mRNA_P-wetherbeei_contig18015.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig18015.1.1
Unique NamemRNA_P-wetherbeei_contig18015.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig18015.1.1 vs. uniprot
Match: A0A2R5GAN6_9STRA (EGF domain-specific O-linked N-acetylglucosamine transferase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GAN6_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 1.070e-7
Identity = 30/77 (38.96%), Postives = 45/77 (58.44%), Query Frame = 1 
Query:    1 RSTTRRVTNFEDLKAAAAAALPAAFVEELRLEDMPWPAQLEAFRRVDVLVGVFSAQMHNVMFLRPGSVVVLLVPPGF 231
            R T R + N +DL  A    LP   VE    E+MP+  Q+   R  DVL+ V  A + +++F+RPG++VV L+P G+
Sbjct:  234 RQTPRTLANAKDLVEALRRGLPDVDVEPTSFENMPFAEQVATVRDADVLLSVHGAGLTHLLFMRPGTLVVELIPSGY 310
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BLAST of mRNA_P-wetherbeei_contig18015.1.1 vs. uniprot
Match: A0A7S3XXH8_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXH8_HETAK)

HSP 1 Score: 54.3 bits (129), Expect = 1.010e-6
Identity = 23/52 (44.23%), Postives = 37/52 (71.15%), Query Frame = 1 
Query:   76 VEELRLEDMPWPAQLEAFRRVDVLVGVFSAQMHNVMFLRPGSVVVLLVPPGF 231
            +E ++LE+M +  Q++ F+R  VL+ ++    HNV+FLRPGS ++LLV P F
Sbjct:  404 LEIVQLENMTFSDQIKLFQRTSVLIAIWGTAAHNVVFLRPGSSLILLVHPNF 455
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BLAST of mRNA_P-wetherbeei_contig18015.1.1 vs. uniprot
Match: A0A1Y1HPW5_KLENI (Glycosyltransferase family 61 protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HPW5_KLENI)

HSP 1 Score: 52.8 bits (125), Expect = 3.450e-6
Identity = 31/77 (40.26%), Postives = 47/77 (61.04%), Query Frame = 1 
Query:    1 RSTTRRVTNFEDLKAAAAAALPAAF-VEELRLEDMPWPAQLEAFRRVDVLVGVFSAQMHNVMFLRPGSVVVLLVPPG 228
            R TTRR+TN++ L+A A   L A F V ++  E++     +   R  D LVGV  A + N +F+RPGSV++ ++P G
Sbjct:  279 RQTTRRLTNYDALRAVA---LNAGFKVSDVVFENLAPRESVRTMRACDSLVGVHGAGLSNTLFMRPGSVLLQIIPFG 352
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BLAST of mRNA_P-wetherbeei_contig18015.1.1 vs. uniprot
Match: T4ZXF6_OPHSC (Glycosyltransferase family 61 protein n=2 Tax=Ophiocordyceps sinensis TaxID=72228 RepID=T4ZXF6_OPHSC)

HSP 1 Score: 52.8 bits (125), Expect = 3.450e-6
Identity = 28/77 (36.36%), Postives = 46/77 (59.74%), Query Frame = 1 
Query:    1 RSTTRRVTNFEDLKAAAAAALPAAFVEELRLEDMPWPAQLEAFRRVDVLVGVFSAQMHNVMFLRPGSVVVLLVPPGF 231
            R+ TR++ +  +   A A+A+P   +  +    +P   Q++  R  DVLVGV  A + ++MFLRPGS V+ ++P GF
Sbjct:  335 RTNTRKLIDEAEHIGALASAIPHMKLNVVDFAALPLTGQIDIIRGTDVLVGVHGAGLTHLMFLRPGSTVIEILPEGF 411
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BLAST of mRNA_P-wetherbeei_contig18015.1.1 vs. uniprot
Match: A0A2C6A1I0_9HYPO (Uncharacterized protein n=1 Tax=Cordyceps sp. RAO-2017 TaxID=2004951 RepID=A0A2C6A1I0_9HYPO)

HSP 1 Score: 51.2 bits (121), Expect = 1.210e-5
Identity = 29/77 (37.66%), Postives = 45/77 (58.44%), Query Frame = 1 
Query:    1 RSTTRRVTNFEDLKAAAAAALPAAFVEELRLEDMPWPAQLEAFRRVDVLVGVFSAQMHNVMFLRPGSVVVLLVPPGF 231
            R+ TRR+ +  +   A   A+P   +  +    +P+  QL   RR D+LVGV  A + ++MFLRPGS V+ ++P GF
Sbjct:  367 RAHTRRLVDEAEHMDALRRAIPHMQLNVVDFAALPFVDQLRLVRRTDLLVGVHGAGLTHLMFLRPGSTVLEILPDGF 443
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18015.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2R5GAN6_9STRA1.070e-738.96EGF domain-specific O-linked N-acetylglucosamine t... [more]
A0A7S3XXH8_HETAK1.010e-644.23Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A1Y1HPW5_KLENI3.450e-640.26Glycosyltransferase family 61 protein n=1 Tax=Kleb... [more]
T4ZXF6_OPHSC3.450e-636.36Glycosyltransferase family 61 protein n=2 Tax=Ophi... [more]
A0A2C6A1I0_9HYPO1.210e-537.66Uncharacterized protein n=1 Tax=Cordyceps sp. RAO-... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18015contigP-wetherbeei_contig18015:1155..1385 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog72228.T4ZXF6
PFAMsDUF563
Model size231
Max annot lvl4751|Fungi
KEGG rclassRC00005,RC00059
KEGG koko:K18134
KEGG ReactionR09304,R09676
KEGG Pathwayko00514,map00514
Hectar predicted targeting categoryother localisation
Exons1
Evalue5.66e-07
EggNOG OGsKOG4698@1|root,KOG4698@2759|Eukaryota,38DN6@33154|Opisthokonta,3NTZG@4751|Fungi,3QQZ2@4890|Ascomycota,212TW@147550|Sordariomycetes,3TGQU@5125|Hypocreales
EC2.4.1.255
DescriptionDUF563 domain protein
Cds size231
COG categoryS
CAZyGT41
BRITEko00000,ko00001,ko01000,ko01003
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186133.650271-CDS-P-wetherbeei_contig18015:1154..13851683186133.650271-CDS-P-wetherbeei_contig18015:1154..1385Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig18015 1155..1385 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18015.1.1prot_P-wetherbeei_contig18015.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig18015 1155..1385 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig18015.1.1

>prot_P-wetherbeei_contig18015.1.1 ID=prot_P-wetherbeei_contig18015.1.1|Name=mRNA_P-wetherbeei_contig18015.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=77bp
RSTTRRVTNFEDLKAAAAAALPAAFVEELRLEDMPWPAQLEAFRRVDVLV
GVFSAQMHNVMFLRPGSVVVLLVPPGF
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mRNA from alignment at P-wetherbeei_contig18015:1155..1385-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig18015.1.1 ID=mRNA_P-wetherbeei_contig18015.1.1|Name=mRNA_P-wetherbeei_contig18015.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=231bp|location=Sequence derived from alignment at P-wetherbeei_contig18015:1155..1385- (Phaeothamnion wetherbeei SAG_119_79)
CGCTCCACCACTCGCCGCGTGACCAACTTCGAAGATCTCAAGGCGGCTGC
TGCGGCGGCGCTTCCGGCCGCGTTCGTGGAGGAGTTACGCCTGGAGGACA
TGCCATGGCCGGCGCAGCTGGAGGCGTTCCGCCGCGTCGACGTCTTGGTG
GGGGTTTTCAGCGCACAAATGCACAATGTGATGTTCCTCCGGCCTGGGAG
TGTCGTAGTGCTTCTAGTGCCGCCGGGCTTT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig18015:1155..1385-

>mRNA_P-wetherbeei_contig18015.1.1 ID=mRNA_P-wetherbeei_contig18015.1.1|Name=mRNA_P-wetherbeei_contig18015.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=231bp|location=Sequence derived from alignment at P-wetherbeei_contig18015:1155..1385- (Phaeothamnion wetherbeei SAG_119_79)
CGCTCCACCACTCGCCGCGTGACCAACTTCGAAGATCTCAAGGCGGCTGC
TGCGGCGGCGCTTCCGGCCGCGTTCGTGGAGGAGTTACGCCTGGAGGACA
TGCCATGGCCGGCGCAGCTGGAGGCGTTCCGCCGCGTCGACGTCTTGGTG
GGGGTTTTCAGCGCACAAATGCACAATGTGATGTTCCTCCGGCCTGGGAG
TGTCGTAGTGCTTCTAGTGCCGCCGGGCTTT
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