mRNA_P-wetherbeei_contig18131.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig18131.1.1 vs. uniprot
Match: A0A835Z5K4_9STRA (DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5K4_9STRA) HSP 1 Score: 290 bits (741), Expect = 7.560e-91 Identity = 158/257 (61.48%), Postives = 181/257 (70.43%), Query Frame = 1
Query: 193 ETFAELYEGRLPDWLIARLSQLCFERPTLVQRRALEAILPGSDAVIHAQTGSGKTLAFLLPLLAAMDPSRAAVQGLVVVPTRELGLQVAAVAKRLAAATGPATGGRLQVMSVLEGSKNKRQRAWAKAEPPHVIIGNPGNFCALVSSGAIRVNALRFVVVDEVDACMLNPATKANLHDLLSRHLSPTFADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRLPRQTVFASATVPQHRHFLKQCVRNQWT 963
+T+ ELY RLP WLI RL +L F +PTLVQ+RAL+ IL G DAV+HAQTGSGKTLAFL+PL A +DPSRA+VQGLVVVPTRELGLQVAAVAKRLAAATG ATGGR+ VMSVLEGS N+RQRAWA AEPPHV+IGNP ALV+ GA+R N +R+VVVDEVDAC+ + +A L LL+RHLSPTFA R RQTVFASATVPQH HF++QCV QWT
Sbjct: 56 DTYRELYGERLPQWLIERLEELGFAKPTLVQQRALDTILAGHDAVLHAQTGSGKTLAFLVPLFACIDPSRASVQGLVVVPTRELGLQVAAVAKRLAAATGAATGGRVMVMSVLEGSNNRRQRAWAWAEPPHVVIGNPETLSALVAGGAVRCNGVRYVVVDEVDACLRSGDARAALTALLARHLSPTFAQEEEAEVPQLPGGVAVTGAAAAADGARR-----------RVRARQTVFASATVPQHNHFMRQCVAQQWT 301
BLAST of mRNA_P-wetherbeei_contig18131.1.1 vs. uniprot
Match: D8LSP0_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSP0_ECTSI) HSP 1 Score: 284 bits (726), Expect = 1.830e-89 Identity = 157/261 (60.15%), Postives = 184/261 (70.50%), Query Frame = 1
Query: 190 SETFAELYEGRLPDWLIARLSQLCFERPTLVQRRALEAILPGS--DAVIHAQTGSGKTLAFLLPLLAAMDPSRAAVQGLVVVPTRELGLQVAAVAKRLAAATGPATGGRLQVMSVLEGSKNKRQRAWAKAEPPHVIIGNPGNFCALVSSGAIRVNALRFVVVDEVDACMLNPATKANLHDLLSRHLSPTFADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRL-PRQTVFASATVPQHRHFLKQCVRNQWT 963
+ TF EL+ GRLPDWL+ RL QL F PTLVQR+ALE IL DAV+HAQTGSGKTLAFLLPLL +DPSRAAVQGLVVVPTRELGLQVA VAKRLAA T ++QVMSVLEGS NKRQRAWA A+PPH++IGNP + LV++GA+RVNA+ +VVVDEVDAC+L+ T+A+LH+LL+R LSPT AD R+L RQTVFASATVPQH HF++QCV+ QWT
Sbjct: 3 ARTFRELFRGRLPDWLLNRLEQLGFATPTLVQRQALEVILGEEKHDAVLHAQTGSGKTLAFLLPLLGRVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGTSSGRDSKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLSEGTRASLHELLARSLSPTHADEDEGEDEEGAARLAEVGAGRVTGAAAPVN---------RKLRDRQTVFASATVPQHNHFIRQCVQKQWT 254
BLAST of mRNA_P-wetherbeei_contig18131.1.1 vs. uniprot
Match: A0A6H5KF38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF38_9PHAE) HSP 1 Score: 287 bits (735), Expect = 3.090e-88 Identity = 163/271 (60.15%), Postives = 189/271 (69.74%), Query Frame = 1
Query: 160 APASVGAVEGSETFAELYEGRLPDWLIARLSQLCFERPTLVQRRALEAILPGS--DAVIHAQTGSGKTLAFLLPLLAAMDPSRAAVQGLVVVPTRELGLQVAAVAKRLAAATGPATGGRLQVMSVLEGSKNKRQRAWAKAEPPHVIIGNPGNFCALVSSGAIRVNALRFVVVDEVDACMLNPATKANLHDLLSRHLSPTFADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRL-PRQTVFASATVPQHRHFLKQCVRNQWT 963
A A G V G TF EL+ GRLPDWL+ RL QL F PTLVQR+ALE IL DAV+HAQTGSGKTLAFLLPLLA +DPSRAAVQGLVVVPTRELGLQVA VAKRLAA T ++QVMSVLEGS NKRQRAWA A+PPH++IGNP + LV++GA+RVNA+ +VVVDEVDAC+L+ T+A+LH+LL+R LSPT AD R+L RQTVFASATVPQH HF++QCV+ QWT
Sbjct: 162 AAADPGPVNGG-TFRELFRGRLPDWLLTRLEQLGFATPTLVQRQALEVILGEGKHDAVLHAQTGSGKTLAFLLPLLARVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGTSSGRESKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLSEGTRASLHELLARSLSPTHADEDEGEDEEEAVRLAEVGAGRVTGAAAPVN---------RKLRDRQTVFASATVPQHNHFIRQCVQKQWT 422
BLAST of mRNA_P-wetherbeei_contig18131.1.1 vs. uniprot
Match: A0A7S4MVY5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MVY5_9STRA) HSP 1 Score: 245 bits (626), Expect = 3.810e-73 Identity = 138/273 (50.55%), Postives = 175/273 (64.10%), Query Frame = 1
Query: 193 ETFAELYEG-----RLPDWLIARLSQLCFERPTLVQRRALEAILPGSDAVIHAQTGSGKTLAFLLPLLAAMDPSRAAVQGLVVVPTRELGLQVAAVAKRLAAATGPATG--GRLQVMSVLEGSKNKRQRAWAKAEPPHVIIGNPGNFCALVSSGAIRVNALRFVVVDEVDACMLNP---------ATKANLHDLLSRHLSPTFADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRLPRQTVFASATVPQHRHFLKQCVRNQWT 963
E+F ELY LP WL R S+ + PTLVQRR+L+AIL G D VI AQTGSGKTL+FLLPLL+ +D SR+A+Q ++VVPTRELGLQ++ VA+RLAAA+GP T G++ VM +L+GS+NKRQRAWA AEPPHV++G P +VS G IR NA++FVVVDEVDAC+LN A+ LH+LLSR+LSPT+ + RQTVF+SAT+PQH HF++QCV+NQWT
Sbjct: 89 ESFTELYTASSSGEELPLWLTERCSECGWPTPTLVQRRSLDAILTGMDVVIQAQTGSGKTLSFLLPLLSKIDASRSAIQAVIVVPTRELGLQISRVARRLAAASGPDTDAKGKIMVMPILQGSRNKRQRAWAWAEPPHVVVGTPDELTKMVSKGGIRYNAVKFVVVDEVDACLLNNGGSIGMSNLASAGPLHELLSRYLSPTYDEVDVLDGDSASLVSSSAADLAGSSKTVSHGTD-----------RQTVFSSATIPQHNHFMRQCVQNQWT 350
BLAST of mRNA_P-wetherbeei_contig18131.1.1 vs. uniprot
Match: A0A7S2YSE4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YSE4_9STRA) HSP 1 Score: 232 bits (591), Expect = 1.380e-69 Identity = 134/282 (47.52%), Postives = 176/282 (62.41%), Query Frame = 1
Query: 190 SETFAELYEGRLPDWLIARLSQLCFERPTLVQRRALEAILPGS-DAVIHAQTGSGKTLAFLLPLLAAMDPSRAAVQGLVVVPTRELGLQVAAVAKRLAAAT---------GPATGG------RLQVMSVLEGSKNKRQRAWAKAEPPHVIIGNPGNFCALVSSGAI-RVNALRFVVVDEVDACMLNPA-------TKANLHDLLSRHLSPTFADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRLPRQTVFASATVPQHRHFLKQCVRNQWT 963
++TF+ELYE +P WL+ R + +E PT +Q +AL AIL DA++ A+TGSGKTL++LLP +AA+D SR+AVQ L+VVPTRELGLQV VAKRLAAA+ P G ++ VM+VL+GS+N+RQRAWA AEPPH++IG P C +V G I R N++++VVVDEVDAC+LN A + + LH+LLS++LSPTF D RQT+FASAT+PQHRHFLKQC++NQWT
Sbjct: 128 NQTFSELYESFIPSWLLKRCEECGWESPTRIQEKALNAILRDKKDAIVQAETGSGKTLSYLLPAMAAVDSSRSAVQVLIVVPTRELGLQVGRVAKRLAAASYNQDPDIGQDPDVGNAGKPQKKIMVMNVLQGSQNRRQRAWAWAEPPHIVIGTPQELCDMVRYGGIKRYNSVKYVVVDEVDACLLNNAGSMTAKLSSSTLHELLSKYLSPTFDDGSSANEENGIREVAKSGTQQIQSRPLSET-------------RQTIFASATIPQHRHFLKQCIQNQWT 396
BLAST of mRNA_P-wetherbeei_contig18131.1.1 vs. uniprot
Match: B7FRY7_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FRY7_PHATC) HSP 1 Score: 234 bits (596), Expect = 1.860e-68 Identity = 135/272 (49.63%), Postives = 172/272 (63.24%), Query Frame = 1
Query: 190 SETFAELYEGRLPDWLIARLSQLCFERPTLVQRRALEAIL-PGSDAVIHAQTGSGKTLAFLLPLLAAMDPSRAAVQGLVVVPTRELGLQVAAVAKRLAAATGP-----ATGGRLQVMSVLEGSKNKRQRAWAKAEPPHVIIGNPGNFCALVSSGAI-RVNALRFVVVDEVDACMLNPA-------TKANLHDLLSRHLSPTFADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRLPRQTVFASATVPQHRHFLKQCVRNQWT 963
+E+F Y LP WLI + ++ + P+ +Q +AL+AIL DAV+ A+TGSGKTLA+LLP LA++D SRAAVQ L+VVPTRELGLQVA VAKRLAAA+ GGR+ VMSVL+GS+N+RQRAWA AEPPH++IG P C +V G I R N+++F+VVDEVDAC+LN A + LH+LLS++LSPT+ D RQT+FASAT+PQHRHFLKQC +NQWT
Sbjct: 131 AESFESRYAAVLPSWLIQKCAECGWTHPSRIQEKALDAILFERRDAVVQAETGSGKTLAYLLPALASIDGSRAAVQALIVVPTRELGLQVARVAKRLAAASTQNDNVTLNGGRIMVMSVLQGSQNRRQRAWAWAEPPHLVIGTPQELCDMVKLGGIKRYNSVKFIVVDEVDACLLNNAGSLTSNLASSTLHELLSKYLSPTYDDGSANEADDNVLRSVKTSTKTATSTRPLSSQ------------RQTIFASATIPQHRHFLKQCAQNQWT 390
BLAST of mRNA_P-wetherbeei_contig18131.1.1 vs. uniprot
Match: A0A7S4J1Z4_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J1Z4_9STRA) HSP 1 Score: 218 bits (554), Expect = 4.350e-65 Identity = 118/203 (58.13%), Postives = 149/203 (73.40%), Query Frame = 1
Query: 193 ETFAELYEG-----RLPDWLIARLSQLCFERPTLVQRRALEAILPGSDAVIHAQTGSGKTLAFLLPLLAAMDPSRAAVQGLVVVPTRELGLQVAAVAKRLAAATGPATG--GRLQVMSVLEGSKNKRQRAWAKAEPPHVIIGNPGNFCALVSSGAIRVNALRFVVVDEVDACMLNP---------ATKANLHDLLSRHLSPTF 753
E+F ELY LP WL R S+ + PTLVQRR+L+AIL G D VI AQTGSGKTL+FLLPLL+ +D SR+A+Q ++VVPTRELGLQ++ VA+RLAAA+GP T G++ VM +L+GS+NKRQRAWA AEPPHV++G P +VS G IR NA++FVVVDEVDAC+LN A+ LH+LLSR+LSPT+
Sbjct: 89 ESFTELYTASSSGEELPLWLTERCSECGWPTPTLVQRRSLDAILTGMDVVIQAQTGSGKTLSFLLPLLSKIDASRSAIQAVIVVPTRELGLQISRVARRLAAASGPDTDAKGKIMVMPILQGSRNKRQRAWAWAEPPHVVVGTPDELTKMVSKGGIRYNAVKFVVVDEVDACLLNNGGSIGMSNLASAGPLHELLSRYLSPTY 291
BLAST of mRNA_P-wetherbeei_contig18131.1.1 vs. uniprot
Match: W7TME3_9STRA (RNA helicase, DEAD-box type n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TME3_9STRA) HSP 1 Score: 223 bits (568), Expect = 1.930e-64 Identity = 129/302 (42.72%), Postives = 172/302 (56.95%), Query Frame = 1
Query: 190 SETFAELYEGRLPDWLIARLSQLCFERPTLVQRRALEAILPGSDAVIHAQTGSGKTLAFLLPLLAAMDPSRAAVQGLVVVPTRELGLQVAAVAKRLAA-------------------------------------ATGPATGGRLQVMSVLEGSKNKRQRAWAKAEPPHVIIGNPGNFCALVSSGAIRVNALRFVVVDEVDACMLNPATKANLHDLLSRHLSPTF--ADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRLP-----RQTVFASATVPQHRHFLKQCVRNQWT 963
+ETF++LY RLP WL+AR+ L + RPT VQ+ AL AIL G D V+H+QTG+GKTLAF+LPLLA +D ++ AVQ LVVVP+RELGLQVA+VAK+LA+ A+ ++ +MS+LEGSKN+RQ+AW AEPPHV+IGNP + LV G IR + ++ VVVDEVDAC+ +P T L LL ++LSP+F A+ + P RQT+F SA++PQH+HF+KQCV+ QWT
Sbjct: 115 AETFSQLYGDRLPSWLLARVESLGYTRPTAVQKEALGAILEGEDVVVHSQTGTGKTLAFMLPLLAGIDVNKNAVQALVVVPSRELGLQVASVAKQLASGHMYYRGEDGQEEGRDAENEDPERREEGVGSESMTAGASNVRAAKKILIMSLLEGSKNRRQKAWVLAEPPHVVIGNPRSLAQLVERGGIRYHQVKMVVVDEVDACLTSPETGRELQGLLGKYLSPSFLTAELEEEATATGGSSKDEEGPLLPQGAMKDGGGEKGGRVARKLAPWKLVHRQTLFVSASIPQHKHFIKQCVQQQWT 416
BLAST of mRNA_P-wetherbeei_contig18131.1.1 vs. uniprot
Match: A0A7S3VGM2_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VGM2_9STRA) HSP 1 Score: 221 bits (563), Expect = 2.240e-64 Identity = 127/274 (46.35%), Postives = 175/274 (63.87%), Query Frame = 1
Query: 190 SETFAELYEGRLPDWLIARLSQLCFERPTLVQRRALEAIL-PGSDAVIHAQTGSGKTLAFLLPLLAAMDPSRAAVQGLVVVPTRELGLQVAAVAKRLAAATGPA-TGGRLQVMSVLEGSKNKRQRAWAKAEPPHVIIGNPGNFCALVSSGAIRVNALRFVVVDEVDACMLNP-----ATKAN----------LHDLLSRHLSPTFADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRLPRQTVFASATVPQHRHFLKQCVRNQW 960
+ETFAE + +P WL +R + ++ PTL+Q RA++AIL G+D +I AQTGSGKTL +LLPLL+ +DP+R+++QG++VVPTRELG+QVA VA+RLAA + + TG ++ VMSVL+GS NKRQRAWA+++PPHV+IG P +V ++ +A++FVVVDEVDAC+LN ++K++ LH+LLSR+LSPTF + RQTVF SAT+PQH HFLK CV+NQW
Sbjct: 56 NETFAEHFP-TMPRWLSSRADECGWKNPTLIQHRAIDAILNDGNDVIIQAQTGSGKTLGYLLPLLSRIDPTRSSIQGIIVVPTRELGVQVARVARRLAAGSVDSETGAKIMVMSVLQGSGNKRQRAWARSDPPHVVIGTPRELGDIVKRKGMKYHAVKFVVVDEVDACLLNNQGTIVSSKSSKSLNVSGSGPLHELLSRYLSPTFEEAEDEEVIQQLSLVEGGGSRIVSHGTD----------------RQTVFVSATIPQHNHFLKSCVQNQW 312
BLAST of mRNA_P-wetherbeei_contig18131.1.1 vs. uniprot
Match: A0A1Z5KA53_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KA53_FISSO) HSP 1 Score: 211 bits (538), Expect = 6.130e-61 Identity = 127/275 (46.18%), Postives = 167/275 (60.73%), Query Frame = 1
Query: 169 SVGAVEGSETFAELYEGRLPDWLIARLSQLCFERPTLVQRRALEAILPGS---DAVIHAQTGSGKTLAFLLPLLAAMDPSRAAVQGLVVVPTRELGLQVAAVAKRLAAATGPATGGRLQVMSVLEGSKNKRQRAWAKAEPPHVIIGNPGNFCALVSSGAI-RVNALRFVVVDEVDACMLNPA-----TKANLHDLLSRHLSPTFADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRL-PRQTVFASATVPQHRHFLKQCVRNQWT 963
S GA++ ++T + Y+ +LP WL+ R L + PT +Q AL+ +L D VI A+TGSGKTL +LLP LAA+DP+R+ VQ ++VVPTRELGLQVA VAKRL AA+ ++ +MSVL+GS+N+RQRAWA AEPP V+IG P +V G I R N++ VVVDEVDAC+LN A + LH+LLS+ LS TF D RRL RQT+ SAT+PQH+HF+KQCV+N+WT
Sbjct: 50 SDGALDQTDTLLQRYQYQLPSWLLQRCQDLGYIHPTRIQIAALDVLLLDEHKPDVVIQAETGSGKTLCYLLPTLAAIDPTRSTVQAILVVPTRELGLQVAKVAKRLVAASPH----KIYIMSVLQGSQNRRQRAWAWAEPPQVVIGTPEELSKMVQLGGIKRYNSIEMVVVDEVDACLLNNAGSLQLAASPLHELLSKQLSATFLDKDEVEDTMGALSSTRPK---------------------RRLHARQTILCSATIPQHKHFIKQCVQNRWT 299 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18131.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig18131.1.1 >prot_P-wetherbeei_contig18131.1.1 ID=prot_P-wetherbeei_contig18131.1.1|Name=mRNA_P-wetherbeei_contig18131.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=321bp MPAQAFSLSSCGPGEKGGARDSSRWRGEFSRHRRRPACAAVTAEAAAAPGback to top mRNA from alignment at P-wetherbeei_contig18131:47..1375+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig18131.1.1 ID=mRNA_P-wetherbeei_contig18131.1.1|Name=mRNA_P-wetherbeei_contig18131.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1329bp|location=Sequence derived from alignment at P-wetherbeei_contig18131:47..1375+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig18131:47..1375+ >mRNA_P-wetherbeei_contig18131.1.1 ID=mRNA_P-wetherbeei_contig18131.1.1|Name=mRNA_P-wetherbeei_contig18131.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=963bp|location=Sequence derived from alignment at P-wetherbeei_contig18131:47..1375+ (Phaeothamnion wetherbeei SAG_119_79)back to top |