mRNA_P-wetherbeei_contig18070.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig18070.1.1 vs. uniprot
Match: D7G265_ECTSI (Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G265_ECTSI) HSP 1 Score: 142 bits (357), Expect = 2.670e-35 Identity = 70/139 (50.36%), Postives = 91/139 (65.47%), Query Frame = 3
Query: 216 KQNFAGYMCYSVIITGFIYPVIVHFVWSTGGWASAFNADESKLLFDCGAIDFAGSGVV---GGVSALMAIIVVGPRVGRFNEDGTMNIFPEQSSVLQSLGVFILWFGW*ESFHSFRLSVSTVTFNAS*TSTVVPSGDVA 623
+ F Y+ +S ++T FIYP++ H+ WS GGWASA AD+ LLF CG DFAGSGVV GG++ALM I ++GPR GRFNEDGT N P+QS+VLQ+LG F+LW+GW + FNA S+ V + VA
Sbjct: 131 RATFGAYVLHSFLLTSFIYPIVAHWAWSDGGWASARLADDDDLLFGCGVTDFAGSGVVHMTGGMAALMGIFILGPRAGRFNEDGTSNTMPQQSAVLQTLGTFMLWWGW-------------LGFNAGSVSSFVATPAVA 256
BLAST of mRNA_P-wetherbeei_contig18070.1.1 vs. uniprot
Match: D7FR22_ECTSI (Ammonium transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR22_ECTSI) HSP 1 Score: 140 bits (353), Expect = 9.260e-35 Identity = 71/106 (66.98%), Postives = 83/106 (78.30%), Query Frame = 3
Query: 222 NFAGYMCYSVIITGFIYPVIVHFVWSTGGWASAFNADESKLLFDCGAIDFAGSGVV---GGVSALMAIIVVGPRVGRFNEDGTMNIFPEQSSVLQSLGVFILWFGW 530
+F Y+ YSVI+T FIYPV+VH+ W+ GGWASA+ E+ LLF CG IDFAGSGVV GG++AL A IVVGPR GRFNEDGT N P+QS+VLQSLG ILWFGW
Sbjct: 147 SFNAYIIYSVILTSFIYPVVVHWGWA-GGWASAWR--ETDLLFGCGVIDFAGSGVVHMTGGLAALCAAIVVGPRTGRFNEDGTANTLPQQSAVLQSLGTLILWFGW 249
BLAST of mRNA_P-wetherbeei_contig18070.1.1 vs. uniprot
Match: A0A6H5J7X8_9PHAE (Ammonium transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7X8_9PHAE) HSP 1 Score: 139 bits (350), Expect = 2.550e-34 Identity = 63/108 (58.33%), Postives = 81/108 (75.00%), Query Frame = 3
Query: 216 KQNFAGYMCYSVIITGFIYPVIVHFVWSTGGWASAFNADESKLLFDCGAIDFAGSGVV---GGVSALMAIIVVGPRVGRFNEDGTMNIFPEQSSVLQSLGVFILWFGW 530
+ F Y+ +S +IT FIYP++ H+ WS GGWASA AD+ LLF CGAI+ AGSGVV GG++AL I ++GPR GRFNEDG+ N P+QS+VLQ+LG FILW+GW
Sbjct: 131 RATFGAYVLHSFLITSFIYPIVAHWAWSDGGWASARLADDDDLLFGCGAIELAGSGVVHMTGGMAALTGIFILGPRAGRFNEDGSSNTMPQQSAVLQTLGTFILWWGW 238
BLAST of mRNA_P-wetherbeei_contig18070.1.1 vs. uniprot
Match: D7G243_ECTSI (Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G243_ECTSI) HSP 1 Score: 135 bits (339), Expect = 9.780e-33 Identity = 75/123 (60.98%), Postives = 87/123 (70.73%), Query Frame = 3
Query: 222 NFAGYMCYSVIITGFIYPVIVHFVWSTGGWASAFNADESKLLFDCGAIDFAGSGVV---GGVSALMAIIVVGPRVGRFNEDGTMNIFPEQSSVLQSLGVFILWFGW*ESFHSFRLSVSTVTFN 581
+F Y+ YSVI+T FIYPV+VH+ W GGWASA+ DE LLFDCG IDFAGSGVV GG++AL A IVVGPR GRFNEDGT N P+QS+VLQ+LG ILWFG VST+ N
Sbjct: 151 SFNAYIIYSVILTSFIYPVVVHWGWG-GGWASAW-VDED-LLFDCGVIDFAGSGVVHMTGGLAALAAAIVVGPRTGRFNEDGTANTLPQQSAVLQTLGTLILWFG-----XXXXXXVSTLAIN 265
BLAST of mRNA_P-wetherbeei_contig18070.1.1 vs. uniprot
Match: D7G888_ECTSI (Ammonium transporter (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G888_ECTSI) HSP 1 Score: 123 bits (308), Expect = 2.890e-30 Identity = 57/97 (58.76%), Postives = 72/97 (74.23%), Query Frame = 3
Query: 216 KQNFAGYMCYSVIITGFIYPVIVHFVWSTGGWASAFNADESKLLFDCGAIDFAGSGVV---GGVSALMAIIVVGPRVGRFNEDGTMNIFPEQSSVLQ 497
+ F Y+ +S +IT FIYP++ H+ WS GGWASA AD+ LLF CG DFAGSGVV GG++ALM I ++GPRVGRFNEDG+ N P+QS+VLQ
Sbjct: 131 RATFGAYVLHSFLITSFIYPIVAHWAWSDGGWASARLADDDDLLFGCGVTDFAGSGVVHMTGGMAALMGIFILGPRVGRFNEDGSSNTMPQQSAVLQ 227
BLAST of mRNA_P-wetherbeei_contig18070.1.1 vs. uniprot
Match: W4G3J5_9STRA (Ammonium transporter n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G3J5_9STRA) HSP 1 Score: 121 bits (304), Expect = 1.120e-27 Identity = 67/138 (48.55%), Postives = 92/138 (66.67%), Query Frame = 3
Query: 222 NFAGYMCYSVIITGFIYPVIVHFVWSTGGWASAFNADESKLLFDCGAIDFAGSGVV---GGVSALMAIIVVGPRVGRFNEDGTMNIFPEQSSVLQSLGVFILWFGW*ESFHSFRLSVSTVTFNAS*TSTVVPSG-DVA 623
+F Y+ Y+V +T FIYPV+VH+VWS+ G+ASAFN + LL D GA+DFAGSGVV GG++AL+ ++GPR+GRF EDG ++ P+QS +LQ++G +LWFGW FN T T+V +G DVA
Sbjct: 157 SFVAYIAYAVALTAFIYPVVVHWVWSSTGFASAFNT-PNHLLLDVGAVDFAGSGVVHMTGGMAALVGCCILGPRLGRF-EDGQVHDMPKQSVLLQTIGTLLLWFGW-------------YGFNCMSTGTLVGNGADVA 279
BLAST of mRNA_P-wetherbeei_contig18070.1.1 vs. uniprot
Match: A0A7S2QUY7_9STRA (Ammonium transporter n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QUY7_9STRA) HSP 1 Score: 120 bits (301), Expect = 2.460e-27 Identity = 65/125 (52.00%), Postives = 84/125 (67.20%), Query Frame = 3
Query: 222 NFAGYMCYSVIITGFIYPVIVHFVWSTGGWASAFNADESKLLFDCGAIDFAGSGVV---GGVSALMAIIVVGPRVGRFNEDGTMNIFPEQSSVLQSLGVFILWFGW*ESFHSFRLSVSTVTFNAS 587
F Y+ YSV++T FIYPV+VH+ W+T GWASA+ ES+LLFDCG DFAGSGVV G V+AL+ VVGPR+GRF+E + P+QS V Q+LG ILW GW + L++ T T + S
Sbjct: 159 TFGCYIVYSVVLTSFIYPVVVHWGWNTYGWASAWR--ESELLFDCGVTDFAGSGVVHLCGAVAALVGAKVVGPRIGRFDEGIKL---PQQSVVFQTLGTLILWMGWYGFNGASTLAIGTSTGDLS 278
BLAST of mRNA_P-wetherbeei_contig18070.1.1 vs. uniprot
Match: A0A2J8A1L4_9CHLO (Ammonium transporter 1 member 3 (Fragment) n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8A1L4_9CHLO) HSP 1 Score: 115 bits (287), Expect = 3.150e-27 Identity = 57/112 (50.89%), Postives = 73/112 (65.18%), Query Frame = 3
Query: 210 RRKQNFAGYMCYSVIITGFIYPVIVHFVWSTGGWASAFNA--DESKLLFDCGAIDFAGSGVV---GGVSALMAIIVVGPRVGRFNEDGTMNIFPEQSSVLQSLGVFILWFGW 530
R++ +F Y+ YS I+ F+YPV VH++W + GW SAFN D + GAIDFAGSGVV GG SALM ++GPRVGRF+ DGT+N S+ L +G F LWFGW
Sbjct: 107 RQRCSFGAYLVYSFFISSFVYPVTVHWLWDSQGWLSAFNTQHDGYAAILRTGAIDFAGSGVVHMTGGFSALMGAAIIGPRVGRFSPDGTVNEMKGHSATLVVMGTFWLWFGW 218
BLAST of mRNA_P-wetherbeei_contig18070.1.1 vs. uniprot
Match: A0A8J5XG33_DIALT (Ammonium transporter n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XG33_DIALT) HSP 1 Score: 119 bits (297), Expect = 8.930e-27 Identity = 57/108 (52.78%), Postives = 71/108 (65.74%), Query Frame = 3
Query: 216 KQNFAGYMCYSVIITGFIYPVIVHFVWSTGGWASAFNADESKLLFDCGAIDFAGSGVV---GGVSALMAIIVVGPRVGRFNEDGTMNIFPEQSSVLQSLGVFILWFGW 530
+ A Y+CYS +T F+YPV+VH+VWS+ GW SAFNA L G +DFAG GVV GG+SA+ V GPR+GR++ DG+M P SS LQ LG FILW GW
Sbjct: 139 RTKMAAYLCYSFFLTAFVYPVVVHWVWSSAGWLSAFNASP---LLGTGLVDFAGCGVVHMVGGISAICGAYVCGPRIGRYDADGSMVDIPGHSSTLQVLGTFILWVGW 243
BLAST of mRNA_P-wetherbeei_contig18070.1.1 vs. uniprot
Match: A0A7S0Q2H3_9EUKA (Ammonium transporter n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q2H3_9EUKA) HSP 1 Score: 118 bits (296), Expect = 1.270e-26 Identity = 61/109 (55.96%), Postives = 76/109 (69.72%), Query Frame = 3
Query: 213 RKQNFAGYMCYSVIITGFIYPVIVHFVWSTGGWASAFNADESKLLFDCGAIDFAGSGVV---GGVSALMAIIVVGPRVGRFNEDGTMNIFPEQSSVLQSLGVFILWFGW 530
R Q FA Y+ Y+V+ITG+IYPV+VH+VWSTGG+ S FNAD + G IDFAGSGVV GGV+AL +++GPR GR+N + + P SSVL LG FILW GW
Sbjct: 137 RAQIFA-YLVYTVVITGWIYPVVVHWVWSTGGFLSTFNADYDNTILG-GCIDFAGSGVVHMTGGVAALCGAVIIGPRRGRYNSNKELQAMPGHSSVLVVLGTFILWLGW 243 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18070.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig18070.1.1 >prot_P-wetherbeei_contig18070.1.1 ID=prot_P-wetherbeei_contig18070.1.1|Name=mRNA_P-wetherbeei_contig18070.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=99bp MCYSVIITGFIYPVIVHFVWSTGGWASAFNADESKLLFDCGAIDFAGSGVback to top mRNA from alignment at P-wetherbeei_contig18070:298..1378- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig18070.1.1 ID=mRNA_P-wetherbeei_contig18070.1.1|Name=mRNA_P-wetherbeei_contig18070.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1081bp|location=Sequence derived from alignment at P-wetherbeei_contig18070:298..1378- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig18070:298..1378- >mRNA_P-wetherbeei_contig18070.1.1 ID=mRNA_P-wetherbeei_contig18070.1.1|Name=mRNA_P-wetherbeei_contig18070.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=297bp|location=Sequence derived from alignment at P-wetherbeei_contig18070:298..1378- (Phaeothamnion wetherbeei SAG_119_79)back to top |