mRNA_P-wetherbeei_contig18032.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig18032.1.1
Unique NamemRNA_P-wetherbeei_contig18032.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig18032.1.1 vs. uniprot
Match: A0A353QX76_9CYAN (SpoIID domain-containing protein n=1 Tax=Cyanobacteria bacterium UBA9971 TaxID=2055776 RepID=A0A353QX76_9CYAN)

HSP 1 Score: 56.2 bits (134), Expect = 1.000e-7
Identity = 29/56 (51.79%), Postives = 38/56 (67.86%), Query Frame = 1
Query:   10 GRWEAYRGQLEATARPAPQVAFSLVNLLPLDAYLAGVVPSEVPNTFPEEALKAMAV 177
            G+  AYRG +E T  P      S++N+LPL+ YL GVVP+E+P +F  EALKA AV
Sbjct:  129 GKQAAYRGIIEITKTPKKTNKLSVINVLPLEEYLRGVVPNELPVSFGLEALKAQAV 184          
BLAST of mRNA_P-wetherbeei_contig18032.1.1 vs. uniprot
Match: K2EY43_9BACT (SpoIID/LytB protein n=1 Tax=uncultured bacterium TaxID=77133 RepID=K2EY43_9BACT)

HSP 1 Score: 55.8 bits (133), Expect = 1.370e-7
Identity = 29/56 (51.79%), Postives = 36/56 (64.29%), Query Frame = 1
Query:   10 GRWEAYRGQLEATARPAPQVAFSLVNLLPLDAYLAGVVPSEVPNTFPEEALKAMAV 177
            G+   YRG LE    P  +  FS+VN+LPL+ YL GVVP+E+P  F  EALKA  V
Sbjct:  133 GKPALYRGDLEIVQSPTKKGTFSVVNILPLEEYLKGVVPNELPVRFGLEALKAQTV 188          
BLAST of mRNA_P-wetherbeei_contig18032.1.1 vs. uniprot
Match: A0A7X8XL26_9BURK (SpoIID/LytB domain-containing protein n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X8XL26_9BURK)

HSP 1 Score: 55.1 bits (131), Expect = 2.580e-7
Identity = 32/59 (54.24%), Postives = 40/59 (67.80%), Query Frame = 1
Query:    1 DGTGRWEAYRGQLEATARPAPQVAFSLVNLLPLDAYLAGVVPSEVPNTFPEEALKAMAV 177
            +GT RW A+RG L    RP    +  LVN LPL+ YL GVVP+E+P  FP +AL+AMAV
Sbjct:  349 NGTYRWSAWRGDLHL--RPDGG-SIQLVNHLPLEEYLRGVVPNEMPAWFPPQALRAMAV 404          
BLAST of mRNA_P-wetherbeei_contig18032.1.1 vs. uniprot
Match: A0A1I6EBP0_9FIRM (Stage II sporulation protein D n=1 Tax=Desulfoscipio geothermicus DSM 3669 TaxID=1121426 RepID=A0A1I6EBP0_9FIRM)

HSP 1 Score: 54.3 bits (129), Expect = 4.780e-7
Identity = 30/59 (50.85%), Postives = 38/59 (64.41%), Query Frame = 1
Query:    1 DGTGRWEAYRGQLEATARPAPQVAFSLVNLLPLDAYLAGVVPSEVPNTFPEEALKAMAV 177
            +G GR + YRG LE           +++N LP++ YL GVVPSE+P TFP EALKA AV
Sbjct:  176 EGEGRVKRYRGNLEIRVNGD---GLTVINELPIEQYLYGVVPSEMPATFPLEALKAQAV 231          
BLAST of mRNA_P-wetherbeei_contig18032.1.1 vs. uniprot
Match: A0A1F6R9H4_9BACT (SpoIID domain-containing protein n=3 Tax=unclassified Candidatus Melainabacteria TaxID=1897007 RepID=A0A1F6R9H4_9BACT)

HSP 1 Score: 54.3 bits (129), Expect = 4.800e-7
Identity = 28/56 (50.00%), Postives = 35/56 (62.50%), Query Frame = 1
Query:   10 GRWEAYRGQLEATARPAPQVAFSLVNLLPLDAYLAGVVPSEVPNTFPEEALKAMAV 177
            G+   YRG+ E    P     FS+VN+LPL+ YL GVVP+E+P  F  EALKA  V
Sbjct:  133 GKPALYRGEFEIIKSPTKNNKFSVVNILPLEDYLKGVVPNELPTHFGLEALKAQTV 188          
BLAST of mRNA_P-wetherbeei_contig18032.1.1 vs. uniprot
Match: A0A6N2S845_9FIRM (Amidase enhancer n=1 Tax=uncultured Blautia sp. TaxID=765821 RepID=A0A6N2S845_9FIRM)

HSP 1 Score: 53.5 bits (127), Expect = 8.870e-7
Identity = 27/51 (52.94%), Postives = 36/51 (70.59%), Query Frame = 1
Query:   25 YRGQLEATARPAPQVAFSLVNLLPLDAYLAGVVPSEVPNTFPEEALKAMAV 177
            YRG ++ T +P     F +VN LPL+ YL  VVPSE+P+++P EALKA AV
Sbjct:  102 YRGTIKITKKPE---GFLIVNTLPLETYLESVVPSEMPSSYPLEALKAQAV 149          
BLAST of mRNA_P-wetherbeei_contig18032.1.1 vs. uniprot
Match: A0A847H194_9BACT (SpoIID/LytB domain-containing protein n=1 Tax=Candidatus Gastranaerophilales bacterium TaxID=2137880 RepID=A0A847H194_9BACT)

HSP 1 Score: 53.5 bits (127), Expect = 8.980e-7
Identity = 27/56 (48.21%), Postives = 35/56 (62.50%), Query Frame = 1
Query:   10 GRWEAYRGQLEATARPAPQVAFSLVNLLPLDAYLAGVVPSEVPNTFPEEALKAMAV 177
            G+  AYRG  E    P  +  FSLVN++PL+ YL GVVP+E+   F  EALKA  +
Sbjct:  129 GKQAAYRGVFEVVRAPGKEGKFSLVNIIPLEDYLKGVVPNELAPHFGMEALKAQTI 184          
BLAST of mRNA_P-wetherbeei_contig18032.1.1 vs. uniprot
Match: A0A7V4EIZ7_9BACT (SpoIID/LytB domain-containing protein n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7V4EIZ7_9BACT)

HSP 1 Score: 53.1 bits (126), Expect = 1.220e-6
Identity = 28/52 (53.85%), Postives = 39/52 (75.00%), Query Frame = 1
Query:   22 AYRGQLEATARPAPQVAFSLVNLLPLDAYLAGVVPSEVPNTFPEEALKAMAV 177
            +YRG +E +A P+P    SLVN++ L+ YL  VVPSE+P+++P EALKA AV
Sbjct:  113 SYRGIIEVSAGPSP----SLVNVVELEDYLRSVVPSEMPSSWPVEALKAQAV 160          
BLAST of mRNA_P-wetherbeei_contig18032.1.1 vs. uniprot
Match: A0A7V3L2S2_9BACT (SpoIID/LytB domain-containing protein n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7V3L2S2_9BACT)

HSP 1 Score: 52.4 bits (124), Expect = 2.290e-6
Identity = 24/51 (47.06%), Postives = 37/51 (72.55%), Query Frame = 1
Query:   25 YRGQLEATARPAPQVAFSLVNLLPLDAYLAGVVPSEVPNTFPEEALKAMAV 177
            YRG++E   +P       ++N+LP++ YL GVVPSE+P+++P EALKA A+
Sbjct:  200 YRGRIELRLKPT---GMQVINVLPVEDYLLGVVPSEMPSSYPIEALKAQAI 247          
BLAST of mRNA_P-wetherbeei_contig18032.1.1 vs. uniprot
Match: A0A1F6PGI7_9BACT (SpoIID domain-containing protein (Fragment) n=1 Tax=Candidatus Melainabacteria bacterium GWA2_34_9 TaxID=1801604 RepID=A0A1F6PGI7_9BACT)

HSP 1 Score: 52.4 bits (124), Expect = 2.300e-6
Identity = 28/56 (50.00%), Postives = 36/56 (64.29%), Query Frame = 1
Query:   10 GRWEAYRGQLEATARPAPQVAFSLVNLLPLDAYLAGVVPSEVPNTFPEEALKAMAV 177
            G+  AYRG  E    P      S++N+LPL+ YL GVVP+E+P +F  EALKA AV
Sbjct:  110 GKPAAYRGIFEIIRTPKKTDKLSVINVLPLEEYLRGVVPNELPVSFGLEALKAQAV 165          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18032.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A353QX76_9CYAN1.000e-751.79SpoIID domain-containing protein n=1 Tax=Cyanobact... [more]
K2EY43_9BACT1.370e-751.79SpoIID/LytB protein n=1 Tax=uncultured bacterium T... [more]
A0A7X8XL26_9BURK2.580e-754.24SpoIID/LytB domain-containing protein n=1 Tax=Burk... [more]
A0A1I6EBP0_9FIRM4.780e-750.85Stage II sporulation protein D n=1 Tax=Desulfoscip... [more]
A0A1F6R9H4_9BACT4.800e-750.00SpoIID domain-containing protein n=3 Tax=unclassif... [more]
A0A6N2S845_9FIRM8.870e-752.94Amidase enhancer n=1 Tax=uncultured Blautia sp. Ta... [more]
A0A847H194_9BACT8.980e-748.21SpoIID/LytB domain-containing protein n=1 Tax=Cand... [more]
A0A7V4EIZ7_9BACT1.220e-653.85SpoIID/LytB domain-containing protein n=1 Tax=Arma... [more]
A0A7V3L2S2_9BACT2.290e-647.06SpoIID/LytB domain-containing protein n=1 Tax=Arma... [more]
A0A1F6PGI7_9BACT2.300e-650.00SpoIID domain-containing protein (Fragment) n=1 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18032contigP-wetherbeei_contig18032:4..180 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog537007.BLAHAN_04942
PFAMsSpoIID
Model size177
Max annot lvl186801|Clostridia
KEGG koko:K06381
Hectar predicted targeting categoryother localisation
Exons1
Evalue9.61e-07
EggNOG OGsCOG2385@1|root,COG2385@2|Bacteria,1UW6J@1239|Firmicutes,24CYM@186801|Clostridia,3XYJD@572511|Blautia
DescriptionStage II sporulation protein
Cds size177
COG categoryD
BRITEko00000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186134.140377-CDS-P-wetherbeei_contig18032:3..1801683186134.140377-CDS-P-wetherbeei_contig18032:3..180Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig18032 4..180 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18032.1.1prot_P-wetherbeei_contig18032.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig18032 4..180 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig18032.1.1

>prot_P-wetherbeei_contig18032.1.1 ID=prot_P-wetherbeei_contig18032.1.1|Name=mRNA_P-wetherbeei_contig18032.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=59bp
DGTGRWEAYRGQLEATARPAPQVAFSLVNLLPLDAYLAGVVPSEVPNTFP
EEALKAMAV
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mRNA from alignment at P-wetherbeei_contig18032:4..180-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig18032.1.1 ID=mRNA_P-wetherbeei_contig18032.1.1|Name=mRNA_P-wetherbeei_contig18032.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=177bp|location=Sequence derived from alignment at P-wetherbeei_contig18032:4..180- (Phaeothamnion wetherbeei SAG_119_79)
GATGGCACCGGTCGCTGGGAAGCCTATCGGGGTCAACTGGAGGCGACGGC CCGGCCCGCGCCCCAGGTTGCCTTTTCTCTGGTCAATCTGCTTCCGCTCG ATGCCTATCTGGCGGGAGTGGTGCCCTCCGAGGTCCCCAATACGTTTCCT GAAGAGGCTCTCAAGGCCATGGCTGTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig18032:4..180-

>mRNA_P-wetherbeei_contig18032.1.1 ID=mRNA_P-wetherbeei_contig18032.1.1|Name=mRNA_P-wetherbeei_contig18032.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=177bp|location=Sequence derived from alignment at P-wetherbeei_contig18032:4..180- (Phaeothamnion wetherbeei SAG_119_79)
GATGGCACCGGTCGCTGGGAAGCCTATCGGGGTCAACTGGAGGCGACGGC
CCGGCCCGCGCCCCAGGTTGCCTTTTCTCTGGTCAATCTGCTTCCGCTCG
ATGCCTATCTGGCGGGAGTGGTGCCCTCCGAGGTCCCCAATACGTTTCCT
GAAGAGGCTCTCAAGGCCATGGCTGTG
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