mRNA_P-wetherbeei_contig18076.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig18076.2.1
Unique NamemRNA_P-wetherbeei_contig18076.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig18076.2.1 vs. uniprot
Match: UPI0010A2F98B (tetratricopeptide repeat protein n=1 Tax=Herbaspirillum sp. ST 5-3 TaxID=2567936 RepID=UPI0010A2F98B)

HSP 1 Score: 345 bits (885), Expect = 9.950e-111
Identity = 163/307 (53.09%), Postives = 214/307 (69.71%), Query Frame = 1
Query:   13 NEGLCRLALGDFVLGWEKYEWRWKTAQ-RGSVRDFREPLWTGDQDLRGRTILLHAEQGLGDTLQFCRYAKKVAGLGATVVLEVQKPLKALLSSLEGVAQVIARGEPLPAFDFHCPLLSLPLAFRTTLADIPADSPYLRCDPDEVERWAGRLRTGTMPRVGLVWRSASA-----KRSVPLEAFLRLAKGRAQFFSLQRDLSPGEQQVLDSRIDILQVGTELRNFADSP-IVELMDLVITVDTSMAHLAGALGRSTWVLLACGGEWRWMLGRRDSPWYPRTRLFRSPSPGDWETVLGEVGEALDAELLQ 912
            NEGLCRL +GDF LGW++ E RW++ Q + + R F +PLW G++ + GRT+LLH+EQGLGDTLQFCRYA  +A  GATV+LEVQ  L +LL  L+GV  + A+GE LPAFD+HCPLLSLPLAF+T L  IPA  PYL CDPD +  W  RL  G  PR+GLVW           RS+PL  F R+   +AQF  L +++   ++  LD R D+L VG ++ +FAD+  ++ELMDLVITVDTS+AHLAG +G+  W+LL    +WRW+L R DSPWYP  RLFR P PGDW++VL  + + +   +L+
Sbjct:  382 NEGLCRLLIGDFALGWQQCESRWQSTQLKAAHRKFSQPLWLGEEPVNGRTVLLHSEQGLGDTLQFCRYASLLAAQGATVLLEVQPALTSLLGELDGVHMIYAKGETLPAFDYHCPLLSLPLAFKTRLDTIPASVPYLHCDPDRLAMWRTRLGHGPGPRIGLVWSGNPTHQNDHNRSIPLADFSRIVSCQAQFVCLHKEVRDSDRAFLDQRDDVLFVGDDIDDFADTAALIELMDLVITVDTSVAHLAGGMGKPVWILLPYNPDWRWLLDRSDSPWYPTARLFRQPRPGDWDSVLAALADEISQSILR 688          
BLAST of mRNA_P-wetherbeei_contig18076.2.1 vs. uniprot
Match: A0A1G8I4Q9_9RHOO (Tfp pilus assembly protein PilF n=2 Tax=Propionivibrio dicarboxylicus TaxID=83767 RepID=A0A1G8I4Q9_9RHOO)

HSP 1 Score: 339 bits (870), Expect = 1.010e-108
Identity = 166/310 (53.55%), Postives = 210/310 (67.74%), Query Frame = 1
Query:    7 HWNEGLCRLALGDFVLGWEKYEWRWKTAQ-RGSVRDFREPLWTGDQDLRGRTILLHAEQGLGDTLQFCRYAKKVAGLGATVVLEVQKPLKALLSSLEGVAQVIARGEPLPAFDFHCPLLSLPLAFRTTLADIPADSPYLRCDPDEVERWAGRL-RTGTMPRVGLVWR-----SASAKRSVPLEAFLRLAKGRAQFFSLQRDLSPGEQQVLDSRIDILQVGTELRNFADSP-IVELMDLVITVDTSMAHLAGALGRSTWVLLACGGEWRWMLGRRDSPWYPRTRLFRSPSPGDWETVLGEVGEALDAELLQ 912
            H N  LC L LGDF  GW  +EWRWKT + R + R+F  PLW G +DL GRTILLHAEQG GDT+QFCRYA+ VA  GATV+LEVQ PLK+L+++L+GV+QV+A+GE LP FD+HCPL+SLPLAF T L+ IPA   YL  DP +  +W  RL  TG  PR+G+ W      +    RS+PL  F RL   +AQF SLQ  L PGE+++ ++    +  G  LR+F+D+  +++ MDLVI VDT++AHLAGALG+  WVLL    +WRW LGR DSPWYP  RLFR   PG+W+  L     AL A   Q
Sbjct:  368 HLNAALCHLLLGDFKRGWPAFEWRWKTEKYRAARREFAAPLWLGAEDLTGRTILLHAEQGFGDTIQFCRYARCVAERGATVLLEVQAPLKSLMATLDGVSQVLAKGETLPEFDYHCPLMSLPLAFATELSTIPASGHYLSSDPGQQAQWHERLPATGKEPRIGIAWSGNPGFANDRNRSIPLANFARLFSTQAQFVSLQPSLRPGEREIFEANDKAVHCGDLLRDFSDTAALIDTMDLVIAVDTAVAHLAGALGKPVWVLLPYNNDWRWQLGREDSPWYPSARLFRQTRPGEWDETLARTAAALSANATQ 677          
BLAST of mRNA_P-wetherbeei_contig18076.2.1 vs. uniprot
Match: UPI001455E2AA (tetratricopeptide repeat protein n=1 Tax=Herbaspirillum sp. ST 5-3 TaxID=2567936 RepID=UPI001455E2AA)

HSP 1 Score: 340 bits (873), Expect = 5.530e-108
Identity = 162/313 (51.76%), Postives = 214/313 (68.37%), Query Frame = 1
Query:    1 ESHWNEGLCRLALGDFVLGWEKYEWRWKTAQRG-SVRDFREPLWTGDQDLRGRTILLHAEQGLGDTLQFCRYAKKVAGLGATVVLEVQKPLKALLSSLEGVAQVIARGEPLPAFDFHCPLLSLPLAFRTTLADIPADSPYLRCDPDEVERWAGRLRTGTMPRVGLVWRSASA-----KRSVPLEAFLRLAKGRAQFFSLQRDLSPGEQQVLDSRIDILQVGTELRNFADSP-IVELMDLVITVDTSMAHLAGALGRSTWVLLACGGEWRWMLGRRDSPWYPRTRLFRSPSPGDWETVLGEVGEALDAELLQRA 918
            + ++NE L RL +GDF LGW KYE+RW+  Q   +   F +PLW G++ + G+T+LLH+EQGLGDTLQFCRYA  +A  GATV+LEVQ  L +LL  L+GV  + A+GE LPAFD+HCPLLSLPLAF+T L  IPA  PYL CDPD +  W  RL  G  PR+GLVW           RS+PL  F R+   +AQF  L +++   ++  LD R D+L VG ++ +FAD+  ++ELMDLVITVDTS+AHLAG +G+  W+LL    +WRW+L R DSPWYP  RLFR P PGDW++VL  + + +   +L+ A
Sbjct:  481 DGYYNEALTRLLIGDFALGWPKYEFRWQINQFDITSHQFSQPLWLGEEPVDGKTVLLHSEQGLGDTLQFCRYASLLAAQGATVLLEVQPALTSLLGELDGVHMIYAKGETLPAFDYHCPLLSLPLAFKTRLDTIPASVPYLHCDPDRLAMWRTRLGHGPGPRIGLVWSGNPTHQNDHNRSIPLADFSRIVSCQAQFVCLHKEVRDSDRAFLDQRDDVLFVGDDIDDFADTAALIELMDLVITVDTSVAHLAGGMGKPVWILLPYNPDWRWLLDRADSPWYPTARLFRQPCPGDWDSVLAALADEISQSILRAA 793          
BLAST of mRNA_P-wetherbeei_contig18076.2.1 vs. uniprot
Match: A0A536TBM1_9PROT (Tetratricopeptide repeat protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536TBM1_9PROT)

HSP 1 Score: 332 bits (852), Expect = 6.540e-107
Identity = 163/297 (54.88%), Postives = 209/297 (70.37%), Query Frame = 1
Query:   25 CRLALGDFVLGWEKYEWRWKTAQRGSVR-DFREPLWTGDQDLRGRTILLHAEQGLGDTLQFCRYAKKVAGLGATVVLEVQKPLKALLSSLEGVAQVIARGEPLPAFDFHCPLLSLPLAFRTTLADIPADSPYLRCDPDEVERWAGRLRTGTMPRVGLVWRSASA----KRSVPLEAFLRLAKGRAQFFSLQRDLSPGEQQVLDSRIDILQVGTELRNFADSP-IVELMDLVITVDTSMAHLAGALGRSTWVLLACGG-EWRWMLGRRDSPWYPRTRLFRSPSPGDWETVLGEVGEAL 894
            C L LGDF  GW++YEWRWK  QR S R +FR+PLW G + L+GRTILLH+E GLGDTL FCRYAKKVA LGA VVLE+Q  L  LL+ LEGV Q + RG PLP FD+HCPL+SLPLAF+T L++IPAD PY+R D + V  W  +L     PRVG+VW  ++A    KRS+ L   L L +  A++ SLQ+++   E  +L SR D+  VG EL++F D+  +VELMD+++TVDTS+AH+AGA+G+  W+ +     +WRWML R DS WYP  RLFR P  GDW +V+G V E L
Sbjct:  300 CYLLLGDFSRGWQEYEWRWKLEQRDSGRREFRQPLWLGRETLQGRTILLHSELGLGDTLLFCRYAKKVAALGAKVVLEIQPALLPLLADLEGVTQAVPRGAPLPVFDYHCPLMSLPLAFKTDLSNIPADIPYIRSDVERVAAWQAKLGRKNKPRVGVVWSGSTALRNDKRSMTLRDMLALLREWAEWISLQKEVRESETALLASRADLRHVGAELKDFGDTAALVELMDVLVTVDTSVAHVAGAMGKPVWIFVPFNPHDWRWMLDREDSMWYPTARLFRQPENGDWASVVGRVNEEL 596          
BLAST of mRNA_P-wetherbeei_contig18076.2.1 vs. uniprot
Match: A0A536ZKS9_9PROT (Tetratricopeptide repeat protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536ZKS9_9PROT)

HSP 1 Score: 322 bits (826), Expect = 5.600e-104
Identity = 158/297 (53.20%), Postives = 206/297 (69.36%), Query Frame = 1
Query:   25 CRLALGDFVLGWEKYEWRWKTAQRGSVR-DFREPLWTGDQDLRGRTILLHAEQGLGDTLQFCRYAKKVAGLGATVVLEVQKPLKALLSSLEGVAQVIARGEPLPAFDFHCPLLSLPLAFRTTLADIPADSPYLRCDPDEVERWAGRLRTGTMPRVGLVWRSASA----KRSVPLEAFLRLAKGRAQFFSLQRDLSPGEQQVLDSRIDILQVGTELRNFADSP-IVELMDLVITVDTSMAHLAGALGRSTWVLLACGG-EWRWMLGRRDSPWYPRTRLFRSPSPGDWETVLGEVGEAL 894
            CRL LGDF  GW++YEWRWK  QR + R DF++PLW G + L GRTILLH+E GLGDTL FCRYAK+VAGLGA VVLEVQ PL  LL+ LEGV Q + RG  LP FD+HCPL+SLPLAF+T L++IPA  PY+  +   V  W  +L   + PRVG+VW  + A    +RS+ L   L L +  A++ SLQ+++   E  +L SR D+   G EL +FAD+  ++ELMD+V+TVDTS+ H+AGA+G+  W+LL     +WRWML R DSPWYP  RLFR  +  DW +++ +V E L
Sbjct:  221 CRLLLGDFARGWQEYEWRWKLEQRDNGRRDFQQPLWLGGETLEGRTILLHSELGLGDTLLFCRYAKEVAGLGAKVVLEVQPPLLPLLADLEGVTQAMPRGALLPEFDYHCPLMSLPLAFKTDLSNIPAKIPYIHSNAARVAAWQAKLGKKSKPRVGIVWSGSKALRNDRRSMTLAEMLPLVRDWAEWISLQKEVRESEAALLASRADLRHAGAELEDFADTAALIELMDVVVTVDTSVTHVAGAMGKPVWILLPFNPHDWRWMLDREDSPWYPTARLFRQSTDRDWASLVSQVNEEL 517          
BLAST of mRNA_P-wetherbeei_contig18076.2.1 vs. uniprot
Match: A0A1S8FBD9_9BURK (Uncharacterized protein n=1 Tax=Polaromonas sp. A23 TaxID=1944133 RepID=A0A1S8FBD9_9BURK)

HSP 1 Score: 319 bits (817), Expect = 3.110e-103
Identity = 161/306 (52.61%), Postives = 201/306 (65.69%), Query Frame = 1
Query:   10 WNEGLCRLALGDFVLGWEKYEWRWKTAQ-RGSVRDFREPLWTGDQDLRGRTILLHAEQGLGDTLQFCRYAKKVAGLGATVVLEVQKPLKALLSSLEGVAQVIARGEPLPAFDFHCPLLSLPLAFRTTLADIPADSPYLRCDPDEVERWAGRLRTGTMPRVGLVWRSASA-----KRSVPLEAFLRLAKGRAQFFSLQRDLSPGEQQVLDSRIDILQVGTELRNFADSP-IVELMDLVITVDTSMAHLAGALGRSTWVLLACGGEWRWMLGRRDSPWYPRTRLFRSPSPGDWETVLGEVGEALDAEL 906
            WNEGLCRL +GDF  GW KYEWRWK      S+R+F +PLW G + L G+TILLHAEQGLGDT+QFCRYA++VA LGA VVLEVQ PLK LL  LEG + V+ +GE LP FDFHCPL+SLPLAF+  +  I   S YL  DP +   W  RL      +VGLVW  ++       RS+ LE    L   +A ++ LQ++  P E   L S   I  +G  L++F+D+  +V LMD+VITVDTS+AHLAGA+G+  WVLL    +WRW+L R DSPWY   RLFR P+ GDW +VL +V   L A  
Sbjct:  171 WNEGLCRLLMGDFTGGWPKYEWRWKREPGSSSLRNFIQPLWLGKEKLAGKTILLHAEQGLGDTIQFCRYARQVAALGARVVLEVQPPLKMLLQDLEGASLVLGQGERLPGFDFHCPLMSLPLAFQVNMGSITG-SGYLHSDPKKFAEWQTRLGNVRQKKVGLVWSGSAGHPHDRSRSLSLEDIKTLVTAQASYYCLQKEWRPAEPPALISASGIEVLGDALKDFSDTAAVVALMDVVITVDTSVAHLAGAMGKEVWVLLPFSPDWRWLLDRNDSPWYGSARLFRQPALGDWASVLMQVQAVLKARF 475          
BLAST of mRNA_P-wetherbeei_contig18076.2.1 vs. uniprot
Match: UPI0010A453AA (tetratricopeptide repeat-containing glycosyltransferase family protein n=1 Tax=Herbaspirillum sp. ST 5-3 TaxID=2567936 RepID=UPI0010A453AA)

HSP 1 Score: 311 bits (797), Expect = 1.110e-99
Identity = 156/300 (52.00%), Postives = 193/300 (64.33%), Query Frame = 1
Query:   16 EGLCRLALGDFVLGWEKYEWRWKTAQRGSVR-DFREPLWTGDQDLRGRTILLHAEQGLGDTLQFCRYAKKVAGLGATVVLEVQKPLKALLSSLEGVAQVIARGEPLPAFDFHCPLLSLPLAFRTTLADIPADSPYLRCDPDEVERWAGRLRTGTMPRVGLVWRSA-----SAKRSVPLEAFLRLAKGRAQFFSLQRDLSPGEQQVLDSRIDILQVGTELRNFADSP-IVELMDLVITVDTSMAHLAGALGRSTWVLLACGGEWRWMLGRRDSPWYPRTRLFRSPSPGDWETVLGEVGEAL 894
            EG CRL +GD  LGW+KY WRWK  Q  S+        W GD+ +RG+T+ +HAEQGLGDT+ FCRY K +A  GATV+L  Q PL +LL+ L+GV  + A GE LP FD +CPLLSLPL F T L  IPA+ PYL  DPD    W  RL  GT+PRVG+ W  +        RS+ L  F R+    AQF SLQ+++   ++  L  R DIL  G  L +FAD+  +VE MDLVITVDTS+AHLAGALG+  W+LL    +WRWML R DSPWYP  RLFR P  GDW++V+  V   L
Sbjct:  212 EGSCRLLMGDLELGWQKYHWRWKCKQFNSINATLTCRPWLGDEPIRGKTLFVHAEQGLGDTIHFCRYIKLLAERGATVLLAAQAPLTSLLADLDGVHMIYAMGESLPEFDLYCPLLSLPLIFNTRLNSIPANVPYLHSDPDRTALWRRRLGHGTLPRVGIAWAGSLIHENDRNRSIALSVFSRIVSRHAQFASLQKEVRESDKAELGRRGDILFFGDFLDDFADTAALVESMDLVITVDTSVAHLAGALGKPVWILLPFIPDWRWMLDRSDSPWYPSARLFRQPRMGDWDSVIAAVANEL 511          
BLAST of mRNA_P-wetherbeei_contig18076.2.1 vs. uniprot
Match: A0A536XML4_9PROT (Tetratricopeptide repeat protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536XML4_9PROT)

HSP 1 Score: 312 bits (800), Expect = 3.710e-99
Identity = 157/301 (52.16%), Postives = 205/301 (68.11%), Query Frame = 1
Query:   25 CRLALGDFVLGWEKYEWRWKTAQRG-SVRDFREPLWTGDQDLRGRTILLHAEQGLGDTLQFCRYAKKVAGLGATVVLEVQKPLKALLSSLEGVAQVIARGEPLPAFDFHCPLLSLPLAFRTTLADIPADSPYLRCDPDEVERWAGRLRTGTMPRVGLVWRSASA----KRSVPLEAFLRLAKGRAQFFSLQRDLSPGEQQVLDSRIDILQVGTELRNFADSP-IVELMDLVITVDTSMAHLAGALGRSTWVLLACGG-EWRWMLGRRDSPWYPRTRLFRSPSPGDWETVLGEVGEALDAEL 906
            CRL LGDF LGW++YEWRW+  + G S R+F +PLW G   L G+T+LLH+E GLGDTLQFCRYAK VA LGA VV+EVQ PL  LL+ L+GVAQV+ RG  LP FD+HCPL+SL LAFRT L  +PA  PY+R DP  V  W  RL   + PRVGL W  +      KRS+ L   L L +  A++ SLQ+++   +  +L SR D+ +V  +L +FAD+  ++EL+D+V+TVDTS+AHLAGA+G+  W+LL     +WRW+LGR DSPWYP  RLFR  +  DW  ++  V + L  E 
Sbjct:  296 CRLLLGDFPLGWKEYEWRWQLKRGGDSGRNFVQPLWLGATPLEGKTVLLHSELGLGDTLQFCRYAKDVAALGAQVVMEVQPPLLRLLADLDGVAQVVPRGGSLPPFDYHCPLMSLALAFRTNLDSVPARIPYIRSDPASVRVWIERLGERSKPRVGLAWSGSKTLKNDKRSMTLAEMLPLVREWAEWISLQKEVRETDTALLASRPDLRRVDGDLGDFADTASLIELVDIVVTVDTSVAHLAGAMGKPVWILLPFNPHDWRWLLGREDSPWYPTARLFRQSAVDDWTNLVRRVDKELMREF 596          
BLAST of mRNA_P-wetherbeei_contig18076.2.1 vs. uniprot
Match: A0A6J4ZX02_9BURK (Beta-barrel assembly-enhancing protease n=1 Tax=Paraburkholderia sediminicola TaxID=458836 RepID=A0A6J4ZX02_9BURK)

HSP 1 Score: 315 bits (807), Expect = 1.040e-98
Identity = 158/305 (51.80%), Postives = 202/305 (66.23%), Query Frame = 1
Query:    1 ESHWNEGLCRLALGDFVLGWEKYEWRWKTAQRGSV-RDFREPLWTGDQDLRGRTILLHAEQGLGDTLQFCRYAKKVAGLGATVVLEVQKPLKALLSSLEGVAQVIARGEPLPAFDFHCPLLSLPLAFRTTLADIPADSPYLRCDPDEVERWAGRLRTGTMPRVGLVWRSASA-----KRSVPLEAFLRLAKGRAQFFSLQRDLSPGEQQVLDSRIDILQVGTELRNFADSP-IVELMDLVITVDTSMAHLAGALGRSTWVLLACGGEWRWMLGRRDSPWYPRTRLFRSPSPGDWETVLGEVGEAL 894
            ++H+++    L  GDF  GW +YEWRW+  Q GS  RDF  P W G Q L G+ ILLHAEQG GDT+QFCRYA  V  LGA V+LEVQ  LK+LL  L+GV +++A+G+ LP FD HCPLLSLP AF T L  IP+  PYL+ DP  V++W  RL T + PRVG+VW           RS+ LE    +     ++ SLQ+ LS  ++ VLDS + +   G E+R+F+D+  ++EL DLV++VDTS+AHLAGALG+  WVLL    +WRW+  R DSPWYPR RLFR P PGDW  VL  V EAL
Sbjct:  426 DTHFSQAFVYLITGDFARGWPEYEWRWREPQVGSQKRDFAHPTWDGTQSLAGQRILLHAEQGFGDTMQFCRYAPLVKALGAHVILEVQPALKSLLRGLDGVDELVAQGDVLPIFDLHCPLLSLPRAFHTELDAIPSGPPYLQADPVLVDKWRARLGTASRPRVGIVWAGNPKHLDDHNRSIALEQLRPVLTDAYEWISLQKPLSDDDRAVLDS-LGVAYFGDEVRDFSDTAALIELTDLVLSVDTSVAHLAGALGKPCWVLLPHWPDWRWLFDRDDSPWYPRMRLFRQPGPGDWSNVLPRVSEAL 729          
BLAST of mRNA_P-wetherbeei_contig18076.2.1 vs. uniprot
Match: A0A849T5E4_9PROT (Tetratricopeptide repeat protein n=1 Tax=Methylophilaceae bacterium TaxID=2030816 RepID=A0A849T5E4_9PROT)

HSP 1 Score: 308 bits (788), Expect = 9.910e-98
Identity = 147/307 (47.88%), Postives = 200/307 (65.15%), Query Frame = 1
Query:    1 ESHWNEGLCRLALGDFVLGWEKYEWRWKTAQRGSVRDFREPLWTGDQDLRGRTILLHAEQGLGDTLQFCRYAKKVAGLGATVVLEVQKPLKALLSS-LEGVAQVIARGEPLPAFDFHCPLLSLPLAFRTTLADIPADSPYLRCDPDEVERWAGRLRTGTMPRVGLVWRSA-----SAKRSVPLEAFLRLAKGRAQFFSLQRDLSPGEQQVLDSRIDILQVGTELRNFADSP-IVELMDLVITVDTSMAHLAGALGRSTWVLLACGGEWRWMLGRRDSPWYPRTRLFRSPSPGDWETVLGEVGEALDA 900
            ++HWN  LC+L  GD    W++YEWRW++  +   R F +PLW G++ L  +TILLHAEQG GDTLQFCRY   V  LGA V+LEVQ  LK LL   L  +A V A+GE +P FDF CPL+SLPLAFRT L  IPA + YL  +   V  W  +L T T PRVG+VW         + RS+PL  F +L  G+A FF+LQ+++ P ++ +L     +++   ++ +FAD+  ++E MD+VITVDT++AHLA A+G++ W+LL    +WRW+L R DSPWY   RLFR P+ GDW  V+  V  AL +
Sbjct:  261 DAHWNLSLCKLLAGDLDAAWQEYEWRWRSELQNDKRQFIQPLWLGEESLHNKTILLHAEQGFGDTLQFCRYVALVQTLGANVLLEVQPELKRLLKGGLGEIATVYAKGEAMPEFDFQCPLMSLPLAFRTNLTSIPAKNAYLFSNKQRVAIWQKKLGTRTRPRVGVVWSGRVEHKNDSNRSIPLNEFAQLVNGKADFFALQKEIQPADKLLLKEHDGLIRHHFKIEDFADTAALIEFMDIVITVDTAVAHLAAAMGKTVWILLPFSPDWRWLLEREDSPWYASVRLFRQPAIGDWRDVIERVDIALQS 567          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18076.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0010A2F98B9.950e-11153.09tetratricopeptide repeat protein n=1 Tax=Herbaspir... [more]
A0A1G8I4Q9_9RHOO1.010e-10853.55Tfp pilus assembly protein PilF n=2 Tax=Propionivi... [more]
UPI001455E2AA5.530e-10851.76tetratricopeptide repeat protein n=1 Tax=Herbaspir... [more]
A0A536TBM1_9PROT6.540e-10754.88Tetratricopeptide repeat protein n=1 Tax=Betaprote... [more]
A0A536ZKS9_9PROT5.600e-10453.20Tetratricopeptide repeat protein n=1 Tax=Betaprote... [more]
A0A1S8FBD9_9BURK3.110e-10352.61Uncharacterized protein n=1 Tax=Polaromonas sp. A2... [more]
UPI0010A453AA1.110e-9952.00tetratricopeptide repeat-containing glycosyltransf... [more]
A0A536XML4_9PROT3.710e-9952.16Tetratricopeptide repeat protein n=1 Tax=Betaprote... [more]
A0A6J4ZX02_9BURK1.040e-9851.80Beta-barrel assembly-enhancing protease n=1 Tax=Pa... [more]
A0A849T5E4_9PROT9.910e-9847.88Tetratricopeptide repeat protein n=1 Tax=Methyloph... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18076contigP-wetherbeei_contig18076:459..1379 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog948106.AWZT01000014_gene630
PFAMsGlyco_transf_9,TPR_1,TPR_11,TPR_16,TPR_2,TPR_8
Model size921
Max annot lvl28216|Betaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue7.24e-94
EggNOG OGsCOG0457@1|root,COG0859@1|root,COG0457@2|Bacteria,COG0859@2|Bacteria,1MUZK@1224|Proteobacteria,2VHVG@28216|Betaproteobacteria,1KGHM@119060|Burkholderiaceae
Descriptionrepeat-containing protein
Cds size921
COG categoryM
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186135.685477-CDS-P-wetherbeei_contig18076:458..13791683186135.685477-CDS-P-wetherbeei_contig18076:458..1379Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig18076 459..1379 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18076.2.1prot_P-wetherbeei_contig18076.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig18076 459..1379 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig18076.2.1

>prot_P-wetherbeei_contig18076.2.1 ID=prot_P-wetherbeei_contig18076.2.1|Name=mRNA_P-wetherbeei_contig18076.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=307bp
ESHWNEGLCRLALGDFVLGWEKYEWRWKTAQRGSVRDFREPLWTGDQDLR
GRTILLHAEQGLGDTLQFCRYAKKVAGLGATVVLEVQKPLKALLSSLEGV
AQVIARGEPLPAFDFHCPLLSLPLAFRTTLADIPADSPYLRCDPDEVERW
AGRLRTGTMPRVGLVWRSASAKRSVPLEAFLRLAKGRAQFFSLQRDLSPG
EQQVLDSRIDILQVGTELRNFADSPIVELMDLVITVDTSMAHLAGALGRS
TWVLLACGGEWRWMLGRRDSPWYPRTRLFRSPSPGDWETVLGEVGEALDA
ELLQRA*
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mRNA from alignment at P-wetherbeei_contig18076:459..1379-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig18076.2.1 ID=mRNA_P-wetherbeei_contig18076.2.1|Name=mRNA_P-wetherbeei_contig18076.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=921bp|location=Sequence derived from alignment at P-wetherbeei_contig18076:459..1379- (Phaeothamnion wetherbeei SAG_119_79)
GAATCGCATTGGAATGAAGGGCTGTGCCGCCTGGCGCTGGGCGATTTCGT GCTTGGCTGGGAGAAATACGAATGGCGCTGGAAGACAGCGCAGCGGGGCT CGGTGCGCGATTTCCGCGAACCTCTATGGACGGGCGACCAGGACTTGCGC GGCAGGACGATCCTGCTGCATGCCGAGCAGGGCCTCGGCGACACGCTCCA GTTCTGTCGCTACGCGAAGAAAGTGGCGGGGCTCGGCGCGACCGTAGTGC TCGAGGTCCAGAAGCCCCTGAAGGCCTTGCTGTCGTCCCTGGAAGGTGTT GCGCAGGTGATTGCGCGGGGCGAGCCACTCCCGGCGTTCGATTTTCATTG TCCCTTGCTGAGCCTGCCACTGGCTTTCCGCACGACGCTCGCCGACATTC CCGCCGATAGTCCCTACCTGCGCTGCGATCCCGATGAGGTGGAGCGGTGG GCCGGCCGTCTGCGAACAGGCACCATGCCGCGGGTCGGGCTGGTGTGGAG GTCGGCGAGCGCAAAGCGCTCGGTGCCTTTGGAGGCATTTCTGCGCCTGG CCAAAGGGCGGGCGCAGTTCTTCAGCCTGCAGAGGGACCTTTCCCCGGGC GAGCAACAGGTCCTCGACAGCCGCATTGACATCCTGCAGGTCGGCACCGA GTTGCGAAACTTCGCTGATTCCCCGATCGTCGAACTGATGGACCTCGTCA TCACGGTCGACACCAGCATGGCGCATTTGGCGGGCGCGCTGGGCAGGAGC ACCTGGGTTCTGCTTGCCTGCGGCGGTGAGTGGCGCTGGATGCTTGGGCG GCGCGACAGCCCCTGGTATCCGCGGACCCGCCTCTTCCGGTCACCTTCGC CCGGCGATTGGGAAACGGTGCTGGGCGAAGTCGGCGAAGCACTTGATGCG GAGCTTCTGCAGCGGGCGTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig18076:459..1379-

>mRNA_P-wetherbeei_contig18076.2.1 ID=mRNA_P-wetherbeei_contig18076.2.1|Name=mRNA_P-wetherbeei_contig18076.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=921bp|location=Sequence derived from alignment at P-wetherbeei_contig18076:459..1379- (Phaeothamnion wetherbeei SAG_119_79)
GAATCGCATTGGAATGAAGGGCTGTGCCGCCTGGCGCTGGGCGATTTCGT
GCTTGGCTGGGAGAAATACGAATGGCGCTGGAAGACAGCGCAGCGGGGCT
CGGTGCGCGATTTCCGCGAACCTCTATGGACGGGCGACCAGGACTTGCGC
GGCAGGACGATCCTGCTGCATGCCGAGCAGGGCCTCGGCGACACGCTCCA
GTTCTGTCGCTACGCGAAGAAAGTGGCGGGGCTCGGCGCGACCGTAGTGC
TCGAGGTCCAGAAGCCCCTGAAGGCCTTGCTGTCGTCCCTGGAAGGTGTT
GCGCAGGTGATTGCGCGGGGCGAGCCACTCCCGGCGTTCGATTTTCATTG
TCCCTTGCTGAGCCTGCCACTGGCTTTCCGCACGACGCTCGCCGACATTC
CCGCCGATAGTCCCTACCTGCGCTGCGATCCCGATGAGGTGGAGCGGTGG
GCCGGCCGTCTGCGAACAGGCACCATGCCGCGGGTCGGGCTGGTGTGGAG
GTCGGCGAGCGCAAAGCGCTCGGTGCCTTTGGAGGCATTTCTGCGCCTGG
CCAAAGGGCGGGCGCAGTTCTTCAGCCTGCAGAGGGACCTTTCCCCGGGC
GAGCAACAGGTCCTCGACAGCCGCATTGACATCCTGCAGGTCGGCACCGA
GTTGCGAAACTTCGCTGATTCCCCGATCGTCGAACTGATGGACCTCGTCA
TCACGGTCGACACCAGCATGGCGCATTTGGCGGGCGCGCTGGGCAGGAGC
ACCTGGGTTCTGCTTGCCTGCGGCGGTGAGTGGCGCTGGATGCTTGGGCG
GCGCGACAGCCCCTGGTATCCGCGGACCCGCCTCTTCCGGTCACCTTCGC
CCGGCGATTGGGAAACGGTGCTGGGCGAAGTCGGCGAAGCACTTGATGCG
GAGCTTCTGCAGCGGGCGTAG
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