mRNA_P-wetherbeei_contig18092.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig18092.1.1
Unique NamemRNA_P-wetherbeei_contig18092.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig18092.1.1 vs. uniprot
Match: A0A3R7DAZ1_9BACT (SDR family oxidoreductase n=1 Tax=Candidatus Parcubacteria bacterium TaxID=2762014 RepID=A0A3R7DAZ1_9BACT)

HSP 1 Score: 311 bits (798), Expect = 1.960e-103
Identity = 155/279 (55.56%), Postives = 200/279 (71.68%), Query Frame = 1
Query:    1 MLQNKTVLITGGSLGIGQATALECARQGARVVVVSRGKDALLGTLAQLESISAAGHAVHSFDVGKSEDVLKLGRELAG--SRVDGLVNCAGIYGPIGPLGELELNDFAETLRVNLLGTVQMCQTLLPLLRAATRGKIVNLSGGGAATPFPNYSAYACSKVAIVRFTENLSLEYPE--LDVNCVAPGFVLTRLHEATLQAGPGKASPQFYASTQQQIEKGGVPPEKAAHLISWLLSETSDGVTGKFLSAPWDPWEQSDFQAKLRQDKNFATLRRIDDKGF 825
            +L  K ++ITGGSLGIG   A +     ARV++ +R +  L   L  +  IS  GH ++  DVG+ ++V       A     ++GLVNCAG+YGPIG L ++++  F E +R+NLLGTV MC   +P+++AATR KI+N SGGGAATPFP+Y AYA SK+AIVRFTENL+LE  +   DVNCVAPGFV+TRLH+ TL AGP  A   FY +T++QIE GGVP EKAA+L  +LLSE SDG+TGKF+SAPWD WE+  F+ +LR DK+FATLRRIDDK F
Sbjct:    3 VLDLKNIVITGGSLGIGLEIAKKAVTASARVIIAARNEGDLKKALEDVRRISDNGHQIYKIDVGQYDEVRTFASWCAERFGTIEGLVNCAGVYGPIGKLPQIDIKKFDEAIRINLLGTVYMCHAFIPIMKAATRKKIINYSGGGAATPFPHYMAYATSKIAIVRFTENLALEMSDDGFDVNCVAPGFVITRLHQDTLSAGPELAQQSFYENTKKQIESGGVPAEKAANLTVYLLSEASDGITGKFISAPWDAWEEEAFRERLRIDKDFATLRRIDDKTF 281          
BLAST of mRNA_P-wetherbeei_contig18092.1.1 vs. uniprot
Match: A0A6L4Y7S9_9BACT (Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) n=1 Tax=bacterium TaxID=1869227 RepID=A0A6L4Y7S9_9BACT)

HSP 1 Score: 303 bits (776), Expect = 4.260e-100
Identity = 154/281 (54.80%), Postives = 197/281 (70.11%), Query Frame = 1
Query:    1 MLQNKTVLITGGSLGIGQATALECARQGARVVVVSRGKDALLGTLAQLESISAAGHAVHSFDVGKSEDVLKLG----RELAGSRVDGLVNCAGIYGPIGPLGELELNDFAETLRVNLLGTVQMCQTLLPLLRAATRGKIVNLSGGGAATPFPNYSAYACSKVAIVRFTENLSLEYPE--LDVNCVAPGFVLTRLHEATLQAGPGKASPQFYASTQQQIEKGGVPPEKAAHLISWLLSETSDGVTGKFLSAPWDPWEQSDFQAKLRQDKNFATLRRIDDKGF 825
            +L  KT++ITGGSLGIG   A  CA +GA + + +R K  L   LA L+ IS   H V+S DV   E+V        ++L G  V GLVNCAG+YGPIG   ++++  F E + +N LGTV MC   +PLL++    KIVN SGGGAA+PFPN+SAYA SK+AIVRFTENLS+E  +   D+NC+APGFV+TRLH+ TL AGP  A+  F  +T++QI  GGVPPEKA  L  +LLS  SDG+TGKF+SAPWDPW + +FQ +LR D++FATLRRIDDK F
Sbjct:    3 VLDAKTIVITGGSLGIGLEIAKGCASEGASITIAARDKGNLQNALAILKEISDRDHHVYSLDVSTYEEVKSFAQWCSKQLGG--VHGLVNCAGVYGPIGKSHQVQMEKFKEAIEINFLGTVYMCHAFIPLLKSTRGKKIVNYSGGGAASPFPNFSAYATSKIAIVRFTENLSVELSDDGFDINCIAPGFVITRLHQDTLAAGPELATNAFLENTKKQIASGGVPPEKALGLTVFLLSAESDGITGKFISAPWDPWREKEFQKRLRADRDFATLRRIDDKTF 281          
BLAST of mRNA_P-wetherbeei_contig18092.1.1 vs. uniprot
Match: A0A1Z9NIT1_9BACT (Uncharacterized protein n=1 Tax=bacterium TMED217 TaxID=1986780 RepID=A0A1Z9NIT1_9BACT)

HSP 1 Score: 296 bits (759), Expect = 1.620e-97
Identity = 144/280 (51.43%), Postives = 198/280 (70.71%), Query Frame = 1
Query:    4 LQNKTVLITGGSLGIGQATALECARQGARVVVVSRGKDALLGTLAQLESISAAGHAVHSFDVGKSEDVLKLGRELAGSR--VDGLVNCAGIYGPIGPLGELELNDFAETLRVNLLGTVQMCQTLLPLLRAATRGKIVNLSGGGAATPFPNYSAYACSKVAIVRFTENLSLEYPE--LDVNCVAPGFVLTRLHEATLQAGPGKASPQFYASTQQQIEKGGVPPEKAAHLISWLLSETSDGVTGKFLSAPWDPWEQSDFQAKLRQDKNFATLRRIDDKGFSS 831
            L++K +++TGGSLGIG A A  CA QGA V++V+R ++ L  +L ++ SIS   H  +S DV   + V      +      +DG+VNCAGIYGPIG    + + DF + + +NLLGTV MC  + PLL++ +  KIVN SGGGAA+PFPNYSAYA SK AIVRFTEN S+E  +   D+N VAPGFV+TRLH+ T+  G       FY +T++Q+++GG+PPEKAA L  +LLS++S+G+ GKF+SAPWDPW++  FQ KL+ D +FATLRRID+K F++
Sbjct:    4 LKSKKIIVTGGSLGIGFAVAKACAMQGAEVIIVARNQNDLNSSLKKICSISDKNHLAYSLDVSDLKAVNVFAEWIKDKNLDIDGIVNCAGIYGPIGKTTNVNMEDFTKAININLLGTVYMCSAIAPLLKSKSNKKIVNFSGGGAASPFPNYSAYASSKAAIVRFTENFSIELKDNKFDINSVAPGFVITRLHDQTISTGSSVVGSNFYDNTKKQMKEGGIPPEKAADLTVFLLSDSSNGINGKFISAPWDPWKEDFFQEKLKSDNDFATLRRIDEKFFTN 283          
BLAST of mRNA_P-wetherbeei_contig18092.1.1 vs. uniprot
Match: A0A1F9U1G0_9BACT (Uncharacterized protein n=1 Tax=Elusimicrobia bacterium RIFCSPLOWO2_01_FULL_54_10 TaxID=1797945 RepID=A0A1F9U1G0_9BACT)

HSP 1 Score: 290 bits (742), Expect = 5.720e-95
Identity = 155/279 (55.56%), Postives = 197/279 (70.61%), Query Frame = 1
Query:    4 LQNKTVLITGGSLGIGQATALECARQGARVVVVSRGKDALLGTLAQLESISAAGHAVHSFDVGKSEDV---LKLGRELAGSRVDGLVNCAGIYGPIGPLGELELNDFAETLRVNLLGTVQMCQTLLPLLRAATRGKIVNLSGGGAATPFPNYSAYACSKVAIVRFTENLSLEYPELDV--NCVAPGFVLTRLHEATLQAGPGKASPQFYASTQQQIEKGGVPPEKAAHLISWLLSETSDGVTGKFLSAPWDPWEQSDFQAKLRQDKNFATLRRIDDKGF 825
            L+ K ++ITGGS+GIG+  A  CAR GA V++ +R +  L   L +L++IS+A H     DVG+   V    K   E  G+ +DGLVN AGIYGPIGP+ ++ L+DF +TLR+N LGTV MC   +PLL+   +GKI+N SGGGA+ PF  YSAYA SK A+VR TENL+ E   L +  N V PGFV+TRLHE TL+AG  KA   F  ST+++IEKGGVPPEKAA L  +LLSE ++G+ GKFLSAPWD WE+ +F  KLR+DKNFATLRRIDD  F
Sbjct:    4 LKGKKIVITGGSIGIGKVVAEHCARAGAAVLITARTEKDLKAELEELKNISSADHQYRVLDVGERSQVEAFAKWTNEKWGA-IDGLVNNAGIYGPIGPIQDINLDDFEKTLRINFLGTVYMCHYFVPLLKER-KGKIINYSGGGASGPFARYSAYAASKTAVVRLTENLAEELAPLGIEANAVGPGFVVTRLHEQTLKAGD-KAGKGFLESTKKEIEKGGVPPEKAAKLTVFLLSEAANGINGKFLSAPWDAWEKPEFVEKLRKDKNFATLRRIDDMNF 279          
BLAST of mRNA_P-wetherbeei_contig18092.1.1 vs. uniprot
Match: A0A3D0MW76_9BACT (Dehydrogenase n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A3D0MW76_9BACT)

HSP 1 Score: 288 bits (737), Expect = 3.500e-94
Identity = 142/278 (51.08%), Postives = 194/278 (69.78%), Query Frame = 1
Query:    4 LQNKTVLITGGSLGIGQATALECARQGARVVVVSRGKDALLGTLAQLESISAAGHAVHSFDVGKSEDVLKLGRELAGSRVD--GLVNCAGIYGPIGPLGELELNDFAETLRVNLLGTVQMCQTLLPLLRAATRGKIVNLSGGGAATPFPNYSAYACSKVAIVRFTENLSLEYPE--LDVNCVAPGFVLTRLHEATLQAGPGKASPQFYASTQQQIEKGGVPPEKAAHLISWLLSETSDGVTGKFLSAPWDPWEQSDFQAKLRQDKNFATLRRIDDKGF 825
            L+NKT+++TGGSLGIG A A +C   GA+V++ SR K+ L     +L+S+       +S D+G    V +  +      ++  GLVN AGIYGPIG    +++++F +T+++N LGTV MC    P++++  R KIVN SGGGAATPF NYSAYA SK+AIVR TENL++E  +   D+NCVAPGFV+TRLH  TL   P      F+ +T++Q+E GGVPPEKAA L S+LLS+ SDG+TGKF+SAPWD W+ ++F+  L  DK+FATLRRID+K F
Sbjct:    4 LKNKTIIVTGGSLGIGFAIAKQCVLDGAKVIIASRNKNDLKTATDELDSLGKEKCISYSIDIGDLNAVREFAKWCIDQNLEISGLVNNAGIYGPIGKTTIVDMDEFTKTIQINFLGTVYMCNAFAPVMKSTGRKKIVNYSGGGAATPFANYSAYATSKIAIVRLTENLAIELADENFDINCVAPGFVVTRLHSQTLNQNPDLVGKGFFENTKKQVESGGVPPEKAAELTSFLLSDESDGITGKFISAPWDDWKSTEFKNTLLSDKDFATLRRIDNKNF 281          
BLAST of mRNA_P-wetherbeei_contig18092.1.1 vs. uniprot
Match: A0A1F9V5I4_9BACT (Uncharacterized protein n=2 Tax=unclassified Elusimicrobia TaxID=1797919 RepID=A0A1F9V5I4_9BACT)

HSP 1 Score: 275 bits (703), Expect = 5.660e-89
Identity = 153/281 (54.45%), Postives = 189/281 (67.26%), Query Frame = 1
Query:    1 MLQNKTVLITGGSLGIGQATALECARQGARVVVVSR-GKDALLGTLAQLESISAAGHAVHSFDVGKSEDVLKLGRELAGSRV---DGLVNCAGIYGPIGPLGELELNDFAETLRVNLLGTVQMCQTLLPLLRAATRGKIVNLSGGGAATPFPNYSAYACSKVAIVRFTENLSLEYPELD--VNCVAPGFVLTRLHEATLQAGPGKASPQFYASTQQQIEKGGVPPEKAAHLISWLLSETSDGVTGKFLSAPWDPWEQSDFQAKLRQDKNFATLRRIDDKGF 825
            ML+ KTV ITGGSLGIG A A  CAR GAR+V+ +R GKD L     +L+SI          DVG    V +   + AG R+   DGLVNCAG+YGPIG L  +++ +F   +RVN LGT   C    P ++  + G IVN SGGGA+ PFPNYSAYA  K AIVR TENL++E+ E+   VN VAPGFV   LH  TL+AG G+A  QF  +T++Q+E GGVPPEKAA L  +LLSE S G+TGKF+SAPWDPWE      KLR++K++ATLRRIDD GF
Sbjct:    6 MLKGKTVFITGGSLGIGYAVAEHCARAGARLVLAARTGKD-LAEAARKLKSIGPGEPLTRVLDVGDLGQV-RAAADWAGKRLGGLDGLVNCAGVYGPIGRLDLIDMEEFDRAIRVNFLGTAFACHAFAPWMKDKS-GAIVNFSGGGASAPFPNYSAYAAGKTAIVRLTENLAVEFAEIGIRVNVVAPGFVXXXLHRDTLKAG-GRAGAQFLENTKKQMESGGVPPEKAAKLTVFLLSEASAGITGKFISAPWDPWEDPACARKLRENKDYATLRRIDDMGF 282          
BLAST of mRNA_P-wetherbeei_contig18092.1.1 vs. uniprot
Match: A0A1A2P1F7_MYCSD (Dehydrogenase n=1 Tax=Mycolicibacter sinensis (strain JDM601) TaxID=875328 RepID=A0A1A2P1F7_MYCSD)

HSP 1 Score: 210 bits (535), Expect = 1.190e-63
Identity = 120/279 (43.01%), Postives = 167/279 (59.86%), Query Frame = 1
Query:    4 LQNKTVLITGGSLGIGQATALECARQGARVVVVSRGKDALLGTLAQLESISAAGHAVHSFDVGKSEDVLKLGREL--AGSRVDGLVNCAGIYGPIGPLGELELNDFAETLRVNLLGTVQMCQTLLPLLRAATRGKIVNLSGGGAATPFPNYSAYACSKVAIVRFTENLSLEYPE--LDVNCVAPGFVLTRLHEATLQAGPGKASPQFYASTQQQIEKGGVPPEKAAHLISWLLSETSDGVTGKFLSAPWDPWEQSDFQAKLRQDKNFATLRRI--DDKG 822
            L  +  ++TGGS G+G A A   A +GA V++  RG++AL    A L + +         DV + +D  +L      A  R+D LVN AG+YGP+G L +++  ++A  + +NLLGTV  C+  LP +++A RGKIVNLSGGGA  P P  SAYA SK A+VRFTE L+ E  +  +DVN VAPG + TRL E  L AG  K    +Y  + +Q E+GG   ++AA L  +L S  SDG+TGK +SA WDPW+     A +  + +  TLRRI   D+G
Sbjct:    3 LDGRAAVVTGGSQGLGLAVARAFAAEGADVLICGRGEEALENARASLSAGTGCRVLAAVADVSRPDDAERLVSAALNAFGRLDVLVNNAGVYGPMGLLEDVDWGEWARAVEINLLGTVLPCRAALPHMKSAGRGKIVNLSGGGATAPMPRISAYAASKAAVVRFTETLAEEVRQEGIDVNAVAPGALNTRLLEQVLSAGADKVGADYYRKSVKQKEEGGASMDRAAALCVFLASAASDGLTGKLISAVWDPWDTLPAHAAVLGESDIYTLRRIVPQDRG 281          
BLAST of mRNA_P-wetherbeei_contig18092.1.1 vs. uniprot
Match: A0A2V7C1E5_9BACT (Dehydrogenase n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V7C1E5_9BACT)

HSP 1 Score: 211 bits (536), Expect = 2.990e-63
Identity = 117/278 (42.09%), Postives = 172/278 (61.87%), Query Frame = 1
Query:   13 KTVLITGGSLGIGQATALECARQGARVVVVSRGKDALLGTLAQLESISAAGHAVHSFDVGKSEDVLKLGRELAG--SRVDGLVNCAGIYGPIGPLGELELNDFAETLRVNLLGTVQMCQTLLPLLRAATRGKIVNLSGGGAATPFPNYSAYACSKVAIVRFTENLSLEYPE--LDVNCVAPGFVLTRLHEATLQAGPGKASPQFYASTQQQIEKGGVPPEKAAHLISWLLSETSDGVTGKFLSAPWDPWEQSDFQAKLRQDKNFATLRRI--DDKGFS 828
            +  ++TGGS GIG+A        G +V   +R    L  T  +L SISA    V + DV +  D+ KL R      S++D LVN AG+YGPIGP  E++ +++ + L  NL+G   MC+ ++P+L    RGK++N+SGGGAATPF  Y+AYA SK A+VRFTE L+LE  +  + VN +APGFV T LH+ TL+AG  +A  +F   T++++E+GGV P   A L+++L S+ +D +TGKF+S+ WD W+  +         +  TLRRI   D+G +
Sbjct:   51 RVAIVTGGSRGIGKAVVRSLLESGTKVAFCARNAQDLRTTAEELASISADLLPVQA-DVTREGDIDKLVRTTLDRFSQIDILVNNAGVYGPIGPAWEVDPSEWRDALTTNLVGAFLMCRAIVPILIGQRRGKVINMSGGGAATPFARYTAYAVSKAALVRFTETLALEVADYNIQVNAIAPGFVATSLHQRTLEAGE-RAGAEFLRKTKEELERGGVDPAIPAALVAFLASDKADRITGKFISSVWDDWQNFEQHVDEIGKTDVYTLRRIVPRDRGMN 326          
BLAST of mRNA_P-wetherbeei_contig18092.1.1 vs. uniprot
Match: A0A0P1L7E5_9BACT (3-oxoacyl-[acyl-carrier protein] reductase n=1 Tax=Candidatus Kryptonium thompsoni TaxID=1633631 RepID=A0A0P1L7E5_9BACT)

HSP 1 Score: 208 bits (529), Expect = 8.480e-63
Identity = 119/279 (42.65%), Postives = 164/279 (58.78%), Query Frame = 1
Query:    4 LQNKTVLITGGSLGIGQATALECARQGARVVVVSRGKDALLGTLAQLESISAAGHAVHSF-DVGKSEDVLKLGRELAG--SRVDGLVNCAGIYGPIGPLGELELNDFAETLRVNLLGTVQMCQTLLPLLRAATRGKIVNLSGGGAATPFPNYSAYACSKVAIVRFTENLSLEYPE--LDVNCVAPGFVLTRLHEATLQAGPGKASPQFYASTQQQIEKGGVPPEKAAHLISWLLSETSDGVTGKFLSAPWDPWEQSDFQAKLRQDKNFATLRRIDDKGF 825
            L+NK+ ++TGGS GIG+  AL  AR+G +V +V+R  + +  T+  ++     G A+    DV    DV K+  E     S VD L+N AGI  PIG    +++ ++     VNL G    C+ +LPL+     GKI+NLSGGGA  P P +SAY+ SK AIVRFTE L+ E  +  + VN +APG + TR+ E  L+AG      +   +  + + KGG P E    L  +L SE SDG+TGK +SAPWDPW+   F  KL+ DK+ A LRRIDDK F
Sbjct:    3 LKNKSAIVTGGSRGIGRGIALRLAREGVKVAIVARTSEEVFATVEMIKK--NGGEAIGLIGDVSNWNDVQKIVEETVRKFSTVDILINNAGIQKPIGLFQNVDIKEWIRNFEVNLFGAAMFCKAVLPLMIEKRNGKIINLSGGGATYPRPYFSAYSVSKTAIVRFTEILAEEVKDYNIHVNAIAPGAINTRMLEEVLEAGELAGKKELEEAITRAV-KGGSPLEIVVELALFLASEESDGITGKLISAPWDPWKNEAFIEKLKVDKDIAVLRRIDDKTF 278          
BLAST of mRNA_P-wetherbeei_contig18092.1.1 vs. uniprot
Match: A0A6G6JXK8_9BACT (SDR family oxidoreductase n=1 Tax=Roseimicrobium sp. ORNL1 TaxID=2711231 RepID=A0A6G6JXK8_9BACT)

HSP 1 Score: 207 bits (528), Expect = 1.480e-62
Identity = 123/285 (43.16%), Postives = 161/285 (56.49%), Query Frame = 1
Query:    4 LQNKTVLITGGSLGIGQATALECARQGARVVVVSRGKDALLGTLAQLESISAAGHAVHSF--DVGKSEDVLKL----GRELAGSRVDGLVNCAGIYGPIGPLGELELNDFAETLRVNLLGTVQMCQTLLPLLRAATRGKIVNLSGGGAATPFPNYSAYACSKVAIVRFTENLSLEYP--ELDVNCVAPGFVLTRLHEATLQAGPGKASPQFYASTQQQIEKGGVPPEKAAHLISWLLSETSDGVTGKFLSAPWDPWEQSDFQAKLRQDKNFATLRRI--DDKGFS 828
            L  +  +ITGG+ G+GQA   E   +GA V++ SR         A+L      G  V     DV   E+V  L     +E     +  LVN AGIYGP GP  E++  ++   + +NL GT+  C+ ++PL RA+ RGKIVNLSGGGA  P P +SAYA SK A+VR TE L++E     +DVN VAPG + TRL +  L+AGP      F+   QQQ +KGGVP EK A L  +L S  SDGVTGK +SA WDPW+    +       +  TLRRI   D+G S
Sbjct:    3 LHQQNAVITGGTQGLGQAIVREFLAEGANVLLCSRNGAEAASLAAELSKDLPPGQKVVGVAADVSSEEEVKHLFDTATKEFGELHI--LVNNAGIYGPKGPSEEVDWEEWKRAMEINLYGTMLPCRAVIPLFRASGRGKIVNLSGGGATNPLPRFSAYAASKAAVVRLTETLAVELAPDHIDVNAVAPGALNTRLLDEVLEAGPEVVGASFFEKAQQQAQKGGVPLEKGARLCVYLASRDSDGVTGKLISAQWDPWDTLHDRLGEISGNDIYTLRRIVPADRGLS 285          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18092.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3R7DAZ1_9BACT1.960e-10355.56SDR family oxidoreductase n=1 Tax=Candidatus Parcu... [more]
A0A6L4Y7S9_9BACT4.260e-10054.80Dehydrogenases with different specificities (Relat... [more]
A0A1Z9NIT1_9BACT1.620e-9751.43Uncharacterized protein n=1 Tax=bacterium TMED217 ... [more]
A0A1F9U1G0_9BACT5.720e-9555.56Uncharacterized protein n=1 Tax=Elusimicrobia bact... [more]
A0A3D0MW76_9BACT3.500e-9451.08Dehydrogenase n=1 Tax=Bacteroidetes bacterium TaxI... [more]
A0A1F9V5I4_9BACT5.660e-8954.45Uncharacterized protein n=2 Tax=unclassified Elusi... [more]
A0A1A2P1F7_MYCSD1.190e-6343.01Dehydrogenase n=1 Tax=Mycolicibacter sinensis (str... [more]
A0A2V7C1E5_9BACT2.990e-6342.09Dehydrogenase n=1 Tax=Candidatus Rokubacteria bact... [more]
A0A0P1L7E5_9BACT8.480e-6342.653-oxoacyl-[acyl-carrier protein] reductase n=1 Tax... [more]
A0A6G6JXK8_9BACT1.480e-6243.16SDR family oxidoreductase n=1 Tax=Roseimicrobium s... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18092contigP-wetherbeei_contig18092:528..1367 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog671143.DAMO_0934
Preferred nameymfI
PFAMsadh_short,adh_short_C2
Model size840
Max annot lvl2|Bacteria
KEGG rclassRC00029,RC00117,RC00534
KEGG koko:K00059,ko:K00216,ko:K07124
KEGG ReactionR01505,R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671
KEGG Pathwayko00061,ko00333,ko00780,ko01040,ko01053,ko01100,ko01110,ko01130,ko01212,map00061,map00333,map00780,map01040,map01053,map01100,map01110,map01130,map01212
KEGG ModuleM00083,M00572
Hectar predicted targeting categoryother localisation
Exons1
Evalue5.53e-54
EggNOG OGsCOG0300@1|root,COG0300@2|Bacteria
EC1.1.1.100,1.3.1.28
DescriptionBelongs to the short-chain dehydrogenases reductases (SDR) family
Cds size840
COG categoryS
BRITEko00000,ko00001,ko00002,ko01000,ko01004
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186136.0588536-CDS-P-wetherbeei_contig18092:527..13671683186136.0588536-CDS-P-wetherbeei_contig18092:527..1367Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig18092 528..1367 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18092.1.1prot_P-wetherbeei_contig18092.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig18092 528..1367 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig18092.1.1

>prot_P-wetherbeei_contig18092.1.1 ID=prot_P-wetherbeei_contig18092.1.1|Name=mRNA_P-wetherbeei_contig18092.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=280bp
MLQNKTVLITGGSLGIGQATALECARQGARVVVVSRGKDALLGTLAQLES
ISAAGHAVHSFDVGKSEDVLKLGRELAGSRVDGLVNCAGIYGPIGPLGEL
ELNDFAETLRVNLLGTVQMCQTLLPLLRAATRGKIVNLSGGGAATPFPNY
SAYACSKVAIVRFTENLSLEYPELDVNCVAPGFVLTRLHEATLQAGPGKA
SPQFYASTQQQIEKGGVPPEKAAHLISWLLSETSDGVTGKFLSAPWDPWE
QSDFQAKLRQDKNFATLRRIDDKGFSSIG*
back to top

mRNA from alignment at P-wetherbeei_contig18092:528..1367-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig18092.1.1 ID=mRNA_P-wetherbeei_contig18092.1.1|Name=mRNA_P-wetherbeei_contig18092.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=840bp|location=Sequence derived from alignment at P-wetherbeei_contig18092:528..1367- (Phaeothamnion wetherbeei SAG_119_79)
ATGCTGCAAAATAAGACGGTCCTCATCACCGGAGGAAGTCTGGGCATAGG TCAGGCGACCGCGCTCGAATGTGCTCGCCAGGGAGCCCGCGTCGTTGTCG TGTCTCGGGGGAAAGATGCGCTCCTGGGGACGCTGGCGCAGCTTGAGTCG ATCTCGGCGGCAGGCCACGCGGTCCACAGCTTCGATGTCGGCAAGAGCGA GGATGTGCTCAAGCTCGGCCGGGAGTTGGCTGGGAGCCGAGTGGACGGTC TCGTCAATTGCGCTGGCATCTACGGGCCTATCGGGCCTCTCGGTGAGCTT GAATTGAATGATTTCGCGGAGACCCTGCGAGTCAATCTGCTGGGCACCGT GCAAATGTGCCAGACTCTGCTCCCACTTTTGCGCGCGGCGACTCGAGGAA AGATCGTCAATCTGTCGGGAGGCGGGGCGGCCACCCCTTTCCCCAACTAC TCGGCTTACGCGTGCAGCAAAGTCGCCATCGTGCGTTTTACCGAGAATCT TTCTTTGGAATATCCCGAGCTCGACGTAAACTGCGTCGCTCCTGGTTTTG TGCTGACGCGCCTTCATGAAGCGACGCTGCAAGCAGGTCCAGGAAAAGCG AGCCCGCAATTTTACGCTTCGACTCAGCAGCAGATAGAGAAGGGCGGGGT GCCGCCAGAGAAGGCTGCCCACCTGATCAGCTGGCTCCTTAGTGAGACAT CAGACGGTGTCACGGGCAAGTTCCTTTCGGCCCCCTGGGACCCTTGGGAA CAGTCCGATTTTCAAGCAAAATTGCGCCAGGACAAGAACTTTGCCACGCT CCGTCGCATCGACGACAAGGGCTTTAGCAGCATCGGTTAG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig18092:528..1367-

>mRNA_P-wetherbeei_contig18092.1.1 ID=mRNA_P-wetherbeei_contig18092.1.1|Name=mRNA_P-wetherbeei_contig18092.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=840bp|location=Sequence derived from alignment at P-wetherbeei_contig18092:528..1367- (Phaeothamnion wetherbeei SAG_119_79)
ATGCTGCAAAATAAGACGGTCCTCATCACCGGAGGAAGTCTGGGCATAGG
TCAGGCGACCGCGCTCGAATGTGCTCGCCAGGGAGCCCGCGTCGTTGTCG
TGTCTCGGGGGAAAGATGCGCTCCTGGGGACGCTGGCGCAGCTTGAGTCG
ATCTCGGCGGCAGGCCACGCGGTCCACAGCTTCGATGTCGGCAAGAGCGA
GGATGTGCTCAAGCTCGGCCGGGAGTTGGCTGGGAGCCGAGTGGACGGTC
TCGTCAATTGCGCTGGCATCTACGGGCCTATCGGGCCTCTCGGTGAGCTT
GAATTGAATGATTTCGCGGAGACCCTGCGAGTCAATCTGCTGGGCACCGT
GCAAATGTGCCAGACTCTGCTCCCACTTTTGCGCGCGGCGACTCGAGGAA
AGATCGTCAATCTGTCGGGAGGCGGGGCGGCCACCCCTTTCCCCAACTAC
TCGGCTTACGCGTGCAGCAAAGTCGCCATCGTGCGTTTTACCGAGAATCT
TTCTTTGGAATATCCCGAGCTCGACGTAAACTGCGTCGCTCCTGGTTTTG
TGCTGACGCGCCTTCATGAAGCGACGCTGCAAGCAGGTCCAGGAAAAGCG
AGCCCGCAATTTTACGCTTCGACTCAGCAGCAGATAGAGAAGGGCGGGGT
GCCGCCAGAGAAGGCTGCCCACCTGATCAGCTGGCTCCTTAGTGAGACAT
CAGACGGTGTCACGGGCAAGTTCCTTTCGGCCCCCTGGGACCCTTGGGAA
CAGTCCGATTTTCAAGCAAAATTGCGCCAGGACAAGAACTTTGCCACGCT
CCGTCGCATCGACGACAAGGGCTTTAGCAGCATCGGTTAG
back to top