mRNA_P-wetherbeei_contig18106.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig18106.2.1 vs. uniprot
Match: A0A182GEU4_AEDAL (Uncharacterized protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GEU4_AEDAL) HSP 1 Score: 59.3 bits (142), Expect = 2.520e-8 Identity = 36/91 (39.56%), Postives = 53/91 (58.24%), Query Frame = 3
Query: 9 SFWSRLRRSMARSMMEAEYMALFEAAQTAVLLRGVLEHTCAEPPAEPTVMREDNLSCITASMASMHTRHLHHICIRYHWLRKQIRDGAISV 281
S+ SR + + S MEAEY+AL EAAQ AV LRG+L+ E +PTV+ EDN SC+ ++ + H+ RYH+ R+ + I +
Sbjct: 127 SWTSRKQTCVTMSTMEAEYVALSEAAQEAVWLRGLLKELN-EEQTKPTVIFEDNRSCLDFAVLDQQRKRSKHVDTRYHYTRELVTQKQIEL 216
BLAST of mRNA_P-wetherbeei_contig18106.2.1 vs. uniprot
Match: A0A182G3L3_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Aedes albopictus TaxID=7160 RepID=A0A182G3L3_AEDAL) HSP 1 Score: 57.0 bits (136), Expect = 2.610e-7 Identity = 36/91 (39.56%), Postives = 50/91 (54.95%), Query Frame = 3
Query: 9 SFWSRLRRSMARSMMEAEYMALFEAAQTAVLLRGVLEHTCAEPPAEPTVMREDNLSCITASMASMHTRHLHHICIRYHWLRKQIRDGAISV 281
S+ SR + +A S MEAEY+AL EA+ V LR +L+ E +PTV+ EDN SC+ H + HI RYH+ R+ G I +
Sbjct: 372 SWSSRKQSCVATSTMEAEYVALSEASHEVVWLRSLLKELN-EEQVKPTVVFEDNRSCLDFVALDQHKKRTKHIDTRYHYTRELSASGVIEL 461
BLAST of mRNA_P-wetherbeei_contig18106.2.1 vs. uniprot
Match: A0A8D7ZWP4_CULPI (Copia protein n=1 Tax=Culex pipiens TaxID=7175 RepID=A0A8D7ZWP4_CULPI) HSP 1 Score: 55.8 bits (133), Expect = 6.400e-7 Identity = 37/91 (40.66%), Postives = 49/91 (53.85%), Query Frame = 3
Query: 9 SFWSRLRRSMARSMMEAEYMALFEAAQTAVLLRGVLEHTCAEPPAEPTVMREDNLSCITASMASMHTRHLHHICIRYHWLRKQIRDGAISV 281
S+ SR + +A S MEAEY+AL EAAQ AV LR +L E EPT+M EDN SCI + HI +Y+ + + G I +
Sbjct: 262 SWGSRKQNCVATSTMEAEYVALSEAAQEAVWLRRLLCEL-GEEQKEPTIMNEDNRSCIDFVSQDRQNKRSKHIDTKYYHAKDLVTGGVIQL 351
BLAST of mRNA_P-wetherbeei_contig18106.2.1 vs. uniprot
Match: A0A8D8IMC2_CULPI (Copia protein n=1 Tax=Culex pipiens TaxID=7175 RepID=A0A8D8IMC2_CULPI) HSP 1 Score: 54.3 bits (129), Expect = 8.170e-7 Identity = 34/88 (38.64%), Postives = 49/88 (55.68%), Query Frame = 3
Query: 18 SRLRRSMARSMMEAEYMALFEAAQTAVLLRGVLEHTCAEPPAEPTVMREDNLSCITASMASMHTRHLHHICIRYHWLRKQIRDGAISV 281
SR + +A S MEAEY+AL EAA+ AV +R +L E P PT++ EDN SC+ ++ + HI RYH+ + G I +
Sbjct: 46 SRKQTCVAMSTMEAEYVALSEAAREAVWMRRLLTELN-ETPKLPTIIYEDNRSCLDFAVMDQQKKRSKHIDTRYHYTKHCCSSGEIEL 132
BLAST of mRNA_P-wetherbeei_contig18106.2.1 vs. uniprot
Match: A0A182GHA5_AEDAL (Uncharacterized protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GHA5_AEDAL) HSP 1 Score: 52.8 bits (125), Expect = 1.160e-6 Identity = 31/77 (40.26%), Postives = 42/77 (54.55%), Query Frame = 3
Query: 51 MEAEYMALFEAAQTAVLLRGVLEHTCAEPPAEPTVMREDNLSCITASMASMHTRHLHHICIRYHWLRKQIRDGAISV 281
MEAEY+AL EA+ V LR +L+ E +PTV+ EDN SC+ H + HI RYH+ R+ G I +
Sbjct: 1 MEAEYVALSEASHEVVWLRSLLKELN-EEQVKPTVVFEDNRSCLDFVALDQHKKRTKHIDTRYHYTRELSASGVIEL 76
BLAST of mRNA_P-wetherbeei_contig18106.2.1 vs. uniprot
Match: A0A427XXX1_9TREE (Uncharacterized protein n=2 Tax=Saitozyma podzolica TaxID=1890683 RepID=A0A427XXX1_9TREE) HSP 1 Score: 53.1 bits (126), Expect = 2.290e-6 Identity = 34/86 (39.53%), Postives = 50/86 (58.14%), Query Frame = 3
Query: 18 SRLRRSMARSMMEAEYMALFEAAQTAVLLRGVLEHTCAEPPAEPTVMREDNLSCITASMASMHTRHLHHICIRYHWLRKQIRDGAI 275
SR + ++A S +EAEY+A+ EAA+ AV L+G+L+ P EPT + DN I + R HI IR+H +R+ I DG +
Sbjct: 48 SRRQATVASSTVEAEYVAVSEAAREAVWLKGLLDELGVTPK-EPTPLWCDNQGAIRLARNPGTHRRTKHIAIRWHLIRELIEDGVV 132
BLAST of mRNA_P-wetherbeei_contig18106.2.1 vs. uniprot
Match: A0A182H432_AEDAL (Uncharacterized protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182H432_AEDAL) HSP 1 Score: 52.0 bits (123), Expect = 3.190e-6 Identity = 36/91 (39.56%), Postives = 48/91 (52.75%), Query Frame = 3
Query: 9 SFWSRLRRSMARSMMEAEYMALFEAAQTAVLLRGVLEHTCAEPPAEPTVMREDNLSCITASMASMHTRHLHHICIRYHWLRKQIRDGAISV 281
S+ SR + ++ S MEAEY+AL EAAQ AV LR +L+ AE +PT + EDN SCI + HI R H + G I +
Sbjct: 8 SWGSRKQNCVSMSTMEAEYVALSEAAQEAVWLRRLLDELGAEQE-QPTKINEDNRSCIDFVSLDRQNKRSKHIDTRRHHAKDLCAKGVIQL 97
BLAST of mRNA_P-wetherbeei_contig18106.2.1 vs. uniprot
Match: A0A427YPN6_9TREE (Uncharacterized protein n=1 Tax=Saitozyma podzolica TaxID=1890683 RepID=A0A427YPN6_9TREE) HSP 1 Score: 53.1 bits (126), Expect = 3.260e-6 Identity = 34/86 (39.53%), Postives = 50/86 (58.14%), Query Frame = 3
Query: 18 SRLRRSMARSMMEAEYMALFEAAQTAVLLRGVLEHTCAEPPAEPTVMREDNLSCITASMASMHTRHLHHICIRYHWLRKQIRDGAI 275
SR + ++A S +EAEY+A+ EAA+ AV L+G+L+ P EPT + DN I + R HI IR+H +R+ I DG +
Sbjct: 11 SRRQATVASSTVEAEYVAVSEAAREAVWLKGLLDELGVTPK-EPTPLWCDNQGAIRLARNPGTHRRTKHIAIRWHLIRELIEDGVV 95
BLAST of mRNA_P-wetherbeei_contig18106.2.1 vs. uniprot
Match: A0A7D9DPP1_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=4 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9DPP1_PARCT) HSP 1 Score: 53.9 bits (128), Expect = 3.350e-6 Identity = 31/92 (33.70%), Postives = 52/92 (56.52%), Query Frame = 3
Query: 9 SFWSRLRRSMARSMMEAEYMALFEAAQTAVLLRGVLEHTCAEPPAEPTVMREDNLSCITASMASMHTRHLHHICIRYHWLRKQIRDGAISVV 284
S+ S+ + S+ +S EAEY+AL +A Q A+ +RG+L + EPT M EDN I S + HI +R+H++R+++ + V+
Sbjct: 1157 SWCSKKQASVTKSTTEAEYVALSQATQEAIWMRGLLSDIGCKSE-EPTTMYEDNQGAIEISKNARFHNRTKHIDVRFHFVREKVLSNEVKVI 1247
BLAST of mRNA_P-wetherbeei_contig18106.2.1 vs. uniprot
Match: A0A182GC71_AEDAL (Uncharacterized protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GC71_AEDAL) HSP 1 Score: 52.0 bits (123), Expect = 3.670e-6 Identity = 34/88 (38.64%), Postives = 47/88 (53.41%), Query Frame = 3
Query: 18 SRLRRSMARSMMEAEYMALFEAAQTAVLLRGVLEHTCAEPPAEPTVMREDNLSCITASMASMHTRHLHHICIRYHWLRKQIRDGAISV 281
SR + +A S MEAEY+AL EA Q AV LR +L E +PT++ EDN SC+ + HI R+H+ R + G I +
Sbjct: 13 SRKQSCVAMSTMEAEYVALSEATQEAVWLRRLLTELN-EIQRQPTIIFEDNRSCLDFVALDQQKKRSKHIDTRFHYTRSRCTSGDIEL 99 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18106.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig18106.2.1 >prot_P-wetherbeei_contig18106.2.1 ID=prot_P-wetherbeei_contig18106.2.1|Name=mRNA_P-wetherbeei_contig18106.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=87bp MARSMMEAEYMALFEAAQTAVLLRGVLEHTCAEPPAEPTVMREDNLSCITback to top mRNA from alignment at P-wetherbeei_contig18106:733..1034- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig18106.2.1 ID=mRNA_P-wetherbeei_contig18106.2.1|Name=mRNA_P-wetherbeei_contig18106.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=302bp|location=Sequence derived from alignment at P-wetherbeei_contig18106:733..1034- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig18106:733..1034- >mRNA_P-wetherbeei_contig18106.2.1 ID=mRNA_P-wetherbeei_contig18106.2.1|Name=mRNA_P-wetherbeei_contig18106.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=261bp|location=Sequence derived from alignment at P-wetherbeei_contig18106:733..1034- (Phaeothamnion wetherbeei SAG_119_79)back to top |