mRNA_P-wetherbeei_contig17917.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig17917.1.1
Unique NamemRNA_P-wetherbeei_contig17917.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig17917.1.1 vs. uniprot
Match: A0A7X9AEC1_9BURK (Pseudouridine synthase n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X9AEC1_9BURK)

HSP 1 Score: 355 bits (912), Expect = 6.670e-120
Identity = 175/303 (57.76%), Postives = 230/303 (75.91%), Query Frame = 1
Query:   13 EFTTGESDAGDRLDQYLVRCLPDRSRSIIQDWIESGLVMVAGGPRKSSFRLKANQEILVEVPPLEPADPEPEN-IPLDVLYEDEHILVLNKQKGLVIHPAPSNLTGTLVNALLYHCRDLSGIRGVEKPGIVHRLDKDTTGVMVVAKHDVAHLSLTTQFADRTVLKIYEAIAHGHPSPSKGTVNQPVGRHTVDRIRMSVNSKGKTAITDYEVHEEFFYREQRYSRIELHLHTGRTHQIRVHMAHLGHPLVGDPLYGKRPNPWGMEGQALHCKRLGFAHPVSHKPLEFEARPHEEYMTVLKALRG 918
            EF   E+ AG RLD +L      RSRS +QDWI+ G V + G P ++S +++  Q +L+E+PPL PA P+PE  +PLD++YED H+LV+NK +G+ IHP     +GTLVNALL HC DLSGIRGVE+PGIVHRLDKDT+G++VVAK+D+AH+ L+ QFA+R++LKIY+A+ HG P P++G V QP+GRH + R RM+V   G++A TDYEV E F    Q ++ +EL LHTGRTHQIRVHM  LGHPLVGDP+YG+RPNPW + GQALHC+RLGF HPV ++P+EFEA   E  + +L+ LRG
Sbjct:    3 EFQVDEAAAGVRLDVFLAS-QTGRSRSQVQDWIQQGRVHLQGRPARASEKVRPGQALLLEIPPLAPAIPQPEEGLPLDIIYEDAHLLVVNKSRGVTIHPGSGARSGTLVNALLAHCSDLSGIRGVERPGIVHRLDKDTSGLIVVAKNDLAHVGLSVQFAERSILKIYQALVHGVP-PARGVVEQPIGRHRIHRQRMAVRPNGRSARTDYEVLEAFG---QDHALLELQLHTGRTHQIRVHMTWLGHPLVGDPVYGRRPNPWELRGQALHCRRLGFFHPVLNRPMEFEAPLPEVLVRILEDLRG 300          
BLAST of mRNA_P-wetherbeei_contig17917.1.1 vs. uniprot
Match: A0A7Z9PZS8_9BACT (Pseudouridine synthase n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Z9PZS8_9BACT)

HSP 1 Score: 330 bits (846), Expect = 4.770e-110
Identity = 170/305 (55.74%), Postives = 220/305 (72.13%), Query Frame = 1
Query:    7 ILEFTTGESDAGDRLDQYLVRCLPDRSRSIIQDWIESGLVMVAGGPRKSSFRLKANQEILVEVPPLEPADPEPEN-IPLDVLYEDEHILVLNKQKGLVIHPAPSNLTGTLVNALLYHCRDLSGIRGVEKPGIVHRLDKDTTGVMVVAKHDVAHLSLTTQFADRTVLKIYEAIAHGHPSPSKGTVNQPVGRHTVDRIRMSVNSKGKTAITDYEVHEEFFYREQRYSRIELHLHTGRTHQIRVHMAHLGHPLVGDPLYGKRPNPWGMEGQALHCKRLGFAHPVSHKPLEFEARPHEEYMTVLKALRG 918
            +LE    E   G RLDQYL   L D SRS+IQDWI+ G VM+     K+S ++K  Q++L+EVPPL PADP P++ IPL+V+YEDEHILV+NKQ+GLV+HP   N  GTLVNALL H  D +GIRGV KPGIVHRLDK+T+G+MV AKHD A + L  QF DR V K+Y A+  G P P +G ++QP+ R+  DRI+M+V + GKTAI+DY+V EE       ++ +E+ LHTGRTHQIRVH+A LG+P+V D LYG+    +G+ GQALHC RLGFAHPV  KP+EFEA P E++    +A++ 
Sbjct:    1 MLELAVAEGYEGLRLDQYLAGQL-DYSRSLIQDWIKGGRVMLDFRQVKASSKVKPGQQVLIEVPPLTPADPLPDDSIPLNVVYEDEHILVINKQRGLVVHPGIGNPDGTLVNALLAHAADWAGIRGVLKPGIVHRLDKNTSGLMVCAKHDQACVGLQNQFRDREVHKVYRALVWGVPHPKRGRIHQPIARNPRDRIKMAVVAGGKTAISDYDVLEELG---SNHALVEILLHTGRTHQIRVHLAWLGYPIVADTLYGRPRQTYGLSGQALHCCRLGFAHPVGGKPMEFEAEPPEDFQNAQRAMKS 301          
BLAST of mRNA_P-wetherbeei_contig17917.1.1 vs. uniprot
Match: A0A6N7IS35_9FIRM (Pseudouridine synthase n=3 Tax=Eubacteriales TaxID=186802 RepID=A0A6N7IS35_9FIRM)

HSP 1 Score: 307 bits (786), Expect = 7.060e-101
Identity = 162/294 (55.10%), Postives = 202/294 (68.71%), Query Frame = 1
Query:   34 DAGDRLDQYLVRCLPDRSRSIIQDWIESGLVMVAGGPRKSSFRLKANQEILVEVPPLEPADPEPENIPLDVLYEDEHILVLNKQKGLVIHPAPSNLTGTLVNALLYHCRDLSGIRGVEKPGIVHRLDKDTTGVMVVAKHDVAHLSLTTQFADRTVLKIYEAIAHGHPSPSKGTVNQPVGRHTVDRIRMSVNSKGKTAITDYEVHEEFFYREQRYSRIELHLHTGRTHQIRVHMAHLGHPLVGDPLYGKRPNPWGMEGQALHCKRLGFAHPVSHKPLEFEARPHEEYMTVLKALR 915
            +AG RLD +L    PD SRS IQ  IE GLV V GGP ++ +R+KA  E+LVE+PP       PE+IPLD+ YED  ++V+NK +G+V HPA  N +GTLVNALLYHCRDLSG+ GV +PGIVHRLDKDT+G+++VAK+D AHL L  Q  DR V + Y A+AHG     +GTV+ P+GRH  DR RM+V + G+ A+T Y V E F     +Y+ +EL L TGRTHQIRVHMAHLGHPLVGD  YG     +G++GQ LH   LGF HP + + LEF A   EE   VL  LR
Sbjct:   13 NAGRRLDVFLAGESPDLSRSHIQKLIEEGLVTVNGGPARAGYRVKAGDEVLVEIPPPRELAVLPEDIPLDIFYEDGDVIVINKPRGMVAHPAEGNYSGTLVNALLYHCRDLSGVNGVLRPGIVHRLDKDTSGLIMVAKNDRAHLDLARQLQDRRVTRRYIALAHGGFKEDRGTVDAPIGRHPRDRQRMAVVAGGRRAVTHYTVRERF----GQYTLLELKLETGRTHQIRVHMAHLGHPLVGDLKYGPARPHFGLQGQFLHAAVLGFVHPGTGEYLEFIAPLPEELQRVLDKLR 302          
BLAST of mRNA_P-wetherbeei_contig17917.1.1 vs. uniprot
Match: A0A1Y3QMU6_9FIRM (Pseudouridine synthase n=1 Tax=Firmicutes bacterium ZCTH02-B6 TaxID=1861639 RepID=A0A1Y3QMU6_9FIRM)

HSP 1 Score: 303 bits (777), Expect = 2.500e-99
Identity = 156/295 (52.88%), Postives = 203/295 (68.81%), Query Frame = 1
Query:   40 GDRLDQYLVRCLPDRSRSIIQDWIESGLVMVAGGPRKSSFRLKANQEILVEVPPLEPADPEPENIPLDVLYEDEHILVLNKQKGLVIHPAPSNLTGTLVNALLYHCRDLSGIRGVEKPGIVHRLDKDTTGVMVVAKHDVAHLSLTTQFADRTVLKIYEAIAHGHPSPSKGTVNQPVGRHTVDRIRMSVNSKGKTAITDYEVHEEFFYREQRYSRIELHLHTGRTHQIRVHMAHLGHPLVGDPLYGKRPNPWGMEGQALHCKRLGFAHPVSHKPLEFEAR--PHEEYMTVLKALRG 918
            G RLD++L       SR+ +Q  I+ GLV V G P  +S +L+  Q + V +PP EPA+ +PE IPLDV+YEDE ++V+NK++G+V+HPA  N  GTLVNALL +C DLSGI G E+PGIVHRLDKDT+G++VVAK+D AH+SL  Q   R  ++ Y AI HG  S  +G ++ P+GRH VDR RM+V   G++A+TDYEV E F      Y+ +   L TGRTHQIRVHMAH+GHP+VGDP+YG R  PW + GQ LH  RLGF HP + + + F A   PH E   VL+ LRG
Sbjct:   14 GQRLDRWLAAAGVGPSRAFVQRLIDGGLVQVEGRPAAASHKLRPGQRVTVYIPPPEPAEAQPEAIPLDVVYEDEDVIVINKRQGMVVHPAAGNRAGTLVNALLAYCPDLSGIGGKERPGIVHRLDKDTSGLLVVAKNDRAHISLARQIQAREAVREYVAIVHGRVSSDRGRIDAPIGRHPVDRKRMAVVPGGRSAVTDYEVLERF----PGYTCVRAKLQTGRTHQIRVHMAHIGHPVVGDPVYGPRRCPWNLNGQCLHAFRLGFRHPRTGEWMSFTAPLPPHME--KVLRDLRG 302          
BLAST of mRNA_P-wetherbeei_contig17917.1.1 vs. uniprot
Match: A0A1W1X1Q0_9CLOT (Pseudouridine synthase n=1 Tax=Clostridium acidisoli DSM 12555 TaxID=1121291 RepID=A0A1W1X1Q0_9CLOT)

HSP 1 Score: 302 bits (773), Expect = 6.590e-99
Identity = 151/302 (50.00%), Postives = 208/302 (68.87%), Query Frame = 1
Query:   13 EFTTGESDAGDRLDQYLVRCLPDRSRSIIQDWIESGLVMVAGGPRKSSFRLKANQEILVEVPPLEPADPEPENIPLDVLYEDEHILVLNKQKGLVIHPAPSNLTGTLVNALLYHCRDLSGIRGVEKPGIVHRLDKDTTGVMVVAKHDVAHLSLTTQFADRTVLKIYEAIAHGHPSPSKGTVNQPVGRHTVDRIRMSVNSKGKTAITDYEVHEEFFYREQRYSRIELHLHTGRTHQIRVHMAHLGHPLVGDPLYGKRPNPWGMEGQALHCKRLGFAHPVSHKPLEFEARPHEEYMTVLKALRG 918
            EF   E++ G RLD Y+   L D+SRS IQD IE+G V V    +KS+++LK    + + +P  +  + E ENI LD+LYED  ++V+NK +G+V+HPAP NL+GTLVNALL+HC+DLSGI GV +PGIVHR+DKDT+G++VVAK+D AH  L  Q  + T+ + Y A+  G  +  +GTV+ P+GRH VDRI+MSV   G+ AIT +EV E F    +  + ++  L TGRTHQIRVHM H+GHP+VGDP+YG +   + +EGQ LH K+LGF HP S K +EFE++    +  V+  LR 
Sbjct:    5 EFKVEENEEGTRLDVYISSKLEDKSRSYIQDVIEAGNVKVNDKQKKSNYKLKIKDYVTLIMPENKELEVEKENITLDILYEDSDVIVVNKPQGMVVHPAPGNLSGTLVNALLFHCKDLSGINGVNRPGIVHRIDKDTSGILVVAKNDNAHQKLAEQLKEHTMTREYIALVEGVINSDEGTVDAPLGRHPVDRIKMSVIKNGRNAITHFEVLERF----KANTLVKCILETGRTHQIRVHMTHIGHPIVGDPVYGYKKQKFKLEGQLLHAKKLGFIHPSSDKYMEFESQMPNYFTKVINVLRN 302          
BLAST of mRNA_P-wetherbeei_contig17917.1.1 vs. uniprot
Match: UPI001F420C41 (RluA family pseudouridine synthase n=1 Tax=Clostridium hydrogenum TaxID=2855764 RepID=UPI001F420C41)

HSP 1 Score: 300 bits (768), Expect = 3.090e-98
Identity = 145/301 (48.17%), Postives = 207/301 (68.77%), Query Frame = 1
Query:   10 LEFTTGESDAGDRLDQYLVRCLPDRSRSIIQDWIESGLVMVAGGPRKSSFRLKANQEILVEVPPLEPADPEPENIPLDVLYEDEHILVLNKQKGLVIHPAPSNLTGTLVNALLYHCRDLSGIRGVEKPGIVHRLDKDTTGVMVVAKHDVAHLSLTTQFADRTVLKIYEAIAHGHPSPSKGTVNQPVGRHTVDRIRMSVNSKGKTAITDYEVHEEFFYREQRYSRIELHLHTGRTHQIRVHMAHLGHPLVGDPLYGKRPNPWGMEGQALHCKRLGFAHPVSHKPLEFEARPHEEYMTVLKAL 912
            ++F   E +   RLD ++   + D+SR+ IQ+ I+ G V++ G  +KS+++LK N  +   +P  E  D EPENIPLDVLYED+ ++V+NK +G+V+HPAP N TGTLVNALLYHC DLSGI GV +PGIVHR+DKDT+G++VVAK+D AH SL  Q  + ++ ++Y A+  G      GTV++P+GRH VDRI+M+V   G+ A+T Y V E +       + IE  L TGRTHQIRVHMA++GHP+VGDP+YG +   + ++GQ LH ++LGF HP +   +EF +   + +  +LK L
Sbjct:    4 MKFLVEEDEVNLRLDVFIAGKMEDKSRAYIQNLIKEGNVVIFGKVKKSNYKLKLNDVVEFSIPDNEKLDVEPENIPLDVLYEDKDVIVVNKPQGMVVHPAPGNYTGTLVNALLYHCTDLSGINGVLRPGIVHRIDKDTSGILVVAKNDAAHNSLAAQLKEHSMNRVYNALVEGVIKEDSGTVDKPIGRHPVDRIKMAVVKDGRHAVTHYNVLERYANN----TLIECKLETGRTHQIRVHMAYIGHPIVGDPVYGYKKQKFNLQGQMLHARKLGFIHPSTGNYIEFSSELPDYFKKILKLL 300          
BLAST of mRNA_P-wetherbeei_contig17917.1.1 vs. uniprot
Match: UPI001E3A1DF1 (RluA family pseudouridine synthase n=1 Tax=Clostridium guangxiense TaxID=1662055 RepID=UPI001E3A1DF1)

HSP 1 Score: 300 bits (768), Expect = 3.410e-98
Identity = 145/302 (48.01%), Postives = 207/302 (68.54%), Query Frame = 1
Query:    7 ILEFTTGESDAGDRLDQYLVRCLPDRSRSIIQDWIESGLVMVAGGPRKSSFRLKANQEILVEVPPLEPADPEPENIPLDVLYEDEHILVLNKQKGLVIHPAPSNLTGTLVNALLYHCRDLSGIRGVEKPGIVHRLDKDTTGVMVVAKHDVAHLSLTTQFADRTVLKIYEAIAHGHPSPSKGTVNQPVGRHTVDRIRMSVNSKGKTAITDYEVHEEFFYREQRYSRIELHLHTGRTHQIRVHMAHLGHPLVGDPLYGKRPNPWGMEGQALHCKRLGFAHPVSHKPLEFEARPHEEYMTVLKAL 912
            +L+F         RLD YL   + D+SRS IQ+ I SG   V GG +K S++L+ N EI VE+P  E  + EPENIP+D++YED  ++V+NK +G+V+HPAP N TGTLVNALLYHC DLSGI G+ +PGIVHR+DKDT+G++VVAK+D+AH  L  Q  + ++ +IY A+  G      GT+++P+GRH   RI+M+V   G+ A+T Y+V   +    +  + IE  L TGRTHQIRVHMA++GHP+VGDP+YG     + + GQ LH K+LGF HP+++K +EF++   E +  V++ +
Sbjct:    3 MLKFVVDSYSEDLRLDVYLSENIKDKSRSYIQNLIRSGKASVCGGIKKGSYKLRLNDEIEVEIPENEKLNVEPENIPIDIIYEDSDVIVVNKPQGMVVHPAPGNYTGTLVNALLYHCTDLSGINGILRPGIVHRIDKDTSGILVVAKNDMAHKKLAEQLKEHSMNRIYNALVEGVIKEDTGTIDKPLGRHPNQRIKMAVVKNGRRAVTHYKVLNRY----KNNTLIECKLETGRTHQIRVHMAYMGHPIVGDPIYGYSKQKFKLNGQLLHAKKLGFIHPLTNKYMEFDSELPEYFKKVIEII 300          
BLAST of mRNA_P-wetherbeei_contig17917.1.1 vs. uniprot
Match: A0A4Q4JJG9_9BACL (Pseudouridine synthase n=1 Tax=Sporolactobacillus sp. THM7-7 TaxID=2511172 RepID=A0A4Q4JJG9_9BACL)

HSP 1 Score: 298 bits (764), Expect = 1.470e-97
Identity = 152/307 (49.51%), Postives = 211/307 (68.73%), Query Frame = 1
Query:    1 TEILEFTTGESDAGDRLDQYLVRCLPDRSRSIIQDWIESGLVMVAGGPRKSSFRLKANQEILVEVPPLEPADPEPENIPLDVLYEDEHILVLNKQKGLVIHPAPSNLTGTLVNALLYHCRDLSGIRGVEKPGIVHRLDKDTTGVMVVAKHDVAHLSLTTQFADRTVLKIYEAIAHGHPSPSKGTVNQPVGRHTVDRIRMSVNSK-GKTAITDYEVHEEFFYREQRYSRIELHLHTGRTHQIRVHMAHLGHPLVGDPLYG-KRPNPWGMEGQALHCKRLGFAHPVSHKPLEFEARPHEEYMTVLKALR 915
            T++    TG SD G R+D++    L   SRS +Q  I+ G V + G   K+++R++A +EI ++VP  EP   +PEN+PLD+ YED  ++V+NK +G+V+HPAP +LTGTLVNALLYHC DLSGI GV +PGIVHR+DKDT+G+++VAK D AH SL  Q  D+T  ++Y AI HG     KGT++ P+GR T DR +M+V  + GK A+T ++V E F    + Y+ +   L TGRTHQIRVHMA++GHPL GDP YG K+  P  +EGQALH   LGF HPV+ + + F+A P +++  +L  LR
Sbjct:    2 TDLKIIATG-SDEGKRIDKWAAERLRCESRSRLQQLIKEGHVRINGAKVKANYRIRAGEEIRIQVPEAEPLHVQPENLPLDIAYEDGSVIVVNKPRGMVVHPAPGHLTGTLVNALLYHCHDLSGINGVLRPGIVHRIDKDTSGLLMVAKTDEAHRSLAEQLKDKTTRRLYLAIVHGRLPDDKGTIDAPIGRSTADRKKMAVTDRNGKRAVTHFKVLERF----RHYTYLSCRLETGRTHQIRVHMAYIGHPLAGDPKYGPKKTLP--IEGQALHAAELGFTHPVTREFMHFQAPPPDDFARILAKLR 301          
BLAST of mRNA_P-wetherbeei_contig17917.1.1 vs. uniprot
Match: A0A511V4L5_9BACL (Pseudouridine synthase n=1 Tax=Aneurinibacillus danicus TaxID=267746 RepID=A0A511V4L5_9BACL)

HSP 1 Score: 298 bits (762), Expect = 3.370e-97
Identity = 153/302 (50.66%), Postives = 211/302 (69.87%), Query Frame = 1
Query:   13 EFTTGESDAGDRLDQYLVRCLPDRSRSIIQDWIESGLVMVAGGPRKSSFRLKANQEILVEVPPLEPADPEPENIPLDVLYEDEHILVLNKQKGLVIHPAPSNLTGTLVNALLYHCRDLSGIRGVEKPGIVHRLDKDTTGVMVVAKHDVAHLSLTTQFADRTVLKIYEAIAHGHPSPSKGTVNQPVGRHTVDRIRMSVNSK-GKTAITDYEVHEEFFYREQRYSRIELHLHTGRTHQIRVHMAHLGHPLVGDPLYGKRPNPWGMEGQALHCKRLGFAHPVSHKPLEFEA---RPHEEYMTVLK 906
            ++T    DAG+R+D++L     D SRS +Q WI+ GL+ V G P K ++RL+ + E+ + VPP    D +PEN+PLDV+YED  ++V+NK +GLV+HPAP + +GTLVNALLYHCRDLSGI GV +PGIVHR+DKDT+G+++VAK+D AH SL  Q  D TV + Y A+ HG     KGT++ P+GR   +R +M+V  +  K A++ + V E F    + Y+ +EL L TGRTHQIRVHM ++G+PLVGDP YG + NP+ +EGQALH K LGF HP + + LEF A      E+ +T+LK
Sbjct:   11 DWTIEPEDAGERVDKFLATVQEDWSRSQLQGWIKDGLLTVNGKPVKGNYRLQEDDEVALTVPPAREVDIKPENLPLDVVYEDSDVIVVNKPRGLVVHPAPGHYSGTLVNALLYHCRDLSGINGVLRPGIVHRIDKDTSGLLMVAKNDKAHESLARQLKDHTVTRRYVALVHGVIPHEKGTIDAPIGRDPKNRQQMAVVFEHSKPAVSHFVVLERF----KNYTLVELKLETGRTHQIRVHMKYIGYPLVGDPKYGPK-NPFAIEGQALHAKTLGFTHPTTGEYLEFHAPLPADMEQMITMLK 307          
BLAST of mRNA_P-wetherbeei_contig17917.1.1 vs. uniprot
Match: UPI001EEBF06B (RluA family pseudouridine synthase n=2 Tax=unclassified Clostridium TaxID=2614128 RepID=UPI001EEBF06B)

HSP 1 Score: 296 bits (759), Expect = 7.620e-97
Identity = 149/305 (48.85%), Postives = 204/305 (66.89%), Query Frame = 1
Query:    4 EILEFTTGESDAGDRLDQYLVRCLPDRSRSIIQDWIESGLVMVAGGPRKSSFRLKANQEILVEVPPLEPADPEPENIPLDVLYEDEHILVLNKQKGLVIHPAPSNLTGTLVNALLYHCRDLSGIRGVEKPGIVHRLDKDTTGVMVVAKHDVAHLSLTTQFADRTVLKIYEAIAHGHPSPSKGTVNQPVGRHTVDRIRMSVNSKGKTAITDYEVHEEFFYREQRYSRIELHLHTGRTHQIRVHMAHLGHPLVGDPLYGKRPNPWGMEGQALHCKRLGFAHPVSHKPLEFEARPHEEYMTVLKALRG 918
            E+   +  E     R+D+YL   L D+SRS IQ+ I+S  V+V     KSS++LK N  + VE+P       E ENIPLD++YED+ ++V+NK +G+V+HPAP N TGTLVNALL+HC+DLSGI GV +PGIVHR+DKDT+GV+V+AK+D +H  L+ Q  D ++ + Y A+  G     KGTVN P+GRH  +RI+M++   G+ AIT YEV E +     +Y+ I+ +L TGRTHQIRVHMA +GHPLVGDP+YG +       GQ LH + LGF HP S + +EF +   E +   +K LRG
Sbjct:    2 EVRRLSVNEEFVDMRIDKYLSEVLTDKSRSFIQELIDSKNVLVNEKNIKSSYKLKINDVVSVELPEATNLQVEAENIPLDIIYEDKDVIVVNKPQGMVVHPAPGNYTGTLVNALLFHCKDLSGINGVIRPGIVHRIDKDTSGVLVIAKNDQSHSFLSKQLKDHSMKREYIALVEGRVKELKGTVNAPIGRHPKERIKMAIVEDGREAITHYEVIEVY----DKYTLIKCNLETGRTHQIRVHMAKIGHPLVGDPVYGFKKQKTSTNGQMLHARLLGFIHPTSKEYMEFSSELPEYFQDAIKKLRG 302          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17917.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X9AEC1_9BURK6.670e-12057.76Pseudouridine synthase n=1 Tax=Burkholderiales bac... [more]
A0A7Z9PZS8_9BACT4.770e-11055.74Pseudouridine synthase n=1 Tax=Phycisphaerales bac... [more]
A0A6N7IS35_9FIRM7.060e-10155.10Pseudouridine synthase n=3 Tax=Eubacteriales TaxID... [more]
A0A1Y3QMU6_9FIRM2.500e-9952.88Pseudouridine synthase n=1 Tax=Firmicutes bacteriu... [more]
A0A1W1X1Q0_9CLOT6.590e-9950.00Pseudouridine synthase n=1 Tax=Clostridium acidiso... [more]
UPI001F420C413.090e-9848.17RluA family pseudouridine synthase n=1 Tax=Clostri... [more]
UPI001E3A1DF13.410e-9848.01RluA family pseudouridine synthase n=1 Tax=Clostri... [more]
A0A4Q4JJG9_9BACL1.470e-9749.51Pseudouridine synthase n=1 Tax=Sporolactobacillus ... [more]
A0A511V4L5_9BACL3.370e-9750.66Pseudouridine synthase n=1 Tax=Aneurinibacillus da... [more]
UPI001EEBF06B7.620e-9748.85RluA family pseudouridine synthase n=2 Tax=unclass... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17917contigP-wetherbeei_contig17917:277..1197 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1121936.AUHI01000004_gene1500
Preferred namerluD
PFAMsPseudoU_synth_2,S4
Model size921
Max annot lvl91061|Bacilli
KEGG koko:K06180
Hectar predicted targeting categoryother localisation
GOsGO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360
Exons1
Evalue2.68e-97
EggNOG OGsCOG0564@1|root,COG0564@2|Bacteria,1TPCM@1239|Firmicutes,4HBG2@91061|Bacilli
EC5.4.99.23
DescriptionResponsible for synthesis of pseudouridine from uracil
Cds size921
COG categoryJ
BRITEko00000,ko01000,ko03009
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186130.8727162-CDS-P-wetherbeei_contig17917:276..11971683186130.8727162-CDS-P-wetherbeei_contig17917:276..1197Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17917 277..1197 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17917.1.1prot_P-wetherbeei_contig17917.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig17917 277..1197 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig17917.1.1

>prot_P-wetherbeei_contig17917.1.1 ID=prot_P-wetherbeei_contig17917.1.1|Name=mRNA_P-wetherbeei_contig17917.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=307bp
TEILEFTTGESDAGDRLDQYLVRCLPDRSRSIIQDWIESGLVMVAGGPRK
SSFRLKANQEILVEVPPLEPADPEPENIPLDVLYEDEHILVLNKQKGLVI
HPAPSNLTGTLVNALLYHCRDLSGIRGVEKPGIVHRLDKDTTGVMVVAKH
DVAHLSLTTQFADRTVLKIYEAIAHGHPSPSKGTVNQPVGRHTVDRIRMS
VNSKGKTAITDYEVHEEFFYREQRYSRIELHLHTGRTHQIRVHMAHLGHP
LVGDPLYGKRPNPWGMEGQALHCKRLGFAHPVSHKPLEFEARPHEEYMTV
LKALRG*
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mRNA from alignment at P-wetherbeei_contig17917:277..1197-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig17917.1.1 ID=mRNA_P-wetherbeei_contig17917.1.1|Name=mRNA_P-wetherbeei_contig17917.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=921bp|location=Sequence derived from alignment at P-wetherbeei_contig17917:277..1197- (Phaeothamnion wetherbeei SAG_119_79)
ACCGAGATCCTCGAATTTACGACGGGGGAGAGCGACGCGGGCGACCGCCT CGACCAGTATCTGGTGCGCTGTCTGCCCGATCGCAGCCGTTCCATCATCC AGGACTGGATCGAGAGCGGCCTGGTCATGGTGGCCGGCGGCCCTCGCAAG TCGAGCTTCCGCCTCAAAGCCAATCAGGAAATTCTGGTCGAGGTACCGCC TCTCGAGCCGGCCGATCCGGAACCTGAAAATATCCCCCTCGACGTGCTCT ATGAAGACGAGCACATCCTGGTCCTCAATAAGCAAAAGGGTCTGGTGATA CATCCGGCGCCCTCCAATCTGACGGGCACCCTCGTAAACGCGCTGCTCTA CCACTGCCGCGACCTGTCGGGGATCCGAGGCGTCGAGAAGCCGGGCATCG TGCATCGCCTCGACAAAGACACCACGGGCGTCATGGTCGTCGCCAAACAC GATGTGGCCCATCTGAGCCTCACCACCCAGTTTGCTGACCGCACGGTGCT GAAAATCTACGAGGCGATTGCCCACGGCCATCCCAGCCCGTCCAAGGGCA CCGTCAATCAGCCCGTCGGCCGTCACACCGTGGACCGCATCCGCATGTCG GTGAATTCCAAAGGCAAGACGGCCATCACTGACTACGAGGTCCACGAAGA GTTCTTCTATCGCGAGCAGCGCTATTCGCGTATCGAACTGCATCTGCACA CGGGCCGCACGCATCAGATCCGGGTTCACATGGCGCATCTGGGCCATCCG TTGGTGGGGGATCCGCTCTACGGCAAACGCCCCAATCCCTGGGGCATGGA GGGCCAGGCCCTGCACTGCAAACGGCTGGGTTTTGCCCACCCCGTCAGCC ATAAGCCGCTCGAATTCGAAGCTCGTCCTCACGAGGAATATATGACCGTT CTCAAAGCGCTGCGTGGATAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig17917:277..1197-

>mRNA_P-wetherbeei_contig17917.1.1 ID=mRNA_P-wetherbeei_contig17917.1.1|Name=mRNA_P-wetherbeei_contig17917.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=921bp|location=Sequence derived from alignment at P-wetherbeei_contig17917:277..1197- (Phaeothamnion wetherbeei SAG_119_79)
ACCGAGATCCTCGAATTTACGACGGGGGAGAGCGACGCGGGCGACCGCCT
CGACCAGTATCTGGTGCGCTGTCTGCCCGATCGCAGCCGTTCCATCATCC
AGGACTGGATCGAGAGCGGCCTGGTCATGGTGGCCGGCGGCCCTCGCAAG
TCGAGCTTCCGCCTCAAAGCCAATCAGGAAATTCTGGTCGAGGTACCGCC
TCTCGAGCCGGCCGATCCGGAACCTGAAAATATCCCCCTCGACGTGCTCT
ATGAAGACGAGCACATCCTGGTCCTCAATAAGCAAAAGGGTCTGGTGATA
CATCCGGCGCCCTCCAATCTGACGGGCACCCTCGTAAACGCGCTGCTCTA
CCACTGCCGCGACCTGTCGGGGATCCGAGGCGTCGAGAAGCCGGGCATCG
TGCATCGCCTCGACAAAGACACCACGGGCGTCATGGTCGTCGCCAAACAC
GATGTGGCCCATCTGAGCCTCACCACCCAGTTTGCTGACCGCACGGTGCT
GAAAATCTACGAGGCGATTGCCCACGGCCATCCCAGCCCGTCCAAGGGCA
CCGTCAATCAGCCCGTCGGCCGTCACACCGTGGACCGCATCCGCATGTCG
GTGAATTCCAAAGGCAAGACGGCCATCACTGACTACGAGGTCCACGAAGA
GTTCTTCTATCGCGAGCAGCGCTATTCGCGTATCGAACTGCATCTGCACA
CGGGCCGCACGCATCAGATCCGGGTTCACATGGCGCATCTGGGCCATCCG
TTGGTGGGGGATCCGCTCTACGGCAAACGCCCCAATCCCTGGGGCATGGA
GGGCCAGGCCCTGCACTGCAAACGGCTGGGTTTTGCCCACCCCGTCAGCC
ATAAGCCGCTCGAATTCGAAGCTCGTCCTCACGAGGAATATATGACCGTT
CTCAAAGCGCTGCGTGGATAA
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