mRNA_P-wetherbeei_contig18155.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig18155.1.1
Unique NamemRNA_P-wetherbeei_contig18155.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig18155.1.1 vs. uniprot
Match: A0A1F4BDV9_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_26 TaxID=1797492 RepID=A0A1F4BDV9_9PROT)

HSP 1 Score: 327 bits (837), Expect = 3.210e-109
Identity = 161/252 (63.89%), Postives = 190/252 (75.40%), Query Frame = 1
Query:    1 YYPCDTGYHDTQHVLDVTLAMARLLHGYQRA-GREPLEARLFSLGIILALYHDCGYIRRRNDTRHENGAEYTLTHVSRGARYLRDYLPQIGMADLAKVGARVLHFTGYEIPIEKIRLPQPIFRVIGNLLGTADILGQMADRCYLEKCYDRLFPEFVLGGIARRRNGSGDEQVIFASATDLISKTPDFYATAAHRLDAVLESAYRYAEPHFGGRNYYVEAVEQNITYARKVGVEGDTQL-RRQPPQVLVSAQP 750
            Y  CDT YHD QHVLDVTL MARL+ G  RA   E +  RLF  GII AL+HDCGYIR R DT+H NGAEYT  HVSRGAR+L +YLP IGMADLA+  AR +HFTGYEIP++KIR+P P FR+IGNLLG+ADIL QMADRCYLEKCYDRL+PEFV GGIAR+R+  G E++IFASA DLI KTP FY  A  RL   L   Y Y   HFGG+N Y + +E+NI++AR + VEGD  L RR+PP++   A+P
Sbjct:   60 YCECDTDYHDVQHVLDVTLGMARLMDGCVRATSSETITERLFRFGIITALHHDCGYIRHRKDTKHANGAEYTAVHVSRGARFLEEYLPTIGMADLAQAAARTVHFTGYEIPVDKIRVPGPEFRLIGNLLGSADILAQMADRCYLEKCYDRLYPEFVRGGIARKRHKDGHEEIIFASAADLIFKTPRFYQGATKRLKQDLGGCYNYIAEHFGGQNLYFDELEKNISHARSIAVEGDISLLRRRPPKLTEGAEP 311          
BLAST of mRNA_P-wetherbeei_contig18155.1.1 vs. uniprot
Match: A0A0S8C4F2_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium SG8_41 TaxID=1703391 RepID=A0A0S8C4F2_9PROT)

HSP 1 Score: 322 bits (826), Expect = 1.500e-107
Identity = 162/260 (62.31%), Postives = 195/260 (75.00%), Query Frame = 1
Query:    1 YYPCDTGYHDTQHVLDVTLAMARLLHGYQRAGR-EPLEARLFSLGIILALYHDCGYIRRRNDTRHENGAEYTLTHVSRGARYLRDYLPQIGMADLAKVGARVLHFTGYEIPIEKIRLPQPIFRVIGNLLGTADILGQMADRCYLEKCYDRLFPEFVLGGIARRRNGSGDEQVIFASATDLISKTPDFYATAAHRLDAVLESAYRYAEPHFGGRNYYVEAVEQNITYARKVGVEGD-TQLRRQPP-QVLVSAQPQPQLQLI 771
            ++ C+T YHD QHVLDVTLAMARLL G  R+ R   +  RLF  G+I ALYHDCGYIR R DT+H NGAEYT  HVSRGAR+L +Y+P+IGMADLA+  AR +HFTGYE+ ++KIR+P P FR+IGNLLG+ADIL QMADRCYLEKCYDRL+PEFVLGGIAR+R   G EQV+FASA +LI KTP FY  A+ RL   L   Y Y E HFGG+N Y + +E+NI +AR +  EGD + LRR+PP Q        PQL+LI
Sbjct:   60 FHECETDYHDLQHVLDVTLAMARLLDGCVRSTRANSVSERLFRFGVITALYHDCGYIRHRKDTKHGNGAEYTAIHVSRGARFLEEYMPKIGMADLARAAARTIHFTGYEVAVDKIRVPGPEFRLIGNLLGSADILAQMADRCYLEKCYDRLYPEFVLGGIARKRGPDGSEQVLFASAAELIFKTPLFYQGASRRLRQDLGGCYNYIEKHFGGQNLYFDELEKNINHARAIAAEGDISMLRRRPPAQEENEENSDPQLRLI 319          
BLAST of mRNA_P-wetherbeei_contig18155.1.1 vs. uniprot
Match: A0A7C3NNW7_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7C3NNW7_9PROT)

HSP 1 Score: 321 bits (822), Expect = 6.270e-107
Identity = 154/244 (63.11%), Postives = 189/244 (77.46%), Query Frame = 1
Query:    1 YYPCDTGYHDTQHVLDVTLAMARLLHGYQRA-GREPLEARLFSLGIILALYHDCGYIRRRNDTRHENGAEYTLTHVSRGARYLRDYLPQIGMADLAKVGARVLHFTGYEIPIEKIRLPQPIFRVIGNLLGTADILGQMADRCYLEKCYDRLFPEFVLGGIARRRNGSGDEQVIFASATDLISKTPDFYATAAHRLDAVLESAYRYAEPHFGGRNYYVEAVEQNITYARKVGVEGD-TQLRRQPP 726
            ++ C+T YHD QHVLDVTLAMARL+ G  RA G   +  RLF  GII ALYHDCGYIR R DT+H+NGAEYT  HVSRG R+L +YLP+IGM DLA+  ARV+HFTGYEIP+++IR+P P FR+IGNLLG+ADIL QMADRCYLEKCYDRL+PEFV  GIAR+R+  G E+V+FASA DLI KTP FY  A  RL   L  +Y Y E HF G+N Y + +E+NI +AR + ++GD ++LRR+PP
Sbjct:   60 FHECETDYHDLQHVLDVTLAMARLMDGCVRATGAATIGERLFLFGIIAALYHDCGYIRHRKDTKHQNGAEYTTVHVSRGGRFLEEYLPKIGMGDLAQAAARVIHFTGYEIPVDRIRVPGPEFRLIGNLLGSADILAQMADRCYLEKCYDRLYPEFVRAGIARKRHRDGTEEVLFASAADLIFKTPRFYQGATRRLKQDLAGSYNYIEEHFSGQNLYFDELEKNINHARTIAIDGDISRLRRRPP 303          
BLAST of mRNA_P-wetherbeei_contig18155.1.1 vs. uniprot
Match: A0A6M4GUD0_9PROT (HDc domain-containing protein n=1 Tax=Usitatibacter rugosus TaxID=2732067 RepID=A0A6M4GUD0_9PROT)

HSP 1 Score: 313 bits (801), Expect = 6.050e-104
Identity = 149/247 (60.32%), Postives = 184/247 (74.49%), Query Frame = 1
Query:    1 YYPCDTGYHDTQHVLDVTLAMARLLHGYQ--RAGREPLEARLFSLGIILALYHDCGYIRRRNDTRHENGAEYTLTHVSRGARYLRDYLPQIGMADLAKVGARVLHFTGYEIPIEKIRLPQPIFRVIGNLLGTADILGQMADRCYLEKCYDRLFPEFVLGGIARRRNGSGDEQVIFASATDLISKTPDFYATAAHRLDAVLESAYRYAEPHFGGRNYYVEAVEQNITYARKVGVEGDTQLRRQPPQVL 735
            Y  CDT YHD QHVL+VTLAMARLL GY+  R     ++ RLF LG+I AL+HDCGYIR+R D RH +GAEYT  HVSRGAR+L+ YLP IGM + A V   ++HFTGYE P+  IR+P PIF++IG+LLG+ADI+ QM+DRCYLEKC DRLFPEFV GGI R++ G G E V+FASA DL+ KTP FY TA+ RLD  L   YRYA+ HFGG N Y++AV+QN+ +A ++G      LRRQPP  +
Sbjct:   60 YAACDTDYHDLQHVLEVTLAMARLLDGYEHSRGDGPSIDDRLFQLGVICALFHDCGYIRKRGDKRHRHGAEYTSKHVSRGARFLKGYLPTIGMEEFADVAGSIVHFTGYERPVATIRVPSPIFKLIGSLLGSADIIAQMSDRCYLEKCRDRLFPEFVAGGITRKQTGKG-EIVVFASAEDLVRKTPSFYQTASRRLDTDLGGCYRYAQTHFGGNNLYMDAVQQNVRFAERLGAGAQMALRRQPPSTI 305          
BLAST of mRNA_P-wetherbeei_contig18155.1.1 vs. uniprot
Match: A0A536YTL5_9PROT (Uncharacterized protein n=7 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536YTL5_9PROT)

HSP 1 Score: 310 bits (795), Expect = 6.420e-103
Identity = 145/248 (58.47%), Postives = 194/248 (78.23%), Query Frame = 1
Query:    1 YYPCDTGYHDTQHVLDVTLAMARLLHGYQRA--GREPLEARLFSLGIILALYHDCGYIRRRNDTRHENGAEYTLTHVSRGARYLRDYLPQIGMADLAKVGARVLHFTGYEIPIEKIRLPQPIFRVIGNLLGTADILGQMADRCYLEKCYDRLFPEFVLGGIARRRNGSGDEQVIFASATDLISKTPDFYATAAHRLDAVLESAYRYAEPHFGGRNYYVEAVEQNITYARKVGVEGD-TQLRRQPPQVL 735
            Y+ CDT YHD QHVL+VTLAMARL+ GY+RA  G EPL+A +F LG+I AL+HDCGYIR  +D +H NG E TLTHVSRGAR+LRDYLP+IGM ++A V A ++HFTGYEIP+ +I++P   ++++G+LLG+ADI+ QM+DRCYLEKC DRL+PEF+ GGIAR+R   G+E+V++ S  DL+ KTP FY  A+ RLDA L  A++YA  HFGG++ Y+E + +NI +A+ + VEGD T L+R PP  +
Sbjct:   62 YHACDTAYHDIQHVLEVTLAMARLIDGYERARMGLEPLDAAMFRLGVITALFHDCGYIRTLDDRQHRNGGELTLTHVSRGARFLRDYLPKIGMGEVADVAASLIHFTGYEIPVAEIKVPSLGYKLLGSLLGSADIIAQMSDRCYLEKCRDRLYPEFLAGGIARKRLPDGNEEVVYESGEDLVRKTPHFYQGASRRLDADLGGAHKYARDHFGGQHLYLEELTKNIEFAQAINVEGDGTALKRNPPNTI 309          
BLAST of mRNA_P-wetherbeei_contig18155.1.1 vs. uniprot
Match: A0A536SR08_9PROT (Uncharacterized protein n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536SR08_9PROT)

HSP 1 Score: 309 bits (791), Expect = 2.350e-102
Identity = 141/247 (57.09%), Postives = 190/247 (76.92%), Query Frame = 1
Query:    1 YYPCDTGYHDTQHVLDVTLAMARLLHGYQRA--GREPLEARLFSLGIILALYHDCGYIRRRNDTRHENGAEYTLTHVSRGARYLRDYLPQIGMADLAKVGARVLHFTGYEIPIEKIRLPQPIFRVIGNLLGTADILGQMADRCYLEKCYDRLFPEFVLGGIARRRNGSGDEQVIFASATDLISKTPDFYATAAHRLDAVLESAYRYAEPHFGGRNYYVEAVEQNITYARKVGVEGDTQLRRQPPQVL 735
            Y+ CDT YHD QHVLDVTLAMARL+ GY+R   G E ++A +F LG+I AL+HDCGYIR  +DTRH+NG E TLTHVSRGAR+LRDYLP+IGM ++A + A ++HFTGYEIP+ +I++P   ++++G+LLG+ADI+ QM+DRCYLEKC DRL+PEF+ GGI RRR   G E+V++ S  DL+ KTP FY  A+ RLD  L  A++YA+ HFGG++ Y+E + +NI +A+ +  EGD  L+R PP  +
Sbjct:   60 YHACDTAYHDIQHVLDVTLAMARLIDGYERGRIGVESIDASMFRLGVITALFHDCGYIRALDDTRHKNGGELTLTHVSRGARFLRDYLPKIGMGEVADIAAALIHFTGYEIPVSEIKVPSLAYKLLGSLLGSADIIAQMSDRCYLEKCRDRLYPEFLAGGITRRRLPDGREEVLYESGEDLVRKTPSFYQGASQRLDTDLGGAHKYAQDHFGGQHLYLEELTKNIDFAQAIDREGDAPLKRNPPNTI 306          
BLAST of mRNA_P-wetherbeei_contig18155.1.1 vs. uniprot
Match: A0A521XG07_9PROT (Uncharacterized protein n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A521XG07_9PROT)

HSP 1 Score: 308 bits (790), Expect = 3.120e-102
Identity = 145/248 (58.47%), Postives = 188/248 (75.81%), Query Frame = 1
Query:    1 YYPCDTGYHDTQHVLDVTLAMARLLHGYQRA--GREPLEARLFSLGIILALYHDCGYIRRRNDTRHENGAEYTLTHVSRGARYLRDYLPQIGMADLAKVGARVLHFTGYEIPIEKIRLPQPIFRVIGNLLGTADILGQMADRCYLEKCYDRLFPEFVLGGIARRRNGSGDEQVIFASATDLISKTPDFYATAAHRLDAVLESAYRYAEPHFGGRNYYVEAVEQNITYARKVGVEGDTQ-LRRQPPQVL 735
            Y+PCDT YHD QHVLDVTLAMARL+ GY+R+  G EP    LF LG+I AL+HD GY+R   D  H+NGAEYTLTHVSRG+ +L+DYLP+IGM ++A + A ++HFTGYE+P+ KI +P PI+R++G++LG+ADI+ QMADRCYLEKC DRL+PEFV GG+A +R+  G EQV+FAS  DL+ KTP F+  A  RLD  L   Y YA+ HFGG+N Y+E V +NI +A+     GDT  L+R+PP+ L
Sbjct:   60 YHPCDTAYHDVQHVLDVTLAMARLIDGYERSRVGTEPFGDSLFRLGVITALFHDMGYVRELKDREHKNGAEYTLTHVSRGSVFLKDYLPKIGMPEMADIAAELIHFTGYEMPVGKINVPSPIYRLLGSMLGSADIIAQMADRCYLEKCRDRLYPEFVAGGLATKRSPEGVEQVVFASGEDLVIKTPIFFRGATKRLDLDLGGCYSYAQQHFGGQNLYLEEVNKNINFAQGFSDAGDTAALKRKPPETL 307          
BLAST of mRNA_P-wetherbeei_contig18155.1.1 vs. uniprot
Match: A0A1P8FN35_9PROT (HDc domain-containing protein n=1 Tax=Betaproteobacteria bacterium GR16-43 TaxID=1904640 RepID=A0A1P8FN35_9PROT)

HSP 1 Score: 307 bits (787), Expect = 8.060e-102
Identity = 147/247 (59.51%), Postives = 186/247 (75.30%), Query Frame = 1
Query:    1 YYPCDTGYHDTQHVLDVTLAMARLLHGYQRA-GREPLEA-RLFSLGIILALYHDCGYIRRRNDTRHENGAEYTLTHVSRGARYLRDYLPQIGMADLAKVGARVLHFTGYEIPIEKIRLPQPIFRVIGNLLGTADILGQMADRCYLEKCYDRLFPEFVLGGIARRRNGSGDEQVIFASATDLISKTPDFYATAAHRLDAVLESAYRYAEPHFGGRNYYVEAVEQNITYARKVGVEGDTQLRRQPPQVL 735
            Y  CDT YHD QHVL+VTLAMARLL GY+R+ G  P  A +LF LG+I AL+HDCGYIR+R+D RH NGAEYT  HV+RGAR+L+ YLP IGM + A V   ++HFTGYE P+  IR+P PI+R++G+LLG+ADI+ QM+DRCYLEKC DRLFPEFV GGI +++ G G E VIFASA DL+ KTP FY  A+ RLD  L   Y+YA+ HFGG N Y++AV+QN+ +A ++G  G   L+R PP  +
Sbjct:   60 YAACDTDYHDLQHVLEVTLAMARLLDGYERSRGDGPAMADKLFQLGVICALFHDCGYIRKRSDKRHRNGAEYTTRHVTRGARFLKGYLPTIGMEEFADVAGSIVHFTGYERPVASIRVPAPIYRLVGSLLGSADIIAQMSDRCYLEKCRDRLFPEFVAGGITKKKTGDG-EIVIFASAEDLVRKTPSFYQNASRRLDTDLGGCYQYAKTHFGGTNLYMDAVQQNVRFAERLGPGGIASLKRHPPSTI 305          
BLAST of mRNA_P-wetherbeei_contig18155.1.1 vs. uniprot
Match: A0A6M4H596_9PROT (HDc domain-containing protein n=1 Tax=Usitatibacter palustris TaxID=2732487 RepID=A0A6M4H596_9PROT)

HSP 1 Score: 305 bits (781), Expect = 6.780e-101
Identity = 145/247 (58.70%), Postives = 186/247 (75.30%), Query Frame = 1
Query:    1 YYPCDTGYHDTQHVLDVTLAMARLLHGYQRAGRE--PLEARLFSLGIILALYHDCGYIRRRNDTRHENGAEYTLTHVSRGARYLRDYLPQIGMADLAKVGARVLHFTGYEIPIEKIRLPQPIFRVIGNLLGTADILGQMADRCYLEKCYDRLFPEFVLGGIARRRNGSGDEQVIFASATDLISKTPDFYATAAHRLDAVLESAYRYAEPHFGGRNYYVEAVEQNITYARKVGVEGDTQLRRQPPQVL 735
            Y  CDT YHD QH+L+VTLAMARLL GY+R+  +   +  RLF LG+I AL+HD GYIR+RND RH+ GAEYT  HVSRGAR+L+ YLP IG+ + A V   ++HFTGYE P+  IR+P PI++++G+LLG+ADI+ QM+DRCYLEKC DRLFPEFV GGI R++ G G E V+FASA DL+ KTP FY TA+ RLD  L  AY+YA+ HFGG N Y++AV+QNI +A ++G   +  LRR PP  +
Sbjct:   60 YTACDTEYHDLQHILEVTLAMARLLDGYERSRGDGAAIGERLFQLGVICALFHDVGYIRKRNDKRHKRGAEYTTRHVSRGARFLKGYLPTIGLDEFADVAGSIVHFTGYERPVSTIRVPAPIYKLLGSLLGSADIIAQMSDRCYLEKCRDRLFPEFVAGGITRKQTGKG-EIVVFASAEDLVRKTPAFYQTASRRLDVELGGAYQYAKTHFGGDNLYMDAVKQNIRFAERIGSANELTLRRHPPSTI 305          
BLAST of mRNA_P-wetherbeei_contig18155.1.1 vs. uniprot
Match: A0A1F3ZVM9_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_17 TaxID=1797484 RepID=A0A1F3ZVM9_9PROT)

HSP 1 Score: 301 bits (771), Expect = 2.720e-99
Identity = 144/250 (57.60%), Postives = 187/250 (74.80%), Query Frame = 1
Query:    1 YYPCDTGYHDTQHVLDVTLAMARLLHGYQRA--GREPLEARLFSLGIILALYHDCGYIRRRNDTRHENGAEYTLTHVSRGARYLRDYLPQIGMADLAKVGARVLHFTGYEIPIEKIRLPQPIFRVIGNLLGTADILGQMADRCYLEKCYDRLFPEFVLGGIARRRNGSGDEQVIFASATDLISKTPDFYATAAHRLDAVLESAYRYAEPHFGGRNYYVEAVEQNITYARKVGVEGD-TQLRRQPPQVLVS 741
            ++ CDT YHD QHVLDVTLAMARL+ GY+R   G +PL   LF LG+I AL+HD GYIRR  +T+ +NGAE+TL HVSRGA++L++YLP +GMAD+A V A ++HFTGYE P++ IR+P   +R++GN LG+ADI+ QMADRCYLEKC DRL+PEFV GG+A R+N  GD +VIF+S  DL+ KTP FYA A+ RL   L +   YAE HFGG+N Y+E  E+N+ +A  V  E D + L+R PP+ L S
Sbjct:   58 FHSCDTAYHDIQHVLDVTLAMARLIDGYERGRVGTDPLGKNLFQLGVITALFHDVGYIRRETETQTQNGAEFTLIHVSRGAQFLKEYLPSLGMADMADVAAELIHFTGYERPVKTIRVPSLRYRLLGNFLGSADIIAQMADRCYLEKCRDRLYPEFVTGGLATRKNAEGDLEVIFSSGEDLLKKTPGFYAGASRRLKEDLGNGLEYAETHFGGQNLYIEGAEKNMRFAEMVRDEDDFSLLKRAPPETLFS 307          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18155.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1F4BDV9_9PROT3.210e-10963.89Uncharacterized protein n=1 Tax=Betaproteobacteria... [more]
A0A0S8C4F2_9PROT1.500e-10762.31Uncharacterized protein n=1 Tax=Betaproteobacteria... [more]
A0A7C3NNW7_9PROT6.270e-10763.11Uncharacterized protein n=1 Tax=Betaproteobacteria... [more]
A0A6M4GUD0_9PROT6.050e-10460.32HDc domain-containing protein n=1 Tax=Usitatibacte... [more]
A0A536YTL5_9PROT6.420e-10358.47Uncharacterized protein n=7 Tax=Betaproteobacteria... [more]
A0A536SR08_9PROT2.350e-10257.09Uncharacterized protein n=2 Tax=Betaproteobacteria... [more]
A0A521XG07_9PROT3.120e-10258.47Uncharacterized protein n=2 Tax=unclassified Betap... [more]
A0A1P8FN35_9PROT8.060e-10259.51HDc domain-containing protein n=1 Tax=Betaproteoba... [more]
A0A6M4H596_9PROT6.780e-10158.70HDc domain-containing protein n=1 Tax=Usitatibacte... [more]
A0A1F3ZVM9_9PROT2.720e-9957.60Uncharacterized protein n=1 Tax=Betaproteobacteria... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18155contigP-wetherbeei_contig18155:2..775 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog391615.ABSJ01000026_gene121
Model size774
Max annot lvl1236|Gammaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.45e-74
EggNOG OGs2CIBN@1|root,2Z8JT@2|Bacteria,1R902@1224|Proteobacteria,1RXPM@1236|Gammaproteobacteria,1J8X1@118884|unclassified Gammaproteobacteria
DescriptionMetal dependent phosphohydrolases with conserved 'HD' motif.
Cds size774
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186137.605848-CDS-P-wetherbeei_contig18155:1..7751683186137.605848-CDS-P-wetherbeei_contig18155:1..775Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig18155 2..775 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18155.1.1prot_P-wetherbeei_contig18155.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig18155 2..775 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig18155.1.1

>prot_P-wetherbeei_contig18155.1.1 ID=prot_P-wetherbeei_contig18155.1.1|Name=mRNA_P-wetherbeei_contig18155.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=258bp
YYPCDTGYHDTQHVLDVTLAMARLLHGYQRAGREPLEARLFSLGIILALY
HDCGYIRRRNDTRHENGAEYTLTHVSRGARYLRDYLPQIGMADLAKVGAR
VLHFTGYEIPIEKIRLPQPIFRVIGNLLGTADILGQMADRCYLEKCYDRL
FPEFVLGGIARRRNGSGDEQVIFASATDLISKTPDFYATAAHRLDAVLES
AYRYAEPHFGGRNYYVEAVEQNITYARKVGVEGDTQLRRQPPQVLVSAQP
QPQLQLI*
back to top

mRNA from alignment at P-wetherbeei_contig18155:2..775+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig18155.1.1 ID=mRNA_P-wetherbeei_contig18155.1.1|Name=mRNA_P-wetherbeei_contig18155.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=774bp|location=Sequence derived from alignment at P-wetherbeei_contig18155:2..775+ (Phaeothamnion wetherbeei SAG_119_79)
TATTACCCCTGCGATACCGGTTACCACGATACCCAGCACGTGCTGGATGT CACGCTGGCAATGGCCCGGCTGCTCCACGGCTACCAGCGGGCGGGACGCG AGCCGCTGGAGGCGCGCCTCTTTTCCCTGGGCATCATACTGGCGCTTTAC CACGATTGCGGCTACATACGCCGCCGCAACGACACCCGCCACGAGAACGG CGCTGAATACACGCTGACCCACGTCTCGCGCGGCGCCCGCTACTTGCGCG ACTACCTGCCGCAGATCGGCATGGCCGACCTGGCGAAAGTCGGGGCCCGC GTATTGCATTTCACCGGTTACGAAATACCGATCGAGAAGATTCGCCTGCC GCAGCCGATATTCCGCGTCATCGGCAACCTGCTGGGCACCGCCGATATCC TGGGCCAGATGGCGGACCGCTGCTACCTCGAAAAATGTTACGACCGCCTG TTCCCCGAGTTCGTGCTGGGAGGCATTGCGCGGCGCCGGAACGGCAGCGG CGATGAGCAGGTGATATTCGCGTCCGCGACCGATCTCATTTCAAAAACGC CGGACTTTTACGCGACGGCGGCGCACCGGCTCGACGCGGTGCTGGAGTCG GCTTACCGTTACGCCGAGCCGCATTTCGGCGGCCGCAATTACTACGTCGA AGCGGTCGAGCAGAACATTACTTATGCCCGCAAGGTCGGCGTCGAGGGCG ATACGCAACTGCGCCGCCAGCCGCCGCAGGTGCTGGTCTCCGCGCAGCCG CAGCCGCAGTTGCAGTTGATCTAG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig18155:2..775+

>mRNA_P-wetherbeei_contig18155.1.1 ID=mRNA_P-wetherbeei_contig18155.1.1|Name=mRNA_P-wetherbeei_contig18155.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=774bp|location=Sequence derived from alignment at P-wetherbeei_contig18155:2..775+ (Phaeothamnion wetherbeei SAG_119_79)
TATTACCCCTGCGATACCGGTTACCACGATACCCAGCACGTGCTGGATGT
CACGCTGGCAATGGCCCGGCTGCTCCACGGCTACCAGCGGGCGGGACGCG
AGCCGCTGGAGGCGCGCCTCTTTTCCCTGGGCATCATACTGGCGCTTTAC
CACGATTGCGGCTACATACGCCGCCGCAACGACACCCGCCACGAGAACGG
CGCTGAATACACGCTGACCCACGTCTCGCGCGGCGCCCGCTACTTGCGCG
ACTACCTGCCGCAGATCGGCATGGCCGACCTGGCGAAAGTCGGGGCCCGC
GTATTGCATTTCACCGGTTACGAAATACCGATCGAGAAGATTCGCCTGCC
GCAGCCGATATTCCGCGTCATCGGCAACCTGCTGGGCACCGCCGATATCC
TGGGCCAGATGGCGGACCGCTGCTACCTCGAAAAATGTTACGACCGCCTG
TTCCCCGAGTTCGTGCTGGGAGGCATTGCGCGGCGCCGGAACGGCAGCGG
CGATGAGCAGGTGATATTCGCGTCCGCGACCGATCTCATTTCAAAAACGC
CGGACTTTTACGCGACGGCGGCGCACCGGCTCGACGCGGTGCTGGAGTCG
GCTTACCGTTACGCCGAGCCGCATTTCGGCGGCCGCAATTACTACGTCGA
AGCGGTCGAGCAGAACATTACTTATGCCCGCAAGGTCGGCGTCGAGGGCG
ATACGCAACTGCGCCGCCAGCCGCCGCAGGTGCTGGTCTCCGCGCAGCCG
CAGCCGCAGTTGCAGTTGATCTAG
back to top