mRNA_P-wetherbeei_contig18006.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig18006.1.1 vs. uniprot
Match: A0A7S3Y5X8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5X8_HETAK) HSP 1 Score: 116 bits (290), Expect = 1.020e-30 Identity = 50/96 (52.08%), Postives = 69/96 (71.88%), Query Frame = 1
Query: 1 HRGALRFPRESFAYVGVVPDDGVFDLNRAIEGEIANSLIPFRRDPYACNSESGLPQKRAQRNPFQRSPPYVNTCPEMSELLHYCGPVAFPQPLPWN 288
HR ALRFP+E F+++GVVP FDL +A EGE N+L P+ DPY CN+++ L +KR +RNPF R PPY+ +CPE++ LL +CGP + LPW+
Sbjct: 70 HRAALRFPKEDFSFLGVVPQSTKFDLQKATEGESQNALTPYLSDPYGCNTDA-LSEKRKERNPFFRQPPYLLSCPEIAPLLQWCGPQIYQGYLPWS 164
BLAST of mRNA_P-wetherbeei_contig18006.1.1 vs. uniprot
Match: B8C2M3_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C2M3_THAPS) HSP 1 Score: 112 bits (279), Expect = 2.090e-28 Identity = 55/97 (56.70%), Postives = 66/97 (68.04%), Query Frame = 1
Query: 1 HRGALRFPRESFAYVGVVPDDGV-FDLNRAIEGEIANSLIPFRRDPYACNSESGLPQKRAQRNPFQRSPPYVNTCPEMSELLHYCGPVAFPQP-LPW 285
H GAL++P F YVGV P FDLN + EGE NSL+PF DPY C++E L QKR +RNPF R+PPY TCPEM ELLH+CGP P+ +PW
Sbjct: 145 HAGALQWPIARFDYVGVDPPSSTGFDLNESSEGEKRNSLVPFTSDPYGCHTEL-LQQKRKERNPFARTPPYDLTCPEMKELLHWCGPELIPKASVPW 240
BLAST of mRNA_P-wetherbeei_contig18006.1.1 vs. uniprot
Match: B7FTW7_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FTW7_PHATC) HSP 1 Score: 103 bits (256), Expect = 8.810e-25 Identity = 47/97 (48.45%), Postives = 67/97 (69.07%), Query Frame = 1
Query: 1 HRGALRFPRESFAYVGVVPDDGV-FDLNRAIEGEIANSLIPFRRDPYACNSESGLPQKRAQRNPFQRSPPYVNTCPEMSELLHYCGPVAFPQP-LPW 285
H AL++P++SF+Y+GV P+ F+L A+ GE+ N+ PF DPY C+S+ L +KR RNPF+R+PPY +CP+M ELL YCGP P+ +PW
Sbjct: 166 HAQALQWPKQSFSYIGVDPEANTGFNLQEAVVGELENAAKPFEIDPYGCHSQV-LQEKRRSRNPFKRTPPYELSCPDMKELLSYCGPAIIPKSKVPW 261
BLAST of mRNA_P-wetherbeei_contig18006.1.1 vs. uniprot
Match: A0A7S2HNT6_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HNT6_9STRA) HSP 1 Score: 104 bits (259), Expect = 1.330e-24 Identity = 50/98 (51.02%), Postives = 64/98 (65.31%), Query Frame = 1
Query: 1 HRGALRFPRESFAYVGV--VPDDGVFDLNRAIEGEIANSLIPFRRDPYACNSESGLPQKRAQRNPFQRSPPYVNTCPEMSELLHYCGPVAFPQPLPWN 288
H AL +P F+YVG+ +P G FDL ++ GE+ N+ PF DPY C+S L QKR +RNPF R+PPY +CP+MS LL YCGP FP LPW+
Sbjct: 246 HAKALHWPLNRFSYVGIDPLPSTG-FDLAKSKAGEVQNAAKPFESDPYGCHSPI-LQQKRKERNPFSRTPPYKLSCPDMSRLLDYCGPELFPSELPWD 341
BLAST of mRNA_P-wetherbeei_contig18006.1.1 vs. uniprot
Match: A0A1E7EWA2_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EWA2_9STRA) HSP 1 Score: 101 bits (252), Expect = 2.440e-24 Identity = 50/97 (51.55%), Postives = 64/97 (65.98%), Query Frame = 1
Query: 1 HRGALRFPRESFAYVGVVPDDGV-FDLNRAIEGEIANSLIPFRRDPYACNSESGLPQKRAQRNPFQRSPPYVNTCPEMSELLHYCGPVAFP-QPLPW 285
H ALR+P + FAY+GV P FDL R+ EGE N+ PF +DPY C++ + L +KR RNPFQR+PPY +CPEM ELL +CGP Q +PW
Sbjct: 149 HAPALRWPADRFAYIGVDPPASTGFDLQRSTEGESKNAAAPFAQDPYGCHT-AVLQEKRNSRNPFQRTPPYGLSCPEMKELLQFCGPEFISVQLIPW 244
BLAST of mRNA_P-wetherbeei_contig18006.1.1 vs. uniprot
Match: A0A7S2YSI4_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YSI4_9STRA) HSP 1 Score: 101 bits (251), Expect = 4.580e-24 Identity = 52/98 (53.06%), Postives = 62/98 (63.27%), Query Frame = 1
Query: 1 HRGALRFPRESFAYVGV--VPDDGVFDLNRAIEGEIANSLIPFRRDPYACNSESGLPQKRAQRNPFQRSPPYVNTCPEMSELLHYCGPVAFP-QPLPW 285
H ALR+P F YVGV P DG F L A +GE N+ PF DPY C+S L +KR QRNPF R+PPY +CP+M EL+HYCGP FP + PW
Sbjct: 161 HAEALRWPSSKFFYVGVDPSPSDG-FRLEEASKGEAENAAKPFESDPYGCSSPV-LKKKREQRNPFYRTPPYDLSCPDMKELMHYCGPQLFPIEKTPW 256
BLAST of mRNA_P-wetherbeei_contig18006.1.1 vs. uniprot
Match: A0A835Z903_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z903_9STRA) HSP 1 Score: 100 bits (248), Expect = 3.350e-23 Identity = 45/97 (46.39%), Postives = 59/97 (60.82%), Query Frame = 1
Query: 1 HRGALRFPRESFAYVGVVPDDGVFDLNRAIEGEIANSLIPFRRDPYACNSESGLPQKRAQRNPFQRSPPYVNTCPEMSELLHYCGPVAFPQPLPWNP 291
H ALR+P + +Y+G+ P FD A GE A++ +PF+ DPY C S L KR RNP+ R PPY T PEM+ELL +CGP + LPW+P
Sbjct: 199 HAAALRYPARAVSYLGIAPRGARFDTAGATAGEAAHAALPFKTDPYGCGSPV-LADKRRDRNPYAREPPYPLTAPEMAELLRWCGPGIYAGALPWDP 294
BLAST of mRNA_P-wetherbeei_contig18006.1.1 vs. uniprot
Match: A0A7S1FSM8_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FSM8_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 7.510e-23 Identity = 47/97 (48.45%), Postives = 62/97 (63.92%), Query Frame = 1
Query: 1 HRGALRFPRESFAYVGVVPDDGV-FDLNRAIEGEIANSLIPFRRDPYACNSESGLPQKRAQRNPFQRSPPYVNTCPEMSELLHYCGPVAF-PQPLPW 285
H GAL +P + F + GV P F+LN AI GE N+ +PF DPY C++ + L +KR QRNPF R+PPY TCPE+ LL +CGP + + LPW
Sbjct: 56 HAGALIWPPDQFRFTGVDPPSYTGFNLNDAIAGEQKNAALPFAGDPYGCHT-AALQEKRKQRNPFMRTPPYELTCPEIKSLLTWCGPEIYNEEDLPW 151
BLAST of mRNA_P-wetherbeei_contig18006.1.1 vs. uniprot
Match: A0A7S4S882_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4S882_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 1.190e-22 Identity = 47/97 (48.45%), Postives = 60/97 (61.86%), Query Frame = 1
Query: 1 HRGALRFPRESFAYVGVVPDDGV-FDLNRAIEGEIANSLIPFRRDPYACNSESGLPQKRAQRNPFQRSPPYVNTCPEMSELLHYCGPVAFPQPLPWN 288
H ALR+P +F+YVG+ P FDL ++ E N+ PF DPY CNS L QKR RNPF R+PPY +C E+ +LL +CGP FP LPW+
Sbjct: 234 HAKALRWPLNAFSYVGIDPSASTGFDLQKSTVAEYQNAAKPFETDPYGCNSPI-LQQKRLDRNPFSRTPPYKLSCVELVDLLDWCGPELFPYELPWD 329
BLAST of mRNA_P-wetherbeei_contig18006.1.1 vs. uniprot
Match: A0A1Z5JCQ7_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JCQ7_FISSO) HSP 1 Score: 98.6 bits (244), Expect = 1.550e-22 Identity = 48/97 (49.48%), Postives = 63/97 (64.95%), Query Frame = 1
Query: 1 HRGALRFPRESFAYVGVVPDDGV-FDLNRAIEGEIANSLIPFRRDPYACNSESGLPQKRAQRNPFQRSPPYVNTCPEMSELLHYCGPVAFP-QPLPW 285
H ALR+P F Y+GV P F L A++GE+ NS+ PF+ DPY C+S+ L +KR QRNPF R+PPY +CPEMS+LL +CG P +PW
Sbjct: 227 HAKALRWPPNRFQYIGVDPSASTGFVLEEAMKGELENSVKPFQSDPYGCHSKI-LQEKRKQRNPFSRTPPYTLSCPEMSDLLRFCGSDLIPLDKVPW 322 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18006.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig18006.1.1 >prot_P-wetherbeei_contig18006.1.1 ID=prot_P-wetherbeei_contig18006.1.1|Name=mRNA_P-wetherbeei_contig18006.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=106bp HRGALRFPRESFAYVGVVPDDGVFDLNRAIEGEIANSLIPFRRDPYACNSback to top mRNA from alignment at P-wetherbeei_contig18006:770..1376- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig18006.1.1 ID=mRNA_P-wetherbeei_contig18006.1.1|Name=mRNA_P-wetherbeei_contig18006.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=607bp|location=Sequence derived from alignment at P-wetherbeei_contig18006:770..1376- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig18006:770..1376- >mRNA_P-wetherbeei_contig18006.1.1 ID=mRNA_P-wetherbeei_contig18006.1.1|Name=mRNA_P-wetherbeei_contig18006.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=318bp|location=Sequence derived from alignment at P-wetherbeei_contig18006:770..1376- (Phaeothamnion wetherbeei SAG_119_79)back to top |