mRNA_P-wetherbeei_contig17993.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig17993.1.1 vs. uniprot
Match: A0A7Y4QBQ2_9BACT (ABC transporter permease n=1 Tax=Cyclobacteriaceae bacterium TaxID=2099675 RepID=A0A7Y4QBQ2_9BACT) HSP 1 Score: 244 bits (623), Expect = 5.490e-76 Identity = 123/213 (57.75%), Postives = 174/213 (81.69%), Query Frame = 1
Query: 1 MNKVLLIIQREFLNRVQKKSFLLTTILVPLIFPAIMGVMIYIVIKQSEVTNVKTVQVLDESHKFTLKDTKEFKFLAITSSLDQAKIAYDSSEDFGLVYIPPFEISDPKGFTLVSHENPTVEQLDHLEDFFEDQVRNMKLEQYKVDQATLDALNTNIDIHQVTKDIHTGEEKSSSSGLIYGVGFVLGILIYMFVLIYGIQIMEGVIDEKTSKVV 639
MNKV LI+QREFLNRVQKKSFL+TTILVPLIFPAI+GV++YI+ K++E +TVQV+DES KF +++K + F+ ++ L+QAK AY+ ++DF L+YIPPF++S P+G + + ENP++E++ LE +D++R++KLE+YK+D+ TL L ++++ Q+ TGEEKSS+SG++YG+GF LGILIYMFVL+YGIQIM+GVIDEKTSK+V
Sbjct: 1 MNKVWLIMQREFLNRVQKKSFLITTILVPLIFPAIIGVLVYIMKKEAESAKAETVQVVDESGKFVFENSKRYTFVPLSMPLEQAKKAYNETKDFALLYIPPFDLSKPEGMVIYTKENPSIEKVGGLESILQDRIRDLKLEEYKIDKETLKGLKVSVNLKQINLS-ETGEEKSSNSGILYGLGFGLGILIYMFVLVYGIQIMQGVIDEKTSKIV 212
BLAST of mRNA_P-wetherbeei_contig17993.1.1 vs. uniprot
Match: A0A7Y4QXI7_9BACT (ABC transporter permease n=1 Tax=Cyclobacteriaceae bacterium TaxID=2099675 RepID=A0A7Y4QXI7_9BACT) HSP 1 Score: 243 bits (619), Expect = 2.190e-75 Identity = 122/213 (57.28%), Postives = 173/213 (81.22%), Query Frame = 1
Query: 1 MNKVLLIIQREFLNRVQKKSFLLTTILVPLIFPAIMGVMIYIVIKQSEVTNVKTVQVLDESHKFTLKDTKEFKFLAITSSLDQAKIAYDSSEDFGLVYIPPFEISDPKGFTLVSHENPTVEQLDHLEDFFEDQVRNMKLEQYKVDQATLDALNTNIDIHQVTKDIHTGEEKSSSSGLIYGVGFVLGILIYMFVLIYGIQIMEGVIDEKTSKVV 639
MNK+ LIIQREFL RVQKKSFL+TTILVPL+FPAI+GV++YI+ K++E TVQV+DES KF ++TK + F+ ++ S+D+AK AY ++DF L+YIPPF+I+ P+G + + ENP++E++ LE +D++R++KLE YK+D+ TL +L ++++ Q+ TGEEKSS+SG++YG+GF+LGILIYMFVL+YGIQIM+GVIDEKTSK+V
Sbjct: 1 MNKIWLIIQREFLTRVQKKSFLITTILVPLVFPAIIGVLVYIMKKEAESAKADTVQVVDESGKFIFENTKRYNFVPLSLSIDKAKDAYKQTKDFALLYIPPFDINKPEGMIIYTKENPSIEKVGGLESIIQDRIRDLKLEAYKIDKETLKSLKVSVNLKQINIS-ETGEEKSSNSGILYGLGFLLGILIYMFVLVYGIQIMQGVIDEKTSKIV 212
BLAST of mRNA_P-wetherbeei_contig17993.1.1 vs. uniprot
Match: A0A136LL67_9BACT (Na+ efflux pump ABC transporter permease n=2 Tax=Bacteroidetes TaxID=976 RepID=A0A136LL67_9BACT) HSP 1 Score: 228 bits (582), Expect = 7.930e-70 Identity = 118/213 (55.40%), Postives = 165/213 (77.46%), Query Frame = 1
Query: 1 MNKVLLIIQREFLNRVQKKSFLLTTILVPLIFPAIMGVMIYIVIKQSEVTNVKTVQVLDESHKFTLKDTKEFKFLAITSSLDQAKIAYDSSEDFGLVYIPPFEISDPKGFTLVSHENPTVEQLDHLEDFFEDQVRNMKLEQYKVDQATLDALNTNIDIHQVTKDIHTGEEKSSSSGLIYGVGFVLGILIYMFVLIYGIQIMEGVIDEKTSKVV 639
M+KV LIIQREFLNRVQKKSFL+ TILVPLIFP I+G + Y+ +K++E +T+QVLDES +++K+F F+ + L+QAK AY+ ++DFGL+YIP F I+ P+G L + ENP++E++ +L+ E Q++++KL++Y +D+A L +L +++ Q TGEEKSSSSGL+YG+GF LGILIYMFVL+YGIQIM+GVIDEKTSK+V
Sbjct: 1 MSKVWLIIQREFLNRVQKKSFLIATILVPLIFPVIIGGLFYVALKEAESATAETIQVLDESKMLKFENSKQFTFVLLDMPLEQAKKAYNETDDFGLLYIPAFNINKPEGLVLYTKENPSIEKVSNLKSSIEHQIQDLKLKEYNIDEAILKSLRPTVNLKQFNLT-ETGEEKSSSSGLLYGLGFFLGILIYMFVLVYGIQIMQGVIDEKTSKIV 212
BLAST of mRNA_P-wetherbeei_contig17993.1.1 vs. uniprot
Match: A0A7L9BBM0_9BACT (ABC transporter permease n=1 Tax=Flammeovirgaceae bacterium TaxID=2026740 RepID=A0A7L9BBM0_9BACT) HSP 1 Score: 226 bits (575), Expect = 8.630e-69 Identity = 117/213 (54.93%), Postives = 163/213 (76.53%), Query Frame = 1
Query: 1 MNKVLLIIQREFLNRVQKKSFLLTTILVPLIFPAIMGVMIYIVIKQSEVTNVKTVQVLDESHKFTLKDTKEFKFLAITSSLDQAKIAYDSSEDFGLVYIPPFEISDPKGFTLVSHENPTVEQLDHLEDFFEDQVRNMKLEQYKVDQATLDALNTNIDIHQVTKDIHTGEEKSSSSGLIYGVGFVLGILIYMFVLIYGIQIMEGVIDEKTSKVV 639
M K+LLIIQREFLNRVQKKSFLLTTILVPL+FPAIM +++ ++I+++E TVQV+DES K + ++T+ F F+ + LDQAK + SE+FGL+YIP F + P GF L + ENP++E+ + LE ED++ ++KLE + +++ L L +NI + Q + +GEEKSS+SG++YG GF+LGILIY+FVL+YGIQIM+GVIDEKTSK+V
Sbjct: 1 MKKILLIIQREFLNRVQKKSFLLTTILVPLVFPAIMALLVVLMIREAESAKPDTVQVVDESGKCSFENTRRFNFVPLNMPLDQAKTVFQQSENFGLLYIPDFNLEKPDGFILYTKENPSIEKTEQLEGMIEDRLHDLKLEAFNINKEVLKNLKSNISLRQF-RISESGEEKSSNSGILYGAGFLLGILIYIFVLVYGIQIMQGVIDEKTSKIV 212
BLAST of mRNA_P-wetherbeei_contig17993.1.1 vs. uniprot
Match: A0A3D5KNT4_9BACT (ABC transporter permease n=1 Tax=Cytophagales bacterium TaxID=2053541 RepID=A0A3D5KNT4_9BACT) HSP 1 Score: 220 bits (560), Expect = 1.810e-66 Identity = 120/216 (55.56%), Postives = 163/216 (75.46%), Query Frame = 1
Query: 1 MNKVLLIIQREFLNRVQKKSFLLTTILVPLIFPAIMGVMIYIVIKQSEVTNVKTVQVLDESHKFTL---KDTKEFKFLAITSSLDQAKIAYDSSEDFGLVYIPPFEISDPKGFTLVSHENPTVEQLDHLEDFFEDQVRNMKLEQYKVDQATLDALNTNIDIHQVTKDIHTGEEKSSSSGLIYGVGFVLGILIYMFVLIYGIQIMEGVIDEKTSKVV 639
MNKV LIIQREFL RV+KKSFL+ TILVPL+ P I+G +IY+ +KQSE TV VLDES +F L K+TK F F+ + SL+QAKIAY+ ++DF L+Y+P F+I++PKG TL + ENP++E++ LE ++VR++KL++YK+D+ L L T ID+ Q+ TGEEKSS+SG++ G LGI+IY+FVL+ GI+IM+GVIDEKTSKVV
Sbjct: 1 MNKVWLIIQREFLTRVKKKSFLIVTILVPLLVPTILGGLIYVAVKQSEAAKPDTVLVLDESGQFNLDTTKNTKRFHFIPLQVSLEQAKIAYNETKDFALLYVPQFDINNPKGLTLYTQENPSIEKVGELESILAERVRDLKLQEYKIDKEVLKNLRTKIDLKQINLS-KTGEEKSSNSGILGLTGVALGIMIYIFVLVDGIEIMQGVIDEKTSKVV 215
BLAST of mRNA_P-wetherbeei_contig17993.1.1 vs. uniprot
Match: UPI001A0EA243 (ABC transporter permease n=1 Tax=Cytophagales bacterium WSM2-2 TaxID=2774202 RepID=UPI001A0EA243) HSP 1 Score: 219 bits (559), Expect = 2.300e-66 Identity = 118/216 (54.63%), Postives = 166/216 (76.85%), Query Frame = 1
Query: 1 MNKVLLIIQREFLNRVQKKSFLLTTILVPLIFPAIMGVMIYIVIKQSEVTNVKTVQVLDESHKFTL---KDTKEFKFLAITSSLDQAKIAYDSSEDFGLVYIPPFEISDPKGFTLVSHENPTVEQLDHLEDFFEDQVRNMKLEQYKVDQATLDALNTNIDIHQVTKDIHTGEEKSSSSGLIYGVGFVLGILIYMFVLIYGIQIMEGVIDEKTSKVV 639
MNKV LIIQREFL RV+KKSFL+ TILVPLIFPAI+G ++YI++K+ E TV ++DES L K+TK F F+ + + L+QAK Y+ ++DF L+YIP FEI+ P+G + + ENP++E+++ LE ++VR++KL+ +K+D+ L L T+I++ Q+ TGEEKSS+SG++YG+GFVLGI+IY+FVL+YGIQIM+GVIDEKTSKVV
Sbjct: 1 MNKVWLIIQREFLIRVRKKSFLIATILVPLIFPAIIGGLVYIMMKEVESAKPDTVMIVDESGLINLDSTKNTKRFHFVPLQNPLEQAKKVYNETKDFALLYIPKFEINKPEGMVIYTQENPSIEKVNDLESILAERVRDLKLQDFKIDKEVLKNLRTSINLKQINLS-KTGEEKSSNSGILYGLGFVLGIMIYIFVLVYGIQIMQGVIDEKTSKVV 215
BLAST of mRNA_P-wetherbeei_contig17993.1.1 vs. uniprot
Match: A0A401UB99_9BACT (ABC transporter permease n=1 Tax=Chryseotalea sanaruensis TaxID=2482724 RepID=A0A401UB99_9BACT) HSP 1 Score: 207 bits (528), Expect = 9.100e-62 Identity = 113/213 (53.05%), Postives = 156/213 (73.24%), Query Frame = 1
Query: 1 MNKVLLIIQREFLNRVQKKSFLLTTILVPLIFPAIMGVMIYIVIKQSEVTNVKTVQVLDESHKFTLKDTKEFKFLAITSSLDQAKIAYDSSEDFGLVYIPPFEISDPKGFTLVSHENPTVEQLDHLEDFFEDQVRNMKLEQYKVDQATLDALNTNIDIHQVTKDIHTGEEKSSSSGLIYGVGFVLGILIYMFVLIYGIQIMEGVIDEKTSKVV 639
MNK+ LI+QREFLNRVQKKSFL+ TILVPLIFP I+ + + +I++ E + V VLDES KFT +TK F F+ +D AK Y +++DF L+YIP F++S P GFT+ EN + E++ LE ED++R++KLEQY++D+ TL L T+ID QV TGEEKSS+S ++ +GF+LGI++++FVL YG+QIM+GVIDEKTSK+V
Sbjct: 1 MNKIWLIVQREFLNRVQKKSFLIATILVPLIFPTIIAGLFWFMIREVETAKPEVVHVLDESGKFTFTNTKRFIFIEEKGVIDSAKKTYSATKDFALLYIPSFDLSKPDGFTIYMKENQSDEKISGLERILEDRIRDLKLEQYQIDKETLAGLKTSIDFKQVNIS-DTGEEKSSNSMILKILGFLLGIVLFVFVLSYGMQIMQGVIDEKTSKIV 212
BLAST of mRNA_P-wetherbeei_contig17993.1.1 vs. uniprot
Match: A0A355BW43_9BACT (ABC transporter permease n=1 Tax=Cytophagales bacterium TaxID=2053541 RepID=A0A355BW43_9BACT) HSP 1 Score: 202 bits (515), Expect = 6.830e-60 Identity = 107/213 (50.23%), Postives = 157/213 (73.71%), Query Frame = 1
Query: 1 MNKVLLIIQREFLNRVQKKSFLLTTILVPLIFPAIMGVMIYIVIKQSEVTNVKTVQVLDESHKFTLKDTKEFKFLAITSSLDQAKIAYDSSEDFGLVYIPPFEISDPKGFTLVSHENPTVEQLDHLEDFFEDQVRNMKLEQYKVDQATLDALNTNIDIHQVTKDIHTGEEKSSSSGLIYGVGFVLGILIYMFVLIYGIQIMEGVIDEKTSKVV 639
MNK+ LIIQREFLNRVQKKSFL+ TIL+PLIFPAI+G++++I + + + + + +D+S F L D+ F+F SL+ AK AYD SEDFGL+YIP + +S P+G TL S ++P++E + ++E FE+Q++++K+ + +DQ LD+L TN+ I V K G+EKSS+ G+++G+G GIL+YMF+ IYG QIM+G+I+EKTSKVV
Sbjct: 1 MNKIWLIIQREFLNRVQKKSFLVATILIPLIFPAIIGLLVFIAKESDKNSKKQVIHYVDDSKAF-LPDSGRFQFKPFAGSLEDAKKAYDQSEDFGLLYIPTYNLSKPEGITLYSKKSPSLEDVSNIERLFENQIKDVKMRKLNIDQKLLDSLKTNVSIKTV-KLSEGGQEKSSNVGILFGIGMAGGILMYMFIFIYGAQIMQGIIEEKTSKVV 211
BLAST of mRNA_P-wetherbeei_contig17993.1.1 vs. uniprot
Match: A0A3B8W862_9BACT (ABC transporter permease (Fragment) n=1 Tax=Cytophagales bacterium TaxID=2053541 RepID=A0A3B8W862_9BACT) HSP 1 Score: 195 bits (496), Expect = 1.500e-58 Identity = 113/215 (52.56%), Postives = 153/215 (71.16%), Query Frame = 1
Query: 1 MNKVLLIIQREFLNRVQKKSFLLTTILVPLIFPAIMGVMIYIVIKQSEVTNVKTVQVLDESHKFTLKDTKEFKFLAITSSLDQAKIAYDSSEDFGLVYIPPFE-ISDPKGFTLVSHENPTVEQLDHLEDFFEDQVRNMKLEQYKVDQATL-DALNTNIDIHQVTKDIHTGEEKSSSSGLIYGVGFVLGILIYMFVLIYGIQIMEGVIDEKTSKVV 639
MNKV LIIQREFLNRVQKKSFL+TTILVPLI PAIMGV++Y++I++ T+QVLDES F L+ K + ++ S+ Q K AY S+DFGL+YIPP E I D G TL + E+ + E++ ++ D V++ K+E+Y VD+ TL D T +++ ++ G+E+SS++ + G+G LGILIYMFVLIYGIQIM+GVIDEKTSK+V
Sbjct: 1 MNKVWLIIQREFLNRVQKKSFLITTILVPLIIPAIMGVLVYVMIQEVNEAKPDTLQVLDESQLFKLESNKRLTIVPVSGSIVQVKAAYMESDDFGLLYIPPAESIGDITGITLYTKESQSPEKVGNVTSMLTDLVKDSKMEKYNVDKETLKDIRTTEVNLQEINLS-EDGQEQSSNTQIKSGLGMALGILIYMFVLIYGIQIMQGVIDEKTSKIV 214
BLAST of mRNA_P-wetherbeei_contig17993.1.1 vs. uniprot
Match: A0A1M5WHW4_9BACT (ABC-2 type transport system permease protein n=2 Tax=Chryseolinea TaxID=1433993 RepID=A0A1M5WHW4_9BACT) HSP 1 Score: 195 bits (495), Expect = 5.910e-57 Identity = 106/213 (49.77%), Postives = 151/213 (70.89%), Query Frame = 1
Query: 1 MNKVLLIIQREFLNRVQKKSFLLTTILVPLIFPAIMGVMIYIVIKQSEVTNVKTVQVLDESHKFTLKDTKEFKFLAITSSLDQAKIAYDSSEDFGLVYIPPFEISDPKGFTLVSHENPTVEQLDHLEDFFEDQVRNMKLEQYKVDQATLDALNTNIDIHQVTKDIHTGEEKSSSSGLIYGVGFVLGILIYMFVLIYGIQIMEGVIDEKTSKVV 639
MNK+ LIIQREFLNRVQKKSFL+ TI++PLIFPAIM V++Y I+Q + +T+Q +DES F + DT +F F + + + AK A+ +S+D+GL+YIP FE+S P G TL + NP+ + +LE E+Q+R +K++++ VDQ LD+L T++ I G+EK S+S ++ GVG GIL+YMF+ IYG QIM+G+I+EKTSKVV
Sbjct: 1 MNKIFLIIQREFLNRVQKKSFLIATIVLPLIFPAIMAVLVYFSIQQRKNATRQTIQYVDESGLF-VPDTSKFVFKKLMTDVKSAKEAFQTSDDYGLLYIPHFELSHPDGVTLYTKINPSPNDIGNLEGMLENQIRELKMKKFNVDQKVLDSLKTDVPIENFNV-ADAGQEKKSNSNVLLGVGVAAGILMYMFIFIYGAQIMQGIIEEKTSKVV 211 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17993.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig17993.1.1 >prot_P-wetherbeei_contig17993.1.1 ID=prot_P-wetherbeei_contig17993.1.1|Name=mRNA_P-wetherbeei_contig17993.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=213bp MNKVLLIIQREFLNRVQKKSFLLTTILVPLIFPAIMGVMIYIVIKQSEVTback to top mRNA from alignment at P-wetherbeei_contig17993:2..640- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig17993.1.1 ID=mRNA_P-wetherbeei_contig17993.1.1|Name=mRNA_P-wetherbeei_contig17993.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=639bp|location=Sequence derived from alignment at P-wetherbeei_contig17993:2..640- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig17993:2..640- >mRNA_P-wetherbeei_contig17993.1.1 ID=mRNA_P-wetherbeei_contig17993.1.1|Name=mRNA_P-wetherbeei_contig17993.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=639bp|location=Sequence derived from alignment at P-wetherbeei_contig17993:2..640- (Phaeothamnion wetherbeei SAG_119_79)back to top |