mRNA_P-wetherbeei_contig18146.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig18146.2.1 vs. uniprot
Match: A0A6A8MTL0_9ACTN (Uncharacterized protein n=4 Tax=root TaxID=1 RepID=A0A6A8MTL0_9ACTN) HSP 1 Score: 120 bits (300), Expect = 1.740e-30 Identity = 60/112 (53.57%), Postives = 75/112 (66.96%), Query Frame = 1
Query: 172 GVVLKKDEVAYGSIQGAALIEPRRTPGQWTGGSKGVSFRIAKGVTYRVGNTRGTYAQGEERPTPVDTGLFVVTNQRCIFIGGKRSTEWAYAKLLGFSLDG-EAVAMFNVSNR 504
G+VLKK EV G + AALIEPRR PG + GG +G SFR+AKGV Y VG +RGTY QG E PT VD G V+TNQR +F G + EWA++K+LG + + + VSNR
Sbjct: 70 GIVLKKGEVLVGVYEKAALIEPRRQPGHYAGGYQGFSFRLAKGVRYNVGGSRGTYVQGNELPTAVDFGRLVITNQRVVFQGANNAREWAFSKMLGMTHNEVNPTTVMAVSNR 181
BLAST of mRNA_P-wetherbeei_contig18146.2.1 vs. uniprot
Match: UPI001895AEE3 (hypothetical protein n=1 Tax=Nocardia blacklockiae TaxID=480036 RepID=UPI001895AEE3) HSP 1 Score: 108 bits (269), Expect = 9.390e-26 Identity = 57/113 (50.44%), Postives = 75/113 (66.37%), Query Frame = 1
Query: 172 GVVLKKDEVAYGSIQGAALIEPRRTPGQWTGGSKGVSFRIAKGVTYRVGNTRGTYAQGEERPTPVDTGLFVVTNQRCIFIGGKRSTEWAYAKLLGFSLD--GEAVAMFNVSNR 504
GV+LKK E A +++ ALIEPRR PG +T G GVS RIA+GV Y VG +RG Y G E TP+D+G V+T R IF G +++ EW ++KLLG G+AV + +VSNR
Sbjct: 86 GVLLKKGETALWAVESVALIEPRRHPGTYTRGYSGVSVRIARGVRYHVGGSRGRYIPGPELQTPIDSGQAVITTSRVIFKGFQKTREWHFSKLLGIDTSPAGDAV-LLHVSNR 197
BLAST of mRNA_P-wetherbeei_contig18146.2.1 vs. uniprot
Match: UPI001F0752E5 (DUF4429 domain-containing protein n=1 Tax=unclassified Streptomyces TaxID=2593676 RepID=UPI001F0752E5) HSP 1 Score: 108 bits (270), Expect = 4.230e-25 Identity = 73/165 (44.24%), Postives = 99/165 (60.00%), Query Frame = 1
Query: 25 KQAKAAREADRAAAVHQQRIAAKEWEMRQAYDALEASKLTDENGPPRIPG---VVLKKDEVAYGSIQGAALIEPRRTPGQWTGGSKGVSFRIAKGVTYRVGNTRGTYAQGEERPTPVDTGLFVVTNQRCIFIGGKRSTEWAYAKLLGFSL--DGEAVAMFNVSNR 504
K+ +AAR AD+ +++ +AA WE QA + G R+ ++LKK+E A + Q A+L+EPRR PG ++GGS GVS RIAKGV+YR+G + +Y G E TPVD G +VT QR +F G K S EW +AKLLG + DG V + VSNR
Sbjct: 158 KERRAARRADKN---YEKALAA--WEREQALLDEATTAALGAAGASRVIASGLIILKKNEAALWTGQ-ASLVEPRRQPGYYSGGSVGVSLRIAKGVSYRIGASSRSYTPGPEIQTPVDQGSIIVTTQRVVFKGTKASREWVFAKLLGVDIAADGTGV-LLPVSNR 315
BLAST of mRNA_P-wetherbeei_contig18146.2.1 vs. uniprot
Match: A0A378YS12_9NOCA (Uncharacterized protein n=4 Tax=Nocardia otitidiscaviarum TaxID=1823 RepID=A0A378YS12_9NOCA) HSP 1 Score: 105 bits (263), Expect = 6.790e-25 Identity = 58/113 (51.33%), Postives = 74/113 (65.49%), Query Frame = 1
Query: 172 GVVLKKDEVAYGSIQGAALIEPRRTPGQWTGGSKGVSFRIAKGVTYRVGNTRGTYAQGEERPTPVDTGLFVVTNQRCIFIGGKRSTEWAYAKLLGF--SLDGEAVAMFNVSNR 504
GV+LKK E A + + ALIEPRR PG ++ G GVS RIA+GV Y VG +RG Y G E TP+D+G V+T R +F G K + EW + KLLG S DG+AV + +VSNR
Sbjct: 83 GVLLKKGESALWAAEAVALIEPRRHPGTYSRGYSGVSVRIARGVRYHVGGSRGRYLPGPELQTPIDSGQAVLTTSRVVFKGFKMTREWRFDKLLGIDTSPDGDAV-LLHVSNR 194
BLAST of mRNA_P-wetherbeei_contig18146.2.1 vs. uniprot
Match: A0A515Y179_9ACTN (DUF4429 domain-containing protein n=1 Tax=Streptomyces sp. RLB3-6 TaxID=2594457 RepID=A0A515Y179_9ACTN) HSP 1 Score: 108 bits (270), Expect = 1.810e-24 Identity = 73/165 (44.24%), Postives = 99/165 (60.00%), Query Frame = 1
Query: 25 KQAKAAREADRAAAVHQQRIAAKEWEMRQAYDALEASKLTDENGPPRIPG---VVLKKDEVAYGSIQGAALIEPRRTPGQWTGGSKGVSFRIAKGVTYRVGNTRGTYAQGEERPTPVDTGLFVVTNQRCIFIGGKRSTEWAYAKLLGFSL--DGEAVAMFNVSNR 504
K+ +AAR AD+ +++ +AA WE QA + G R+ ++LKK+E A + Q A+L+EPRR PG ++GGS GVS RIAKGV+YR+G + +Y G E TPVD G +VT QR +F G K S EW +AKLLG + DG V + VSNR
Sbjct: 327 KERRAARRADKN---YEKALAA--WEREQALLDEATTAALGAAGASRVIASGLIILKKNEAALWTGQ-ASLVEPRRQPGYYSGGSVGVSLRIAKGVSYRIGASSRSYTPGPEIQTPVDQGSIIVTTQRVVFKGTKASREWVFAKLLGVDIAADGTGV-LLPVSNR 484
BLAST of mRNA_P-wetherbeei_contig18146.2.1 vs. uniprot
Match: A0A6I3D2F8_9ACTN (Uncharacterized protein n=4 Tax=root TaxID=1 RepID=A0A6I3D2F8_9ACTN) HSP 1 Score: 103 bits (256), Expect = 5.600e-24 Identity = 53/111 (47.75%), Postives = 69/111 (62.16%), Query Frame = 1
Query: 175 VVLKKDEVAYGSIQGAALIEPRRTPGQWTGGSKGVSFRI-AKGVTYRVGNTRGTYAQGEERPTPVDTGLFVVTNQRCIFIGGKRSTEWAYAKLLGFSLDGEAVAMFNVSNR 504
VV+K E Y + A L+EPR+ PGQW G S+G+S I + YRVG ++G++ QGEE PTP+DTG F VT+ R IF G K S EWA++KLL + VSNR
Sbjct: 70 VVVKAGESIYCHVTDAVLVEPRKGPGQWKGRSQGISMPIPGTRLRYRVGASKGSFQQGEETPTPIDTGTFTVTSTRAIFAGQKHSREWAWSKLLSVTNYDPGWTAMAVSNR 180
BLAST of mRNA_P-wetherbeei_contig18146.2.1 vs. uniprot
Match: A0A6J7LGE1_9ZZZZ (Unannotated protein n=2 Tax=freshwater metagenome TaxID=449393 RepID=A0A6J7LGE1_9ZZZZ) HSP 1 Score: 102 bits (254), Expect = 1.130e-23 Identity = 51/111 (45.95%), Postives = 70/111 (63.06%), Query Frame = 1
Query: 175 VVLKKDEVAYGSIQGAALIEPRRTPGQWTGGSKGVSFRI-AKGVTYRVGNTRGTYAQGEERPTPVDTGLFVVTNQRCIFIGGKRSTEWAYAKLLGFSLDGEAVAMFNVSNR 504
+V+K E Y + A L+EP++ PGQW G S+G+S I + YRVG ++GT+ QGEE+PTP+DTG F VT+ R IF G K+S EW ++KLL + VSNR
Sbjct: 70 IVVKAGESIYCHVTDAVLVEPKKGPGQWNGRSQGLSMPIPGTRLRYRVGASKGTFEQGEEKPTPIDTGTFTVTSTRAIFAGQKQSREWPWSKLLSVTHYDPGWTAMAVSNR 180
BLAST of mRNA_P-wetherbeei_contig18146.2.1 vs. uniprot
Match: A0A060JJZ0_9MICO (Uncharacterized protein n=3 Tax=Rhodoluna lacicola TaxID=529884 RepID=A0A060JJZ0_9MICO) HSP 1 Score: 87.0 bits (214), Expect = 6.220e-18 Identity = 51/124 (41.13%), Postives = 72/124 (58.06%), Query Frame = 1
Query: 136 KLTDENGPPRIPGVVLKKDEVAYGSIQGAALIEPRRTPGQWTGGSKGVSFRIAKGVTYRVGNTRGTYAQGEERPTPVDTGLFVVTNQRCIFIGGKRSTEWAYAKLLGFSL-DGEAVAMFNVSNR 504
K ++ P + +LKK EVA S+ A L+E R T + GGS+GVS RIAKG++YRVG RG + + + +D+G TNQR +F G + EWA+ KL+ F+ D M +VSNR
Sbjct: 49 KKLEDGVPAGLVQTMLKKGEVAIDSVP-AKLLEYRSTGSSYQGGSQGVSIRIAKGLSYRVGANRGQLVRNPDALSVIDSGDATFTNQRVVFGGQAHTREWAFDKLVDFNAGDNGTQVMISVSNR 171
BLAST of mRNA_P-wetherbeei_contig18146.2.1 vs. uniprot
Match: A0A6I3DWB6_9ACTN (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6I3DWB6_9ACTN) HSP 1 Score: 87.0 bits (214), Expect = 9.590e-18 Identity = 50/123 (40.65%), Postives = 68/123 (55.28%), Query Frame = 1
Query: 139 LTDENGPPRIPGVVLKKDEVAYGSIQGAALIEPRRTPGQWTGGSKGVSFRIAKGVTYRVGNTRGTYAQGEERPTPVDTGLFVVTNQRCIFIGGKRSTEWAYAKLLGFSLDGEAVAM-FNVSNR 504
L+ E G IPG +K E + AAL E R T + GS+G+SFRIAKGV YRVG ++G + E+ T +D G TN+R F+G + EW ++KLL S+ V + VSNR
Sbjct: 68 LSQELGNLEIPGFTAEKGETPIYKLSRAALTEFRSTGSSFQSGSQGLSFRIAKGVNYRVGASKGQLLKNPEQLTVIDEGSVTFTNKRIFFVGSNVNREWDFSKLLDVSVGANGVYVNLAVSNR 190
BLAST of mRNA_P-wetherbeei_contig18146.2.1 vs. uniprot
Match: UPI000AB2B4F5 (DUF4429 domain-containing protein n=1 Tax=Streptomyces sp. WM6378 TaxID=1415557 RepID=UPI000AB2B4F5) HSP 1 Score: 89.4 bits (220), Expect = 1.090e-17 Identity = 52/111 (46.85%), Postives = 69/111 (62.16%), Query Frame = 1
Query: 178 VLKKDEVAYGSIQGAALIEPRRTPGQWTGGSKGVSFRIAKGVTYRVGNTRGTYAQGEERPTPVDTGLFVVTNQRCIFIGGKRSTEWAYAKLLGF--SLDGEAVAMFNVSNR 504
+LK +E + Q +L+EPRR PG ++GGS GV IAKGV+ RVG + Y G E TPVD G +VT QR +F G S EW ++KLLG + DG++V + VSNR
Sbjct: 336 ILKANETVLWTGQ-TSLVEPRRRPGHYSGGSSGVRVGIAKGVSVRVGASSRHYVPGPEVQTPVDRGSAMVTTQRVVFKGTHTSREWTFSKLLGVENATDGKSV-LLPVSNR 444 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18146.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig18146.2.1 >prot_P-wetherbeei_contig18146.2.1 ID=prot_P-wetherbeei_contig18146.2.1|Name=mRNA_P-wetherbeei_contig18146.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=166bp MAFEKMKQAKAAREADRAAAVHQQRIAAKEWEMRQAYDALEASKLTDENGback to top mRNA from alignment at P-wetherbeei_contig18146:872..1375+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig18146.2.1 ID=mRNA_P-wetherbeei_contig18146.2.1|Name=mRNA_P-wetherbeei_contig18146.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=504bp|location=Sequence derived from alignment at P-wetherbeei_contig18146:872..1375+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig18146:872..1375+ >mRNA_P-wetherbeei_contig18146.2.1 ID=mRNA_P-wetherbeei_contig18146.2.1|Name=mRNA_P-wetherbeei_contig18146.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=498bp|location=Sequence derived from alignment at P-wetherbeei_contig18146:872..1375+ (Phaeothamnion wetherbeei SAG_119_79)back to top |