mRNA_P-wetherbeei_contig18142.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig18142.1.1
Unique NamemRNA_P-wetherbeei_contig18142.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig18142.1.1 vs. uniprot
Match: A0A7X8XXP2_9BURK (UvrABC system protein A n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X8XXP2_9BURK)

HSP 1 Score: 496 bits (1278), Expect = 1.250e-165
Identity = 243/356 (68.26%), Postives = 291/356 (81.74%), Query Frame = 1
Query:    7 IRGAREHNLKNVSIDLPRDRLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLGLMEKPDVDLIEGLSPAISIDQKGTSRNPRSTVGTVTEIYDYLRLLFARIGKPHCPKCDRPIHSQSVDQMVDHLSASGEGAQITLLAPVVRGRKGEYTKLLKEIRAQGFTRVRVDGDMMRIDE-DEIVLERYVKHSIEVAVDRMTMREGVRSRLAESLETAMGLSNGLVLAQITLNGKTDEHLMSAHLACPECGISFEELAPRLFSFNSPHGACAQCSGLGFQPEMDPTLVIPDLNLSINDGALAPWGKPINSPRYHVRESRFWKRLQRMASERGVSLKQPWARLSPEHQKLVLYG 1071
            IRGAREHNLKN+ +DLPRDRL+VITG+SGSGKSSLAFDT+YAEGQRRYVESLS+YARQFLG MEKPDVD IEGLSPAISIDQKG SRNPRSTVGTVTEIYDYLRLL+AR+G PHCP+C R I  Q++DQMVD + A  EG ++ LLAP+VRGRKG Y KL +EIR +GFTR RVDG+++R+DE +++VLERYV+H IEV VDR+ ++ G R R+AESLET +GLS G  L    ++G   E L+S HLAC ECG+SF ELAPRLFSFN+PHGAC  C+GLGF PE+DP LV+PD +LS   GALAPWGKPI S R+H RES FW+R++R+A   G+ L+ PW  L   H+ L+LYG
Sbjct:    8 IRGAREHNLKNIDLDLPRDRLIVITGISGSGKSSLAFDTIYAEGQRRYVESLSSYARQFLGQMEKPDVDDIEGLSPAISIDQKGASRNPRSTVGTVTEIYDYLRLLYARVGHPHCPQCGRNIEPQTIDQMVDKVLALPEGTRLMLLAPLVRGRKGHYQKLFREIRDKGFTRARVDGELIRVDEAEDVVLERYVQHDIEVVVDRIVVKAGGRQRIAESLETTLGLSGGTALLA-EVDGP--EQLLSQHLACAECGLSFSELAPRLFSFNTPHGACPGCTGLGFMPEVDPNLVVPDTSLSCLQGALAPWGKPIYSFRHHPRESWFWRRVERVAEHVGIDLELPWKNLPEAHRNLLLYG 360          
BLAST of mRNA_P-wetherbeei_contig18142.1.1 vs. uniprot
Match: A0A7C6W928_9FIRM (Excinuclease ABC subunit UvrA (Fragment) n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A7C6W928_9FIRM)

HSP 1 Score: 426 bits (1096), Expect = 3.880e-144
Identity = 215/355 (60.56%), Postives = 274/355 (77.18%), Query Frame = 1
Query:    7 IRGAREHNLKNVSIDLPRDRLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLGLMEKPDVDLIEGLSPAISIDQKGTSRNPRSTVGTVTEIYDYLRLLFARIGKPHCPKCDRPIHSQSVDQMVDHLSASGEGAQITLLAPVVRGRKGEYTKLLKEIRAQGFTRVRVDGDMMRIDEDEIVLERYVKHSIEVAVDRMTMREGVRSRLAESLETAMGLSNGLVLAQITLNGKTDEHLMSAHLACPECGISFEELAPRLFSFNSPHGACAQCSGLGFQPEMDPTLVIPDLNLSINDGALAPWGKPINSPRYHVRESRFWKRLQRMASERGVSLKQPWARLSPEHQKLVLYG 1071
            ++GAR+HNLKN+ +D+PRD+LVVITGLSGSGKSSLAFDT+YAEGQRRYVESLSAYARQFLG M+KPDVD IEGLSPA+SIDQK TS+NPRSTVGTVTEIYDYLRLLFAR+G+PHCP C   I  Q++DQMVD + A  EG +  +L+P+VRGRKGE+ K+L ++R QGF RVR+DG+   +D   I LE+  KH+IEV VDR+ +REG+R RLA+SLE A+GL+ GL + Q+    +  E + S +LAC  CG S EEL+PRLFSFNSP+GAC+ C+GLGF+ E+DP LVIPD N S+ +GA+APW +  N   Y+ +       L+ +A + G S   P ++LS E  ++VLYG
Sbjct:    8 VKGARQHNLKNIDVDIPRDKLVVITGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLGQMDKPDVDYIEGLSPAVSIDQKTTSKNPRSTVGTVTEIYDYLRLLFARVGQPHCPNCGELISRQTIDQMVDQVLALPEGTRFQVLSPLVRGRKGEHKKVLADLRKQGFVRVRIDGETRELDPG-IELEKNKKHTIEVVVDRIIVREGIRKRLADSLELALGLAGGLAVVQLV--DEERELVFSQNLACTNCGFSLEELSPRLFSFNSPYGACSYCTGLGFRMEVDPELVIPDRNKSLAEGAIAPWSRSHN---YYPQI------LEAVAKKYGFSTGVPVSQLSEEALRIVLYG 350          
BLAST of mRNA_P-wetherbeei_contig18142.1.1 vs. uniprot
Match: A0A538DIF2_9ACTN (Excinuclease ABC subunit UvrA (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538DIF2_9ACTN)

HSP 1 Score: 419 bits (1077), Expect = 4.750e-143
Identity = 216/357 (60.50%), Postives = 270/357 (75.63%), Query Frame = 1
Query:    7 IRGAREHNLKNVSIDLPRDRLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLGLMEKPDVDLIEGLSPAISIDQKGTSRNPRSTVGTVTEIYDYLRLLFARIGKPHCPKCDRPIHSQSVDQMVDHLSASGEGAQITLLAPVVRGRKGEYTKLLKEIRAQGFTRVRVDGDMMRIDEDEIVLERYVKHSIEVAVDRMTMREGVRSRLAESLETAMGLSNGLVLAQITLNGKTDEHLMSAHLACPECGISFEELAPRLFSFNSPHGACAQCSGLGFQPEMDPTLVIPDLNLSINDGALAPWGKPINSPRYHVRESRFWKRLQRMASERGVSLKQPWARLSPEHQKLVLYGDD 1077
            I GAREHNLK++ + LPR++LV ITGLSGSGKSSLAFDT+YAEGQRRYVESLSAYARQFL +MEKPDVD IEGLSPAISIDQK TSRNPRSTVGTVTEIYDYLRLL+ARIG+PHCP C RPI  QS++ +VD +    EG + T+ APVVR RKGEY  + +E+RA GFTRV+VDG++ R+ E+EIVL++  KH+IEV VDR+ M+  +R+RLA+S+ETA+ L+ GLV+  I ++G  +E   S   ACPE G+S  EL PR+FSFNSPHGAC +C+GLG Q E+DP L++PD  LSI +GAL PW    +S    V        +Q +A +  + L +PW  L+ + Q L LYG D
Sbjct:    8 IHGAREHNLKDIDVRLPRNKLVTITGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLQMMEKPDVDSIEGLSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLYARIGRPHCPICGRPIAGQSIEAIVDQVLRLEEGTKFTVNAPVVRDRKGEYKDVFEELRADGFTRVKVDGEL-RLLEEEIVLDKKFKHTIEVVVDRLVMKPDLRTRLAQSIETAISLAEGLVVIDI-VDG--EELTFSERFACPEHGVSLPELQPRIFSFNSPHGACPRCTGLGAQQEIDPDLLVPDPTLSIGEGALVPWSTGSSSFYEAV--------IQGIADKWEIDLDKPWQELTADEQDLFLYGTD 352          
BLAST of mRNA_P-wetherbeei_contig18142.1.1 vs. uniprot
Match: A0A7C3H919_9BACT (Excinuclease ABC subunit UvrA (Fragment) n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A7C3H919_9BACT)

HSP 1 Score: 421 bits (1082), Expect = 7.050e-143
Identity = 212/355 (59.72%), Postives = 271/355 (76.34%), Query Frame = 1
Query:    7 IRGAREHNLKNVSIDLPRDRLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLGLMEKPDVDLIEGLSPAISIDQKGTSRNPRSTVGTVTEIYDYLRLLFARIGKPHCPKCDRPIHSQSVDQMVDHLSASGEGAQITLLAPVVRGRKGEYTKLLKEIRAQGFTRVRVDGDMMRIDEDEIVLERYVKHSIEVAVDRMTMREGVRSRLAESLETAMGLSNGLVLAQITLNGKTDEHLMSAHLACPECGISFEELAPRLFSFNSPHGACAQCSGLGFQPEMDPTLVIPDLNLSINDGALAPWGKPINSPRYHVRESRFWKRLQRMASERGVSLKQPWARLSPEHQKLVLYG 1071
            IRGAREHNLKN+ +++PRDR VVITGLSGSGKSSLAFDT+YAEGQRRYVESLSAYARQFLGLMEKPDVD IEGLSPAISI Q+  S+NPRSTVGTVTEIYDYLRLLFARIG P+C KC + +  Q+V+Q+VD + A G+G ++ +LAPVVRGRKGEY ++ +E R  GF RVRVDG+++ +D  EI L++  KH+IE+ VDR+ + E VR RLA+S+ETA+ L++GLV+  +  +    E L S H AC ECGIS+EE+ PR+FSFNSP+GAC +C+GLG Q  +DP LV+P+  L++  GALAPWG+        VR+  +   L+ +A   G SL  PW  L  + + ++LYG
Sbjct:   10 IRGAREHNLKNIDVEIPRDRFVVITGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLGLMEKPDVDYIEGLSPAISIQQRTVSKNPRSTVGTVTEIYDYLRLLFARIGVPYCYKCGKRLEKQTVEQIVDAVLALGDGTRVQVLAPVVRGRKGEYREIFEEARRDGFVRVRVDGEVLDLD-SEIRLDKNKKHNIEIVVDRLVVAEKVRKRLADSIETALNLASGLVVIDVVGDR---EMLFSEHYACVECGISYEEIEPRMFSFNSPYGACRECNGLGTQMVVDPELVVPNPRLTLRQGALAPWGE--------VRDGWYATLLKGVADHYGFSLDTPWEELPEKIRHVLLYG 352          
BLAST of mRNA_P-wetherbeei_contig18142.1.1 vs. uniprot
Match: A0A7V9M8A2_9ACTN (Excinuclease ABC subunit UvrA (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7V9M8A2_9ACTN)

HSP 1 Score: 417 bits (1073), Expect = 1.920e-142
Identity = 214/358 (59.78%), Postives = 267/358 (74.58%), Query Frame = 1
Query:    7 IRGAREHNLKNVSIDLPRDRLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLGLMEKPDVDLIEGLSPAISIDQKGTSRNPRSTVGTVTEIYDYLRLLFARIGKPHCPKCDRPIHSQSVDQMVDHLSASGEGAQITLLAPVVRGRKGEYTKLLKEIRAQGFTRVRVDGDMMRIDEDEIVLERYVKHSIEVAVDRMTMREGVRSRLAESLETAMGLSNGLVLAQITLNGKTDEHLMSAHLACPECGISFEELAPRLFSFNSPHGACAQCSGLGFQPEMDPTLVIPDLNLSINDGALAPWGKPINSPRYHVRESRFWKRL-QRMASERGVSLKQPWARLSPEHQKLVLYGDD 1077
            + GAREHNLK+V++ LPR++LV ITGLSGSGKSSLAFDT+YAEGQRRYVESLSAYARQFL +MEKPDVD I+GLSPAISIDQK TSRNPRSTVGTVTEIYDYLRLL+AR G+PHCP C  PI  QS+D +VD +    +G + T+ +PVVR RKGEY  + +E+RA GFTRV+VDGD+ R+ EDEIVL++  KH+IEV VDR+ M+  +R+RL +S+ETA+ L+ GLV+  I      +E   S   AC E G+S  EL PR+FSFNSPHGAC +C GLG Q E+DP L++PD +LSI +GAL PW          V  S F++ + Q +A +  + L QPW  ++ EHQ L LYG D
Sbjct:    9 VHGAREHNLKDVTVTLPRNKLVTITGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLQMMEKPDVDSIDGLSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLYARAGRPHCPVCGLPIAGQSIDTIVDQVLRLADGTRFTVNSPVVRDRKGEYKDVFEELRADGFTRVKVDGDL-RMLEDEIVLDKKFKHTIEVVVDRLVMKPDLRTRLTQSIETAVSLAEGLVVIDIA---DGEELTFSEQFACSEHGVSLPELQPRIFSFNSPHGACPRCQGLGAQQEIDPDLLVPDPSLSIGEGALVPWS---------VGSSSFYEAVTQGIADKWELDLDQPWQDMTEEHQNLFLYGTD 353          
BLAST of mRNA_P-wetherbeei_contig18142.1.1 vs. uniprot
Match: A0A7C6JT57_9FIRM (UvrABC system protein A n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A7C6JT57_9FIRM)

HSP 1 Score: 436 bits (1120), Expect = 3.310e-142
Identity = 224/359 (62.40%), Postives = 275/359 (76.60%), Query Frame = 1
Query:    1 IRIRGAREHNLKNVSIDLPRDRLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLGLMEKPDVDLIEGLSPAISIDQKGTSRNPRSTVGTVTEIYDYLRLLFARIGKPHCPKCDRPIHSQSVDQMVDHLSASGEGAQITLLAPVVRGRKGEYTKLLKEIRAQGFTRVRVDGDMMRIDEDEIVLERYVKHSIEVAVDRMTMREGVRSRLAESLETAMGLSNGLVLAQITLNGKTDEHLMSAHLACPECGISFEELAPRLFSFNSPHGACAQCSGLGFQPEMDPTLVIPDLNLSINDGALAPWGKPINSPRYHVRESRFWKRLQRMASERGVSLKQPWARLSPEHQKLVLYGDD 1077
            I++RGAR+HNLKN+SIDLPR++L+VITGLSGSGKSSLAFDT+YAEGQRRYVESLSAYARQFLG M+KPDVD IEGLSPAISIDQK TS NPRSTVGTVTEIYDYLRLLFARIG+PHCP C   I  Q+VDQMVD +    EG++I +LAP+VRGRKGE+ ++++E R  GF R+RVDG +  + E EI LE+  KH++EV VDR+ +R G+R RLA+SLE A+GLS GLVL  + L G  DE   S + ACPECG S+EEL+PRLFSFNSP+GAC  C+GLG   E+DP LVIPD N SI +GA+AP+ +  N          F + L+ +A+    S + P   L PEH  ++LYG+D
Sbjct:    6 IKVRGARQHNLKNISIDLPRNKLIVITGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLGQMDKPDVDSIEGLSPAISIDQKSTSHNPRSTVGTVTEIYDYLRLLFARIGQPHCPDCGSSIRQQTVDQMVDRVLKLPEGSRILILAPLVRGRKGEHQRIIEETRRSGFVRMRVDGQVRELSE-EIKLEKNKKHTLEVVVDRLRIRSGIRKRLADSLELALGLSGGLVLVSM-LEG--DEFTFSQNFACPECGFSYEELSPRLFSFNSPYGACPTCTGLGITMEIDPDLVIPDPNKSIAEGAIAPFSRSTNY---------FPQILEALAAHYHFSTEVPVKDLKPEHLNILLYGND 351          
BLAST of mRNA_P-wetherbeei_contig18142.1.1 vs. uniprot
Match: A0A7C6U231_9FIRM (Excinuclease ABC subunit UvrA (Fragment) n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A7C6U231_9FIRM)

HSP 1 Score: 431 bits (1108), Expect = 4.760e-142
Identity = 218/356 (61.24%), Postives = 276/356 (77.53%), Query Frame = 1
Query:    7 IRGAREHNLKNVSIDLPRDRLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLGLMEKPDVDLIEGLSPAISIDQKGTSRNPRSTVGTVTEIYDYLRLLFARIGKPHCPKCDRPIHSQSVDQMVDHLSASGEGAQITLLAPVVRGRKGEYTKLLKEIRAQGFTRVRVDGDMMRIDEDEIVLERYVKHSIEVAVDRMTMREGVRSRLAESLETAMGLSNGLVLAQITLNGKTDEHLMSAHLACPECGISFEELAPRLFSFNSPHGACAQCSGLGFQPEMDPTLVIPDLNLSINDGALAPWGKPINSPRYHVRESRFWKRLQRMASERGVSLKQPWARLSPEHQKLVLYGD 1074
            I+GAREHNLKN+++++PR RLVVITGLSGSGKSSLAFDT+YAEGQRRYVESLSAYARQFLG MEKPDVD IEGLSPAISIDQK TSRNPRSTVGTVTEIYDYLRLLFARIG P+CP C  PI  Q+V Q+VD +     G+++ +L+P+VRGRKGEY KLL+ IR QGF RVRVDG+M ++ EDEI L++  KH+IEV VDR+ ++EG+  RLA+SLETA+  S+GLV   + ++G+ +E L S   AC  CG S EEL+PR+FSFNSP+GAC  CSGLGFQ E+DP LV+P+ +LS+ +GA+ PW +      Y        + L   A+  G+ + +P+  LSPE ++L++YG+
Sbjct:    7 IKGAREHNLKNINLEIPRSRLVVITGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLGQMEKPDVDSIEGLSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLFARIGHPYCPDCRIPIEQQTVQQIVDRIMELPAGSKLEILSPLVRGRKGEYQKLLENIRQQGFIRVRVDGEM-KLLEDEIKLDKNKKHTIEVVVDRLVVKEGLEKRLADSLETALKQSDGLV--SVMVHGQEEELLFSEKFACTRCGFSMEELSPRMFSFNSPYGACEACSGLGFQTEVDPDLVVPNPDLSLAEGAILPWNRSGGFGYYQ-------QMLLTTAAYYGIDVNKPYKDLSPEEKELIMYGN 352          
BLAST of mRNA_P-wetherbeei_contig18142.1.1 vs. uniprot
Match: A0A7V6WH17_9FIRM (Excinuclease ABC subunit UvrA (Fragment) n=1 Tax=Clostridia bacterium TaxID=2044939 RepID=A0A7V6WH17_9FIRM)

HSP 1 Score: 418 bits (1075), Expect = 6.000e-142
Identity = 210/355 (59.15%), Postives = 271/355 (76.34%), Query Frame = 1
Query:    7 IRGAREHNLKNVSIDLPRDRLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLGLMEKPDVDLIEGLSPAISIDQKGTSRNPRSTVGTVTEIYDYLRLLFARIGKPHCPKCDRPIHSQSVDQMVDHLSASGEGAQITLLAPVVRGRKGEYTKLLKEIRAQGFTRVRVDGDMMRIDEDEIVLERYVKHSIEVAVDRMTMREGVRSRLAESLETAMGLSNGLVLAQITLNGKTDEHLMSAHLACPECGISFEELAPRLFSFNSPHGACAQCSGLGFQPEMDPTLVIPDLNLSINDGALAPWGKPINSPRYHVRESRFWKRLQRMASERGVSLKQPWARLSPEHQKLVLYG 1071
            I+GAREHNL+N+ +++PRD+LVVITGLSGSGKSSLAFDT+YAEGQRRYVESLSAYARQFLG M+KPDVD IEGLSPAISIDQK T RNPRSTVGTVTEIYDYLRLLFAR+G+PHCP+C +PI  Q++ QMVD L A  E  +I +LAP+VRGRKGE+ K+L+E+R QG  RVRVDG++  + E EI LE+  KH++E  +DR+ ++EG+  RLA+SLE A+GL  G+ +  +   G+ D+ + S H AC +CGIS EE+ PR FSFNSP+GAC  CSGLGF+ E+DP LVIPD +LS+  GA+APW +   S  Y+ +       L+ +A+  G +++ P  +L     + +LYG
Sbjct:    7 IKGAREHNLRNIDVEIPRDQLVVITGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLGQMDKPDVDYIEGLSPAISIDQKTTGRNPRSTVGTVTEIYDYLRLLFARVGRPHCPQCGKPISQQTITQMVDQLMALPERTRIQVLAPLVRGRKGEHQKILEELRRQGLVRVRVDGEVRELAE-EIKLEKNKKHTLEAVIDRIIIKEGIEQRLADSLEIAVGLGEGMAVVAV---GEEDDLIFSEHFACIDCGISLEEIQPRTFSFNSPYGACPVCSGLGFKMEVDPDLVIPDRSLSLAQGAVAPWSR--GSSTYYPQI------LRCVANHCGFNMETPLNQLEEWQLQALLYG 349          
BLAST of mRNA_P-wetherbeei_contig18142.1.1 vs. uniprot
Match: A0A7Y3KJM4_9BACT (Excinuclease ABC subunit UvrA (Fragment) n=1 Tax=Candidatus Eremiobacteraeota bacterium TaxID=2052317 RepID=A0A7Y3KJM4_9BACT)

HSP 1 Score: 426 bits (1096), Expect = 6.990e-142
Identity = 220/358 (61.45%), Postives = 268/358 (74.86%), Query Frame = 1
Query:    7 IRGAREHNLKNVSIDLPRDRLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLGLMEKPDVDLIEGLSPAISIDQKGTSRNPRSTVGTVTEIYDYLRLLFARIGKPHCPKCDRPIHSQSVDQMVDHLSASGEGAQITLLAPVVRGRKGEYTKLLKEIRAQGFTRVRVDGDMMRIDEDEIVLERYVKHSIEVAVDRMTMREGVRSRLAESLETAMGLSNGLVLAQITL-NGKTDEHLMSAHLACPECGISFEELAPRLFSFNSPHGACAQCSGLGFQPEMDPTLVIPDLNLSINDGALAPWGKPINSPRYHVRESRFWKRLQRMASERGVSLKQPWARLSPEHQKLVLYGDD 1077
            I+GAREHNLKNV + LPR+RL+V+TGLSGSGKSSLAFDT+YAEGQRRYVESLS+YARQFLG MEKPDVD IEGLSPAISIDQK TSRNPRSTVGTVTEIYDYLRLLFARIG PHCPKC R I +QS +Q+VD +    EG +I LLAP+VRGRKGEYTKL +EI  +GF RVRVDG+M  + E +I +++  KH+IEV VDR+  +  +R RL +S+ET + LS G+V A +     K  E   S   AC +CG+SFEELAPRLFSFNSP+GAC  CSGLG + E+DP  VIPD + SI DGA+ PW K + + R+    + + ++L+R+     V +  P  R S E   +VLYG D
Sbjct:   10 IKGAREHNLKNVDLTLPRNRLIVVTGLSGSGKSSLAFDTIYAEGQRRYVESLSSYARQFLGQMEKPDVDYIEGLSPAISIDQKSTSRNPRSTVGTVTEIYDYLRLLFARIGVPHCPKCGRAITTQSSEQIVDAILDLPEGTRIVLLAPLVRGRKGEYTKLFEEIAKEGFARVRVDGEMRELRE-KITIDKKRKHTIEVVVDRLVNKPDIRKRLTDSVETTLRLSTGIVTASLEEPTKKPREVTFSEAFACVDCGLSFEELAPRLFSFNSPYGACPSCSGLGEKVEIDPWKVIPDRSKSIADGAIVPWSKTLGTGRFPSMNAYYLQQLERVLRRYNVRMTTPVERFSDEVLDVVLYGTD 366          
BLAST of mRNA_P-wetherbeei_contig18142.1.1 vs. uniprot
Match: A0A7C6ZAL4_9FIRM (UvrABC system protein A n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A7C6ZAL4_9FIRM)

HSP 1 Score: 434 bits (1116), Expect = 1.300e-141
Identity = 214/355 (60.28%), Postives = 273/355 (76.90%), Query Frame = 1
Query:    7 IRGAREHNLKNVSIDLPRDRLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLGLMEKPDVDLIEGLSPAISIDQKGTSRNPRSTVGTVTEIYDYLRLLFARIGKPHCPKCDRPIHSQSVDQMVDHLSASGEGAQITLLAPVVRGRKGEYTKLLKEIRAQGFTRVRVDGDMMRIDEDEIVLERYVKHSIEVAVDRMTMREGVRSRLAESLETAMGLSNGLVLAQITLNGKTDEHLMSAHLACPECGISFEELAPRLFSFNSPHGACAQCSGLGFQPEMDPTLVIPDLNLSINDGALAPWGKPINSPRYHVRESRFWKRLQRMASERGVSLKQPWARLSPEHQKLVLYG 1071
            +RGAR+HNLKN+ +++PRDRLVVITGLSGSGKSSLAFDT+YAEGQRRYVESLSAYARQFLG M+KPDVD IEGLSPAI+IDQK  SRNPRSTVGTVTEIYDYLRLLFARIGKPHCPKC +PI  Q+V Q+VD + A GEG ++ +LAPV+RG+KGE+ K++++IR +GF RVRV+G++  +DED I LERY  HSIE+ VDR+ +R GV +RLA+SLE AM    G+ +  +  +  + + + S   ACP+CG+SFEELAPR+FSFNSP+GAC +C+GLG + E+DP LV+ DL+ SI +G + PW +         R   F +R+  +    G+    P  RL  EHQ+L+LYG
Sbjct:    8 VRGARQHNLKNIDLEIPRDRLVVITGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLGQMDKPDVDYIEGLSPAIAIDQKSGSRNPRSTVGTVTEIYDYLRLLFARIGKPHCPKCGKPITQQTVQQIVDQVMALGEGTRVQVLAPVIRGKKGEHRKVIEDIRKEGFVRVRVNGEVRGVDED-IALERYKIHSIEIVVDRLIIRPGVETRLADSLELAMKRGEGIAVVNVLGSESSRDLVFSEKFACPDCGVSFEELAPRMFSFNSPYGACPECAGLGTKEEIDPELVL-DLDRSIMEGGIVPWERSWQG----TRSDYFARRVMAVCERFGIDPSVPIGRLPGEHQRLLLYG 356          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18142.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X8XXP2_9BURK1.250e-16568.26UvrABC system protein A n=1 Tax=Burkholderiales ba... [more]
A0A7C6W928_9FIRM3.880e-14460.56Excinuclease ABC subunit UvrA (Fragment) n=1 Tax=F... [more]
A0A538DIF2_9ACTN4.750e-14360.50Excinuclease ABC subunit UvrA (Fragment) n=1 Tax=A... [more]
A0A7C3H919_9BACT7.050e-14359.72Excinuclease ABC subunit UvrA (Fragment) n=1 Tax=B... [more]
A0A7V9M8A2_9ACTN1.920e-14259.78Excinuclease ABC subunit UvrA (Fragment) n=1 Tax=A... [more]
A0A7C6JT57_9FIRM3.310e-14262.40UvrABC system protein A n=1 Tax=Firmicutes bacteri... [more]
A0A7C6U231_9FIRM4.760e-14261.24Excinuclease ABC subunit UvrA (Fragment) n=1 Tax=F... [more]
A0A7V6WH17_9FIRM6.000e-14259.15Excinuclease ABC subunit UvrA (Fragment) n=1 Tax=C... [more]
A0A7Y3KJM4_9BACT6.990e-14261.45Excinuclease ABC subunit UvrA (Fragment) n=1 Tax=C... [more]
A0A7C6ZAL4_9FIRM1.300e-14160.28UvrABC system protein A n=1 Tax=Firmicutes bacteri... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18142contigP-wetherbeei_contig18142:1..1092 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog767817.Desgi_4313
Preferred nameuvrA
PFAMsABC_tran
Model size1092
Max annot lvl186801|Clostridia
KEGG koko:K03701
KEGG Pathwayko03420,map03420
Hectar predicted targeting categoryother localisation
Exons1
Evalue7.11e-141
EggNOG OGsCOG0178@1|root,COG0178@2|Bacteria,1TPIJ@1239|Firmicutes,2485F@186801|Clostridia,260NC@186807|Peptococcaceae
DescriptionThe UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
Cds size1092
COG categoryL
BRITEko00000,ko00001,ko03400
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186137.19728-CDS-P-wetherbeei_contig18142:0..10921683186137.19728-CDS-P-wetherbeei_contig18142:0..1092Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig18142 1..1092 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18142.1.1prot_P-wetherbeei_contig18142.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig18142 1..1092 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig18142.1.1

>prot_P-wetherbeei_contig18142.1.1 ID=prot_P-wetherbeei_contig18142.1.1|Name=mRNA_P-wetherbeei_contig18142.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=364bp
IRIRGAREHNLKNVSIDLPRDRLVVITGLSGSGKSSLAFDTLYAEGQRRY
VESLSAYARQFLGLMEKPDVDLIEGLSPAISIDQKGTSRNPRSTVGTVTE
IYDYLRLLFARIGKPHCPKCDRPIHSQSVDQMVDHLSASGEGAQITLLAP
VVRGRKGEYTKLLKEIRAQGFTRVRVDGDMMRIDEDEIVLERYVKHSIEV
AVDRMTMREGVRSRLAESLETAMGLSNGLVLAQITLNGKTDEHLMSAHLA
CPECGISFEELAPRLFSFNSPHGACAQCSGLGFQPEMDPTLVIPDLNLSI
NDGALAPWGKPINSPRYHVRESRFWKRLQRMASERGVSLKQPWARLSPEH
QKLVLYGDDSYFEG
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mRNA from alignment at P-wetherbeei_contig18142:1..1092-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig18142.1.1 ID=mRNA_P-wetherbeei_contig18142.1.1|Name=mRNA_P-wetherbeei_contig18142.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1092bp|location=Sequence derived from alignment at P-wetherbeei_contig18142:1..1092- (Phaeothamnion wetherbeei SAG_119_79)
ATTCGCATCCGCGGCGCGCGCGAGCACAACCTCAAGAACGTCAGCATTGA CCTTCCGCGCGATCGCCTGGTCGTCATCACAGGCCTGTCCGGCTCCGGGA AGTCCAGCCTGGCTTTCGACACCCTATATGCCGAGGGCCAGCGTCGCTAC GTTGAGTCTCTCTCGGCCTACGCGCGCCAATTCTTAGGCTTGATGGAGAA GCCTGACGTAGACCTCATCGAGGGCCTCTCGCCGGCCATTTCCATCGATC AAAAGGGGACTTCGCGCAACCCACGCTCGACGGTGGGAACCGTCACGGAA ATTTACGACTACCTCCGTCTGCTCTTCGCCCGCATCGGCAAGCCCCACTG TCCCAAATGCGACCGGCCCATCCACAGCCAGAGCGTGGACCAGATGGTGG ACCACCTCTCGGCATCCGGCGAAGGCGCCCAGATCACGCTGCTCGCCCCC GTGGTGCGCGGCCGCAAGGGCGAGTACACCAAGCTCCTCAAGGAGATTCG TGCCCAGGGTTTCACCCGCGTGCGCGTCGATGGCGATATGATGCGCATTG ACGAGGACGAAATCGTTCTGGAGCGCTACGTCAAGCACTCCATCGAAGTG GCCGTTGACCGCATGACGATGCGCGAGGGCGTCCGCTCCCGCCTGGCCGA ATCCCTCGAGACCGCAATGGGCCTCTCCAACGGTCTGGTCCTGGCTCAGA TCACCCTCAACGGAAAGACCGACGAGCATCTGATGTCGGCCCATCTGGCC TGCCCCGAATGCGGTATCTCTTTTGAAGAGCTAGCTCCGCGTCTGTTCTC CTTCAACTCTCCGCACGGCGCCTGCGCGCAGTGTAGCGGCCTGGGTTTTC AGCCCGAAATGGACCCGACCCTGGTCATCCCAGATCTGAACCTGAGCATC AACGACGGTGCCCTGGCGCCCTGGGGAAAGCCCATCAATTCGCCGCGCTA CCACGTCCGCGAATCGCGTTTCTGGAAGCGTCTGCAGCGCATGGCCTCGG AACGCGGCGTCAGTCTCAAGCAGCCCTGGGCACGCCTTTCGCCCGAGCAC CAGAAGCTCGTCCTTTATGGCGATGACTCCTACTTCGAGGGT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig18142:1..1092-

>mRNA_P-wetherbeei_contig18142.1.1 ID=mRNA_P-wetherbeei_contig18142.1.1|Name=mRNA_P-wetherbeei_contig18142.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1092bp|location=Sequence derived from alignment at P-wetherbeei_contig18142:1..1092- (Phaeothamnion wetherbeei SAG_119_79)
ATTCGCATCCGCGGCGCGCGCGAGCACAACCTCAAGAACGTCAGCATTGA
CCTTCCGCGCGATCGCCTGGTCGTCATCACAGGCCTGTCCGGCTCCGGGA
AGTCCAGCCTGGCTTTCGACACCCTATATGCCGAGGGCCAGCGTCGCTAC
GTTGAGTCTCTCTCGGCCTACGCGCGCCAATTCTTAGGCTTGATGGAGAA
GCCTGACGTAGACCTCATCGAGGGCCTCTCGCCGGCCATTTCCATCGATC
AAAAGGGGACTTCGCGCAACCCACGCTCGACGGTGGGAACCGTCACGGAA
ATTTACGACTACCTCCGTCTGCTCTTCGCCCGCATCGGCAAGCCCCACTG
TCCCAAATGCGACCGGCCCATCCACAGCCAGAGCGTGGACCAGATGGTGG
ACCACCTCTCGGCATCCGGCGAAGGCGCCCAGATCACGCTGCTCGCCCCC
GTGGTGCGCGGCCGCAAGGGCGAGTACACCAAGCTCCTCAAGGAGATTCG
TGCCCAGGGTTTCACCCGCGTGCGCGTCGATGGCGATATGATGCGCATTG
ACGAGGACGAAATCGTTCTGGAGCGCTACGTCAAGCACTCCATCGAAGTG
GCCGTTGACCGCATGACGATGCGCGAGGGCGTCCGCTCCCGCCTGGCCGA
ATCCCTCGAGACCGCAATGGGCCTCTCCAACGGTCTGGTCCTGGCTCAGA
TCACCCTCAACGGAAAGACCGACGAGCATCTGATGTCGGCCCATCTGGCC
TGCCCCGAATGCGGTATCTCTTTTGAAGAGCTAGCTCCGCGTCTGTTCTC
CTTCAACTCTCCGCACGGCGCCTGCGCGCAGTGTAGCGGCCTGGGTTTTC
AGCCCGAAATGGACCCGACCCTGGTCATCCCAGATCTGAACCTGAGCATC
AACGACGGTGCCCTGGCGCCCTGGGGAAAGCCCATCAATTCGCCGCGCTA
CCACGTCCGCGAATCGCGTTTCTGGAAGCGTCTGCAGCGCATGGCCTCGG
AACGCGGCGTCAGTCTCAAGCAGCCCTGGGCACGCCTTTCGCCCGAGCAC
CAGAAGCTCGTCCTTTATGGCGATGACTCCTACTTCGAGGGT
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