF39_SYMMI (132 kDa protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9CF39_SYMMI) HSP 1 Score: 56.2 bits (134), Expect = 5.050e-6 Identity = 54/159 (33.96%), Postives = 73/159 (45.91%), Query Frame = 1
Query: 16 IAVGNALRRL--------FASAFFWENRPYLAKLMQEAGHFGVGVSGGVQIVAAVARFIHESGEWLLSLDDANAFNFILRGAFLPAVAKELDGAG--GYALRVYGCLGDPPPALLYRMESGDVLTIRSAGGVEQGEQGDPLDPVFFSLGILAAMRAFRA 462
I VG+ LRRL FA AF RP+ L AG + S +Q+ + + +LS+D A++ I R A L A+ D A + YG P L+R ++G V I A G GEQGDPL P F+LGI A+ A +A
Sbjct: 1464 IVVGDYLRRLVARTLAQHFAPAFDVATRPHQYALATRAGTEALAHS--LQLECEIDPTLT-----VLSVDGVGAYDLISRLAMLRALRNTPDAASVLPFVRLFYG----QPSTFLWRDDAGVVHRIVQAEG---GEQGDPLMPALFALGIAPALAALQA 1608
BLAST of mRNA_P-wetherbeei_contig18173.1.1 vs. uniprot
Match: A0A812TCN6_9DINO (RplS protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812TCN6_9DINO) HSP 1 Score: 55.8 bits (133), Expect = 6.460e-6 Identity = 47/169 (27.81%), Postives = 78/169 (46.15%), Query Frame = 1
Query: 16 IAVGNALRRLFASAFFWENRPYLAKLMQEAGHFGVGVSGGVQIVAAVARFIHESGEW--LLSLDDANAFNFILRGAFLPAVAKELDGAG--GYALRVYGCLGDPPPALLYRMESGDVLTIRSAGGVEQGEQGDPLDPVFFSLGILAAMRAFRASAAANGCSLVGILDDL 510
+ VG+ LRRL A + ++ + + F + G + +A + +SG +LS+D AF+F+ R + L + A +A YG P + ++ + G + A G GEQGDPL P F+LG+ A+R+F+A G + LDD+
Sbjct: 377 LVVGDFLRRLVARTLAQQFSQHIDEATRPH-QFALSTRAGAEALAHCLQLETDSGPHCTVLSVDGIGAFDFVSRQSMLTELRNTPGAAAMLSFARLFYG----RPSSFVWSDDDGATHLVSQAEG---GEQGDPLMPALFALGLAPALRSFQAELL-PGERVRAFLDDI 536
BLAST of mRNA_P-wetherbeei_contig18173.1.1 vs. uniprot
Match: A0A813ISX4_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813ISX4_POLGL) HSP 1 Score: 55.5 bits (132), Expect = 8.850e-6 Identity = 46/147 (31.29%), Postives = 67/147 (45.58%), Query Frame = 1
Query: 4 KAQPIAVGNALRRLFASAFFWENRPYLAKLMQEAGHFGVGVSGGVQIVAAVARFIHESGEWL--LSLDDANAFNFILRGAFLPAVAKELDGAGGYALRVYGC-LGDPPPALLYRMESGDVLTIRSAGGVEQGEQGDPLDPVFFSLGI 435
K +P+ G LRRL ASA ++ +A EA F VG G++ + A R + E+ L L D +AFN + R V +L+ + L L P A+L + + L GV+QG DPL P F+LG+
Sbjct: 228 KLRPLMCGATLRRLSASALCSFDKELMAASAGEAHQFAVGTPAGIEKLGATLRTLLEAFPELAVLQFDAVSAFNNMSR----ETVLAKLEATAPHLLTFAALWLTRPSVAVLTKTDGSYALLPTVTSGVDQG---DPLSPFLFALGL 367
BLAST of mRNA_P-wetherbeei_contig18173.1.1 vs. uniprot
Match: A0A6P7TVY3_OCTVU (uncharacterized protein LOC115227355 n=1 Tax=Octopus vulgaris TaxID=6645 RepID=A0A6P7TVY3_OCTVU) HSP 1 Score: 52.4 bits (124), Expect = 9.210e-5 Identity = 49/146 (33.56%), Postives = 64/146 (43.84%), Query Frame = 1
Query: 10 QPIAVGNALRRLFASAFFWENRPYLAKLMQEAGHFGVGVSGGVQI-VAAVARFIHESGEW---LLSLDDANAFNFILRGAFLPAVAKELDGAGGYALRVYGCLGDPPPALLYRMESGDVLTIRSAGGVEQGEQGDPLDPVFFSLGI 435
+PIAVG+ RRL + P L LM GVG GG + + + F H + ++ LD NAFN ILR + L + Y L Y P L++ I S+ GV+QG DPL PV F LGI
Sbjct: 30 RPIAVGSVFRRLASKMACRAVIPTLTPLMCPI-QLGVGTPGGCEAAIHGIRAFNHVNNNTPHIIVKLDIRNAFNTILRDSILENCLEFCPEIYNYILSSYA----KPSTLVH-----GPYHISSSSGVQQG---DPLGPVLFCLGI 162 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18173.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig18173.1.1 >prot_P-wetherbeei_contig18173.1.1 ID=prot_P-wetherbeei_contig18173.1.1|Name=mRNA_P-wetherbeei_contig18173.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=174bp MKAQPIAVGNALRRLFASAFFWENRPYLAKLMQEAGHFGVGVSGGVQIVAback to top mRNA from alignment at P-wetherbeei_contig18173:323..844- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig18173.1.1 ID=mRNA_P-wetherbeei_contig18173.1.1|Name=mRNA_P-wetherbeei_contig18173.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=522bp|location=Sequence derived from alignment at P-wetherbeei_contig18173:323..844- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig18173:323..844- >mRNA_P-wetherbeei_contig18173.1.1 ID=mRNA_P-wetherbeei_contig18173.1.1|Name=mRNA_P-wetherbeei_contig18173.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=522bp|location=Sequence derived from alignment at P-wetherbeei_contig18173:323..844- (Phaeothamnion wetherbeei SAG_119_79)back to top |