mRNA_P-wetherbeei_contig1810.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1810.1.1 vs. uniprot
Match: A0A7S4A0P4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A0P4_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 1.300e-7 Identity = 32/70 (45.71%), Postives = 43/70 (61.43%), Query Frame = 1
Query: 949 KRNRGSYRCSKCGEPKKGHKCAFVAKRRKNEGAVEAEMKLGVDAFAQAEMDSNMTTRMLNLPRQGYPESY 1158
+RNR +YRCSKCG+PK+GH C + + K+ A + +A Q EMD + R L+L QGYPESY
Sbjct: 22 RRNRTNYRCSKCGQPKRGHVCPYQPRVVKDPTAPAVPTR---NAAVQVEMDERLAVRHLSLAAQGYPESY 88
BLAST of mRNA_P-wetherbeei_contig1810.1.1 vs. uniprot
Match: A0A7S2V728_9STRA (Hypothetical protein (Fragment) n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V728_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 1.520e-7 Identity = 35/73 (47.95%), Postives = 46/73 (63.01%), Query Frame = 1
Query: 946 AKRNRGSYRCSKCGEPKKGHKCAFVAK--RRKNEGAVEAEMKLGVDAFAQAEMDSNMTTRMLNLPRQGYPESY 1158
A+RNRG+YRCS+CG PKKGH C + A+ RR + ++ M + Q E+D MT RML+L QG P SY
Sbjct: 77 ARRNRGNYRCSRCGAPKKGHICPYQARYRRRDQQENGQSVMVPTSNGACQVELDPYMTVRMLDLRLQGAPASY 149
BLAST of mRNA_P-wetherbeei_contig1810.1.1 vs. uniprot
Match: A0A6U6CJ73_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6CJ73_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 7.280e-7 Identity = 35/70 (50.00%), Postives = 40/70 (57.14%), Query Frame = 1
Query: 952 RNRGSYRCSKCGEPKKGHKCAFVAKRRKNEGAVEAEMKLGVDAFAQAEMDSNMTTRMLNLPRQGYPESYM 1161
+ RGSYRC KCG PKKGH C + K ++ EMK A Q EMD + R LNL QG PESYM
Sbjct: 352 KGRGSYRCGKCGVPKKGHVCPYQPKLKRRPDEPPPEMK---SASTQVEMDEFLVLRRLNLEIQGLPESYM 418
BLAST of mRNA_P-wetherbeei_contig1810.1.1 vs. uniprot
Match: A0A7S3PWC9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PWC9_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 8.440e-7 Identity = 33/69 (47.83%), Postives = 41/69 (59.42%), Query Frame = 1
Query: 952 RNRGSYRCSKCGEPKKGHKCAFVAKRRKNEGAVEAEMKLGVDAFAQAEMDSNMTTRMLNLPRQGYPESY 1158
+ RGSYRC KCG PKKGH C + K ++ EM+ +A Q EMD + R LNL QG+PESY
Sbjct: 206 KGRGSYRCGKCGVPKKGHICPYQPKLKRRADEPPPEMR---NAATQVEMDEFLVVRRLNLEIQGFPESY 271
BLAST of mRNA_P-wetherbeei_contig1810.1.1 vs. uniprot
Match: A0A448Z660_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z660_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 9.650e-7 Identity = 34/69 (49.28%), Postives = 41/69 (59.42%), Query Frame = 1
Query: 952 RNRGSYRCSKCGEPKKGHKCAFVAKRRKNEGAVEAEMKLGVDAFAQAEMDSNMTTRMLNLPRQGYPESY 1158
+ RGSY+C +CG PKKGH C + K + G EM+ A Q EMD MT R LNL QG+PESY
Sbjct: 296 KGRGSYKCGRCGAPKKGHVCPYQPKLTRKVGEPLPEMR---SAAIQVEMDEFMTLRRLNLRIQGFPESY 361
BLAST of mRNA_P-wetherbeei_contig1810.1.1 vs. uniprot
Match: A0A1E7F4G0_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F4G0_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 9.650e-7 Identity = 34/69 (49.28%), Postives = 41/69 (59.42%), Query Frame = 1
Query: 952 RNRGSYRCSKCGEPKKGHKCAFVAKRRKNEGAVEAEMKLGVDAFAQAEMDSNMTTRMLNLPRQGYPESY 1158
+ RGSY+C +CG PKKGH C + K + G EM+ A Q EMD MT R LNL QG+PESY
Sbjct: 294 KGRGSYKCGRCGVPKKGHVCPYQPKLTRKVGEPLPEMR---SAAIQVEMDEFMTLRRLNLKIQGFPESY 359
BLAST of mRNA_P-wetherbeei_contig1810.1.1 vs. uniprot
Match: A0A7S1YZC1_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YZC1_TRICV) HSP 1 Score: 62.0 bits (149), Expect = 1.050e-6 Identity = 32/67 (47.76%), Postives = 40/67 (59.70%), Query Frame = 1
Query: 958 RGSYRCSKCGEPKKGHKCAFVAKRRKNEGAVEAEMKLGVDAFAQAEMDSNMTTRMLNLPRQGYPESY 1158
RGSYRC KCG PKKGH C + K ++ EM+ +A Q EMD + R LN+ QG+PESY
Sbjct: 89 RGSYRCGKCGVPKKGHVCPYQPKLKRRPDEPPPEMR---NASTQVEMDEFLVLRRLNIEIQGFPESY 152
BLAST of mRNA_P-wetherbeei_contig1810.1.1 vs. uniprot
Match: B8C977_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C977_THAPS) HSP 1 Score: 63.5 bits (153), Expect = 1.420e-6 Identity = 43/113 (38.05%), Postives = 55/113 (48.67%), Query Frame = 1
Query: 952 RNRGSYRCSKCGEPKKGHKCAFVAKRRKNEGAVEAEMKLGVDAFAQAEMDSNMTTRMLNLPRQGYPESYMPGGGLAMSGXXXXXXGDVDEMVGPGDHHGGPPSGIGAPHPWQP 1290
+ RGSY+C +CG PKKGH C + K ++ EMK Q EMD MT R LN+ QGYPESY + +MVG HH PP+ + + HP P
Sbjct: 338 KGRGSYKCGRCGVPKKGHVCPYQPKVKRRPDDPMPEMKC---VSTQVEMDEFMTLRRLNIEFQGYPESYAA---------------EPMDMVGSEVHHPHPPAALSS-HPPAP 431
BLAST of mRNA_P-wetherbeei_contig1810.1.1 vs. uniprot
Match: A0A7S3NM57_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NM57_9STRA) HSP 1 Score: 59.3 bits (142), Expect = 2.050e-6 Identity = 36/92 (39.13%), Postives = 48/92 (52.17%), Query Frame = 1
Query: 889 TSEYNGST--GXXXXXXXXXXAKRNRGSYRCSKCGEPKKGHKCAFVAKRRKNEGAVEAEMKLGVDAFAQAEMDSNMTTRMLNLPRQGYPESY 1158
T YNGS G +RNR +YRCSKCG+PK+GH C + + + +G E + Q E+DS + R L+L QG PESY
Sbjct: 14 TLSYNGSQDGGSGTGRQSQAQKRRNRTNYRCSKCGQPKRGHICPYQPRILRADGEKPPETRT---VGCQIEIDSRLVVRHLDLQAQGLPESY 102
BLAST of mRNA_P-wetherbeei_contig1810.1.1 vs. uniprot
Match: A0A7S1VGY4_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VGY4_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 2.180e-6 Identity = 33/69 (47.83%), Postives = 41/69 (59.42%), Query Frame = 1
Query: 952 RNRGSYRCSKCGEPKKGHKCAFVAKRRKNEGAVEAEMKLGVDAFAQAEMDSNMTTRMLNLPRQGYPESY 1158
+ RGSYRC +CG PKKGH C + K ++ M+ +A Q EMD MT R LNL QG+PESY
Sbjct: 307 KGRGSYRCGRCGVPKKGHVCPYQPKLKRRPDEPPPVMR---NAALQVEMDEFMTVRRLNLEIQGFPESY 372 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1810.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1810.1.1 >prot_P-wetherbeei_contig1810.1.1 ID=prot_P-wetherbeei_contig1810.1.1|Name=mRNA_P-wetherbeei_contig1810.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=744bp MAFRGSPQDGHSRQAMEDPGVGEEGAYAHARGGGGPRGMPGLPNLDRGAYback to top mRNA from alignment at P-wetherbeei_contig1810:416..3513- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1810.1.1 ID=mRNA_P-wetherbeei_contig1810.1.1|Name=mRNA_P-wetherbeei_contig1810.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3098bp|location=Sequence derived from alignment at P-wetherbeei_contig1810:416..3513- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1810:416..3513- >mRNA_P-wetherbeei_contig1810.1.1 ID=mRNA_P-wetherbeei_contig1810.1.1|Name=mRNA_P-wetherbeei_contig1810.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2232bp|location=Sequence derived from alignment at P-wetherbeei_contig1810:416..3513- (Phaeothamnion wetherbeei SAG_119_79)back to top |