mRNA_P-wetherbeei_contig18041.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig18041.1.1 vs. uniprot
Match: D8LTE3_ECTSI (Shikimate dehydrogenase (NADP(+)) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTE3_ECTSI) HSP 1 Score: 346 bits (888), Expect = 4.720e-112 Identity = 171/258 (66.28%), Postives = 198/258 (76.74%), Query Frame = 1
Query: 1 SLTFPDMSAQAALLPQLCDGADAMELRVDLLAERDDPIAVLRQLQLLRASTARRPVIFTVRSKGQCGAFPDDADAIFELARQAIGGWGLRGGVEYLDIEANWPMEHRAALIAEARRHYPATALIGSYHVMGRATSEERAKELFLECYHNGAVDAVKVVTTAMVPEDGFRVHHAAQALRLPVPYIGLCLTATGQLSRVLNRRFTPVTHGRLPAMAAPGQMTAEHIMKLRKELAIVPPRRFFLFGSPIAASPRPDMQPAG 774
SLTF D S LLP L +G DAMELRVDLLA+ +DP VLRQL +LR T PV+FT+RSKGQCGAFPDD + IF LAR WGLR G E +D+EANWPM +R LI EA +YP L+GSYHV+GR T+EE+AKELF+ECYH+GAVD VKVVTTA PED RVH AA++L LPVPYIGLCLT TG+LSRVLN+RFTPVTH LP +AAPGQM+++ IM R EL + PPR FFLFGSPI+ASP PDM AG
Sbjct: 186 SLTFEDFSLHTDLLPTLTEGVDAMELRVDLLADNEDPYTVLRQLSILRRHTGYLPVVFTIRSKGQCGAFPDDPEKIFRLAR-----WGLRAGCEVMDVEANWPMSYREGLIREAGENYPGAVLVGSYHVVGRKTTEEQAKELFMECYHDGAVDGVKVVTTAFEPEDSIRVHAAAKSLALPVPYIGLCLTETGKLSRVLNKRFTPVTHENLPFVAAPGQMSSKEIMHHRAELGLCPPRSFFLFGSPISASPSPDMHNAG 438
BLAST of mRNA_P-wetherbeei_contig18041.1.1 vs. uniprot
Match: A0A836CDF8_9STRA (Type I 3-dehydroquinase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDF8_9STRA) HSP 1 Score: 289 bits (740), Expect = 1.330e-92 Identity = 146/235 (62.13%), Postives = 185/235 (78.72%), Query Frame = 1
Query: 70 MELRVDLLAERDDPIAVLRQLQLLRASTARRPVIFTVRSKGQCGAFPDDADAIFELARQAIGGWGLRGGVEYLDIEANWPMEHRAALIAEARRHYPATALIGSYHVMGRATSEERAKELFLECYHNGAVDAVKVVTTAMVPEDGFRVHHAAQALRLPVPYIGLCLTATGQLSRVLNRRFTPVTHGRLPAMAAPGQMTAEHIMKLRKELAIVPPRRFFLFGSPIAASPRPDMQPAG 774
MEL VDLL+++ P AVL QLQLLR T R PVIFT+RSKGQCGAF DD A+F+L + WGLRGGVEYLDIEANW A +I A+ HYPAT L+GSYHV+G+ T+E +A++L+ CYH G VDAVKVVTTA+ +D +RVH AA++L LPVP+IGLCLT TG LSRVLN RFTPVTH +LP++AAPGQ+T+E IM+LR++L ++ P++F+LFG+PI+ASP P M +G
Sbjct: 1 MELHVDLLSDQR-PHAVLAQLQLLRRHTGRLPVIFTIRSKGQCGAFADDPVAMFDLLK-----WGLRGGVEYLDIEANWG----ARMIGLAKAHYPATVLMGSYHVVGKKTTEAQARKLYKRCYHRGQVDAVKVVTTAIEHQDSYRVHQAAESLALPVPHIGLCLTPTGSLSRVLNMRFTPVTHAKLPSVAAPGQLTSEAIMRLRQDLGMLQPKQFYLFGAPISASPSPAMHNSG 225
BLAST of mRNA_P-wetherbeei_contig18041.1.1 vs. uniprot
Match: A0A7S2V1R3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1R3_9STRA) HSP 1 Score: 279 bits (713), Expect = 1.140e-85 Identity = 138/254 (54.33%), Postives = 185/254 (72.83%), Query Frame = 1
Query: 1 SLTFPDMSAQAALLPQLCDGADAMELRVDLLAERDDPIAVLRQLQLLRASTARRPVIFTVRSKGQCGAFPDDADAIFELARQAIGGWGLRGGVEYLDIEANWPMEHRAALIAEARRHYPATALIGSYHVMGRATSEERAKELFLECYHNGAVDAVKVVTTAMVPEDGFRVHHAAQALRLPVPYIGLCLTATGQLSRVLNRRFTPVTHGRLPAMAAPGQMTAEHIMKLRKELAIVPPRRFFLFGSPIAASPRPDM 762
SLTFPD++ +LP++ +G+DA+ELRVD+L RDDP+ VL Q+++LR T + PVI+TVR+ GQCG +PD+ +F L GLRGG+EYLDIEA W E+RA L+ ++ YP+T ++ S+HV+G+++S E ++LF EC +G VD VKVV TA+ +D +RVH AQ++ LPVPYIGLCLT GQLSRVLN RFTPVTH LP MAAPGQ++ + IM R +L I PP+ FFL G+PI+ASP P M
Sbjct: 220 SLTFPDITDSVDILPEVVEGSDAVELRVDMLQGRDDPLEVLYQMRVLRHHT-QLPVIYTVRTLGQCGTYPDEPGRVFPLLHS-----GLRGGLEYLDIEACWQEEYRAPLLEASKADYPSTVVLSSHHVVGKSSSTEETQQLFEECLMDGRVDGVKVVLTAVESDDSWRVHSVAQSMNLPVPYIGLCLTPKGQLSRVLNPRFTPVTHPSLPVMAAPGQLSVKEIMDFRAKLGITPPKSFFLLGTPISASPSPAM 467
BLAST of mRNA_P-wetherbeei_contig18041.1.1 vs. uniprot
Match: W7TUF9_9STRA (Pentafunctional arom polypeptide n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TUF9_9STRA) HSP 1 Score: 245 bits (626), Expect = 1.090e-72 Identity = 141/260 (54.23%), Postives = 175/260 (67.31%), Query Frame = 1
Query: 1 SLTFPDMSAQAALLPQLCDGADAMELRVDLLAERDDPIAVLRQLQLLRASTARRPVIFTVRSKGQCGAFPDDADAIFELARQAIGGWGLRGGVEYLDIEANWPMEHRAALIAEARRHYPATA-LIGSYHVMGRATSEERAKELFLECYHNGAVDAVKVVTTAMVPEDGFRVHHAAQALRLP--VPYIGLCLTATGQLSRVLNRRFTPVTHGRLPAMAAPGQMTAEHIMKLRKELAIVPPRRFFLFGSPIAASPRPDMQPA 771
SLTFPD+ LLP L G DA+ELRVDLL ++ P +LRQ+ +L+++T R PVIFTVRS+ QCGAFP++ AIF+L GLR GVE LD+EA W + R +L+ EA R Y T L+GSYHV+GR + A E+F ECYH+G VDAVKVV TA D +RVH A A LP +P + LCL G+LSRVLN R+TPVT LP +AAPGQ+TAE IM+LR++L +VP F L GSPIA SP P M A
Sbjct: 246 SLTFPDVRECLPLLPGLERGVDALELRVDLLRDKT-PWDILRQVAILKSAT-RLPVIFTVRSQDQCGAFPNEPAAIFDLLAL-----GLRAGVEVLDVEACWDRKARESLLTEAWRGYRGTTRLLGSYHVVGRRVPDREALEIFQECYHDGRVDAVKVVLTAHSVRDTYRVHELAAAAGLPPSLPVVALCLGEVGKLSRVLNSRYTPVTSKLLPYVAAPGQLTAEEIMRLRQDLGMVPTSSFCLLGSPIAQSPSPAMHTA 498
BLAST of mRNA_P-wetherbeei_contig18041.1.1 vs. uniprot
Match: A0A5D6XVW7_9STRA (3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XVW7_9STRA) HSP 1 Score: 223 bits (568), Expect = 6.840e-63 Identity = 129/262 (49.24%), Postives = 164/262 (62.60%), Query Frame = 1
Query: 1 SLTFPDMSAQAALLPQLCDGADAMELRVDLLAERDDPIAVLRQLQLLRASTARRPVIFTVRSKGQCGAFPDDAD-AIFELARQAIGGWGLRGGVEYLDIEANWPMEHRAALIAEARRHYPATALIGSYHVMGRATSEERAKELFLECYHNGAVDAVKVVTTAMVPEDGFRVHHAAQ----ALRLPVPYIGLCLTATGQLSRVLNRRFTPVTHGRLPAMAAPGQMTAEHIMKLRKELAIVPPRRFFLFGSPIAASPRPDMQPA 771
SLTFPDMSA A++ ++ G DA+ELRVDLLA DD AV Q+ LLRA + P+IFTVRS+GQ GAFPDD + +F L G+R G E++D+E W RA L+A RR +A+I S+H + + TSE K +F EC+ G V+ VKVV A P+D VH A A R VP + LC T G+L+RVLNR TPVTH LPA AAPGQ++ I+ LR++L ++P R FFLFGSPI SP P M A
Sbjct: 1261 SLTFPDMSAARAIMAEISAGVDALELRVDLLAAFDDAAAVAAQVALLRALSPL-PIIFTVRSRGQGGAFPDDDEPGMFRLLAL-----GVRLGCEFVDVETCWSRAARAQLLAARRR----SAVISSFHAVQQPTSEADVKAIFRECHEQGRVEVVKVVVKAFAPQDALMVHRLATEFAAAWRHEVPIVALCTTDAGKLTRVLNRVLTPVTHPLLPAAAAPGQLSVAEILSLRQQLGLLPAREFFLFGSPIRQSPSPAMHNA 1512
BLAST of mRNA_P-wetherbeei_contig18041.1.1 vs. uniprot
Match: W2FV38_PHYPR (3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Phytophthora parasitica TaxID=4792 RepID=W2FV38_PHYPR) HSP 1 Score: 213 bits (542), Expect = 9.090e-60 Identity = 125/265 (47.17%), Postives = 160/265 (60.38%), Query Frame = 1
Query: 1 SLTFPDMSAQAALLPQLCDGADAMELRVDLLAERDDPIAVLRQLQLLRASTARRPVIFTVRSKGQCGAFPDDAD---AIFELARQAIGGWGLRGGVEYLDIEANWPMEHRAALIAEARRHYPATALIGSYHVMGRATSEERAKELFLECYHNGAVDAVKVVTTAMVPEDGFRVHHAAQ----ALRLPVPYIGLCLTATGQLSRVLNRRFTPVTHGRLPAMAAPGQMTAEHIMKLRKELAIVPPRRFFLFGSPIAASPRPDMQPAG 774
SLTFPD++ +L+ + GADA+ELRVDLL +D V Q+ LLR S + P+IFTVRSKGQ GAFPD + +FEL + G+R G E++D+E W + R L+ R +A+I S+H + + TSE K +F ECY G V VKVV A P D V A+ A + +P I LC T G+L+RVLNR TPVTH LPA AAPGQ++ E IM LRK+L ++P R FFLFGSPI SP P M AG
Sbjct: 443 SLTFPDVNDARSLISDISKGADALELRVDLLKNPEDTKFVAAQVALLR-SLSTLPIIFTVRSKGQGGAFPDGEEHEQKMFELLQL-----GVRLGCEFIDMETCWSRKAREQLLTHRHR----SAIISSFHAVQKPTSEAETKAIFRECYSQGRVQIVKVVVKAYSPADALMVDRVAKDFATAWQQQMPIISLCTTEAGKLTRVLNRTLTPVTHPMLPAAAAPGQLSVEEIMTLRKQLGLLPAREFFLFGSPIQKSPSPAMHNAG 697
BLAST of mRNA_P-wetherbeei_contig18041.1.1 vs. uniprot
Match: M4BYJ7_HYAAE (Pentafunctional AROM polypeptide n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BYJ7_HYAAE) HSP 1 Score: 212 bits (540), Expect = 3.820e-59 Identity = 126/265 (47.55%), Postives = 163/265 (61.51%), Query Frame = 1
Query: 1 SLTFPDMSAQAALLPQLCDGADAMELRVDLLAERDDPIAVLRQLQLLRASTARRPVIFTVRSKGQCGAFPDDAD---AIFELARQAIGGWGLRGGVEYLDIEANWPMEHRAALIAEARRHYPATALIGSYHVMGRATSEERAKELFLECYHNGAVDAVKVVTTAMVPEDGFRVHHAAQ----ALRLPVPYIGLCLTATGQLSRVLNRRFTPVTHGRLPAMAAPGQMTAEHIMKLRKELAIVPPRRFFLFGSPIAASPRPDMQPAG 774
SLTFPD++ ++ + DA+ELRVDLL +D V Q+ LLR S + P+IFTVRSKGQ GAFPD + +FEL R G+R G E++D+E W + R L+A R +A+I S+H + + TSE + K +F ECY G V VKVV A PED V H A+ A + +P I LC T TG+L+RVLNR TPVTH LPA+AAPGQ++ E IM LRK+L ++P R F+LFGSPI SP P M AG
Sbjct: 1026 SLTFPDVNDARPIIDDISKDVDALELRVDLLQFPEDVKFVAAQVALLR-SLSTLPIIFTVRSKGQGGAFPDGEEHEQKMFELLRL-----GVRLGCEFVDMETCWSPKAREQLMAGRHR----SAIISSFHAVQKPTSEAKIKTIFRECYSEGKVQIVKVVVKAYSPEDALTVSHVAKHFAHAWQQQMPIISLCTTDTGKLTRVLNRTLTPVTHPLLPAVAAPGQLSVEEIMILRKQLGLLPAREFYLFGSPIQNSPSPAMHNAG 1280
BLAST of mRNA_P-wetherbeei_contig18041.1.1 vs. uniprot
Match: H3GHV1_PHYRM (Pentafunctional AROM polypeptide n=20 Tax=Phytophthora TaxID=4783 RepID=H3GHV1_PHYRM) HSP 1 Score: 209 bits (532), Expect = 4.510e-58 Identity = 125/265 (47.17%), Postives = 160/265 (60.38%), Query Frame = 1
Query: 1 SLTFPDMSAQAALLPQLCDGADAMELRVDLLAERDDPIAVLRQLQLLRASTARRPVIFTVRSKGQCGAFPDDAD---AIFELARQAIGGWGLRGGVEYLDIEANWPMEHRAALIAEARRHYPATALIGSYHVMGRATSEERAKELFLECYHNGAVDAVKVVTTAMVPEDGFRVHHAAQ----ALRLPVPYIGLCLTATGQLSRVLNRRFTPVTHGRLPAMAAPGQMTAEHIMKLRKELAIVPPRRFFLFGSPIAASPRPDMQPAG 774
SLTFPDM+ ++ + GADA+ELRVDLL D V Q+ LLR ++ P+IFTVRSKGQ GAFPD + +FEL + G+R G E++D+E W + R L+A R +A+I S+H + + TSE K +F ECY G V VKVV A P+D V A+ A + +P I LC T G+L+RVLNR TPVTH LPA AAPGQ++ E IM LRK+L ++P R FFLFGSPI SP P M AG
Sbjct: 1022 SLTFPDMNDARPIISDISKGADALELRVDLLKYPQDTKFVAAQVALLRTLSSL-PIIFTVRSKGQGGAFPDGEENELKMFELLQL-----GVRLGCEFVDMETCWSRKAREHLLAHRYR----SAIISSFHAVQKPTSEAETKLIFRECYSQGRVQIVKVVVKAYSPQDALMVDRVAKDFANAWQQQMPIISLCTTEAGKLTRVLNRTLTPVTHPLLPAAAAPGQLSIEEIMILRKQLGLLPAREFFLFGSPIQKSPSPAMHNAG 1276
BLAST of mRNA_P-wetherbeei_contig18041.1.1 vs. uniprot
Match: K3X4S6_GLOUD (Pentafunctional AROM polypeptide n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X4S6_GLOUD) HSP 1 Score: 204 bits (519), Expect = 2.490e-56 Identity = 119/262 (45.42%), Postives = 158/262 (60.31%), Query Frame = 1
Query: 1 SLTFPDMSAQAALLPQLCDGADAMELRVDLLAERDDPIAVLRQLQLLRASTARRPVIFTVRSKGQCGAFPDDADA-IFELARQAIGGWGLRGGVEYLDIEANWPMEHRAALIAEARRHYPATALIGSYHVMGRATSEERAKELFLECYHNGAVDAVKVVTTAMVPEDGFRVHHAAQAL----RLPVPYIGLCLTATGQLSRVLNRRFTPVTHGRLPAMAAPGQMTAEHIMKLRKELAIVPPRRFFLFGSPIAASPRPDMQPA 771
SLTFPD++ L+ + G DA+ELRVDLL D + Q+ LLR S + P+IFTVRS+ Q GAFPDD +A +F+L A+ R G E++D+E W + + L+A RR +A+I S+H + TSE +AK +F ECYH G V VKVV A P+D V A+ + +P I LC G+++RVLNR TPVTH LPA AAPGQ++ I+ LRK+L ++P R FFLFGSPI SP P M A
Sbjct: 1023 SLTFPDVNDARVLIKDITKGVDALELRVDLLKSYTDINFIASQVALLR-SLSPLPIIFTVRSRAQGGAFPDDDEATMFQLLHLAV-----RLGCEFVDVETCWSRKAQDQLLASRRR----SAIISSFHAIQEPTSEAQAKAIFRECYHQGKVQVVKVVLKAFEPQDALMVDRVAKDFAKVWQHKMPIISLCTMDAGKMARVLNRVLTPVTHPLLPAAAAPGQLSVVEILTLRKQLGLLPGREFFLFGSPIQKSPSPSMHNA 1274
BLAST of mRNA_P-wetherbeei_contig18041.1.1 vs. uniprot
Match: A0A3M6VQ13_9STRA (Pentafunctional AROM polypeptide n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VQ13_9STRA) HSP 1 Score: 204 bits (518), Expect = 3.390e-56 Identity = 120/264 (45.45%), Postives = 157/264 (59.47%), Query Frame = 1
Query: 1 SLTFPDMSAQAALLPQLCDGADAMELRVDLLAERDDPIAVLRQLQLLRASTARRPVIFTVRSKGQCGAFPDDAD---AIFELARQAIGGWGLRGGVEYLDIEANWPMEHRAALIAEARRHYPATALIGSYHVMGRATSEERAKELFLECYHNGAVDAVKVVTTAMVPEDGFRVHHAAQALR---LPVPYIGLCLTATGQLSRVLNRRFTPVTHGRLPAMAAPGQMTAEHIMKLRKELAIVPPRRFFLFGSPIAASPRPDMQPAG 774
SLTFPD++ ++ + G DA+ELRVDLL +D V Q+ LLRA + PVIFTVRSK Q GAFPD + +FEL + G+R G E++D+E W + R L+A H+ +A+I S+H + + TSE + +F ECY G V VKVV A P+D + A+ +P I LC T G+L+RVLNR TPVTH LP AAPGQ++ E IM LRK+L ++P R FFLFGSPI SP P M AG
Sbjct: 1024 SLTFPDVNDARPIINDISKGVDALELRVDLLKFPEDTKFVTAQVALLRALSTL-PVIFTVRSKNQGGAFPDGEEHTQKMFELLQL-----GVRLGCEFVDMEMGWSRKAREHLMA----HHHRSAIISSFHAVQKPTSETETRAIFRECYSQGKVQIVKVVVKAYSPQDALMIDRVAKDFANAWQQMPIISLCTTEAGKLTRVLNRTLTPVTHPLLPVAAAPGQLSVEEIMTLRKQLGLLPVREFFLFGSPIQKSPSPAMHNAG 1277 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18041.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig18041.1.1 >prot_P-wetherbeei_contig18041.1.1 ID=prot_P-wetherbeei_contig18041.1.1|Name=mRNA_P-wetherbeei_contig18041.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=252bp MSAQAALLPQLCDGADAMELRVDLLAERDDPIAVLRQLQLLRASTARRPVback to top mRNA from alignment at P-wetherbeei_contig18041:3..1383+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig18041.1.1 ID=mRNA_P-wetherbeei_contig18041.1.1|Name=mRNA_P-wetherbeei_contig18041.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1381bp|location=Sequence derived from alignment at P-wetherbeei_contig18041:3..1383+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig18041:3..1383+ >mRNA_P-wetherbeei_contig18041.1.1 ID=mRNA_P-wetherbeei_contig18041.1.1|Name=mRNA_P-wetherbeei_contig18041.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=756bp|location=Sequence derived from alignment at P-wetherbeei_contig18041:3..1383+ (Phaeothamnion wetherbeei SAG_119_79)back to top |