mRNA_P-wetherbeei_contig18066.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig18066.1.1 vs. uniprot
Match: A0A182GEU4_AEDAL (Uncharacterized protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GEU4_AEDAL) HSP 1 Score: 95.1 bits (235), Expect = 3.340e-21 Identity = 60/135 (44.44%), Postives = 78/135 (57.78%), Query Frame = 1
Query: 1 LVGYSDANLAGCLDSGRSTTGGLFLLAGGVAAFSSRLQDSAARSAMESEYKALFDAAQKEEQLRTLLAHLGLELTAPTVIHEDNTAVLAVPMAAGHTRQSRHIRTRYHFTRELVAAGVIAMEQVSTAGQLAYGLT 405
LVGYSDA+ AG + +S +G LF L G +++SR Q S ME+EY AL +AAQ+ LR LL L E T PTVI EDN + L + ++S+H+ TRYH+TRELV I + T LA LT
Sbjct: 96 LVGYSDADWAGDANDRKSCSGFLFGLGGATVSWTSRKQTCVTMSTMEAEYVALSEAAQEAVWLRGLLKELNEEQTKPTVIFEDNRSCLDFAVLDQQRKRSKHVDTRYHYTRELVTQKQIELRYCPTDEMLADVLT 230
BLAST of mRNA_P-wetherbeei_contig18066.1.1 vs. uniprot
Match: A0A182G3L3_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Aedes albopictus TaxID=7160 RepID=A0A182G3L3_AEDAL) HSP 1 Score: 97.1 bits (240), Expect = 8.210e-21 Identity = 58/135 (42.96%), Postives = 80/135 (59.26%), Query Frame = 1
Query: 1 LVGYSDANLAGCLDSGRSTTGGLFLLAGGVAAFSSRLQDSAARSAMESEYKALFDAAQKEEQLRTLLAHLGLELTAPTVIHEDNTAVLAVPMAAGHTRQSRHIRTRYHFTRELVAAGVIAMEQVSTAGQLAYGLT 405
LVGYSDA+ AG RS +G +F + G ++SSR Q A S ME+EY AL +A+ + LR+LL L E PTV+ EDN + L H ++++HI TRYH+TREL A+GVI + + +A LT
Sbjct: 341 LVGYSDADWAGDSSDRRSCSGYVFRIGGATVSWSSRKQSCVATSTMEAEYVALSEASHEVVWLRSLLKELNEEQVKPTVVFEDNRSCLDFVALDQHKKRTKHIDTRYHYTRELSASGVIELRYCPSEEMVADVLT 475
BLAST of mRNA_P-wetherbeei_contig18066.1.1 vs. uniprot
Match: UPI001C9BC1AB (secreted RxLR effector protein 161-like n=1 Tax=Venturia canescens TaxID=32260 RepID=UPI001C9BC1AB) HSP 1 Score: 94.0 bits (232), Expect = 9.240e-21 Identity = 56/135 (41.48%), Postives = 79/135 (58.52%), Query Frame = 1
Query: 1 LVGYSDANLAGCLDSGRSTTGGLFLLAGGVAAFSSRLQDSAARSAMESEYKALFDAAQKEEQLRTLLAHLGLELTAPTVIHEDNTAVLAVPMAAGHTRQSRHIRTRYHFTRELVAAGVIAMEQVSTAGQLAYGLT 405
YSDA+ AG +D+ RSTTG + L+AGG +SS Q +RS E+EY A DA+Q+ LR LL L ++L PT +H DN + + + H ++++HI +YH+ RE V G I + V T QLA LT
Sbjct: 101 FTAYSDADFAGDVDTRRSTTGYITLMAGGPVIWSSHRQKCISRSTTEAEYVAASDASQEVTWLRILLQELCVDLKNPTPLHMDNQSAIRLTKNTEHHKKTKHIDIKYHYIRECVEHGAIKIIYVCTEEQLADILT 235
BLAST of mRNA_P-wetherbeei_contig18066.1.1 vs. uniprot
Match: A0A182HCW7_AEDAL (Uncharacterized protein n=2 Tax=Aedes albopictus TaxID=7160 RepID=A0A182HCW7_AEDAL) HSP 1 Score: 91.7 bits (226), Expect = 1.350e-20 Identity = 54/135 (40.00%), Postives = 76/135 (56.30%), Query Frame = 1
Query: 1 LVGYSDANLAGCLDSGRSTTGGLFLLAGGVAAFSSRLQDSAARSAMESEYKALFDAAQKEEQLRTLLAHLGLELTAPTVIHEDNTAVLAVPMAAGHTRQSRHIRTRYHFTRELVAAGVIAMEQVSTAGQLAYGLT 405
LVGY DA+ AG +S +G LF L G +++SR Q S S ME+EY AL +A Q+ LR LL L ++ T+IHEDN + R+S+HI TRYH+T+E A+G I + ++ +A LT
Sbjct: 17 LVGYCDADWAGDTSDRKSCSGYLFQLGGATVSWTSRKQTSVTTSTMEAEYVALSEATQQAIWLRRLLGELNVDQNCATIIHEDNKGCMDFVALDQQKRRSKHIDTRYHYTKERCASGEIELRYCASEDMIADVLT 151
BLAST of mRNA_P-wetherbeei_contig18066.1.1 vs. uniprot
Match: A0A6S7HIQ4_PARCT (Uncharacterized protein n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HIQ4_PARCT) HSP 1 Score: 93.6 bits (231), Expect = 2.440e-20 Identity = 57/135 (42.22%), Postives = 80/135 (59.26%), Query Frame = 1
Query: 1 LVGYSDANLAGCLDSGRSTTGGLFLLAGGVAAFSSRLQDSAARSAMESEYKALFDAAQKEEQLRTLLAHLGLELTAPTVIHEDNTAVLAVPMAAGHTRQSRHIRTRYHFTRELVAAGVIAMEQVSTAGQLAYGLT 405
L YSDA+ AG LD ST+G ++A G ++ S+ Q + A S E+EY AL A Q+ LR LL +G L TVI+EDN A +++ +++HI TRYHF RE + +GVIA+E V T+ +A LT
Sbjct: 136 LTVYSDADWAGDLDDRHSTSGNALIMASGAVSWLSKKQPTVAMSTAEAEYVALSFATQETIWLRQLLGDIGQPLAEATVIYEDNQAAISIAKNPVSHARTKHIDTRYHFIREELQSGVIALEYVPTSEMVADILT 270
BLAST of mRNA_P-wetherbeei_contig18066.1.1 vs. uniprot
Match: A0A226DUK4_FOLCA (Copia protein n=1 Tax=Folsomia candida TaxID=158441 RepID=A0A226DUK4_FOLCA) HSP 1 Score: 95.1 bits (235), Expect = 5.250e-20 Identity = 60/136 (44.12%), Postives = 85/136 (62.50%), Query Frame = 1
Query: 1 LVGYSDANLAGCLDSGRSTTGGLFLLAGGVAAFSSRLQDSAARSAMESEYKALFDAAQKEEQLRTLLAHLGLELTAPTVIHEDN-TAVLAVPMAAGHTRQSRHIRTRYHFTRELVAAGVIAMEQVSTAGQLAYGLT 405
L GY+DA+ A +STTG +F+L V ++SS+ Q + S+MESEY +L A++ LR L LG +PT+IH DN +A+ V H+R S+HI RYH+TRELV+ G +A+E V T+ Q+A GLT
Sbjct: 1199 LRGYTDADYASDKMDRKSTTGFVFMLNDSVISWSSQKQPIVSMSSMESEYISLASGAREAVWLRRFLEELGFPQESPTIIHVDNQSAIKLVKNPEMHSR-SKHIDVRYHYTRELVSTGQLAIEYVHTSEQIADGLT 1333
BLAST of mRNA_P-wetherbeei_contig18066.1.1 vs. uniprot
Match: A0A182HA04_AEDAL (Uncharacterized protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182HA04_AEDAL) HSP 1 Score: 92.0 bits (227), Expect = 7.460e-20 Identity = 58/135 (42.96%), Postives = 79/135 (58.52%), Query Frame = 1
Query: 1 LVGYSDANLAGCLDSGRSTTGGLFLLAGGVAAFSSRLQDSAARSAMESEYKALFDAAQKEEQLRTLLAHLGLELTAPTVIHEDNTAVLAVPMAAGHTRQSRHIRTRYHFTRELVAAGVIAMEQVSTAGQLAYGLT 405
LVGY+DA+ AG L S +STTG +F+ AGG +++SRLQD S+MESEY AL +A+Q+ L L G P + EDN + + + T++SRHI TR F +EL AGV+ + ST A LT
Sbjct: 121 LVGYADADWAGDLKSRKSTTGTVFMYAGGAISWTSRLQDFVTLSSMESEYVALSEASQEAVWLLKLFEDFGEPSFKPVTLWEDNQSCIKFVSSERTTKRSRHIETRQCFVKELCDAGVLKLLYCSTEEMAADLLT 255
BLAST of mRNA_P-wetherbeei_contig18066.1.1 vs. uniprot
Match: A0A1X7SEB0_AMPQE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7SEB0_AMPQE) HSP 1 Score: 92.0 bits (227), Expect = 1.210e-19 Identity = 52/131 (39.69%), Postives = 76/131 (58.02%), Query Frame = 1
Query: 1 LVGYSDANLAGCLDSGRSTTGGLFLLAGGVAAFSSRLQDSAARSAMESEYKALFDAAQKEEQLRTLLAHLGLELTAPTVIHEDNTAVLAVPMAAGHTRQSRHIRTRYHFTRELVAAGVIAMEQVSTAGQLA 393
LVGYSDA+ AG LD ST+G LFLLAGG ++ S+ Q + + S E+EY +L A Q+ +R LL + APTVI EDN +A+ +++HI +YH+ RE + G +++E T +A
Sbjct: 151 LVGYSDADWAGDLDDRHSTSGNLFLLAGGAISWLSKKQPTVSLSTAEAEYVSLCSATQEAVWIRRLLHDINCSQGAPTVIKEDNQGTIAIARNPVSHSRTKHIEIKYHYVRETIMDGQVSLEYCPTEEMIA 281
BLAST of mRNA_P-wetherbeei_contig18066.1.1 vs. uniprot
Match: A0A8H8JJR7_9AGAM (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Ceratobasidium sp. AG-Ba TaxID=170446 RepID=A0A8H8JJR7_9AGAM) HSP 1 Score: 92.0 bits (227), Expect = 5.740e-19 Identity = 53/135 (39.26%), Postives = 81/135 (60.00%), Query Frame = 1
Query: 1 LVGYSDANLAGCLDSGRSTTGGLFLLAGGVAAFSSRLQDSAARSAMESEYKALFDAAQKEEQLRTLLAHLGLELTAPTVIHEDNTAVLAVPMAAGHTRQSRHIRTRYHFTRELVAAGVIAMEQVSTAGQLAYGLT 405
L GY DA+ AG S RSTTG F LAGG+ A+SSR Q + + S+ E+EY A AA++ +R ++ LGL PT + DN + +A+ + + ++HIR +YHF RE++A + ++ + T Q+A LT
Sbjct: 526 LQGYVDADYAGDKSSSRSTTGWAFFLAGGLIAYSSRKQPTISLSSTEAEYVATSSAARELIWIRQFISELGLLPEGPTTVFSDNQSSIALAKNPANHQNTKHIRVKYHFIREVIALRELDLKYIPTDDQVADVLT 660
BLAST of mRNA_P-wetherbeei_contig18066.1.1 vs. uniprot
Match: A0A8H8JF23_9AGAM (Copia-like polyprotein/retrotransposon n=1 Tax=Ceratobasidium sp. AG-Ba TaxID=170446 RepID=A0A8H8JF23_9AGAM) HSP 1 Score: 91.7 bits (226), Expect = 8.390e-19 Identity = 53/135 (39.26%), Postives = 81/135 (60.00%), Query Frame = 1
Query: 1 LVGYSDANLAGCLDSGRSTTGGLFLLAGGVAAFSSRLQDSAARSAMESEYKALFDAAQKEEQLRTLLAHLGLELTAPTVIHEDNTAVLAVPMAAGHTRQSRHIRTRYHFTRELVAAGVIAMEQVSTAGQLAYGLT 405
L GY DA+ AG S RSTTG F LAGG+ A+SSR Q + + S+ E+EY A AA++ +R ++ LGL PT + DN + +A+ + + ++HIR +YHF RE++A + ++ + T Q+A LT
Sbjct: 1269 LRGYVDADYAGDKSSSRSTTGWAFFLAGGLIAYSSRKQPTISLSSTEAEYVATSSAARELIWIRQFISELGLLPEGPTTVFSDNQSSIALAKNPANHQNTKHIRVKYHFIREVIALRELDLKYIPTNDQVADVLT 1403 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18066.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig18066.1.1 >prot_P-wetherbeei_contig18066.1.1 ID=prot_P-wetherbeei_contig18066.1.1|Name=mRNA_P-wetherbeei_contig18066.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=140bp LVGYSDANLAGCLDSGRSTTGGLFLLAGGVAAFSSRLQDSAARSAMESEYback to top mRNA from alignment at P-wetherbeei_contig18066:126..545- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig18066.1.1 ID=mRNA_P-wetherbeei_contig18066.1.1|Name=mRNA_P-wetherbeei_contig18066.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=420bp|location=Sequence derived from alignment at P-wetherbeei_contig18066:126..545- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig18066:126..545- >mRNA_P-wetherbeei_contig18066.1.1 ID=mRNA_P-wetherbeei_contig18066.1.1|Name=mRNA_P-wetherbeei_contig18066.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=420bp|location=Sequence derived from alignment at P-wetherbeei_contig18066:126..545- (Phaeothamnion wetherbeei SAG_119_79)back to top |