mRNA_P-wetherbeei_contig18077.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig18077.1.1
Unique NamemRNA_P-wetherbeei_contig18077.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig18077.1.1 vs. uniprot
Match: A0A3N7CA21_9BURK (TonB-dependent siderophore receptor n=4 Tax=unclassified Variovorax TaxID=663243 RepID=A0A3N7CA21_9BURK)

HSP 1 Score: 171 bits (434), Expect = 5.960e-45
Identity = 97/261 (37.16%), Postives = 148/261 (56.70%), Query Frame = 1
Query:    7 DTLSIGERWQVLAGARH----ADVADFYGGKAKKTS----PSGAVIFKGAENSRLYGSYARSLQQGYRGPCQDRPDVTNACDIAPPIEAKQYEVGAKMRVGGSLDLTVAAFRIELPFDYVDEAQLLYGRFGNQVNQGVEFSAAGNILPNLAVVAGLGYLDAELARNEDATLDGNRIPGIPQWNANVFANYGVHGVPGLSLTAGAYWGGSRMLDVRNAIPVDGYTRIDIGAQYRMPMVLKGLTLRANVNNVTDKFYWEGLNF 765
            DTLS   +WQ+L GARH    +D+   Y G  K T+    P+ + ++K +E + +Y +Y    +QG   P        NA     PI+++QYE+G K RV   L +T AAF ++ P   V  +  ++ + G Q ++GVEF+A G I P L+ +AG+ +LDAE     DATL+G R   + ++ ANVF +Y +  VPGLS   G Y  G+R LD  N + V G+TR D+GA Y   ++ K   +R ++ NV ++ YW  +N+
Sbjct:  540 DTLSFTPQWQLLVGARHISYASDIGSKYDGTPKYTTRVTVPTLSAMYKPSERTTVYATYGEGFEQGAYAPSY----AENALQKLGPIKSRQYEIGVKSRVLDGLMVTAAAFDMDKPLQAVTPSDNIFRQQGRQRHRGVEFTANGEITPQLSGIAGVSWLDAEQRDTGDATLEGRRPSNVARFQANVFLDYRLTSVPGLSFNTGIYHVGNRPLDRANTMIVPGFTRWDLGAAYVTKLMGKSSVIRLSIENVANRRYWSSVNY 796          
BLAST of mRNA_P-wetherbeei_contig18077.1.1 vs. uniprot
Match: A0A2E9BIF6_9BURK (TonB-dependent siderophore receptor n=3 Tax=unclassified Variovorax TaxID=663243 RepID=A0A2E9BIF6_9BURK)

HSP 1 Score: 171 bits (433), Expect = 8.100e-45
Identity = 98/277 (35.38%), Postives = 153/277 (55.23%), Query Frame = 1
Query:    1 AADTLSIGERWQVLAGARH----ADVADFYGGKAKKTS----PSGAVIFKGAENSRLYGSYARSLQQGYRGPCQDRPDVTNACDIAPPIEAKQYEVGAKMRVGGSLDLTVAAFRIELPFDYVDEAQLLYGRFGNQVNQGVEFSAAGNILPNLAVVAGLGYLDAELARNEDATLDGNRIPGIPQWNANVFANYGVHGVPGLSLTAGAYWGGSRMLDVRNAIPVDGYTRIDIGAQYRMPMVLKGLTLRANVNNVTDKFYWEGLNFESYSAALGRTYSIT 807
            A+DT+S G  WQ+L GARH    +D+   Y G  K T+    P+ + ++K +E +  Y +Y    +QG   P        NA     PI+++QYE+G K R+   L +T AAF ++ P   V  A  ++ + G Q ++GVEF+A G I P L+ +AG+ +LDA+     D  L+G R   + ++ AN+F +Y +  VPGLSL  G Y  G+R LD  NA+ V  +TR D+GA Y   ++     LR ++ NVT++ YW  +N+   +    RT  ++
Sbjct:  536 ASDTISFGPNWQLLIGARHIDYGSDIGSKYDGTPKYTTSVTVPTVSAMYKPSERTTFYATYGEGFEQGAYAPSY----ADNALQKLGPIKSRQYEIGVKSRMRDGLMVTAAAFDMDKPLQAVSPADNIFRQQGRQRHRGVEFTANGEITPQLSGIAGVSWLDAQQRETGDPALEGRRPSNVARFQANLFLDYRLMAVPGLSLNTGIYHVGNRPLDRANALIVPSFTRWDLGAAYVTRLMGAPSILRLSIENVTNRRYWSSVNYGGVTQGNPRTVRLS 808          
BLAST of mRNA_P-wetherbeei_contig18077.1.1 vs. uniprot
Match: A0A1H7EQK3_9BURK (Iron complex outermembrane recepter protein n=2 Tax=unclassified Variovorax TaxID=663243 RepID=A0A1H7EQK3_9BURK)

HSP 1 Score: 170 bits (430), Expect = 2.450e-44
Identity = 98/261 (37.55%), Postives = 146/261 (55.94%), Query Frame = 1
Query:    7 DTLSIGERWQVLAGARH----ADVADFYGGKAKK----TSPSGAVIFKGAENSRLYGSYARSLQQGYRGPCQDRPDVTNACDIAPPIEAKQYEVGAKMRVGGSLDLTVAAFRIELPFDYVDEAQLLYGRFGNQVNQGVEFSAAGNILPNLAVVAGLGYLDAELARNEDATLDGNRIPGIPQWNANVFANYGVHGVPGLSLTAGAYWGGSRMLDVRNAIPVDGYTRIDIGAQYRMPMVLKGLTLRANVNNVTDKFYWEGLNF 765
            DT+S   +WQ+L GARH    +D+   Y G  K     T P+ +V++K +E + +Y +Y    +QG   P        NA     PI+++QYE+G K RV   L LT AAF ++ P   V  A  ++ + G Q ++GVEF+A G I P L+ +AG+ +LDAE     DA L+G R   + ++ ANVF +Y +  VPGLS   G Y  G+R LD  N + V  +TR D+GA Y    + K   +R ++ NVT++ YW  +N+
Sbjct:  577 DTISFTPQWQLLLGARHIAYGSDIGSKYDGTPKYSTRVTVPTLSVMYKPSERTTVYATYGEGFEQGAYAPSY----ADNALQKLGPIKSRQYEIGVKSRVLDGLMLTAAAFDMDKPLQAVSPADNIFRQQGRQRHRGVEFTANGEITPQLSGIAGVSWLDAEQRDTGDAALEGRRPSNVARFQANVFLDYRLASVPGLSFNTGVYHVGNRPLDRANTMIVPSFTRWDLGAAYVTRWMGKSSVIRLSIENVTNRRYWSSVNY 833          
BLAST of mRNA_P-wetherbeei_contig18077.1.1 vs. uniprot
Match: A0A3R9ZUH5_9BURK (TonB-dependent receptor n=3 Tax=Bacteria TaxID=2 RepID=A0A3R9ZUH5_9BURK)

HSP 1 Score: 169 bits (429), Expect = 3.680e-44
Identity = 95/261 (36.40%), Postives = 148/261 (56.70%), Query Frame = 1
Query:    7 DTLSIGERWQVLAGARH----ADVADFYGGKAKKTS----PSGAVIFKGAENSRLYGSYARSLQQGYRGPCQDRPDVTNACDIAPPIEAKQYEVGAKMRVGGSLDLTVAAFRIELPFDYVDEAQLLYGRFGNQVNQGVEFSAAGNILPNLAVVAGLGYLDAELARNEDATLDGNRIPGIPQWNANVFANYGVHGVPGLSLTAGAYWGGSRMLDVRNAIPVDGYTRIDIGAQYRMPMVLKGLTLRANVNNVTDKFYWEGLNF 765
            DT+S   +WQ+L GARH    +D+   Y G  K T+    P+ +V++K  E + +Y +Y    +QG   P        NA     PI+++QYE+G K RV   L +T AAF ++ P   V  +  ++ + G+Q ++G+E +A G I P L+ +AG+ +LDAE     DA L+G R   + ++ ANVF +Y +  VPGLS   G Y  G+R LD  N + V G+TR D+GA Y   ++ K   +R ++ NVT++ YW  +N+
Sbjct:  608 DTISFTPQWQLLLGARHISYSSDIGSKYDGTPKYTTRVTVPTLSVMYKPTERTTVYATYGEGFEQGAYAPSY----AENALQKLGPIKSRQYEIGVKSRVLDGLMVTAAAFDMDKPLQAVTPSDNIFRQKGSQRHRGIELTANGEITPQLSGIAGVSWLDAEQRDTGDAALEGRRPSNVARFQANVFLDYRLASVPGLSFNTGVYHVGNRPLDRANTMIVPGFTRWDLGAAYVTKLMGKSSVIRLSIENVTNRRYWSSVNY 864          
BLAST of mRNA_P-wetherbeei_contig18077.1.1 vs. uniprot
Match: UPI001C81599C (TonB-dependent siderophore receptor n=1 Tax=Noviherbaspirillum aridicola TaxID=2849687 RepID=UPI001C81599C)

HSP 1 Score: 168 bits (425), Expect = 5.220e-44
Identity = 96/281 (34.16%), Postives = 151/281 (53.74%), Query Frame = 1
Query:    7 DTLSIGERWQVLAGARH----------ADVADFYGGKAKKTSPSGAVIFKGAENSRLYGSYARSLQQGYRGPCQDRPDVTNACDIAPPIEAKQYEVGAKMRVGGSLDLTVAAFRIELPFDYVDEAQLLYGRFGNQVNQGVEFSAAGNILPNLAVVAGLGYLDAELARNEDATLDGNRIPGIPQWNANVFANYGVHGVPGLSLTAGAYWGGSRMLDVRNAIPVDGYTRIDIGAQYRMPMVLKGLTLRANVNNVTDKFYWEGLNFESYSAALGRTYSITAELK 819
            D LS GERWQ + GARH              + Y  +   T PSG +IF+       Y SY+  L+QG   P        NA ++  P++++Q E G K  +   L    A + IE     ++   + Y + G Q ++G+E + +G +  +LA+VAGLG++D E   N+D    G R P +P+  A++F +Y V G+ GL +  GAY+ G+R LD  N + +  YTR D+GA+Y   +  +  T+RA+V+N+TDK YW   +F S      RT S++A+++
Sbjct:  431 DLLSFGERWQAIVGARHIRYHNEFTRPGTPTEHY--RKNSTVPSGGLIFRPTRRVMTYASYSEGLEQGGIAPFNS----ANAGEVMNPVKSEQLEAGIKAELLDELSFGAAVYEIEKGLQAINSDNV-YVQDGRQRHRGLELTVSGQLTRDLALVAGLGFIDTEQVGNDDVRTRGKRTPNVPRRQASIFIDYRVPGIAGLHVNGGAYYVGARPLDGSNTVELPAYTRFDLGARYVTTIGGRKTTVRAHVDNLTDKRYWAAASFGSVYPGKPRTVSVSAQVE 704          
BLAST of mRNA_P-wetherbeei_contig18077.1.1 vs. uniprot
Match: A0A1E4IV27_9BURK (STN domain-containing protein n=2 Tax=Variovorax TaxID=34072 RepID=A0A1E4IV27_9BURK)

HSP 1 Score: 161 bits (408), Expect = 1.990e-41
Identity = 91/261 (34.87%), Postives = 141/261 (54.02%), Query Frame = 1
Query:    7 DTLSIGERWQVLAGARHADVADFYGGK--------AKKTSPSGAVIFKGAENSRLYGSYARSLQQGYRGPCQDRPDVTNACDIAPPIEAKQYEVGAKMRVGGSLDLTVAAFRIELPFDYVDEAQLLYGRFGNQVNQGVEFSAAGNILPNLAVVAGLGYLDAELARNEDATLDGNRIPGIPQWNANVFANYGVHGVPGLSLTAGAYWGGSRMLDVRNAIPVDGYTRIDIGAQYRMPMVLKGLTLRANVNNVTDKFYWEGLNF 765
            DTLS   +WQ+L GAR+ D +   G K         + T P+ ++++K +E + +Y +Y    +QG  GP        NA     PI+++QYE+G K RV   L LT A F ++ P   V  +  ++ + G Q ++GVEF+A G I P L+ +AG+ +LDAE     DA L+G R   + ++ ANVF +Y +  VPGLS   G Y  G+R LD  N + V  +TR D+G  Y   +      +R ++ N  ++ YW  +N+
Sbjct:  521 DTLSFTPQWQLLLGARYIDYSSDIGSKYDGTPRYSTRVTVPTLSLMYKPSERTTVYATYGEGFEQGAYGPSY----ADNALQKLGPIKSRQYEIGVKSRVRDGLMLTAAVFDMDKPLQAVTPSDNIFRQQGRQRHRGVEFTANGEITPQLSGIAGVAWLDAEQRDTGDAALEGRRPSNVARFQANVFLDYRLSSVPGLSFNTGIYHVGNRPLDRANTMIVPAFTRWDLGTAYATRLAGVPSVIRLSIENAANRRYWSSVNY 777          
BLAST of mRNA_P-wetherbeei_contig18077.1.1 vs. uniprot
Match: A0A3M3WM16_PSEAP (TonB-dependent siderophore receptor n=3 Tax=Pseudomonas syringae group TaxID=136849 RepID=A0A3M3WM16_PSEAP)

HSP 1 Score: 148 bits (374), Expect = 4.160e-40
Identity = 81/220 (36.82%), Postives = 121/220 (55.00%), Query Frame = 1
Query:   91 KKTSPSGAVIFKGAENSRLYGSYARSLQQGYRGPCQDRPDVTNACDIAPPIEAKQYEVGAKMRVGGSLDLTVAAFRIELPFDYVDEAQLLYGRFGNQVNQGVEFSAAGNILPNLAVVAGLGYLDAELARNEDATLDGNRIPGIPQWNANVFANYGVHGVPGLSLTAGAYWGGSRMLDVRNAIPVDGYTRIDIGAQYRMPMVLKGLTLRANVNNVTDKFYW 750
            +K SPSG +++K  ++  +Y +Y   L QG   P        N   I PP  ++Q EVGAK  +G S   T + FRI+ P    +    ++G  G + N GVE +  G  +    ++ G+ Y+D+EL    + T DGNR P  P++N N+ A + V GV GL+LT    + GS+ LD  N+  +D   R D+GA+Y   +  K +TLRANV NV +K+YW
Sbjct:   10 EKVSPSGGILYKVTDDFSVYANYMEGLSQGKIAPSTS----VNEDQIFPPFVSRQVEVGAKYDLG-SFAFTASVFRIKQPAYDTNTTSRVFGPNGKRRNDGVELTMFGEPMKGFRLLGGVMYIDSELTNTVNGTFDGNRAPATPKYNVNLGAEWDVPGVNGLTLTGRGIYTGSQYLDQANSKSIDSSERFDVGARYAFKVDQKDITLRANVENVMNKYYW 224          
BLAST of mRNA_P-wetherbeei_contig18077.1.1 vs. uniprot
Match: A0A522RBN2_9GAMM (TonB-dependent receptor (Fragment) n=1 Tax=Rhodanobacteraceae bacterium TaxID=2052182 RepID=A0A522RBN2_9GAMM)

HSP 1 Score: 149 bits (375), Expect = 1.100e-39
Identity = 95/283 (33.57%), Postives = 137/283 (48.41%), Query Frame = 1
Query:    7 DTLSIGERWQVLAGARH-----------ADVADFYGGKAKKTSPSGAVIFKGAENSRLYGSYARSLQQGYRGPCQDRPDVTNACDIAPPIEAKQYEVGAKMRVGGSLDLTVAAFRIELPFDYVDEAQLLYGRFGNQVNQGVEFSAAGNILPNLAVVAGLGYLDAELARNEDATLDGNRIPGIPQWNANVFANYGVHGVPGLSLTAGAYWGGSRMLDVRNAIPVDGYTRIDIGAQYRMPMVLKGLTLRANVNNVTDKFYWEGLNFESYSAALGRTYSITAELKL 822
            DT+S+G+ WQVLAGAR+               DF   +   T P+  ++FK AE    YG+Y    +QG   P        N      PI+++QYE+G K +   SL  T A F I+ P   VD A  ++ + G Q ++G+E +A G I P L+ + G  +LDA      +A L+G R     ++ AN F +Y    + GLSL+AG +  G R LD  N + VD Y R D GA Y    V +    R    NVTD  YW+   +        RT  ++  ++L
Sbjct:   17 DTVSLGDHWQVLAGARYLRYQSEAVAASGSRRDF---RVNSTIPTTGLLFKPAEAITFYGTYTEGFEQGAYAPVW----AANGGQRLDPIKSRQYEIGMKWQALPSLLATAAWFDIDKPLQEVDPADNVFKQHGRQRHRGLELTANGAITPRLSAIVGASWLDARQEDTGNAALEGKRPSNTARFQANAFIDYRPASIEGLSLSAGYFHVGDRFLDRANTVRVDAYGRWDAGAAYATRFVGRPSVFRLYAENVTDSRYWQSAIYGGVLQGNPRTVHLSMTVEL 292          
BLAST of mRNA_P-wetherbeei_contig18077.1.1 vs. uniprot
Match: UPI001C80B46F (TonB-dependent siderophore receptor n=1 Tax=Pseudomonas sp. NCCP-436 TaxID=2842481 RepID=UPI001C80B46F)

HSP 1 Score: 155 bits (392), Expect = 2.460e-39
Identity = 98/284 (34.51%), Postives = 151/284 (53.17%), Query Frame = 1
Query:    7 DTLSIGE---RWQVLAGARHADVADFYGGKAK-------KTSPSGAVIFKGAENSRLYGSYARSLQQGYRGPCQDRPDVTNACDIAPPIEAKQYEVGAKMRVGGSLDLTVAAFRIELPFDYVDEAQLLYGRFGNQVNQGVEFSAAGNILPNLAVVAGLGYLDAELARNEDATLDGNRIPGIPQWNANVFANYGVHGVPGLSLTAGAYWGGSRMLDVRNAIPVDGYTRIDIGAQYRMPMVLKGLTLRANVNNVTDKFYWEGLNF--ESYSAALG--RTYSITAEL 816
            DTLS  +   +W V A  ++ + A+  G + K       + SP+ A++FK  +   LYG+Y   L QG   P        NA ++  P   KQYEVGAK  +G     +VA F+IE P  YVD    +YG +G Q N+G+E+S  G   P L ++ G+ Y  A++ +  +  ++GN+I GIP+  A + A Y +  VPGL+LTA A + G R +     + +  +T  D+GA+Y   +  + +TLRA + N T+K YW G     +  S  LG  RT  ++A +
Sbjct:  464 DTLSFWDDRIQWTVGARRQNVESANLTGARVKTSKYDEHRLSPATALLFKVTDELSLYGNYIEGLSQGGTAPLT----ANNAGEVVSPYVTKQYEVGAKWDLG-QFATSVALFQIEKPSAYVDPVSNVYGTYGEQRNRGIEWSFFGETSPELRLMGGVSYTKAQMTKALNRNIEGNQISGIPRLIAKLGAEYDLQAVPGLTLTAAASYTGERYVTEDQRLQLPSHTLYDLGARYSTEVAARPVTLRATLQNATNKAYWLGSTQGGDGLSGGLGAPRTLQLSATI 742          
BLAST of mRNA_P-wetherbeei_contig18077.1.1 vs. uniprot
Match: A0A426V8S3_9BURK (TonB-dependent siderophore receptor n=1 Tax=Aquabacterium soli TaxID=2493092 RepID=A0A426V8S3_9BURK)

HSP 1 Score: 155 bits (391), Expect = 3.120e-39
Identity = 97/286 (33.92%), Postives = 152/286 (53.15%), Query Frame = 1
Query:   13 LSIGERWQVLAGARHADVADFYGGKAK------KTSPSGAVIFKGAENSRLYGSYARSLQQG------YRGPCQDRPDVTNACDIAPPIEAKQYEVGAKMRVGGSLDLTVAAFRIELPFDYVDEA----QLLYGRFGNQVNQGVEFSAAGNILPNLAVVAGLGYLDAELARNEDA-TLDGNRIPGIPQWNANVFANYGVHGVPGLSLTAGAYWGGSRMLDVRNAIPVDGYTRIDIGAQYRMPMVLKGLTLRANVNNVTDKFYWEGLNFESYSAALGRTYSITAELK 819
            +  G+RW  L G   + + D   G         + +PS +++FK   N  +YGSY  S+++G      Y G       VTN  +I PP+E++Q E+G K  VGG+L LT A F+I+    Y + A       + + G QV+ GVE ++ G +LP L VV G+  ++AE+ RN     L+G     + +  A V+A Y +  V GL+LT G Y+ G + +D  N   +  +T  DIGA+Y+  ++   LTLR N+NNVT+K YW   N    S    R+ +I+ +++
Sbjct:  452 IEFGDRWSALLGLTQSTIYDKAFGATTSVYDETRVTPSASLLFKPVPNVTVYGSYIESMEKGGTAAKTYSG-----QPVTNPDEIKPPLESQQIELGVKATVGGAL-LTAAVFQIDKGLQYYERAGNTGPYTFVQDGRQVHTGVELTSTGRVLPGLTVVGGVTIMNAEVTRNRQTPALEGKTPANVAEKFAKVYAEYDLPAVAGLTLTGGLYYTGKQSVDPLNTDGIPDFTTADIGARYKTKLINLPLTLRLNINNVTNKSYWLTAN----STGAPRSLAISGQIE 727          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18077.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3N7CA21_9BURK5.960e-4537.16TonB-dependent siderophore receptor n=4 Tax=unclas... [more]
A0A2E9BIF6_9BURK8.100e-4535.38TonB-dependent siderophore receptor n=3 Tax=unclas... [more]
A0A1H7EQK3_9BURK2.450e-4437.55Iron complex outermembrane recepter protein n=2 Ta... [more]
A0A3R9ZUH5_9BURK3.680e-4436.40TonB-dependent receptor n=3 Tax=Bacteria TaxID=2 R... [more]
UPI001C81599C5.220e-4434.16TonB-dependent siderophore receptor n=1 Tax=Novihe... [more]
A0A1E4IV27_9BURK1.990e-4134.87STN domain-containing protein n=2 Tax=Variovorax T... [more]
A0A3M3WM16_PSEAP4.160e-4036.82TonB-dependent siderophore receptor n=3 Tax=Pseudo... [more]
A0A522RBN2_9GAMM1.100e-3933.57TonB-dependent receptor (Fragment) n=1 Tax=Rhodano... [more]
UPI001C80B46F2.460e-3934.51TonB-dependent siderophore receptor n=1 Tax=Pseudo... [more]
A0A426V8S3_9BURK3.120e-3933.92TonB-dependent siderophore receptor n=1 Tax=Aquaba... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18077contigP-wetherbeei_contig18077:2..829 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1117958.PE143B_0118025
PFAMsPlug,STN,TonB_dep_Rec
Model size828
Max annot lvl1236|Gammaproteobacteria
KEGG koko:K02014
KEGG TC1.B.14
Hectar predicted targeting categoryother localisation
Exons1
Evalue8.55e-42
EggNOG OGsCOG4774@1|root,COG4774@2|Bacteria,1MVZD@1224|Proteobacteria,1RN2P@1236|Gammaproteobacteria
Descriptionreceptor
Cds size828
COG categoryP
BRITEko00000,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186135.7261636-CDS-P-wetherbeei_contig18077:1..8291683186135.7261636-CDS-P-wetherbeei_contig18077:1..829Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig18077 2..829 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18077.1.1prot_P-wetherbeei_contig18077.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig18077 2..829 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig18077.1.1

>prot_P-wetherbeei_contig18077.1.1 ID=prot_P-wetherbeei_contig18077.1.1|Name=mRNA_P-wetherbeei_contig18077.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=276bp
AADTLSIGERWQVLAGARHADVADFYGGKAKKTSPSGAVIFKGAENSRLY
GSYARSLQQGYRGPCQDRPDVTNACDIAPPIEAKQYEVGAKMRVGGSLDL
TVAAFRIELPFDYVDEAQLLYGRFGNQVNQGVEFSAAGNILPNLAVVAGL
GYLDAELARNEDATLDGNRIPGIPQWNANVFANYGVHGVPGLSLTAGAYW
GGSRMLDVRNAIPVDGYTRIDIGAQYRMPMVLKGLTLRANVNNVTDKFYW
EGLNFESYSAALGRTYSITAELKLQ*
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mRNA from alignment at P-wetherbeei_contig18077:2..829+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig18077.1.1 ID=mRNA_P-wetherbeei_contig18077.1.1|Name=mRNA_P-wetherbeei_contig18077.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=828bp|location=Sequence derived from alignment at P-wetherbeei_contig18077:2..829+ (Phaeothamnion wetherbeei SAG_119_79)
GCCGCCGATACGCTCTCGATCGGCGAGCGTTGGCAGGTTCTGGCCGGCGC GCGTCACGCCGACGTCGCGGATTTCTATGGCGGCAAGGCCAAGAAGACCA GCCCCTCGGGCGCGGTCATCTTCAAGGGCGCCGAAAACTCCAGACTCTAC GGAAGCTATGCCCGCAGCCTGCAGCAGGGTTACCGGGGTCCTTGCCAGGA CCGTCCCGACGTCACCAATGCGTGCGATATCGCGCCGCCCATCGAGGCGA AGCAATACGAAGTGGGCGCCAAAATGCGGGTGGGGGGCTCACTGGATCTG ACTGTCGCCGCATTCCGGATCGAGCTGCCCTTCGACTATGTGGATGAAGC GCAGCTGCTCTACGGGCGTTTCGGCAATCAGGTCAACCAGGGCGTGGAAT TCTCGGCGGCCGGCAATATCCTGCCGAATCTCGCGGTGGTCGCGGGACTC GGTTATCTCGACGCCGAGCTCGCCCGCAATGAAGACGCGACCCTGGATGG AAACCGGATTCCCGGAATTCCGCAGTGGAACGCGAACGTGTTCGCAAACT ACGGTGTGCATGGTGTCCCGGGTCTGTCACTCACCGCTGGGGCGTACTGG GGTGGTTCACGGATGCTCGACGTGCGCAACGCGATTCCGGTGGACGGTTA CACGCGCATCGACATTGGGGCGCAGTACCGTATGCCGATGGTGCTCAAGG GACTCACGCTGCGCGCCAACGTCAACAACGTGACGGACAAATTCTACTGG GAAGGGTTGAACTTCGAGAGCTACAGCGCGGCTCTCGGCAGAACCTACAG CATCACGGCGGAACTGAAGTTGCAGTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig18077:2..829+

>mRNA_P-wetherbeei_contig18077.1.1 ID=mRNA_P-wetherbeei_contig18077.1.1|Name=mRNA_P-wetherbeei_contig18077.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=828bp|location=Sequence derived from alignment at P-wetherbeei_contig18077:2..829+ (Phaeothamnion wetherbeei SAG_119_79)
GCCGCCGATACGCTCTCGATCGGCGAGCGTTGGCAGGTTCTGGCCGGCGC
GCGTCACGCCGACGTCGCGGATTTCTATGGCGGCAAGGCCAAGAAGACCA
GCCCCTCGGGCGCGGTCATCTTCAAGGGCGCCGAAAACTCCAGACTCTAC
GGAAGCTATGCCCGCAGCCTGCAGCAGGGTTACCGGGGTCCTTGCCAGGA
CCGTCCCGACGTCACCAATGCGTGCGATATCGCGCCGCCCATCGAGGCGA
AGCAATACGAAGTGGGCGCCAAAATGCGGGTGGGGGGCTCACTGGATCTG
ACTGTCGCCGCATTCCGGATCGAGCTGCCCTTCGACTATGTGGATGAAGC
GCAGCTGCTCTACGGGCGTTTCGGCAATCAGGTCAACCAGGGCGTGGAAT
TCTCGGCGGCCGGCAATATCCTGCCGAATCTCGCGGTGGTCGCGGGACTC
GGTTATCTCGACGCCGAGCTCGCCCGCAATGAAGACGCGACCCTGGATGG
AAACCGGATTCCCGGAATTCCGCAGTGGAACGCGAACGTGTTCGCAAACT
ACGGTGTGCATGGTGTCCCGGGTCTGTCACTCACCGCTGGGGCGTACTGG
GGTGGTTCACGGATGCTCGACGTGCGCAACGCGATTCCGGTGGACGGTTA
CACGCGCATCGACATTGGGGCGCAGTACCGTATGCCGATGGTGCTCAAGG
GACTCACGCTGCGCGCCAACGTCAACAACGTGACGGACAAATTCTACTGG
GAAGGGTTGAACTTCGAGAGCTACAGCGCGGCTCTCGGCAGAACCTACAG
CATCACGGCGGAACTGAAGTTGCAGTGA
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