mRNA_P-wetherbeei_contig18154.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig18154.1.1 vs. uniprot
Match: K3X7U1_GLOUD (PHD-type domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X7U1_GLOUD) HSP 1 Score: 70.5 bits (171), Expect = 1.980e-10 Identity = 36/64 (56.25%), Postives = 44/64 (68.75%), Query Frame = 3
Query: 138 KGVLMTINPD--DDLAYCAVCDNGDSLETDAIVICELCNVATHQSCYGIEVVPPGEEPWLCNRC 323
K ++T PD DD+A C+VC GDS E DAIVICELCN A HQ+CY IE +P E+ W C+ C
Sbjct: 136 KKAIVTAAPDAEDDVA-CSVCFEGDSTEGDAIVICELCNTAVHQTCYRIEYLP--EDDWYCHPC 196
BLAST of mRNA_P-wetherbeei_contig18154.1.1 vs. uniprot
Match: A0A8C4R743_EPTBU (Bromodomain and PHD finger containing, 1 n=2 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4R743_EPTBU) HSP 1 Score: 70.9 bits (172), Expect = 5.090e-10 Identity = 28/67 (41.79%), Postives = 42/67 (62.69%), Query Frame = 3
Query: 141 GVLMTINPDDDLAYCAVCDNGDSLETDAIVICELCNVATHQSCYGIEVVPPGEEPWLCNRCRAGVSQ 341
G + DDD A C +C++G+ ++AI+ C++CN+A HQ CYG+ +P G PWLC RC S+
Sbjct: 298 GATASAPQDDDDAVCCICNDGECQSSNAILFCDMCNLAVHQECYGVPYIPEG--PWLCRRCLQSPSR 362
BLAST of mRNA_P-wetherbeei_contig18154.1.1 vs. uniprot
Match: A0A1E3Q7B0_LIPST (Uncharacterized protein n=1 Tax=Lipomyces starkeyi NRRL Y-11557 TaxID=675824 RepID=A0A1E3Q7B0_LIPST) HSP 1 Score: 69.7 bits (169), Expect = 1.070e-9 Identity = 29/65 (44.62%), Postives = 45/65 (69.23%), Query Frame = 3
Query: 135 QKGVLMTINPDDDLAYCAVCDNGDSLETDAIVICELCNVATHQSCYGIEVVPPGEEPWLCNRCRA 329
+ V+ +N +DD + CA+CD+G+ ++AIV C+ CNVA HQ CYG+ +P G+ WLC RC++
Sbjct: 259 KSAVIDALNENDD-SKCAICDDGECENSNAIVFCDGCNVAVHQDCYGVPFIPEGQ--WLCRRCQS 320
BLAST of mRNA_P-wetherbeei_contig18154.1.1 vs. uniprot
Match: A0A3S3P4G1_9ACAR (Peregrin-like isoform X10 n=1 Tax=Dinothrombium tinctorium TaxID=1965070 RepID=A0A3S3P4G1_9ACAR) HSP 1 Score: 69.3 bits (168), Expect = 1.670e-9 Identity = 30/78 (38.46%), Postives = 47/78 (60.26%), Query Frame = 3
Query: 108 YFLRKPYGEQKGVLMTINPDDDLAYCAVCDNGDSLETDAIVICELCNVATHQSCYGIEVVPPGEEPWLCNRCRAGVSQ 341
YFL + G+ G + D+ A C +C++G+ T+AI+ C++CN+A HQ CYG+ +P G+ WLC RC S+
Sbjct: 261 YFLSQNSGKDMGPAI-----DEDAVCCICNDGECQNTNAILFCDMCNLAVHQECYGVPYIPEGQ--WLCRRCLQSPSR 331
BLAST of mRNA_P-wetherbeei_contig18154.1.1 vs. uniprot
Match: A0A2P6VAH8_9CHLO (Peregrin isoform X2 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VAH8_9CHLO) HSP 1 Score: 69.3 bits (168), Expect = 1.770e-9 Identity = 37/79 (46.84%), Postives = 47/79 (59.49%), Query Frame = 3
Query: 144 VLMTINPDDDLAYCAVCDNGDSLETDAIVICELCNVATHQSCYGIEVVPPGEEPWLCNRCRA--------GVSQGKQHP 356
VL +PD + A+CAVC +G S + IV CE C+VA HQ+CYGI VVP GE WLC C+ G+ QG+ P
Sbjct: 795 VLAQRDPDQE-AFCAVCGDGTSEPPNQIVFCERCDVAVHQNCYGIAVVPEGE--WLCEPCKQYEEVMKAQGMPQGELRP 870
BLAST of mRNA_P-wetherbeei_contig18154.1.1 vs. uniprot
Match: A0A443SUF3_9ACAR (Peregrin-like isoform X11 n=1 Tax=Leptotrombidium deliense TaxID=299467 RepID=A0A443SUF3_9ACAR) HSP 1 Score: 68.9 bits (167), Expect = 2.230e-9 Identity = 30/78 (38.46%), Postives = 47/78 (60.26%), Query Frame = 3
Query: 108 YFLRKPYGEQKGVLMTINPDDDLAYCAVCDNGDSLETDAIVICELCNVATHQSCYGIEVVPPGEEPWLCNRCRAGVSQ 341
YFL + G+ G + D+ A C +C++G+ T+AI+ C++CN+A HQ CYG+ +P G+ WLC RC S+
Sbjct: 269 YFLSQNSGKDVGPAI-----DEDAVCCICNDGECQNTNAILFCDMCNLAVHQECYGVPYIPEGQ--WLCRRCLQSPSR 339
BLAST of mRNA_P-wetherbeei_contig18154.1.1 vs. uniprot
Match: U6GYK4_EIMAC (PHD-finger domain-containing protein, putative n=1 Tax=Eimeria acervulina TaxID=5801 RepID=U6GYK4_EIMAC) HSP 1 Score: 68.2 bits (165), Expect = 2.460e-9 Identity = 34/80 (42.50%), Postives = 48/80 (60.00%), Query Frame = 3
Query: 93 RRVGKYFLRKPYGEQKGVLMTINPD--DDLAYCAVCDNGDSLETDAIVICELCNVATHQSCYGIEVVPPGEEPWLCNRCR 326
RR+ + L++ GEQ+ + + ++ D DD C VC N D+ DAIV+C+ C+ A HQSCY I +P GE W C CR
Sbjct: 30 RRLSRVALKQRLGEQRKLWIHLSEDLQDDGIRCDVCANSDTSADDAIVLCDGCDAAVHQSCYNIGALPEGE--WFCEYCR 107
BLAST of mRNA_P-wetherbeei_contig18154.1.1 vs. uniprot
Match: A0A7S0LKH8_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LKH8_9EUKA) HSP 1 Score: 67.0 bits (162), Expect = 2.630e-9 Identity = 29/68 (42.65%), Postives = 43/68 (63.24%), Query Frame = 3
Query: 168 DDLAYCAVCDNGDSLETDAIVICELCNVATHQSCYGIEV--VPPGEEPWLCNRCRAGVSQGKQHPEEE 365
+DLA CAVC+ GD + +AI+ C+ C++A HQ CYG +P G+ PW C+ CR +G + E+E
Sbjct: 67 EDLARCAVCNEGDWEDDNAIIFCDSCDLAVHQVCYGAGARNIPKGDVPWYCDVCRHTGKRGDRRCEQE 134
BLAST of mRNA_P-wetherbeei_contig18154.1.1 vs. uniprot
Match: A0A1Y1YDQ9_9FUNG (PHD-type domain-containing protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YDQ9_9FUNG) HSP 1 Score: 65.9 bits (159), Expect = 2.780e-9 Identity = 24/53 (45.28%), Postives = 34/53 (64.15%), Query Frame = 3
Query: 165 DDDLAYCAVCDNGDSLETDAIVICELCNVATHQSCYGIEVVPPGEEPWLCNRC 323
+ D + C +C D + +AIV C+ C++ HQ CYGI+VVPPG + W C RC
Sbjct: 21 ESDESSCVICGGEDGSKKNAIVFCDGCDIPVHQKCYGIDVVPPGNQKWFCQRC 73
BLAST of mRNA_P-wetherbeei_contig18154.1.1 vs. uniprot
Match: F4NXU9_BATDJ (PHD-type domain-containing protein n=2 Tax=Batrachochytrium dendrobatidis TaxID=109871 RepID=F4NXU9_BATDJ) HSP 1 Score: 67.8 bits (164), Expect = 4.950e-9 Identity = 28/54 (51.85%), Postives = 37/54 (68.52%), Query Frame = 3
Query: 180 YCAVCDNGDSLETDAIVIC--ELCNVATHQSCYGIEVVPPGEEPWLCNRCRAGV 335
+CA+C S + + IV+C E C+V HQ CYGI+VVPPG+E W C+RC GV
Sbjct: 135 FCAICGRAYSPKANCIVLCDGENCDVPVHQKCYGIDVVPPGDEKWFCHRCADGV 188 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18154.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig18154.1.1 >prot_P-wetherbeei_contig18154.1.1 ID=prot_P-wetherbeei_contig18154.1.1|Name=mRNA_P-wetherbeei_contig18154.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=96bp MTINPDDDLAYCAVCDNGDSLETDAIVICELCNVATHQSCYGIEVVPPGEback to top mRNA from alignment at P-wetherbeei_contig18154:322..1375- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig18154.1.1 ID=mRNA_P-wetherbeei_contig18154.1.1|Name=mRNA_P-wetherbeei_contig18154.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1054bp|location=Sequence derived from alignment at P-wetherbeei_contig18154:322..1375- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig18154:322..1375- >mRNA_P-wetherbeei_contig18154.1.1 ID=mRNA_P-wetherbeei_contig18154.1.1|Name=mRNA_P-wetherbeei_contig18154.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=288bp|location=Sequence derived from alignment at P-wetherbeei_contig18154:322..1375- (Phaeothamnion wetherbeei SAG_119_79)back to top |