mRNA_P-wetherbeei_contig18136.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig18136.1.1
Unique NamemRNA_P-wetherbeei_contig18136.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig18136.1.1 vs. uniprot
Match: A0A494YAS5_9BURK (CoA transferase n=1 Tax=Pararobbsia silviterrae TaxID=1792498 RepID=A0A494YAS5_9BURK)

HSP 1 Score: 444 bits (1141), Expect = 7.230e-152
Identity = 222/387 (57.36%), Postives = 277/387 (71.58%), Query Frame = 1
Query:   28 PSPTAAPLDGVRVLDVSRFIAGPYCAMLLGDMGADVIKVEPPGRGENSRAFGPFVEGESLYTMVFNRNKRSLTLDLRSEAGKEVFRDLLRKADVLVENFVAGTLEKMGFDWDTLRGLNPRLIVTRISGFGQTGPLSRKPCFDVIAQTMSGLMDITGEADGRPTMAGTYVVDYSTGMYATIGTLGALQARSRSGTGQIVDVAMLDSAMSMLMTAIPEQMLLGRTMTRRGNRDRYAAPANTFPTSDGAWVHLAPAGDAMFRALAGVMGRAEIADDTRFRNNDARMTNVEALEAIITTWTANLTAAQLLEALATIGVPCAKVARIPDLLENPQLAHRGQILDLPHAKAGTVPMQGFSIRFGDTPMRLNHAPPTLGQHTDEVLDQWLALDA 1188
            PS     L G++VLD+SRFIAGPYCAMLLGD+GADVIKVE PG+GEN+R+F P V GESLYT+VFNRNKR +TL+ RS  G+ V R+L+ KAD+++ENFV GTLEKMG  WD +  LNPRLI+TRISGF  TGP + +PCFDVIAQ MSGLMD+TG  DG PT AGT+VVDYST MYATIGTL ALQ R R+G GQ+V+  +L SA+SML+TAIP+Q+L G T TR G RDR+ AP NTF T+DGAW+ L   GD  F ALA  M R ++ +D  F  N  RM +V  +EAI+  W    T  Q+L  L   G+P AKVA I D++++  +     I+ L   K G VP+QGF+I    TP  + H  P++G+HTDEVL +WL + A
Sbjct:    4 PSAVPGSLAGLKVLDLSRFIAGPYCAMLLGDLGADVIKVETPGKGENTRSFDPQVGGESLYTIVFNRNKRGMTLNFRSPEGQAVLRELIAKADIVIENFVPGTLEKMGCGWDAMHALNPRLIMTRISGFKSTGPYAHRPCFDVIAQAMSGLMDLTGHPDGPPTAAGTFVVDYSTAMYATIGTLAALQHRERTGEGQLVEATLLSSALSMLVTAIPDQLLSGHTTTRNGTRDRFNAPGNTFKTADGAWILLLAVGDDKFNALAACMDRDDLLEDPNFSTNAQRMRHVPEIEAIVQDWVGRYTVEQILPKLEASGIPSAKVATIADVVQDRNVIESELIVQLDQ-KGGQVPVQGFAIDMNATPPAIRHPAPSVGEHTDEVLREWLGMRA 389          
BLAST of mRNA_P-wetherbeei_contig18136.1.1 vs. uniprot
Match: W9HA37_9PROT (Carnitine dehydratase n=2 Tax=Skermanella TaxID=204447 RepID=W9HA37_9PROT)

HSP 1 Score: 441 bits (1135), Expect = 4.310e-151
Identity = 211/380 (55.53%), Postives = 281/380 (73.95%), Query Frame = 1
Query:   49 LDGVRVLDVSRFIAGPYCAMLLGDMGADVIKVEPPGRGENSRAFGPFVEGESLYTMVFNRNKRSLTLDLRSEAGKEVFRDLLRKADVLVENFVAGTLEKMGFDWDTLRGLNPRLIVTRISGFGQTGPLSRKPCFDVIAQTMSGLMDITGEADGRPTMAGTYVVDYSTGMYATIGTLGALQARSRSGTGQIVDVAMLDSAMSMLMTAIPEQMLLGRTMTRRGNRDRYAAPANTFPTSDGAWVHLAPAGDAMFRALAGVMGRAEIADDTRFRNNDARMTNVEALEAIITTWTANLTAAQLLEALATIGVPCAKVARIPDLLENPQLAHRGQILDLPHAKAGTVPMQGFSIRFGDTPMRLNHAPPTLGQHTDEVLDQWLALDA 1188
            + G++VLD+SRFIAGP C M LGD+GADV+KVE P  G+++R   P V GESLY MVFNRNKR +TL+ R    +E  R+L+++AD+L+ENF  GT+EKMG  WD LR +NPRLI+ RISG+GQTGP++ +PCFDVIAQ  SGLM+ITG+ DG PT AGT+VVDYST +YATIG L AL+ R+R+G GQ+VD +++ SA S+L+TAIPEQ+LLG++MTR GNRDRY+APA TF  +DGAW+H+    DA F  L  +M R E+ +D RF N+ ARM ++  +EAI++ W A   A +++  L    +P AK+A +PD++ NP +   G I+D+ HA AGTVPMQG  +R   TP  +  A PTLG+HT EVL+QWL + A
Sbjct:    1 MHGLKVLDLSRFIAGPQCGMTLGDLGADVVKVERPRFGDDTRTLAPQVAGESLYFMVFNRNKRGITLNFRDPKAQETLRELVKQADILIENFRPGTMEKMGCGWDDLRRINPRLIMARISGYGQTGPMAGEPCFDVIAQASSGLMEITGDPDGPPTTAGTFVVDYSTALYATIGILAALEHRNRTGEGQLVDASLMGSATSLLVTAIPEQLLLGQSMTRMGNRDRYSAPAQTFQAADGAWLHMVAGNDAHFPRLTRIMNRPELLEDPRFANHAARMAHIPEIEAIVSEWIAGKPADEVVALLRQAELPVAKIATLPDVVANPYMRESGHIVDVEHATAGTVPMQGLPVRLNVTPSTIRRAAPTLGEHTAEVLEQWLGMTA 380          
BLAST of mRNA_P-wetherbeei_contig18136.1.1 vs. uniprot
Match: UPI0010C9D113 (CoA transferase n=1 Tax=Rhodoligotrophos defluvii TaxID=2561934 RepID=UPI0010C9D113)

HSP 1 Score: 437 bits (1125), Expect = 1.680e-149
Identity = 216/376 (57.45%), Postives = 275/376 (73.14%), Query Frame = 1
Query:   49 LDGVRVLDVSRFIAGPYCAMLLGDMGADVIKVEPPGRGENSRAFGPFVEGESLYTMVFNRNKRSLTLDLRSEAGKEVFRDLLRKADVLVENFVAGTLEKMGFDWDTLRGLNPRLIVTRISGFGQTGPLSRKPCFDVIAQTMSGLMDITGEADGRPTMAGTYVVDYSTGMYATIGTLGALQARSRSGTGQIVDVAMLDSAMSMLMTAIPEQMLLGRTMTRRGNRDRYAAPANTFPTSDGAWVHLAPAGDAMFRALAGVMGRAEIADDTRFRNNDARMTNVEALEAIITTWTANLTAAQLLEALATIGVPCAKVARIPDLLENPQLAHRGQILDLPHAKAGTVPMQGFSIRFGDTPMRLNHAPPTLGQHTDEVLDQWL 1176
            L G++VLDVSRFIAGP+CAM LGD GADV+KVE    GE++RA  P + GES+Y M +NRNKRS  LD R+   + V R+L  KADVL+ENF  GT+E+MG  W+TL  LNPRLI+ RISGFGQTGPL+++PCFDVIAQ MSG+MDITG+ DG PTMAGT+VVDY T +Y TIG L AL AR ++G GQ+V+  +L+SA S+LMTAIPEQ++LG+TM R+GNRDRY AP NTF  +DGAWVH+A   D +FR LA  MGR ++  D RF     R+ N +A+EA +  W A  TA  ++EA+   G+PCAKVA + D++ENPQL  RGQIL + H +AG  P  G ++  GDTP  +  A P +G+HT EV  +WL
Sbjct:    5 LQGLKVLDVSRFIAGPFCAMQLGDHGADVVKVERIDTGEDTRANEPKLGGESVYFMTYNRNKRSFALDFRNPEAQAVLRELAGKADVLIENFRPGTMEQMGCGWETLSVLNPRLIMVRISGFGQTGPLAQRPCFDVIAQAMSGMMDITGDPDGPPTMAGTFVVDYVTALYGTIGVLTALAAREQTGRGQLVEATLLESAASLLMTAIPEQVVLGKTMRRQGNRDRYTAPVNTFQGADGAWVHIASGTDPLFRRLANAMGREDLLQDPRFATAKTRVENADAIEAEVQAWVARHTADAVVEAMDRAGIPCAKVATMVDVVENPQLKARGQILSMEHPRAGIYPTHGVTVILGDTPGAVRRAAPLVGEHTREVAAEWL 380          
BLAST of mRNA_P-wetherbeei_contig18136.1.1 vs. uniprot
Match: A0A2T7TW85_9HYPH (CoA transferase n=2 Tax=unclassified Microvirga TaxID=2617746 RepID=A0A2T7TW85_9HYPH)

HSP 1 Score: 437 bits (1125), Expect = 1.740e-149
Identity = 216/381 (56.69%), Postives = 272/381 (71.39%), Query Frame = 1
Query:   43 APLDGVRVLDVSRFIAGPYCAMLLGDMGADVIKVEPPGRGENSRAFGPFVEGESLYTMVFNRNKRSLTLDLRSEAGKEVFRDLLRKADVLVENFVAGTLEKMGFDWDTLRGLNPRLIVTRISGFGQTGPLSRKPCFDVIAQTMSGLMDITGEADGRPTMAGTYVVDYSTGMYATIGTLGALQARSRSGTGQIVDVAMLDSAMSMLMTAIPEQMLLGRTMTRRGNRDRYAAPANTFPTSDGAWVHLAPAGDAMFRALAGVMGRAEIADDTRFRNNDARMTNVEALEAIITTWTANLTAAQLLEALATIGVPCAKVARIPDLLENPQLAHRGQILDLPHAKAGTVPMQGFSIRFGDTPMRLNHAPPTLGQHTDEVLDQWLALD 1185
            APL  +RVLD+SRFIAGP+CAM LGDMGADVIKVE  G GE++R   P V GESLY M++NRNKR L LD R      + +DL  KAD+LVENF  GTLE MG DW+TL  LNPRLIV RISGFGQ GP +R+PCFDVIAQ  SGLM +TG ADGRPTMAGT++VD++TG+YATIG L AL+AR  +G GQ+VDV+++DSA+S LMTAIPE +LLGR  TR G+RDRY APAN F  +DG WVH++   D +F   A   G   +  D RF +  ARM NV+A+EA +  + A  T+  ++  +   GVPCAKVARI D++ NPQL HR QI+++ H   G +PM G ++   +TP  +   PP++G+HT EVL +W   D
Sbjct:    5 APLKDIRVLDLSRFIAGPFCAMQLGDMGADVIKVERKGLGEDTRTIEPKVAGESLYVMMYNRNKRGLALDYRHPDSIAILKDLAAKADILVENFRPGTLEAMGLDWETLHTLNPRLIVVRISGFGQDGPHARRPCFDVIAQASSGLMSMTGPADGRPTMAGTFLVDFTTGLYATIGALNALRARETTGLGQVVDVSLMDSAVSFLMTAIPEYLLLGREATRNGSRDRYTAPANNFQAADGEWVHISTGNDTLFPRFAKKAGLEHLLGDPRFSSAAARMQNVDAIEAEVAAFVAAHTSEDVVRMMDEAGVPCAKVARISDVVNNPQLHHRKQIIEIDHPTIGKLPMHGVTVNLSETPGAIRRPPPSVGEHTHEVLAEWAGYD 385          
BLAST of mRNA_P-wetherbeei_contig18136.1.1 vs. uniprot
Match: UPI001CB5E4E9 (CoA transferase n=1 Tax=Cupriavidus pinatubonensis TaxID=248026 RepID=UPI001CB5E4E9)

HSP 1 Score: 437 bits (1125), Expect = 2.000e-149
Identity = 216/384 (56.25%), Postives = 278/384 (72.40%), Query Frame = 1
Query:   25 SPSPTAAPLDGVRVLDVSRFIAGPYCAMLLGDMGADVIKVEPPGRGENSRAFGPFVEGESLYTMVFNRNKRSLTLDLRSEAGKEVFRDLLRKADVLVENFVAGTLEKMGFDWDTLRGLNPRLIVTRISGFGQTGPLSRKPCFDVIAQTMSGLMDITGEADGRPTMAGTYVVDYSTGMYATIGTLGALQARSRSGTGQIVDVAMLDSAMSMLMTAIPEQMLLGRTMTRRGNRDRYAAPANTFPTSDGAWVHLAPAGDAMFRALAGVMGRAEIADDTRFRNNDARMTNVEALEAIITTWTANLTAAQLLEALATIGVPCAKVARIPDLLENPQLAHRGQILDLPHAKAGTVPMQGFSIRFGDTPMRLNHAPPTLGQHTDEVLDQWL 1176
            S +P    L G++VLD+SRFIAGPYCAMLLGDMGADV+KVE PG+GENSR+F P   GES+Y+MV NRNKR +TL+ RSE G+ V RDL+ KADV++ENFV GTLEKMG  W  +  LNPRL++TRISGF  TGP + KPCFDV+AQ MSGLMD+TG+ DG PT AG ++VDY+T MYATIGTLGA+Q +SR+G GQ+V+  ++ SA+SMLMTAIPEQ+L  RT TR G RDR+ AP NTF  +DG+W+ L   GD  FRALA  M R ++  + +F  NDARM NV  +EAI+  WT   +  +L+  L  IG+PCAKV  I +++ +  +     ++  P  + G VP+QGF      TP  L H+ P++G+HTDEVL +WL
Sbjct:    4 SSNPHTGALSGLKVLDLSRFIAGPYCAMLLGDMGADVVKVETPGKGENSRSFHPQFGGESIYSMVVNRNKRGMTLNFRSEQGQAVLRDLISKADVVIENFVPGTLEKMGCGWKEMHQLNPRLVMTRISGFKSTGPYANKPCFDVVAQAMSGLMDLTGQPDGPPTAAGVFLVDYATAMYATIGTLGAIQHQSRTGEGQLVEATLMSSALSMLMTAIPEQILFNRTPTRMGTRDRFNAPGNTFKAADGSWILLITVGDDKFRALAQCMNREDLLANPQFSTNDARMRNVSEIEAIVQEWTGQHSVDELVLKLEEIGIPCAKVNTIANVVTDRNVIESELLMQQPQ-RGGDVPLQGFPFGMNATPPVLRHSAPSIGEHTDEVLREWL 386          
BLAST of mRNA_P-wetherbeei_contig18136.1.1 vs. uniprot
Match: A0A4D8PNI3_AZOBR (CoA transferase n=2 Tax=Azospirillum TaxID=191 RepID=A0A4D8PNI3_AZOBR)

HSP 1 Score: 433 bits (1113), Expect = 1.280e-147
Identity = 204/382 (53.40%), Postives = 275/382 (71.99%), Query Frame = 1
Query:   46 PLDGVRVLDVSRFIAGPYCAMLLGDMGADVIKVEPPGRGENSRAFGPFVEGESLYTMVFNRNKRSLTLDLRSEAGKEVFRDLLRKADVLVENFVAGTLEKMGFDWDTLRGLNPRLIVTRISGFGQTGPLSRKPCFDVIAQTMSGLMDITGEADGRPTMAGTYVVDYSTGMYATIGTLGALQARSRSGTGQIVDVAMLDSAMSMLMTAIPEQMLLGRTMTRRGNRDRYAAPANTFPTSDGAWVHLAPAGDAMFRALAGVMGRAEIADDTRFRNNDARMTNVEALEAIITTWTANLTAAQLLEALATIGVPCAKVARIPDLLENPQLAHRGQILDLPHAKAGTVPMQGFSIRFGDTPMRLNHAPPTLGQHTDEVLDQWLALDAS 1191
            PL G++VLD+SRFIAGP+C M LGD+GADV+KVE P RG+++RA  P V GESLY MVFNRNKRS+TL+ R      + R+++R+AD+L+ENF  GT+EKMG  WD LR +NPRLI+ RISG+GQ GP++ +PCFD IAQ  SGLM+ITG+ DG PTM GT++VDY+T +YAT+G L AL+ R ++G GQ+VD +++ SA+SML+TAIPEQ +LGR MTR GNRDRY+APA TF   DG W+H+    DA F  L  +M R ++  D RF   DARM N+EA+E I+  W   + A +++  L    +P AK+A +PDLL NP +    QI+D+PHAK G+    G ++R  D+P  +  A P LG+HT++VL +WL +  S
Sbjct:    9 PLHGLKVLDLSRFIAGPHCGMQLGDLGADVVKVERPKRGDDTRALEPHVGGESLYFMVFNRNKRSITLNFRDPRAHTILREMVRQADILIENFRPGTMEKMGCGWDDLRAINPRLIMARISGYGQEGPMAGEPCFDGIAQATSGLMEITGDPDGPPTMGGTFLVDYATALYATVGILAALEDRHKTGKGQMVDASLMGSAVSMLVTAIPEQAMLGRAMTRVGNRDRYSAPAQTFQAGDGKWLHMVAGNDAHFPRLTRIMNRPDLLQDPRFATLDARMRNIEAIEVIVAEWIVGMPADEVIALLRQAELPSAKIATLPDLLANPYMREAKQIVDIPHAKTGSFTTHGLTVRLSDSPGSIRRAAPVLGEHTEDVLGEWLGMTPS 390          
BLAST of mRNA_P-wetherbeei_contig18136.1.1 vs. uniprot
Match: A0A176F2Z7_9RHOB (Uncharacterized protein n=1 Tax=Roseovarius sp. HI0049 TaxID=1822235 RepID=A0A176F2Z7_9RHOB)

HSP 1 Score: 432 bits (1110), Expect = 2.860e-147
Identity = 213/379 (56.20%), Postives = 280/379 (73.88%), Query Frame = 1
Query:   40 AAPLDGVRVLDVSRFIAGPYCAMLLGDMGADVIKVEPPGRGENSRAFGPFVEGESLYTMVFNRNKRSLTLDLRSEAGKEVFRDLLRKADVLVENFVAGTLEKMGFDWDTLRGLNPRLIVTRISGFGQTGPLSRKPCFDVIAQTMSGLMDITGEADGRPTMAGTYVVDYSTGMYATIGTLGALQARSRSGTGQIVDVAMLDSAMSMLMTAIPEQMLLGRTMTRRGNRDRYAAPANTFPTSDGAWVHLAPAGDAMFRALAGVMGRAEIADDTRFRNNDARMTNVEALEAIITTWTANLTAAQLLEALATIGVPCAKVARIPDLLENPQLAHRGQILDLPHAKAGTVPMQGFSIRFGDTPMRLNHAPPTLGQHTDEVLDQWL 1176
            A+ L+ +R+LD+SRFIAGPYC+MLLGDMGADV+K+E PG+GE +R + P V+G+SLYTMVFNRNKR LT++LRS  G+E+ R+L+++ADVLVENF  GTLEKMG  WD L  +NPRLI+ RISGFGQTGP ++KPCFDVIAQ+MSGLMD+TG+ DG PT+ GTYV DY T MYATIG LGA++AR  +G GQ+VDV++LDSA+SML TAIPE+++L R MTRRGNRD Y  P  ++ T DG WV++A    ++F   A  +GR ++ +D RF    AR  + + LEAI   W A  +  ++LE L    VPC K+A I D++ENPQLAHR QI+++P      VPMQG +I   +TP+ +    P +G  + E+L  WL
Sbjct:    2 ASVLENIRILDLSRFIAGPYCSMLLGDMGADVVKIETPGKGELARNYEPQVDGQSLYTMVFNRNKRGLTINLRSPEGQELLRELVKEADVLVENFRPGTLEKMGCGWDVLSEINPRLILARISGFGQTGPYAQKPCFDVIAQSMSGLMDVTGDPDGPPTVIGTYVCDYVTAMYATIGILGAIEARHTTGRGQVVDVSLLDSAVSMLTTAIPERLMLDRKMTRRGNRDPYGPPTASYKTGDGDWVYIACG--SLFPRFAKAIGREDLLEDERFATFAARGGHTKELEAIAAEWIAERSTTEVLETLEREDVPCTKIASIDDVVENPQLAHRNQIVNVPTKTGRDVPMQGVTIHLSETPLSIRTGLPDVGGDSAEILSDWL 378          
BLAST of mRNA_P-wetherbeei_contig18136.1.1 vs. uniprot
Match: A0A1F4Q0B7_9BACT (Uncharacterized protein n=2 Tax=unclassified candidate division NC10 TaxID=1207073 RepID=A0A1F4Q0B7_9BACT)

HSP 1 Score: 432 bits (1110), Expect = 3.070e-147
Identity = 211/379 (55.67%), Postives = 273/379 (72.03%), Query Frame = 1
Query:   46 PLDGVRVLDVSRFIAGPYCAMLLGDMGADVIKVEPPGRGENSRAFGPFVEGESLYTMVFNRNKRSLTLDLRSEAGKEVFRDLLRKADVLVENFVAGTLEKMGFDWDTLRGLNPRLIVTRISGFGQTGPLSRKPCFDVIAQTMSGLMDITGEADGRPTMAGTYVVDYSTGMYATIGTLGALQARSRSGTGQIVDVAMLDSAMSMLMTAIPEQMLLGRTMTRRGNRDRYAAPANTFPTSDGAWVHLAPAGDAMFRALAGVMGRAEIADDTRFRNNDARMTNVEALEAIITTWTANLTAAQLLEALATIGVPCAKVARIPDLLENPQLAHRGQILDLPHAKAGTVPMQGFSIRFGDTPMRLNHAPPTLGQHTDEVLDQWLAL 1182
            PL+G++VLD++R +AGP+  ML+GDMGA+V+KVE  GRG++ R   P V GESLY +V NRNK  +T++ R   G  + RDL+R ADVLVENF AGT+EKMG  +D L+ +NPRLI+  ISGFGQ GP S   C+DVIAQ MSGLM++TG  DG PTMAG++VVDYST +YA IGTL AL+AR  +G GQ VDVA+LD+A+S L+TAIPE +LLGR MTRRGNRDRYAAP N F   DG WV+LA   D++F  L  VMG+ E+  D RF   DARM ++E  EA++  W  N TA +++  +   G+PCAKVA I +++ NPQ+ HRG I ++ H  AG VPMQG +I F  TP ++   PP LGQH +E+  +WL L
Sbjct:    4 PLEGIKVLDLTRVLAGPFSCMLMGDMGAEVVKVERSGRGDDVRDVAPQVGGESLYFLVMNRNKLGVTINFRHPRGPALLRDLVRHADVLVENFRAGTMEKMGCGYDVLKAINPRLIMVSISGFGQDGPYSNLACYDVIAQAMSGLMEMTGPPDGPPTMAGSFVVDYSTALYAVIGTLAALRAREHTGIGQRVDVALLDTAVSYLITAIPEYLLLGRKMTRRGNRDRYAAPVNLFRAKDGGWVYLAAGNDSLFPQLVKVMGQEEVLQDPRFATLDARMAHIEEGEALLAKWVENKTADEVVHLVREAGLPCAKVASIDEVVANPQIRHRGMIAEIEHPTAGRVPMQGLNIHFSHTPKQIRRPPPLLGQHNEEIYGRWLGL 382          
BLAST of mRNA_P-wetherbeei_contig18136.1.1 vs. uniprot
Match: UPI001906322F (CoA transferase n=2 Tax=Azospirillum TaxID=191 RepID=UPI001906322F)

HSP 1 Score: 429 bits (1104), Expect = 2.490e-146
Identity = 203/379 (53.56%), Postives = 279/379 (73.61%), Query Frame = 1
Query:   46 PLDGVRVLDVSRFIAGPYCAMLLGDMGADVIKVEPPGRGENSRAFGPFVEGESLYTMVFNRNKRSLTLDLRSEAGKEVFRDLLRKADVLVENFVAGTLEKMGFDWDTLRGLNPRLIVTRISGFGQTGPLSRKPCFDVIAQTMSGLMDITGEADGRPTMAGTYVVDYSTGMYATIGTLGALQARSRSGTGQIVDVAMLDSAMSMLMTAIPEQMLLGRTMTRRGNRDRYAAPANTFPTSDGAWVHLAPAGDAMFRALAGVMGRAEIADDTRFRNNDARMTNVEALEAIITTWTANLTAAQLLEALATIGVPCAKVARIPDLLENPQLAHRGQILDLPHAKAGTVPMQGFSIRFGDTPMRLNHAPPTLGQHTDEVLDQWLAL 1182
            PLDG++VLD+SRFIAGP+C M+LGD+GADV+KVE P RG+++RA  P VEGESLY MVFNRNKRS+TL+ R      + R+++++ADVL+ENF  GT+EKMG  W+ L  +NPRLI+ RISG+GQ G ++ +PCFD IAQ  SGLM+ITG+ DG PTM GT++VDY+T +YA+IG L A++ R ++G GQ+VD +++ SA+SML+TAIPEQ +LGR+M+R GNRDRY+APA TF  +DG W+H+    DA F  L  +M R ++ +D RF   +ARM N+ A+EA++  W A L A +++  L    +P A++A +PDLL NP +    QI++L H KAGTV   G ++R  D+P  + H  P LGQHTDEVL +WL +
Sbjct:    4 PLDGLKVLDLSRFIAGPHCGMMLGDLGADVVKVERPRRGDDTRALEPQVEGESLYFMVFNRNKRSITLNFRDPRAHGLLREMVKQADVLIENFRPGTMEKMGCGWEDLHAINPRLIMARISGYGQQGSMAAEPCFDGIAQATSGLMEITGDPDGPPTMGGTFLVDYATALYASIGILAAVEHRHKTGKGQMVDASLMGSAVSMLVTAIPEQAMLGRSMSRVGNRDRYSAPAQTFRAADGVWLHMVAGNDAHFPRLTRIMKRPDLLEDPRFATLEARMRNIPAIEAVVGDWIAGLPADEVVTLLRQAELPAARIATLPDLLANPYMREARQIVELQHPKAGTVTTHGLTVRLSDSPGEIRHPAPVLGQHTDEVLGEWLGM 382          
BLAST of mRNA_P-wetherbeei_contig18136.1.1 vs. uniprot
Match: UPI00193DB680 (CoA transferase n=1 Tax=Microvirga sp. VF16 TaxID=2807101 RepID=UPI00193DB680)

HSP 1 Score: 429 bits (1104), Expect = 2.580e-146
Identity = 211/381 (55.38%), Postives = 277/381 (72.70%), Query Frame = 1
Query:   40 AAPLDGVRVLDVSRFIAGPYCAMLLGDMGADVIKVEPPGRGENSRAFGPFVEGESLYTMVFNRNKRSLTLDLRSEAGKEVFRDLLRKADVLVENFVAGTLEKMGFDWDTLRGLNPRLIVTRISGFGQTGPLSRKPCFDVIAQTMSGLMDITGEADGRPTMAGTYVVDYSTGMYATIGTLGALQARSRSGTGQIVDVAMLDSAMSMLMTAIPEQMLLGRTMTRRGNRDRYAAPANTFPTSDGAWVHLAPAGDAMFRALAGVMGRAEIADDTRFRNNDARMTNVEALEAIITTWTANLTAAQLLEALATIGVPCAKVARIPDLLENPQLAHRGQILDLPHAKAGTVPMQGFSIRFGDTPMRLNHAPPTLGQHTDEVLDQWLAL 1182
            ++PL G++VLD+SRFIAGP+C MLLGDMGADVIK+E  G G++SR F PF  GESLY+M  NRNKRS+TL+ R +  +++ R++++ ADVLVENF  GT+E MG  WD LR +NPRLI+TR+SGFGQTGP S++P FD IAQ MSGLM++TG  DG P +AGT+ +DY +GMYAT  TL AL AR  +G GQ+VDVA+LDSA+SML TAI  Q+  G T+TR GNRDRY++PAN F T  G ++ +    + +F+ L   MGR ++A D+RF N + R+ N  ALEAII  W   LT  Q LEA++  GVPCAKVA   D+++NPQL HR QI+++ H  AG V M G ++   + P+ +  APP LG+HT EVL +WL L
Sbjct:    3 SSPLQGIKVLDLSRFIAGPHCTMLLGDMGADVIKIEKKGAGDDSRHFPPFQNGESLYSMALNRNKRSITLNFRDKRAQDLLREMVKTADVLVENFRPGTMESMGCGWDDLREINPRLIMTRLSGFGQTGPYSQRPGFDGIAQAMSGLMELTGHPDGPPMLAGTFYIDYMSGMYATTATLAALHARETTGKGQMVDVALLDSAVSMLTTAISTQVNKGLTLTRTGNRDRYSSPANVFKTGSGDFILILSGTNPLFKRLTQAMGREDLAADSRFANVEVRLQNASALEAIIQEWIDTLTIDQALEAISGAGVPCAKVASPADVVKNPQLLHRKQIVEVEHPMAGRVAMSGVTMHLSENPLSIRRAPPRLGEHTGEVLREWLTL 383          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18136.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A494YAS5_9BURK7.230e-15257.36CoA transferase n=1 Tax=Pararobbsia silviterrae Ta... [more]
W9HA37_9PROT4.310e-15155.53Carnitine dehydratase n=2 Tax=Skermanella TaxID=20... [more]
UPI0010C9D1131.680e-14957.45CoA transferase n=1 Tax=Rhodoligotrophos defluvii ... [more]
A0A2T7TW85_9HYPH1.740e-14956.69CoA transferase n=2 Tax=unclassified Microvirga Ta... [more]
UPI001CB5E4E92.000e-14956.25CoA transferase n=1 Tax=Cupriavidus pinatubonensis... [more]
A0A4D8PNI3_AZOBR1.280e-14753.40CoA transferase n=2 Tax=Azospirillum TaxID=191 Rep... [more]
A0A176F2Z7_9RHOB2.860e-14756.20Uncharacterized protein n=1 Tax=Roseovarius sp. HI... [more]
A0A1F4Q0B7_9BACT3.070e-14755.67Uncharacterized protein n=2 Tax=unclassified candi... [more]
UPI001906322F2.490e-14653.56CoA transferase n=2 Tax=Azospirillum TaxID=191 Rep... [more]
UPI00193DB6802.580e-14655.38CoA transferase n=1 Tax=Microvirga sp. VF16 TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18136contigP-wetherbeei_contig18136:185..1375 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1218074.BAXZ01000016_gene3330
PFAMsCoA_transf_3
Model size1191
Max annot lvl28216|Betaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue7.77e-144
EggNOG OGsCOG1804@1|root,COG1804@2|Bacteria,1MU2K@1224|Proteobacteria,2VHFW@28216|Betaproteobacteria,1K0E9@119060|Burkholderiaceae
DescriptionL-carnitine dehydratase bile acid-inducible protein F
Cds size1191
COG categoryC
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186136.9330702-CDS-P-wetherbeei_contig18136:184..13751683186136.9330702-CDS-P-wetherbeei_contig18136:184..1375Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig18136 185..1375 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18136.1.1prot_P-wetherbeei_contig18136.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig18136 185..1375 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig18136.1.1

>prot_P-wetherbeei_contig18136.1.1 ID=prot_P-wetherbeei_contig18136.1.1|Name=mRNA_P-wetherbeei_contig18136.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=397bp
MSERKAPESPSPTAAPLDGVRVLDVSRFIAGPYCAMLLGDMGADVIKVEP
PGRGENSRAFGPFVEGESLYTMVFNRNKRSLTLDLRSEAGKEVFRDLLRK
ADVLVENFVAGTLEKMGFDWDTLRGLNPRLIVTRISGFGQTGPLSRKPCF
DVIAQTMSGLMDITGEADGRPTMAGTYVVDYSTGMYATIGTLGALQARSR
SGTGQIVDVAMLDSAMSMLMTAIPEQMLLGRTMTRRGNRDRYAAPANTFP
TSDGAWVHLAPAGDAMFRALAGVMGRAEIADDTRFRNNDARMTNVEALEA
IITTWTANLTAAQLLEALATIGVPCAKVARIPDLLENPQLAHRGQILDLP
HAKAGTVPMQGFSIRFGDTPMRLNHAPPTLGQHTDEVLDQWLALDAS
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mRNA from alignment at P-wetherbeei_contig18136:185..1375+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig18136.1.1 ID=mRNA_P-wetherbeei_contig18136.1.1|Name=mRNA_P-wetherbeei_contig18136.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1191bp|location=Sequence derived from alignment at P-wetherbeei_contig18136:185..1375+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTCGGAACGCAAAGCGCCTGAATCCCCCTCGCCCACTGCCGCCCCGCT GGATGGCGTGCGCGTGCTGGACGTCTCGCGCTTCATCGCCGGCCCCTACT GCGCCATGCTGCTGGGCGACATGGGCGCCGACGTCATCAAGGTCGAGCCG CCCGGCCGCGGCGAGAACAGCCGCGCCTTCGGCCCCTTCGTCGAAGGCGA GAGCCTCTACACGATGGTGTTCAACCGCAACAAGCGCAGCCTGACGCTGG ACCTGCGCTCCGAGGCCGGCAAGGAGGTGTTCCGTGACCTGCTGCGCAAG GCGGATGTACTGGTCGAGAATTTCGTCGCGGGCACGCTGGAAAAAATGGG CTTCGACTGGGACACCCTGCGCGGCCTCAATCCGCGCCTCATCGTCACGC GCATCTCCGGGTTCGGCCAGACCGGTCCGCTTTCGCGCAAGCCGTGCTTC GATGTCATCGCCCAGACGATGAGCGGCCTGATGGACATCACCGGAGAAGC CGACGGCCGCCCGACCATGGCCGGCACCTATGTGGTGGACTATTCGACGG GCATGTACGCGACCATCGGCACGCTGGGCGCACTGCAGGCGCGCAGCCGC AGTGGGACCGGCCAGATTGTCGACGTCGCCATGCTCGATTCCGCGATGTC GATGCTGATGACCGCGATTCCCGAGCAGATGCTGCTCGGCCGCACCATGA CCCGGCGCGGCAACCGTGACCGCTACGCGGCCCCCGCCAACACATTCCCG ACGAGCGACGGTGCGTGGGTGCATCTCGCACCCGCCGGGGACGCGATGTT CCGCGCGCTCGCCGGCGTCATGGGCCGCGCGGAGATCGCCGACGATACGC GCTTTCGCAACAACGACGCGCGCATGACGAACGTGGAGGCCCTCGAAGCG ATCATCACCACATGGACCGCGAACCTCACCGCCGCGCAGCTGCTGGAGGC CCTGGCCACCATCGGCGTGCCCTGCGCAAAAGTGGCGCGCATTCCGGACT TGCTGGAAAACCCGCAGCTCGCGCACCGTGGGCAGATTCTCGACCTGCCG CATGCGAAAGCGGGCACCGTCCCGATGCAGGGTTTCTCGATTCGCTTCGG CGATACACCCATGCGTCTGAATCACGCGCCGCCAACGCTCGGCCAGCACA CGGACGAAGTGCTCGACCAATGGCTGGCGCTGGATGCCTCA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig18136:185..1375+

>mRNA_P-wetherbeei_contig18136.1.1 ID=mRNA_P-wetherbeei_contig18136.1.1|Name=mRNA_P-wetherbeei_contig18136.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1191bp|location=Sequence derived from alignment at P-wetherbeei_contig18136:185..1375+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTCGGAACGCAAAGCGCCTGAATCCCCCTCGCCCACTGCCGCCCCGCT
GGATGGCGTGCGCGTGCTGGACGTCTCGCGCTTCATCGCCGGCCCCTACT
GCGCCATGCTGCTGGGCGACATGGGCGCCGACGTCATCAAGGTCGAGCCG
CCCGGCCGCGGCGAGAACAGCCGCGCCTTCGGCCCCTTCGTCGAAGGCGA
GAGCCTCTACACGATGGTGTTCAACCGCAACAAGCGCAGCCTGACGCTGG
ACCTGCGCTCCGAGGCCGGCAAGGAGGTGTTCCGTGACCTGCTGCGCAAG
GCGGATGTACTGGTCGAGAATTTCGTCGCGGGCACGCTGGAAAAAATGGG
CTTCGACTGGGACACCCTGCGCGGCCTCAATCCGCGCCTCATCGTCACGC
GCATCTCCGGGTTCGGCCAGACCGGTCCGCTTTCGCGCAAGCCGTGCTTC
GATGTCATCGCCCAGACGATGAGCGGCCTGATGGACATCACCGGAGAAGC
CGACGGCCGCCCGACCATGGCCGGCACCTATGTGGTGGACTATTCGACGG
GCATGTACGCGACCATCGGCACGCTGGGCGCACTGCAGGCGCGCAGCCGC
AGTGGGACCGGCCAGATTGTCGACGTCGCCATGCTCGATTCCGCGATGTC
GATGCTGATGACCGCGATTCCCGAGCAGATGCTGCTCGGCCGCACCATGA
CCCGGCGCGGCAACCGTGACCGCTACGCGGCCCCCGCCAACACATTCCCG
ACGAGCGACGGTGCGTGGGTGCATCTCGCACCCGCCGGGGACGCGATGTT
CCGCGCGCTCGCCGGCGTCATGGGCCGCGCGGAGATCGCCGACGATACGC
GCTTTCGCAACAACGACGCGCGCATGACGAACGTGGAGGCCCTCGAAGCG
ATCATCACCACATGGACCGCGAACCTCACCGCCGCGCAGCTGCTGGAGGC
CCTGGCCACCATCGGCGTGCCCTGCGCAAAAGTGGCGCGCATTCCGGACT
TGCTGGAAAACCCGCAGCTCGCGCACCGTGGGCAGATTCTCGACCTGCCG
CATGCGAAAGCGGGCACCGTCCCGATGCAGGGTTTCTCGATTCGCTTCGG
CGATACACCCATGCGTCTGAATCACGCGCCGCCAACGCTCGGCCAGCACA
CGGACGAAGTGCTCGACCAATGGCTGGCGCTGGATGCCTCA
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