mRNA_P-wetherbeei_contig18043.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig18043.2.1 vs. uniprot
Match: UPI0019CBCD33 (DUF962 domain-containing protein n=1 Tax=Candidatus Parcubacteria bacterium TaxID=2762014 RepID=UPI0019CBCD33) HSP 1 Score: 221 bits (564), Expect = 4.050e-70 Identity = 111/171 (64.91%), Postives = 133/171 (77.78%), Query Frame = 2
Query: 179 VKTLEDQMSFYAAYHQDTRNKLTHFVGVPAIIVAILAVLAWARADLGGTQVSAAMAVTTLLLAYYLALDALLGLAMIAVFAGLLGAGESIAALPMREAAAWILPLFVGGWIVQLLGHVFEGRKPALADNLFQVFVAPIFLCAEVFFLLGYKPALHAAVQRRALQMRAEAGI 691
+KTLEDQMSFYAAYHQD RNK THFVGVP I+ +++ L W R +LGG ++SAA+ VT +L YYL LD LGLAM AVFA +L A E ++ + + W L LFVGGW +QL GHV+EGRKPALADNLFQ+FVAPIFL AE FF LGYKP LH AVQRRA++MRA+AG+
Sbjct: 1 MKTLEDQMSFYAAYHQDARNKATHFVGVPIIVFSLMIPLGWLRMELGGHEISAALLVTAILFVYYLVLDLPLGLAMGAVFAAMLWAAEPLSRAALGASVTWFLVLFVGGWALQLWGHVYEGRKPALADNLFQIFVAPIFLAAEAFFALGYKPKLHEAVQRRAMEMRAQAGV 171
BLAST of mRNA_P-wetherbeei_contig18043.2.1 vs. uniprot
Match: A0A536SVK9_9PROT (DUF962 domain-containing protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536SVK9_9PROT) HSP 1 Score: 209 bits (533), Expect = 1.330e-65 Identity = 102/167 (61.08%), Postives = 129/167 (77.25%), Query Frame = 2
Query: 179 VKTLEDQMSFYAAYHQDTRNKLTHFVGVPAIIVAILAVLAWARADLGGTQVSAAMAVTTLLLAYYLALDALLGLAMIAVFAGLLGAGESIAALPMREAAAWILPLFVGGWIVQLLGHVFEGRKPALADNLFQVFVAPIFLCAEVFFLLGYKPALHAAVQRRALQMRA 679
+K+LE+QM+ Y+AYHQD RN+ THF+GVP I++++ LAW R DL G +SA M + ++LAYY ALD +LG AM+ VF LL AGE IAAL W LF+GGWI+QL+GH+FEGR+PALADNLFQ+F+APIFLCAE FF LGYKP LHAAV+ RAL++RA
Sbjct: 1 MKSLEEQMAVYSAYHQDARNRATHFIGVPLIVLSLFIPLAWLRVDLAGVAISAGMVLGAIVLAYYFALDLVLGFAMLVVFVVLLWAGERIAALGSTTGWLWFTALFIGGWILQLVGHLFEGRRPALADNLFQIFIAPIFLCAEAFFALGYKPRLHAAVRERALRLRA 167
BLAST of mRNA_P-wetherbeei_contig18043.2.1 vs. uniprot
Match: A0A536XTC4_9PROT (DUF962 domain-containing protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536XTC4_9PROT) HSP 1 Score: 206 bits (524), Expect = 3.090e-64 Identity = 103/167 (61.68%), Postives = 126/167 (75.45%), Query Frame = 2
Query: 179 VKTLEDQMSFYAAYHQDTRNKLTHFVGVPAIIVAILAVLAWARADLGGTQVSAAMAVTTLLLAYYLALDALLGLAMIAVFAGLLGAGESIAALPMREAAAWILPLFVGGWIVQLLGHVFEGRKPALADNLFQVFVAPIFLCAEVFFLLGYKPALHAAVQRRALQMRA 679
+K+LE+Q++ YAAYH+D RNK THF+GVP I++A+ LAW R DLGGT VSA M + ++L YY LD G AM+AVFA LL AGE IA L W LF+GGWI+QL+GHV+EGR+PALADNL Q+F+APIFL AEVFF LGYKP LHAAVQ RA ++RA
Sbjct: 1 MKSLEEQLAIYAAYHRDGRNKATHFIGVPVIVLALFIPLAWLRFDLGGTAVSAGMVLAAIVLLYYFVLDIAFGFAMLAVFAALLWAGERIATLGAVAGWTWFAVLFIGGWILQLVGHVYEGRRPALADNLLQIFIAPIFLAAEVFFALGYKPQLHAAVQERAQRLRA 167
BLAST of mRNA_P-wetherbeei_contig18043.2.1 vs. uniprot
Match: A0A537BVN7_9PROT (DUF962 domain-containing protein n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537BVN7_9PROT) HSP 1 Score: 199 bits (505), Expect = 9.630e-61 Identity = 102/166 (61.45%), Postives = 123/166 (74.10%), Query Frame = 2
Query: 179 VKTLEDQMSFYAAYHQDTRNKLTHFVGVPAIIVAILAVLAWARADLGGTQVSAAMAVTTLLLAYYLALDALLGLAMIAVFAGLLGAGESIAALPMREAAAWILPLFVGGWIVQLLGHVFEGRKPALADNLFQVFVAPIFLCAEVFFLLGYKPALHAAVQRRALQMR 676
+KTLE+QM+FYAAYHQD RNK THF+GVPAI++++ LAW R +LGG +SAAM +L YY LD L L M+ + L+ AGE IA W LFVGGWI+QL+GHVFEGRKPALADNLFQ+FVAPIFLCAE+ F LGYKP LHA +Q+RAL+MR
Sbjct: 45 MKTLEEQMAFYAAYHQDARNKATHFIGVPAIMLSLFIPLAWLRLELGGVAISAAMLFAAAVLVYYFLLDVPLALVMLLITGILVLAGERIAGQGAARGWVWFGVLFVGGWILQLVGHVFEGRKPALADNLFQIFVAPIFLCAELAFALGYKPELHADMQQRALRMR 210
BLAST of mRNA_P-wetherbeei_contig18043.2.1 vs. uniprot
Match: A0A177QZ98_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium SCGC AG-212-J23 TaxID=1799662 RepID=A0A177QZ98_9PROT) HSP 1 Score: 196 bits (499), Expect = 1.850e-60 Identity = 107/162 (66.05%), Postives = 120/162 (74.07%), Query Frame = 2
Query: 200 MSFYAAYHQDTRNKLTHFVGVPAIIVAILAVLAWARADLGGTQVSAAMAVTTLLLAYYLALDALLGLAMIAVFAGLLGAGESIAALPMREAAAWILPLFVGGWIVQLLGHVFEGRKPALADNLFQVFVAPIFLCAEVFFLLGYKPALHAAVQRRALQMRAEA 685
MSFYAAYHQD RNK THFVGVP I+++++ L+W R D VSAAM VT LLAYYL LD LGLAM AV LL G++IA W LFVGGWI+QL+GHVFEGRKPAL NLFQ+FVAPIFLCAEVFF LGYKP LHAA+Q RAL+MRA A
Sbjct: 1 MSFYAAYHQDARNKATHFVGVPVIVLSLMIPLSWLRID----AVSAAMVVTAALLAYYLVLDLWLGLAMCAVMGALLWIGQAIADQGALAGWIWFAILFVGGWILQLVGHVFEGRKPALTANLFQIFVAPIFLCAEVFFALGYKPRLHAAMQERALRMRAAA 158
BLAST of mRNA_P-wetherbeei_contig18043.2.1 vs. uniprot
Match: A0A537BQJ6_9PROT (DUF962 domain-containing protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537BQJ6_9PROT) HSP 1 Score: 192 bits (488), Expect = 9.750e-59 Identity = 102/168 (60.71%), Postives = 120/168 (71.43%), Query Frame = 2
Query: 179 VKTLEDQMSFYAAYHQDTRNKLTHFVGVPAIIVAILAVLAWARADLGGTQVSAAMAVTTLLLAYYLALDALLGLAMIAVFAGLLGAGESIAALPMREAAAWIL--PLFVGGWIVQLLGHVFEGRKPALADNLFQVFVAPIFLCAEVFFLLGYKPALHAAVQRRALQMR 676
+KTLE QM FYAAYHQD RNK THF+GVPAI++++ LAW R +LG ++AAM +L YY LD LGLAM+ V A L+ G+ IA W LFVGGWI+QL+GH FEGRKPALADNL Q+FVAPIFLCAE+FF LGYKP LH AVQ RAL+MR
Sbjct: 1 MKTLEQQMGFYAAYHQDARNKATHFIGVPAIMLSLFIPLAWLRIELGAAPITAAMLFAAAVLVYYFMLDVPLGLAMLVVSALLVWLGQLIADQGALRGWGWTWFGVLFVGGWILQLVGHGFEGRKPALADNLLQIFVAPIFLCAEIFFALGYKPELHCAVQERALRMR 168
BLAST of mRNA_P-wetherbeei_contig18043.2.1 vs. uniprot
Match: A0A537AA70_9PROT (DUF962 domain-containing protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537AA70_9PROT) HSP 1 Score: 187 bits (475), Expect = 7.480e-57 Identity = 101/169 (59.76%), Postives = 119/169 (70.41%), Query Frame = 2
Query: 179 VKTLEDQMSFYAAYHQDTRNKLTHFVGVPAIIVAILAVLAWARADLGGTQVSAAMAVTTLLLAYYLALDALLGLAMIAVFAGLLGAGESIAALPMREAAAWILPLFVGGWIVQLLGHVFEGRKPALADNLFQVFVAPIFLCAEVFFLLGYKPALHAAVQRRALQMRAEA 685
+++LE+QM+ YAAYHQD RNK THF+GVP I++++ LAW R D VSAAM L YYL LD LGLAM+ V A L GE IA W LFVGGWI+QL+GHV+EGR+PALADNLFQ+FVAPIFL AE FF LGYKP L AVQRRA++MRA A
Sbjct: 1 MRSLEEQMATYAAYHQDARNKATHFIGVPVIVLSLFIPLAWLRID----AVSAAMIAAAALAVYYLVLDLALGLAMLVVLAVLAWLGERIAMQGAVAGWTWFGVLFVGGWILQLVGHVYEGRRPALADNLFQIFVAPIFLAAEAFFALGYKPGLQEAVQRRAMKMRASA 165
BLAST of mRNA_P-wetherbeei_contig18043.2.1 vs. uniprot
Match: A0A1F4EVF8_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14 TaxID=1797501 RepID=A0A1F4EVF8_9PROT) HSP 1 Score: 186 bits (471), Expect = 3.900e-56 Identity = 96/159 (60.38%), Postives = 115/159 (72.33%), Query Frame = 2
Query: 179 VKTLEDQMSFYAAYHQDTRNKLTHFVGVPAIIVAILAVLAWARADLGGTQVSAAMAVTTLLLAYYLALDALLGLAMIAVFAGLLGAGESIAALPMREAAAWILPLFVGGWIVQLLGHVFEGRKPALADNLFQVFVAPIFLCAEVFFLLGYKPALHAAVQ 655
+K LE+QM+FYAAYHQD RNK THFVGVP I++AIL L+W R + G V+AAM + +LAYY LD L LAM+ V L+ A E+IAAL W LFVGGWI+QL+GHVFEGR+PAL DNLFQ+FVAP+FL AEVFF LGYKP L +Q
Sbjct: 1 MKMLEEQMAFYAAYHQDARNKATHFVGVPLIMLAILIPLSWLRLEAAGITVTAAMLLPAAVLAYYFMLDLPLALAMLIVIGALIWAAETIAALGAAPGWGWFGALFVGGWILQLIGHVFEGRRPALVDNLFQIFVAPLFLAAEVFFALGYKPELRKRIQ 159
BLAST of mRNA_P-wetherbeei_contig18043.2.1 vs. uniprot
Match: A0A1F4CR92_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_19 TaxID=1797504 RepID=A0A1F4CR92_9PROT) HSP 1 Score: 168 bits (426), Expect = 3.280e-49 Identity = 91/166 (54.82%), Postives = 106/166 (63.86%), Query Frame = 2
Query: 179 VKTLEDQMSFYAAYHQDTRNKLTHFVGVPAIIVAILAVLAWARADLGGTQVSAAMAVTTLLLAYYLALDALLGLAMIAVFAGLLGAGESIAALPMREAAAWILPLFVGGWIVQLLGHVFEGRKPALADNLFQVFVAPIFLCAEVFFLLGYKPALHAAVQRRALQMR 676
+KTLEDQM+FYAAYHQD RNK +HF+GVP I++++ LAW R D+GG + G +AAL + AW LFVGGWIVQL+GHVFEGRKPALADNLFQ+FVAPIFL AEVFF GYKP LH AVQ+RALQMR
Sbjct: 1 MKTLEDQMAFYAAYHQDGRNKASHFIGVPMIMLSLFIPLAWIRLDVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVWLGHQVAALGAAQGWAWFGVLFVGGWIVQLVGHVFEGRKPALADNLFQIFVAPIFLAAEVFFAFGYKPRLHEAVQKRALQMR 166
BLAST of mRNA_P-wetherbeei_contig18043.2.1 vs. uniprot
Match: A0A836X2Q1_9PROT (DUF962 domain-containing protein n=1 Tax=Sneathiellales bacterium TaxID=2528251 RepID=A0A836X2Q1_9PROT) HSP 1 Score: 167 bits (424), Expect = 6.790e-49 Identity = 88/161 (54.66%), Postives = 112/161 (69.57%), Query Frame = 2
Query: 179 VKTLEDQMSFYAAYHQDTRNKLTHFVGVPAIIVAILAVLAWARADLGGTQVSAAMAVTTLLLAYYLALDALLGLAMIAVFAGLLGAGESIAALPMREAAAWILPLFVGGWIVQLLGHVFEGRKPALADNLFQVFVAPIFLCAEVFFLLGYKPALHAAVQRR 661
+KT+ +QM+FYAAYH++ RN+ THF+GVPAI AIL +AW LGG QVS AMA +LAYYL LD L+G+ + +F +L E +A L + FVGGWI+QL+GHVFE R+PALADNLFQVFVAP+FL AEV+ LG+K L A V+ R
Sbjct: 3 MKTMAEQMAFYAAYHRNARNRATHFIGVPAIAFAILIPMAWVAVSLGGGQVSLAMAFVFAVLAYYLRLDFLIGITAVIIFVPMLILAEWVAGLTLTTGLITFAVSFVGGWILQLIGHVFERRRPALADNLFQVFVAPLFLIAEVYLALGFKKTLAAEVKIR 163 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18043.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig18043.2.1 >prot_P-wetherbeei_contig18043.2.1 ID=prot_P-wetherbeei_contig18043.2.1|Name=mRNA_P-wetherbeei_contig18043.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=171bp MSFYAAYHQDTRNKLTHFVGVPAIIVAILAVLAWARADLGGTQVSAAMAVback to top mRNA from alignment at P-wetherbeei_contig18043:235..946- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig18043.2.1 ID=mRNA_P-wetherbeei_contig18043.2.1|Name=mRNA_P-wetherbeei_contig18043.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=712bp|location=Sequence derived from alignment at P-wetherbeei_contig18043:235..946- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig18043:235..946- >mRNA_P-wetherbeei_contig18043.2.1 ID=mRNA_P-wetherbeei_contig18043.2.1|Name=mRNA_P-wetherbeei_contig18043.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=513bp|location=Sequence derived from alignment at P-wetherbeei_contig18043:235..946- (Phaeothamnion wetherbeei SAG_119_79)back to top |