mRNA_P-wetherbeei_contig18077.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig18077.1.1 vs. uniprot
Match: A0A3N7CA21_9BURK (TonB-dependent siderophore receptor n=4 Tax=unclassified Variovorax TaxID=663243 RepID=A0A3N7CA21_9BURK) HSP 1 Score: 171 bits (434), Expect = 5.960e-45 Identity = 97/261 (37.16%), Postives = 148/261 (56.70%), Query Frame = 1
Query: 7 DTLSIGERWQVLAGARH----ADVADFYGGKAKKTS----PSGAVIFKGAENSRLYGSYARSLQQGYRGPCQDRPDVTNACDIAPPIEAKQYEVGAKMRVGGSLDLTVAAFRIELPFDYVDEAQLLYGRFGNQVNQGVEFSAAGNILPNLAVVAGLGYLDAELARNEDATLDGNRIPGIPQWNANVFANYGVHGVPGLSLTAGAYWGGSRMLDVRNAIPVDGYTRIDIGAQYRMPMVLKGLTLRANVNNVTDKFYWEGLNF 765
DTLS +WQ+L GARH +D+ Y G K T+ P+ + ++K +E + +Y +Y +QG P NA PI+++QYE+G K RV L +T AAF ++ P V + ++ + G Q ++GVEF+A G I P L+ +AG+ +LDAE DATL+G R + ++ ANVF +Y + VPGLS G Y G+R LD N + V G+TR D+GA Y ++ K +R ++ NV ++ YW +N+
Sbjct: 540 DTLSFTPQWQLLVGARHISYASDIGSKYDGTPKYTTRVTVPTLSAMYKPSERTTVYATYGEGFEQGAYAPSY----AENALQKLGPIKSRQYEIGVKSRVLDGLMVTAAAFDMDKPLQAVTPSDNIFRQQGRQRHRGVEFTANGEITPQLSGIAGVSWLDAEQRDTGDATLEGRRPSNVARFQANVFLDYRLTSVPGLSFNTGIYHVGNRPLDRANTMIVPGFTRWDLGAAYVTKLMGKSSVIRLSIENVANRRYWSSVNY 796
BLAST of mRNA_P-wetherbeei_contig18077.1.1 vs. uniprot
Match: A0A2E9BIF6_9BURK (TonB-dependent siderophore receptor n=3 Tax=unclassified Variovorax TaxID=663243 RepID=A0A2E9BIF6_9BURK) HSP 1 Score: 171 bits (433), Expect = 8.100e-45 Identity = 98/277 (35.38%), Postives = 153/277 (55.23%), Query Frame = 1
Query: 1 AADTLSIGERWQVLAGARH----ADVADFYGGKAKKTS----PSGAVIFKGAENSRLYGSYARSLQQGYRGPCQDRPDVTNACDIAPPIEAKQYEVGAKMRVGGSLDLTVAAFRIELPFDYVDEAQLLYGRFGNQVNQGVEFSAAGNILPNLAVVAGLGYLDAELARNEDATLDGNRIPGIPQWNANVFANYGVHGVPGLSLTAGAYWGGSRMLDVRNAIPVDGYTRIDIGAQYRMPMVLKGLTLRANVNNVTDKFYWEGLNFESYSAALGRTYSIT 807
A+DT+S G WQ+L GARH +D+ Y G K T+ P+ + ++K +E + Y +Y +QG P NA PI+++QYE+G K R+ L +T AAF ++ P V A ++ + G Q ++GVEF+A G I P L+ +AG+ +LDA+ D L+G R + ++ AN+F +Y + VPGLSL G Y G+R LD NA+ V +TR D+GA Y ++ LR ++ NVT++ YW +N+ + RT ++
Sbjct: 536 ASDTISFGPNWQLLIGARHIDYGSDIGSKYDGTPKYTTSVTVPTVSAMYKPSERTTFYATYGEGFEQGAYAPSY----ADNALQKLGPIKSRQYEIGVKSRMRDGLMVTAAAFDMDKPLQAVSPADNIFRQQGRQRHRGVEFTANGEITPQLSGIAGVSWLDAQQRETGDPALEGRRPSNVARFQANLFLDYRLMAVPGLSLNTGIYHVGNRPLDRANALIVPSFTRWDLGAAYVTRLMGAPSILRLSIENVTNRRYWSSVNYGGVTQGNPRTVRLS 808
BLAST of mRNA_P-wetherbeei_contig18077.1.1 vs. uniprot
Match: A0A1H7EQK3_9BURK (Iron complex outermembrane recepter protein n=2 Tax=unclassified Variovorax TaxID=663243 RepID=A0A1H7EQK3_9BURK) HSP 1 Score: 170 bits (430), Expect = 2.450e-44 Identity = 98/261 (37.55%), Postives = 146/261 (55.94%), Query Frame = 1
Query: 7 DTLSIGERWQVLAGARH----ADVADFYGGKAKK----TSPSGAVIFKGAENSRLYGSYARSLQQGYRGPCQDRPDVTNACDIAPPIEAKQYEVGAKMRVGGSLDLTVAAFRIELPFDYVDEAQLLYGRFGNQVNQGVEFSAAGNILPNLAVVAGLGYLDAELARNEDATLDGNRIPGIPQWNANVFANYGVHGVPGLSLTAGAYWGGSRMLDVRNAIPVDGYTRIDIGAQYRMPMVLKGLTLRANVNNVTDKFYWEGLNF 765
DT+S +WQ+L GARH +D+ Y G K T P+ +V++K +E + +Y +Y +QG P NA PI+++QYE+G K RV L LT AAF ++ P V A ++ + G Q ++GVEF+A G I P L+ +AG+ +LDAE DA L+G R + ++ ANVF +Y + VPGLS G Y G+R LD N + V +TR D+GA Y + K +R ++ NVT++ YW +N+
Sbjct: 577 DTISFTPQWQLLLGARHIAYGSDIGSKYDGTPKYSTRVTVPTLSVMYKPSERTTVYATYGEGFEQGAYAPSY----ADNALQKLGPIKSRQYEIGVKSRVLDGLMLTAAAFDMDKPLQAVSPADNIFRQQGRQRHRGVEFTANGEITPQLSGIAGVSWLDAEQRDTGDAALEGRRPSNVARFQANVFLDYRLASVPGLSFNTGVYHVGNRPLDRANTMIVPSFTRWDLGAAYVTRWMGKSSVIRLSIENVTNRRYWSSVNY 833
BLAST of mRNA_P-wetherbeei_contig18077.1.1 vs. uniprot
Match: A0A3R9ZUH5_9BURK (TonB-dependent receptor n=3 Tax=Bacteria TaxID=2 RepID=A0A3R9ZUH5_9BURK) HSP 1 Score: 169 bits (429), Expect = 3.680e-44 Identity = 95/261 (36.40%), Postives = 148/261 (56.70%), Query Frame = 1
Query: 7 DTLSIGERWQVLAGARH----ADVADFYGGKAKKTS----PSGAVIFKGAENSRLYGSYARSLQQGYRGPCQDRPDVTNACDIAPPIEAKQYEVGAKMRVGGSLDLTVAAFRIELPFDYVDEAQLLYGRFGNQVNQGVEFSAAGNILPNLAVVAGLGYLDAELARNEDATLDGNRIPGIPQWNANVFANYGVHGVPGLSLTAGAYWGGSRMLDVRNAIPVDGYTRIDIGAQYRMPMVLKGLTLRANVNNVTDKFYWEGLNF 765
DT+S +WQ+L GARH +D+ Y G K T+ P+ +V++K E + +Y +Y +QG P NA PI+++QYE+G K RV L +T AAF ++ P V + ++ + G+Q ++G+E +A G I P L+ +AG+ +LDAE DA L+G R + ++ ANVF +Y + VPGLS G Y G+R LD N + V G+TR D+GA Y ++ K +R ++ NVT++ YW +N+
Sbjct: 608 DTISFTPQWQLLLGARHISYSSDIGSKYDGTPKYTTRVTVPTLSVMYKPTERTTVYATYGEGFEQGAYAPSY----AENALQKLGPIKSRQYEIGVKSRVLDGLMVTAAAFDMDKPLQAVTPSDNIFRQKGSQRHRGIELTANGEITPQLSGIAGVSWLDAEQRDTGDAALEGRRPSNVARFQANVFLDYRLASVPGLSFNTGVYHVGNRPLDRANTMIVPGFTRWDLGAAYVTKLMGKSSVIRLSIENVTNRRYWSSVNY 864
BLAST of mRNA_P-wetherbeei_contig18077.1.1 vs. uniprot
Match: UPI001C81599C (TonB-dependent siderophore receptor n=1 Tax=Noviherbaspirillum aridicola TaxID=2849687 RepID=UPI001C81599C) HSP 1 Score: 168 bits (425), Expect = 5.220e-44 Identity = 96/281 (34.16%), Postives = 151/281 (53.74%), Query Frame = 1
Query: 7 DTLSIGERWQVLAGARH----------ADVADFYGGKAKKTSPSGAVIFKGAENSRLYGSYARSLQQGYRGPCQDRPDVTNACDIAPPIEAKQYEVGAKMRVGGSLDLTVAAFRIELPFDYVDEAQLLYGRFGNQVNQGVEFSAAGNILPNLAVVAGLGYLDAELARNEDATLDGNRIPGIPQWNANVFANYGVHGVPGLSLTAGAYWGGSRMLDVRNAIPVDGYTRIDIGAQYRMPMVLKGLTLRANVNNVTDKFYWEGLNFESYSAALGRTYSITAELK 819
D LS GERWQ + GARH + Y + T PSG +IF+ Y SY+ L+QG P NA ++ P++++Q E G K + L A + IE ++ + Y + G Q ++G+E + +G + +LA+VAGLG++D E N+D G R P +P+ A++F +Y V G+ GL + GAY+ G+R LD N + + YTR D+GA+Y + + T+RA+V+N+TDK YW +F S RT S++A+++
Sbjct: 431 DLLSFGERWQAIVGARHIRYHNEFTRPGTPTEHY--RKNSTVPSGGLIFRPTRRVMTYASYSEGLEQGGIAPFNS----ANAGEVMNPVKSEQLEAGIKAELLDELSFGAAVYEIEKGLQAINSDNV-YVQDGRQRHRGLELTVSGQLTRDLALVAGLGFIDTEQVGNDDVRTRGKRTPNVPRRQASIFIDYRVPGIAGLHVNGGAYYVGARPLDGSNTVELPAYTRFDLGARYVTTIGGRKTTVRAHVDNLTDKRYWAAASFGSVYPGKPRTVSVSAQVE 704
BLAST of mRNA_P-wetherbeei_contig18077.1.1 vs. uniprot
Match: A0A1E4IV27_9BURK (STN domain-containing protein n=2 Tax=Variovorax TaxID=34072 RepID=A0A1E4IV27_9BURK) HSP 1 Score: 161 bits (408), Expect = 1.990e-41 Identity = 91/261 (34.87%), Postives = 141/261 (54.02%), Query Frame = 1
Query: 7 DTLSIGERWQVLAGARHADVADFYGGK--------AKKTSPSGAVIFKGAENSRLYGSYARSLQQGYRGPCQDRPDVTNACDIAPPIEAKQYEVGAKMRVGGSLDLTVAAFRIELPFDYVDEAQLLYGRFGNQVNQGVEFSAAGNILPNLAVVAGLGYLDAELARNEDATLDGNRIPGIPQWNANVFANYGVHGVPGLSLTAGAYWGGSRMLDVRNAIPVDGYTRIDIGAQYRMPMVLKGLTLRANVNNVTDKFYWEGLNF 765
DTLS +WQ+L GAR+ D + G K + T P+ ++++K +E + +Y +Y +QG GP NA PI+++QYE+G K RV L LT A F ++ P V + ++ + G Q ++GVEF+A G I P L+ +AG+ +LDAE DA L+G R + ++ ANVF +Y + VPGLS G Y G+R LD N + V +TR D+G Y + +R ++ N ++ YW +N+
Sbjct: 521 DTLSFTPQWQLLLGARYIDYSSDIGSKYDGTPRYSTRVTVPTLSLMYKPSERTTVYATYGEGFEQGAYGPSY----ADNALQKLGPIKSRQYEIGVKSRVRDGLMLTAAVFDMDKPLQAVTPSDNIFRQQGRQRHRGVEFTANGEITPQLSGIAGVAWLDAEQRDTGDAALEGRRPSNVARFQANVFLDYRLSSVPGLSFNTGIYHVGNRPLDRANTMIVPAFTRWDLGTAYATRLAGVPSVIRLSIENAANRRYWSSVNY 777
BLAST of mRNA_P-wetherbeei_contig18077.1.1 vs. uniprot
Match: A0A3M3WM16_PSEAP (TonB-dependent siderophore receptor n=3 Tax=Pseudomonas syringae group TaxID=136849 RepID=A0A3M3WM16_PSEAP) HSP 1 Score: 148 bits (374), Expect = 4.160e-40 Identity = 81/220 (36.82%), Postives = 121/220 (55.00%), Query Frame = 1
Query: 91 KKTSPSGAVIFKGAENSRLYGSYARSLQQGYRGPCQDRPDVTNACDIAPPIEAKQYEVGAKMRVGGSLDLTVAAFRIELPFDYVDEAQLLYGRFGNQVNQGVEFSAAGNILPNLAVVAGLGYLDAELARNEDATLDGNRIPGIPQWNANVFANYGVHGVPGLSLTAGAYWGGSRMLDVRNAIPVDGYTRIDIGAQYRMPMVLKGLTLRANVNNVTDKFYW 750
+K SPSG +++K ++ +Y +Y L QG P N I PP ++Q EVGAK +G S T + FRI+ P + ++G G + N GVE + G + ++ G+ Y+D+EL + T DGNR P P++N N+ A + V GV GL+LT + GS+ LD N+ +D R D+GA+Y + K +TLRANV NV +K+YW
Sbjct: 10 EKVSPSGGILYKVTDDFSVYANYMEGLSQGKIAPSTS----VNEDQIFPPFVSRQVEVGAKYDLG-SFAFTASVFRIKQPAYDTNTTSRVFGPNGKRRNDGVELTMFGEPMKGFRLLGGVMYIDSELTNTVNGTFDGNRAPATPKYNVNLGAEWDVPGVNGLTLTGRGIYTGSQYLDQANSKSIDSSERFDVGARYAFKVDQKDITLRANVENVMNKYYW 224
BLAST of mRNA_P-wetherbeei_contig18077.1.1 vs. uniprot
Match: A0A522RBN2_9GAMM (TonB-dependent receptor (Fragment) n=1 Tax=Rhodanobacteraceae bacterium TaxID=2052182 RepID=A0A522RBN2_9GAMM) HSP 1 Score: 149 bits (375), Expect = 1.100e-39 Identity = 95/283 (33.57%), Postives = 137/283 (48.41%), Query Frame = 1
Query: 7 DTLSIGERWQVLAGARH-----------ADVADFYGGKAKKTSPSGAVIFKGAENSRLYGSYARSLQQGYRGPCQDRPDVTNACDIAPPIEAKQYEVGAKMRVGGSLDLTVAAFRIELPFDYVDEAQLLYGRFGNQVNQGVEFSAAGNILPNLAVVAGLGYLDAELARNEDATLDGNRIPGIPQWNANVFANYGVHGVPGLSLTAGAYWGGSRMLDVRNAIPVDGYTRIDIGAQYRMPMVLKGLTLRANVNNVTDKFYWEGLNFESYSAALGRTYSITAELKL 822
DT+S+G+ WQVLAGAR+ DF + T P+ ++FK AE YG+Y +QG P N PI+++QYE+G K + SL T A F I+ P VD A ++ + G Q ++G+E +A G I P L+ + G +LDA +A L+G R ++ AN F +Y + GLSL+AG + G R LD N + VD Y R D GA Y V + R NVTD YW+ + RT ++ ++L
Sbjct: 17 DTVSLGDHWQVLAGARYLRYQSEAVAASGSRRDF---RVNSTIPTTGLLFKPAEAITFYGTYTEGFEQGAYAPVW----AANGGQRLDPIKSRQYEIGMKWQALPSLLATAAWFDIDKPLQEVDPADNVFKQHGRQRHRGLELTANGAITPRLSAIVGASWLDARQEDTGNAALEGKRPSNTARFQANAFIDYRPASIEGLSLSAGYFHVGDRFLDRANTVRVDAYGRWDAGAAYATRFVGRPSVFRLYAENVTDSRYWQSAIYGGVLQGNPRTVHLSMTVEL 292
BLAST of mRNA_P-wetherbeei_contig18077.1.1 vs. uniprot
Match: UPI001C80B46F (TonB-dependent siderophore receptor n=1 Tax=Pseudomonas sp. NCCP-436 TaxID=2842481 RepID=UPI001C80B46F) HSP 1 Score: 155 bits (392), Expect = 2.460e-39 Identity = 98/284 (34.51%), Postives = 151/284 (53.17%), Query Frame = 1
Query: 7 DTLSIGE---RWQVLAGARHADVADFYGGKAK-------KTSPSGAVIFKGAENSRLYGSYARSLQQGYRGPCQDRPDVTNACDIAPPIEAKQYEVGAKMRVGGSLDLTVAAFRIELPFDYVDEAQLLYGRFGNQVNQGVEFSAAGNILPNLAVVAGLGYLDAELARNEDATLDGNRIPGIPQWNANVFANYGVHGVPGLSLTAGAYWGGSRMLDVRNAIPVDGYTRIDIGAQYRMPMVLKGLTLRANVNNVTDKFYWEGLNF--ESYSAALG--RTYSITAEL 816
DTLS + +W V A ++ + A+ G + K + SP+ A++FK + LYG+Y L QG P NA ++ P KQYEVGAK +G +VA F+IE P YVD +YG +G Q N+G+E+S G P L ++ G+ Y A++ + + ++GN+I GIP+ A + A Y + VPGL+LTA A + G R + + + +T D+GA+Y + + +TLRA + N T+K YW G + S LG RT ++A +
Sbjct: 464 DTLSFWDDRIQWTVGARRQNVESANLTGARVKTSKYDEHRLSPATALLFKVTDELSLYGNYIEGLSQGGTAPLT----ANNAGEVVSPYVTKQYEVGAKWDLG-QFATSVALFQIEKPSAYVDPVSNVYGTYGEQRNRGIEWSFFGETSPELRLMGGVSYTKAQMTKALNRNIEGNQISGIPRLIAKLGAEYDLQAVPGLTLTAAASYTGERYVTEDQRLQLPSHTLYDLGARYSTEVAARPVTLRATLQNATNKAYWLGSTQGGDGLSGGLGAPRTLQLSATI 742
BLAST of mRNA_P-wetherbeei_contig18077.1.1 vs. uniprot
Match: A0A426V8S3_9BURK (TonB-dependent siderophore receptor n=1 Tax=Aquabacterium soli TaxID=2493092 RepID=A0A426V8S3_9BURK) HSP 1 Score: 155 bits (391), Expect = 3.120e-39 Identity = 97/286 (33.92%), Postives = 152/286 (53.15%), Query Frame = 1
Query: 13 LSIGERWQVLAGARHADVADFYGGKAK------KTSPSGAVIFKGAENSRLYGSYARSLQQG------YRGPCQDRPDVTNACDIAPPIEAKQYEVGAKMRVGGSLDLTVAAFRIELPFDYVDEA----QLLYGRFGNQVNQGVEFSAAGNILPNLAVVAGLGYLDAELARNEDA-TLDGNRIPGIPQWNANVFANYGVHGVPGLSLTAGAYWGGSRMLDVRNAIPVDGYTRIDIGAQYRMPMVLKGLTLRANVNNVTDKFYWEGLNFESYSAALGRTYSITAELK 819
+ G+RW L G + + D G + +PS +++FK N +YGSY S+++G Y G VTN +I PP+E++Q E+G K VGG+L LT A F+I+ Y + A + + G QV+ GVE ++ G +LP L VV G+ ++AE+ RN L+G + + A V+A Y + V GL+LT G Y+ G + +D N + +T DIGA+Y+ ++ LTLR N+NNVT+K YW N S R+ +I+ +++
Sbjct: 452 IEFGDRWSALLGLTQSTIYDKAFGATTSVYDETRVTPSASLLFKPVPNVTVYGSYIESMEKGGTAAKTYSG-----QPVTNPDEIKPPLESQQIELGVKATVGGAL-LTAAVFQIDKGLQYYERAGNTGPYTFVQDGRQVHTGVELTSTGRVLPGLTVVGGVTIMNAEVTRNRQTPALEGKTPANVAEKFAKVYAEYDLPAVAGLTLTGGLYYTGKQSVDPLNTDGIPDFTTADIGARYKTKLINLPLTLRLNINNVTNKSYWLTAN----STGAPRSLAISGQIE 727 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18077.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig18077.1.1 >prot_P-wetherbeei_contig18077.1.1 ID=prot_P-wetherbeei_contig18077.1.1|Name=mRNA_P-wetherbeei_contig18077.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=276bp AADTLSIGERWQVLAGARHADVADFYGGKAKKTSPSGAVIFKGAENSRLYback to top mRNA from alignment at P-wetherbeei_contig18077:2..829+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig18077.1.1 ID=mRNA_P-wetherbeei_contig18077.1.1|Name=mRNA_P-wetherbeei_contig18077.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=828bp|location=Sequence derived from alignment at P-wetherbeei_contig18077:2..829+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig18077:2..829+ >mRNA_P-wetherbeei_contig18077.1.1 ID=mRNA_P-wetherbeei_contig18077.1.1|Name=mRNA_P-wetherbeei_contig18077.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=828bp|location=Sequence derived from alignment at P-wetherbeei_contig18077:2..829+ (Phaeothamnion wetherbeei SAG_119_79)back to top |