mRNA_P-wetherbeei_contig179.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig179.1.2
Unique NamemRNA_P-wetherbeei_contig179.1.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig179.1.2 vs. uniprot
Match: A0A835YNE1_9STRA (Cactus-binding C-terminus of cactin protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNE1_9STRA)

HSP 1 Score: 502 bits (1292), Expect = 1.080e-169
Identity = 299/517 (57.83%), Postives = 362/517 (70.02%), Query Frame = 1
Query:    1 TNESNPFLDANLDEQFVWRKKVEKTGA--VAPDKREQRLNHVKKVEEIVKVRKRREDTEKXXXXXXXLRAEEARLREQQQYGDWQKKEEEFHLAQAKMRSKIRLVEGREKAIDMMAKNVLLFGETSAEEV---GVKYRSKSQLDTSALEMELREPYRLFEGLSLVELIELQRDIAEYVELE-GDDGPNAAFWRCLAVVCAEELRVAKAREGIEEEALRGVHPSLLSKVHDTLAPLSLDRLGQMAREITSQLEAGAGAAGSXXXXXXXXXLDSDYYGLVLRFIGAYEAKAELRAIHQRMLQRQLDRLEDVRREAPAGXXXXXXXXXXYDEXXXXXXXXXXXXXXXXXXXXXAAGRDESEAAAELYRREAKRGMEDLEDAFGLKDEVDTSGVVYGWGDRYRPRKPRYFNRVKTGYDWNKYNQAHYDHDNPPPKAVQGYKFNIFYPDLVDKSKAPRFVLEPADTNDFVIIRFTAGPPYEDVAFKIVNREWETSRKRGFRVVFDRGVMSVIFNFKRARYRR 1533
            +N+SNPF D+NL+EQF WRKK++K G    A  K++ R  H  K+EEI KVRKRRE++  XXXXXX L+AEEARLREQQQYGDWQ+KEEEFHL QAK RSKIRL+EGRE+ IDM+AKN+L+FGE  A      G+ Y S  +LDTS+LE+ELREPYRL EGLS+ EL EL  D+  Y E+E   +G N AFW  L VVCA+EL  A+   GI   A  G+H ++   V   L      RL ++  ++  +++ G G              D DY+  V + + A+ A+A LRA+H+ MLQRQL+RLE +R E                E      XXXXXXXXXXXXXX  A RD S+AA  L   E  +G+EDLEDA GL DEVDTSG  Y W D+YRPRKPRYFNRVKTGYDWNKYNQ+HYDHDNPPPK VQGYKFN+FYPDL+D+S  P+F LEP+D  D  IIRFTAGPPYED+AFKIVNREWE +RKRGFR VF+RGV+S+ FNFKR RYR+
Sbjct:  123 SNDSNPFGDSNLEEQFTWRKKLDKEGTDPAAVTKKQLRDAHQAKLEEIEKVRKRREESXXXXXXXXRLKAEEARLREQQQYGDWQRKEEEFHLHQAKTRSKIRLIEGRERPIDMVAKNLLIFGEAPAGPGVGGGIHYSSGRELDTSSLEIELREPYRLCEGLSVAELEELAADVRAYQEMEDAQEGANRAFWAALGVVCADELARAQEAAGIVPAAA-GLHKNVRGDVAALLEGRDAARLEELREQVDGRVQRGEG--------------DVDYWAAVSQQLRAHAARAALRALHEAMLQRQLERLEALREERARRRAEAIELGEPLPEDLQPAAXXXXXXXXXXXXXX--ADRDASDAALALEVAERGKGLEDLEDAMGLGDEVDTSGTTYWWNDKYRPRKPRYFNRVKTGYDWNKYNQSHYDHDNPPPKTVQGYKFNVFYPDLLDRSVTPQFKLEPSDHPDMAIIRFTAGPPYEDIAFKIVNREWEYARKRGFRCVFERGVLSLFFNFKRHRYRK 622          
BLAST of mRNA_P-wetherbeei_contig179.1.2 vs. uniprot
Match: D7FKP9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKP9_ECTSI)

HSP 1 Score: 460 bits (1184), Expect = 2.110e-153
Identity = 258/517 (49.90%), Postives = 333/517 (64.41%), Query Frame = 1
Query:    1 TNESNPFLDANLDEQFVWRKKVEKTGAVAP--DKREQRLNHVKKVEEIVKVRKRREDTEKXXXXXXXLRAEEARLREQQQYGDWQKKEEEFHLAQAKMRSKIRLVEGREKAIDMMAKNVLLFGETS--AEEVGVKYRSKSQLDTSALEMELREPYRLFEGLSLVELIELQRDIAEYVELEGDDGPNAAFWRCLAVVCAEELRVAKAREGIEEE--ALRGVHPSLLSKVHDTLAPLSLDRLGQMAREITSQLEAGAGAAGSXXXXXXXXXLDSDYYGLVLRFIGAYEAKAELRAIHQRMLQRQLDRLEDVRREAPAGXXXXXXXXXXYDEXXXXXXXXXXXXXXXXXXXXXAAGRDESEAAAELYRREAKRGMEDLEDAFGLKDEVDTSGVVYGWGDRYRPRKPRYFNRVKTGYDWNKYNQAHYDHDNPPPKAVQGYKFNIFYPDLVDKSKAPRFVLEPADTNDFVIIRFTAGPPYEDVAFKIVNREWETSRKRGFRVVFDRGVMSVIFNFKRARYRR 1533
            TN+ NPF D+NL EQFVW KK EK G       KR+ R    K ++EI KVRKRR+D E        L+AEE+RLREQQQYGDWQKKEE+FHL QA  RSKIRLVEGR++ ID +AKNV+LFGE    A EVG+KY  K  +D + LEMELREPY+LF+GL+L EL +LQ +I +Y EL G++GPN  FW  L VVC +++  AK   G  EE  A  G+H +++  V       +++ L +   +I  +L++G  +            +D++++  VL+ +  ++A A+LR +HQ ML+ QL++LE++R    +                   XXXXXXXX            D S  A  +   E  +GM D E+   L DEVD  G  Y W D++RPRKPRYFNRVKTGYDWNKYNQ HYDHDNPPPK VQGYKFN+FYPDL+D+   P++ LE AD   F I+RF AGPPYED+AFKI+NREWE  RKRG+R VF+RGV+S+ FNFK   YR+
Sbjct:  128 TNDINPFGDSNLTEQFVWGKKKEKEGTADKLLTKRDMRDMQKKNIDEIEKVRKRRDDAEAEREEMDRLKAEESRLREQQQYGDWQKKEEQFHLQQASQRSKIRLVEGRDRPIDRLAKNVILFGEQDQGAGEVGIKYGGKGDVDVTGLEMELREPYKLFDGLTLEELEQLQTEILQYQELVGENGPNRDFWLSLGVVCDDKVAKAKELLGETEEGVATGGLHKTVIDDVTAKFENQTVEELAEQKTKIQDKLDSGEAS------------VDTEFWEAVLKELHVFQAMAKLRDVHQVMLEAQLEKLEEMRDNMKSKRA----------SRAEGDXXXXXXXXEGKGPAIATTAADSSALAMGMLANEKSKGMGDQEEGMDLADEVDMGGKTYWWHDKFRPRKPRYFNRVKTGYDWNKYNQTHYDHDNPPPKTVQGYKFNVFYPDLIDREDTPKYFLEKADHPGFAILRFHAGPPYEDIAFKIINREWEFGRKRGYRCVFERGVLSLYFNFKSLWYRK 622          
BLAST of mRNA_P-wetherbeei_contig179.1.2 vs. uniprot
Match: A0A7S2BDL4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BDL4_9STRA)

HSP 1 Score: 446 bits (1146), Expect = 4.790e-149
Identity = 250/521 (47.98%), Postives = 324/521 (62.19%), Query Frame = 1
Query:    1 TNESNPFLDANLDEQFVWRKKVEKTGAVAPDK-----REQRLNHVKKVEEIVKVRKRREDTEKXXXXXXXLRAEEARLREQQQYGDWQKKEEEFHLAQAKMRSKIRLVEGREKAIDMMAKNVLLFGETSAEEVGVKYRSKSQLDTSALEMELREPYRLFEGLSLVELIELQRDIAEYVELEGDDGPNAAFWRCLAVVCAEELRVAKAREGIEEEALR--GVHPSLLSKVHDTLAPLSLDRLGQMAREITSQLEAGAGAAGSXXXXXXXXXLDSDYYGLVLRFIGAYEAKAELRAIHQRMLQRQLDRLEDVRREAPAGXXXXXXXXXXYDEXXXXXXXXXXXXXXXXXXXXX---AAGRDESEAAAELYRREAKRGMEDLEDAFGLKDEVDTSGVVYGWGDRYRPRKPRYFNRVKTGYDWNKYNQAHYDHDNPPPKAVQGYKFNIFYPDLVDKSKAPRFVLEPADTNDFVIIRFTAGPPYEDVAFKIVNREWETSRKRGFRVVFDRGVMSVIFNFKRARYRR 1533
            TNE NPF D NL++QFVW+KKVEKTG     K     R +R +H   + EI KVRKRR D E        LRAEE+RLRE +QY DW KKEE FHL QA++RSKIRLVEGREK ID+MAKN++L G    ++    +      DTS LE+EL EP   F GL++ +L ELQ DI  Y++LE  DGPN +FW  L +V  +E++ A   +   ++A R  G+H +++ ++    A  S D L     +I  ++ +                +D +++   L  +  Y A+AELR  HQ++L++QL RLE  R E              Y E                         A +D S AA ++ R EA +GMEDLE+  GL DEV T   VY W D+YRPRKPRYFNRVKTGY+WNKYNQ HYDHDNPPPK VQGYKFN+FYPDL+D++  PR++LEPADT +F I+RF+AGPPYED+AFKI+NREWE  RKRGF+ VF+RG++ + FNFKR RYR+
Sbjct:   35 TNEENPFGDHNLNQQFVWKKKVEKTGEGDESKLSTKARRERQDHF--LGEIHKVRKRRSDREAEQEEMERLRAEESRLREAEQYADWHKKEESFHLNQARVRSKIRLVEGREKPIDIMAKNLILLGNCDDDDDSALH------DTSQLEVELMEPTAFFRGLNIGDLRELQADIQTYLDLE-KDGPNKSFWSALKLVAKKEVQDASQSDSGIQQANRKAGIHSAVMDELRRKFAAKSSDELTSTHMDIQLRINSN------------DPTIDVEFWEAALEELEVYRARAELREFHQKILKQQLGRLETKREEL-----------RIYREEHPEEMEKPAAGTGKDKAEAEDEPTANQDGSAAAVDMERAEAAKGMEDLEEEMGLADEVGTKDQVYWWQDKYRPRKPRYFNRVKTGYEWNKYNQTHYDHDNPPPKTVQGYKFNVFYPDLIDRTNTPRYILEPADTKEFCILRFSAGPPYEDIAFKIINREWEFGRKRGFKCVFERGILHLYFNFKRHRYRK 523          
BLAST of mRNA_P-wetherbeei_contig179.1.2 vs. uniprot
Match: A0A6S9JR17_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9JR17_HETAK)

HSP 1 Score: 401 bits (1031), Expect = 1.630e-130
Identity = 262/542 (48.34%), Postives = 329/542 (60.70%), Query Frame = 1
Query:    1 TNESNPFLDANLDEQFVWRKKVEKTGAVAPDKREQRLNHVKK-VEEIVKVRKRREDTEKXXXXXXXLRAEEARLREQQQYGDWQKKEEEFHLAQAKMRSKIRLVEGREKAIDMMAKNVLLFG--ETSAEEVG---VKYRSKSQLDTSALEMELREPYRLFEGLSLVELIELQRDIAEYVELEGDDGPN--AAFWRCLAVVCAEELRVAKAREGIEEEALR---------------GVHPSLLSKVHDTLAPLSLDRLGQMAREITSQLEA----GAGAAGSXXXXXXXXXLDSDYYGLVLRFIGAYEAKAELRAIHQRMLQRQLDRLEDVRR----EAPAGXXXXXXXXXXYDEXXXXXXXXXXXXXXXXXXXXXAAGRDESEAAAELYRREAKRGMEDLEDAFGLKDEVDTSGVVYGWGDRYRPRKPRYFNRVKTGYDWNKYNQAHYDHDNPPPKAVQGYKFNIFYPDLVDKSKAPRFVLEPADTNDFVIIRFTAGPPYEDVAFKIVNREWETSRKRGFRVVFDRGVMSVIFNFKRARYRR 1533
            TN+ NP+ D NL +QFVWR+K  K        +   +   +K +EE+            XXXXXXXL+AEE+RLRE QQ+GDWQKKEE+FH  QAK+RSKIRL+E R K ID++AKN+LLF   E   EE+     KY+  + L    LE+ELREPY +F+ L++ EL  LQ DI  Y EL+G +  +  A FW  LA +CA+EL+ A  R G E +A                 G+H ++  +V       S   L +MA ++ ++ EA    G G AG           D +Y+  VL  +  Y AKA LR +HQ MLQ QLDRLE  R+    E  A  XXXXXXXXX D+                         DES  A  + R E  +GM+DLE+A GL+DEV    V Y W D+YRPRKPRYFNRVKTGYDWNKYNQAHYDH+NPPPK VQGYKFNIFYPDL+DKS+ P+F LEPA+ + F +IRFTAGPPYEDVAFKIVNR W   RKRGF   F+RG++++  NF+R  YRR
Sbjct:   97 TNDENPWGDPNLTKQFVWRRKHAKEEPSGNASKTSLVEKRRKTMEEVXXXXXXXXXXXXXXXXXXXLKAEESRLREVQQFGDWQKKEEDFHRYQAKIRSKIRLIEDRAKPIDLLAKNLLLFSGEEXXXEELDGGRCKYKGGTNLSIDHLEVELREPYLIFQDLTVAELRTLQGDIQTYQELQGKEEGSLPARFWGALAAICADELKHATHRAGTEAKAAALGGGGGAAGRDNIKGGMHEAVRGEVEALFGGRSAVYLTKMAGQLAAKAEAARAGGDGGAGG----------DPEYWAAVLEHLAVYRAKATLRELHQHMLQVQLDRLEGRRKRLAEERAARRXXXXXXXXXGDDAGADSDGSYVV--------------DESAEAVAMERAEKAKGMDDLEEALGLQDEVKLDSV-YWWHDKYRPRKPRYFNRVKTGYDWNKYNQAHYDHENPPPKTVQGYKFNIFYPDLIDKSETPKFHLEPAEDDKFCLIRFTAGPPYEDVAFKIVNRAWAYQRKRGFLCKFERGILTLFVNFQRHFYRR 613          
BLAST of mRNA_P-wetherbeei_contig179.1.2 vs. uniprot
Match: A0A8K1CFB0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CFB0_PYTOL)

HSP 1 Score: 385 bits (990), Expect = 5.030e-125
Identity = 235/535 (43.93%), Postives = 326/535 (60.93%), Query Frame = 1
Query:    1 TNESNPFLDANLDEQFVWRKKVE----------------KTGAVAPDKREQRLNHVKKVEEIVKVRKRREDTEKXXXXXXXLRAEEARLREQQQYGDWQKKEEEFHLAQAKMRSKIRLVEGREKAIDMMAKNVLLFGETSAEEVGVKYRSKSQLDTSALEMELREPYRLFEGLSLVELIELQRDIAEYVELEGDDGP---NAAFWRCLAVVCAEELRVAKAREGIEEEALRG-----VHPSLLSKVHDTLAPLSLDRLGQMAREITSQLEAGAGAAGSXXXXXXXXXLDSDYYGLVLRFIGAYEAKAELRAIHQRMLQRQLDRLEDVRREAPAGXXXXXXXXXXYDEXXXXXXXXXXXXXXXXXXXXXAAGRDESEAAAELYRREAKRGMEDLEDAFGLKDEVDTSGVVYGWGDRYRPRKPRYFNRVKTGYDWNKYNQAHYDHDNPPPKAVQGYKFNIFYPDLVDKSKAPRFVLEPADTNDFVIIRFTAGPPYEDVAFKIVNREWETSRKRGFRVVFDRGVMSVIFNFKRARYRR 1533
            TNE+NPF D+NL + FVWRKK E                   A  P ++E + N + +VEEI K R+RRE+ E+ XXXXXXLR EE RLR+ +QY DWQ+KEEEFH  Q K+RSK+R+ + REK +D++AKN+LL      E+       +       + +E R P+ + E LS+ EL +L+ DI  Y++LE        N  FW  + VV  + +R  +  +    E +RG     +H S+   + + L+  +   L ++  E+ + +E+ A   G          +D +++  V + IG Y+A+A L  +H  ML    D+L+D+ ++              +D         XXXXXXXXX    +  RD+S  A  L  +EA++G+E+ E+  G  DEV   G +  W D+Y+PRKPRYFNRVKTGYDWNKYNQ HYDHDNPPPK VQGYKFN+FYPDL+DK+ APRFVLE +++++F IIRFTAGPPY+D+AFKIVNREWE S KRGF+ VF+RG++ + FNFKR RYRR
Sbjct:   62 TNETNPFGDSNLTQPFVWRKKYEGGSDASXXXXXXXXXXXXXASRPSEKELKRNQLARVEEIRKARQRREEREREXXXXXXLRQEEMRLRDAEQYEDWQQKEEEFHRTQTKVRSKLRIQQRREKPVDLLAKNLLLADHAMQED------EEDDFYRRGVRVETRRPHAIVEVLSMDELEDLREDIRAYLDLEESRNTGKTNKEFWDLMMVVTRDRIRRLRRSQSEASEDVRGRERGAIHDSVNDTIEEMLSGKNTSELDKLKDEVEATIESAATTPG----------VDVEFWEEVAQQIGVYKARARLTELHDDML----DKLKDLIKQ--------------HDTAAASQGDRXXXXXXXXXDRDPSDLRDDSAEARALEHQEAEKGLEESEEKLGTADEVALEGKLPSWSDKYQPRKPRYFNRVKTGYDWNKYNQTHYDHDNPPPKVVQGYKFNLFYPDLIDKTAAPRFVLEKSNSSEFCIIRFTAGPPYQDIAFKIVNREWEYSHKRGFKSVFERGILHLYFNFKRHRYRR 562          
BLAST of mRNA_P-wetherbeei_contig179.1.2 vs. uniprot
Match: W2QKY9_PHYPN (Uncharacterized protein n=7 Tax=Phytophthora TaxID=4783 RepID=W2QKY9_PHYPN)

HSP 1 Score: 379 bits (973), Expect = 8.640e-123
Identity = 225/520 (43.27%), Postives = 315/520 (60.58%), Query Frame = 1
Query:    1 TNESNPFLDANLDEQFVWRKKVEKTGAVAPDKREQRLNHVKKVEEIVKVRKRREDTEKXXXXXXXLRAEEARLREQQQYGDWQKKEEEFHLAQAKMRSKIRLVEGREKAIDMMAKNVLLFGETSAEEVGVKYRSKSQLDTSALEMELREPYRLFEGLSLVELIELQRDIAEYVELE--GDDGPNAAFWRCLAVVCAEELRVAKAREGIEEEALRG-VHPSLLSKVHDTLAPLSLDRLGQMAREITSQL-EAGAGAAGSXXXXXXXXXLDSDYYGLVLRFIGAYEAKAELRAIHQRMLQRQLDRLEDVRR---EAPAGXXXXXXXXXXYDEXXXXXXXXXXXXXXXXXXXXXAAGRDESEAAAELYRREAKRGMEDLEDAFGLKDEV--DTSGVVYGWGDRYRPRKPRYFNRVKTGYDWNKYNQAHYDHDNPPPKAVQGYKFNIFYPDLVDKSKAPRFVLEPADTNDFVIIRFTAGPPYEDVAFKIVNREWETSRKRGFRVVFDRGVMSVIFNFKRARYRR 1533
            ++E+NPF D++L + FVW KK E  G   P  RE +   +++V+EI K RKRRE+ E  XXXXX L++EE RL++ +QY DWQ+KEE+FHL QAK+RS++R+   REK +D++AKN+LL       +   ++  K   +   + +E R P+ + E LS+ EL ELQ D+  Y ELE  G+ G NA FW+ + +VC + +R  K  +  E +A RG +H S+   + + L       L ++  E+   +  A  GA G          +D D++  V + I  Y+A+A L  +H+ ML +  D +E+  R   E  A            DE                       GRD    A E+ +  A++G+++ E+  G  +EV    S V   W ++Y+PRKPRYFNRVKTGYDWNKYNQ HYD DNPPPK+VQGYKFN+FYPDL+DK  APRF LE  ++++F IIRF+AGPPY+D+AFKIVNREWE S KRGF+ VF+RGV+ + FNFKR RYRR
Sbjct:   55 SDETNPFGDSSLSQPFVWGKKYEDKGKEKPTARELKKQQLRRVDEIRKARKRREEREAEXXXXXRLKSEEMRLKDAEQYEDWQQKEEQFHLKQAKVRSQLRIRANREKPVDLLAKNLLLVSAKHGADDEDEFFKK---EIGRIRVEHRRPHAVVEVLSMDELKELQEDVRTYEELEESGNGGHNAEFWKLMRLVCDDRIRRLKKSQS-EGQAGRGAIHDSVNETIEEMLDGKDKQELIKLQGEVKETIASASNGATG----------VDVDFWEEVTQQIQVYQARARLTELHEEMLTKLADLMEEHERRTAEEAAARAAEDEKHGVVDED----------------------GRDAGREAREMEKEFARKGLDEEEERLGASEEVVLADSKVTPRWSEKYQPRKPRYFNRVKTGYDWNKYNQTHYDRDNPPPKSVQGYKFNLFYPDLIDKQTAPRFFLEKTNSDEFCIIRFSAGPPYQDIAFKIVNREWEYSHKRGFKSVFERGVLHLYFNFKRHRYRR 538          
BLAST of mRNA_P-wetherbeei_contig179.1.2 vs. uniprot
Match: A0A6A4CAN4_9STRA (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A4CAN4_9STRA)

HSP 1 Score: 376 bits (966), Expect = 1.130e-121
Identity = 221/519 (42.58%), Postives = 309/519 (59.54%), Query Frame = 1
Query:    1 TNESNPFLDANLDEQFVWRKKVEKTGAVAPDKREQRLNHVKKVEEIVKVRKRREDTEKXXXXXXXLRAEEARLREQQQYGDWQKKEEEFHLAQAKMRSKIRLVEGREKAIDMMAKNVLLFGETSAEEVGVKYRSKSQLDTSALEMELREPYRLFEGLSLVELIELQRDIAEYVELE--GDDGPNAAFWRCLAVVCAEELRVAKAREGIEEEALRGVHPSLLSKVHDTLAPLSLDRLGQMAREITSQL-EAGAGAAGSXXXXXXXXXLDSDYYGLVLRFIGAYEAKAELRAIHQRMLQRQLDRLEDVRR---EAPAGXXXXXXXXXXYDEXXXXXXXXXXXXXXXXXXXXXAAGRDESEAAAELYRREAKRGMEDLEDAFGLKDEVDT--SGVVYGWGDRYRPRKPRYFNRVKTGYDWNKYNQAHYDHDNPPPKAVQGYKFNIFYPDLVDKSKAPRFVLEPADTNDFVIIRFTAGPPYEDVAFKIVNREWETSRKRGFRVVFDRGVMSVIFNFKRARYRR 1533
            ++E+NPF D++L + FVW KK E  GA  P  R+ +   +++V+EI K RKRRE    XXXXXX L++EE RL++ +QY DWQ+KEE+FHL QAK+RS++R+   REK +D++AKN+LL    S E+   ++  +   +   + +E R P+ + E L++ EL ELQ D+A Y ELE  G+ G NA FW  + +VC + +R     +    E    +H S+   +   L     D L ++  E+   +  A  GA G          +D D++  V   I   +A+A L  +H+ ML +  D +E+  R   E  A            DE                       GRD S  A E+ +  A++ +++ E+     +EV    S     W ++Y+PRKPRYFNRVKTGYDWNKYNQ HYDHDNPPPK VQGYKFN+FYPDL+DK  APRF LE +++++F IIRF+AGPPY+D+AFKIVNREWE S KRGF+ VF+RGV+ + FNFKR RYRR
Sbjct:   60 SDETNPFGDSSLSQPFVWGKKYEGQGAAEPSARDLKKQQLRRVDEIRKARKRREXXXXXXXXXXRLKSEELRLKDAEQYEDWQQKEEQFHLKQAKVRSQLRIRANREKPVDLLAKNLLLVSAKSGEQDEDEFFKR---EIGRIRVEHRRPHAIVEVLAMDELRELQEDVATYEELEQSGNGGHNAEFWTLMKLVCDDRIRRLTRAQSEGREGRGAIHDSVNETIEQMLDGKDADALNKLQDEVKETIASASNGATG----------VDVDFWEEVAMQIRVCQARARLTELHEEMLNKLSDLMEEHERRTAEEAAARAAEDEMHGVVDEN----------------------GRDASREAREMEKSFARKELDETEEKLDASEEVTLADSKAAPRWSEKYQPRKPRYFNRVKTGYDWNKYNQTHYDHDNPPPKVVQGYKFNLFYPDLIDKQTAPRFFLEKSNSDEFCIIRFSAGPPYQDIAFKIVNREWEYSHKRGFKSVFERGVLHLYFNFKRHRYRR 543          
BLAST of mRNA_P-wetherbeei_contig179.1.2 vs. uniprot
Match: A0A7S2KTJ2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KTJ2_9STRA)

HSP 1 Score: 369 bits (946), Expect = 6.920e-120
Identity = 219/483 (45.34%), Postives = 282/483 (58.39%), Query Frame = 1
Query:  127 VEEIVKVRKRREDTEKXXXXXXXLRAEEARLREQQQYGDWQKKEEEFHLAQAKMRSKIRLVEGREKAIDMMAKNVLLFGET---SAEEVGVKYRSKSQL--DTSALEMELREPYRLFEGLSLVELIELQRDIAEYVELE-----GDDGPNAAF---WRCLAVVCAEELRVAKAREGIEEEALRGVHPSLLSKVHDTLAPLSLDRLGQMAREITSQLEAGAGAAGSXXXXXXXXXLDSDYYGLVLRFIGAYEAKAELRAIHQRMLQRQLDRLEDVRREAPAGXXXXXXXXXXYDEXXXXXXXXXXXXXXXXXXXXXAAGRDESEAAAELYRREAKRGME-DLEDAFGLKDEVDTSGVVYGWGDRYRPRKPRYFNRVKTGYDWNKYNQAHYDHDNPPPKAVQGYKFNIFYPDLVDKSKAPRFVLEPADTNDFVIIRFTAGPPYEDVAFKIVNREWETSRKRGFRVVFDRGVMSVIFNFKRARYRR 1533
            +EEI KVR RR++ E        L+AEE+R+RE Q Y +WQKKEEEFHL Q + RS IRLV+GREK ID++AKN+LLFG T   S E+  VKY+ K     D S+LE EL EP+     L L EL EL  D+ EY +LE      ++G NA F   W  L VV  +E++       +      G H  +   +H      +   +  +  EI S++  G               +D+DY+  +L  +G ++AKA L  IH  ML RQL++LE  R E  +                                   A+  D+ E   ++    + +  E +L++A GL DEVD     Y W ++YRPRKPRYFNRV+TGYDWNKYNQ HYDHDNPPPK VQGYKFNIFYPDLVDKSK P++ LEPAD+N+F IIRF+AG PYEDVAFKI+NREW  SRKRGF+ VF+RGV+S+ FNF    YRR
Sbjct:   12 IEEIKKVRARRQEREDAFEERERLKAEESRMREMQNYDEWQKKEEEFHLHQQRQRSAIRLVQGREKPIDVLAKNLLLFGLTEMESQEKRAVKYQEKYNALEDLSSLEAELTEPHIFLRDLKLNELEELLIDVQEYYQLEKESSQDENGANATFLDYWGALLVVIQDEIKY------LNTGGSGGSHEIVAKDIHKMFENQTTSAIHALKTEIESKIRNGGAG------------IDTDYWYSILEQLGVHQAKASLSEIHSTMLLRQLEKLEKRREELGS-----------------------QQHLKKEDNETKASAGDDDETEQKVDNGLSLQFPEGNLDEALGLSDEVDLGSGTYRWQEKYRPRKPRYFNRVRTGYDWNKYNQTHYDHDNPPPKTVQGYKFNIFYPDLVDKSKTPQYFLEPADSNEFCIIRFSAGAPYEDVAFKIINREWNKSRKRGFKCVFERGVLSLFFNFNTHWYRR 453          
BLAST of mRNA_P-wetherbeei_contig179.1.2 vs. uniprot
Match: A0A6G0WF12_9STRA (KIX domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WF12_9STRA)

HSP 1 Score: 362 bits (928), Expect = 2.430e-116
Identity = 220/517 (42.55%), Postives = 292/517 (56.48%), Query Frame = 1
Query:    1 TNESNPFLDANLDEQFVWRKKV--EKTGAVAPDKREQRLNHVKKVEEIVKVRKRREDTEKXXXXXXXLRAEEARLREQQQYGDWQKKEEEFHLAQAKMRSKIRLVEGREKAIDMMAKNVLLFGETSAEEVGVKYRSKSQLDTSA----LEMELREPYRLFEGLSLVELIELQRDIAEYVELEGDDGPNAAFWRCLAVVCAEELRVAKAREGIEEEALRGVHPSLLSKVHDTLAPLSLDRLGQMAREITSQLEAGAGAAGSXXXXXXXXXLDSDYYGLVLRFIGAYEAKAELRAIHQRMLQRQLDRLEDVRREAPAGXXXXXXXXXXYDEXXXXXXXXXXXXXXXXXXXXXAAGRDESEAAAELYRREAKRGMEDLEDAFGLKDEVDTSGVVYGWGDRYRPRKPRYFNRVKTGYDWNKYNQAHYDHDNPPPKAVQGYKFNIFYPDLVDKSKAPRFVLEPADTNDFVIIRFTAGPPYEDVAFKIVNREWETSRKRGFRVVFDRGVMSVIFNFKRARYRR 1533
            +NE NPF D+ L E+FVW K +  EK    + D RE        V EIVKVRKRR++ E        LR EE R+ E   + DWQ+KEEEFHL+QA++RS IR+ EGREK +D++AKN++L   TS   V +   +K+  DT A     ++ELR P  L   L    L EL+ +I  Y+ELEG  G +  FW+ L V+C  E+    +R   +      VH  + + +H+ L   S   LG +  EI   + +GA              +D +YY  VL+ I  Y+AKA LR IH   +Q+  DR++     A             Y +                     A   D S  A  +   E ++GMED E+ F +  E+  S     W ++YRPRKPR+FNRVKTGYDWNKYNQ HYD DNPPPK VQGYKF IFYPDL+DK+ AP++  E AD+ +F I+RF AGPPY D+AFK+VN EWE S KRGF+ VF+RG++ + FNFKR RYRR
Sbjct:   39 SNEQNPFNDSKLTEKFVWHKNLTREKERQASDDVREDL------VREIVKVRKRRDEREAEYDELNRLREEERRMMESSSFEDWQQKEEEFHLSQARVRSHIRIREGREKPVDLLAKNLML---TSKSAVAMIDPTKAVDDTLAQLKHAQVELRPPETLLANLDPKALSELKDEIQVYMELEGRKGEHFEFWKLLHVLCTYEI----SRHHKQHSGRGAVHRDVEASIHEMLEGKSPSELGDLKSEIEETISSGASG------------IDVEYYEHVLQEIQVYQAKARLREIHNSHIQKLADRIKQQEENAA------------YRQSQAKKSTDSSTPASSRSEDDIAD--DNSREALAMMEMEKEKGMEDEEEEF-VDQEIVASRQPPAWSNKYRPRKPRFFNRVKTGYDWNKYNQTHYDDDNPPPKIVQGYKFTIFYPDLIDKNVAPKYTFEAADSPEFCILRFHAGPPYLDIAFKVVNLEWEFSHKRGFKCVFERGILHLHFNFKRHRYRR 515          
BLAST of mRNA_P-wetherbeei_contig179.1.2 vs. uniprot
Match: K3X2U2_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X2U2_GLOUD)

HSP 1 Score: 360 bits (925), Expect = 1.500e-115
Identity = 212/514 (41.25%), Postives = 296/514 (57.59%), Query Frame = 1
Query:    1 TNESNPFLDANLDEQFVWRKKVE---KTGAVAPDKREQRLNHVKKVEEIVKVRKRREDTEKXXXXXXXLRAEEARLREQQQYGDWQKKEEEFHLAQAKMRSKIRLVEGREKAIDMMAKNVLLFGETSAEEVGVKYRSKSQLDTSALEMELREPYRLFEGLSLVELIELQRDIAEYVELEGDDGPNAAFWRCLAVVCAEELRVAKAREGIEEEALRGVHPSLLSKVHDTLAPLSLDRLGQMAREITSQLEAGAGAAGSXXXXXXXXXLDSDYYGLVLRFIGAYEAKAELRAIHQRMLQRQLDRLEDVRREAPAGXXXXXXXXXXYDEXXXXXXXXXXXXXXXXXXXXXAAGRDESEAAAELYRREAKRGMEDLEDAFGLKDEVDTSGVVYGWGDRYRPRKPRYFNRVKTGYDWNKYNQAHYDHDNPPPKAVQGYKFNIFYPDLVDKSKAPRFVLEPADTNDFVIIRFTAGPPYEDVAFKIVNREWETSRKRGFRVVFDRGVMSVIFNFKRARYRR 1533
            +N++NPF D+NL + FVW KK E   K  +  P ++E                        XXXXXX L+ EE RLR+ +QY DWQ+KEEEFHL QA++RSK+R+ E RE+ +D++AKN+LL   T  ++    + S    D   + +E R P+ + E LS+ EL+ELQ +I EY++LE  DG N  FW  + ++C + +R  +  +         +H S+   + D L       L  + +++T  + +   +AG          +D +++  V + I  Y A+A L  +H+ ML +  D +E     A AG            +                        RDES  A ++ R EA + +ED+E+  G+ +EV    V   W ++Y+PRKPRYFNRVKTGYDWNKYNQ HYDHDNPPPK VQGYKFN+FYPDL+DK  APRF LE  ++ DF IIRF+AGPPY+D+AFKIVNREWE S KRGF+ VF+RG++ + FNFKR RYRR
Sbjct:   65 SNDTNPFGDSNLSQPFVWGKKYEDGEKKKSSKPSEKELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLKNEELRLRDAEQYEDWQQKEEEFHLNQARVRSKLRIKEKRERPVDLLAKNLLLVAHTMQQDEKDDFLSGGGHD--GVRVETRRPHAIVEVLSMDELLELQDNITEYLDLEESDGENKEFWTLMMLICRDRIRRLRRSQSEHGTERGAIHDSVNDTITDMLQGKDKAELLSLKKDVTKTIASAETSAG----------VDVEFWEEVSQQIEVYVARARLTELHEDMLGKLHDLIEKYDAAAAAGEHHQQRDSGRVGD------------------------RDESREAMQMERAEAHKELEDMEEKMGMSEEVAIDDVPQ-WSEKYQPRKPRYFNRVKTGYDWNKYNQTHYDHDNPPPKVVQGYKFNLFYPDLIDKHAAPRFFLEKTNSPDFCIIRFSAGPPYQDIAFKIVNREWEYSHKRGFKSVFERGILHLYFNFKRHRYRR 541          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig179.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YNE1_9STRA1.080e-16957.83Cactus-binding C-terminus of cactin protein-domain... [more]
D7FKP9_ECTSI2.110e-15349.90Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2BDL4_9STRA4.790e-14947.98Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A6S9JR17_HETAK1.630e-13048.34Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A8K1CFB0_PYTOL5.030e-12543.93Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
W2QKY9_PHYPN8.640e-12343.27Uncharacterized protein n=7 Tax=Phytophthora TaxID... [more]
A0A6A4CAN4_9STRA1.130e-12142.58Uncharacterized protein n=6 Tax=Phytophthora TaxID... [more]
A0A7S2KTJ2_9STRA6.920e-12045.34Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A6G0WF12_9STRA2.430e-11642.55KIX domain-containing protein n=1 Tax=Aphanomyces ... [more]
K3X2U2_GLOUD1.500e-11541.25Uncharacterized protein n=1 Tax=Globisporangium ul... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig179contigP-wetherbeei_contig179:1..2295 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7FKP9
Preferred nameCACTIN
PFAMsCactinC_cactus,Cactin_mid
Model size1536
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000375,GO:0000377,GO:0000398,GO:0000578,GO:0001654,GO:0001817,GO:0001818,GO:0001932,GO:0001933,GO:0001959,GO:0001960,GO:0002237,GO:0002682,GO:0002683,GO:0002831,GO:0002832,GO:0003002,GO:0003006,GO:0003407,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005737,GO:0005829,GO:0006139,GO:0006355,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0007275,GO:0007346,GO:0007350,GO:0007351,GO:0007389,GO:0007423,GO:0007548,GO:0008150,GO:0008152,GO:0008380,GO:0008406,GO:0008595,GO:0009605,GO:0009607,GO:0009617,GO:0009790,GO:0009791,GO:0009793,GO:0009798,GO:0009880,GO:0009889,GO:0009892,GO:0009948,GO:0009950,GO:0009952,GO:0009953,GO:0009966,GO:0009968,GO:0009987,GO:0010033,GO:0010154,GO:0010389,GO:0010467,GO:0010468,GO:0010556,GO:0010563,GO:0010564,GO:0010605,GO:0010646,GO:0010648,GO:0010971,GO:0016043,GO:0016070,GO:0016071,GO:0016604,GO:0016607,GO:0019219,GO:0019220,GO:0019222,GO:0022414,GO:0022607,GO:0023051,GO:0023057,GO:0030111,GO:0030334,GO:0030335,GO:0031323,GO:0031324,GO:0031326,GO:0031347,GO:0031348,GO:0031399,GO:0031400,GO:0031664,GO:0031665,GO:0031974,GO:0031981,GO:0032088,GO:0032101,GO:0032102,GO:0032268,GO:0032269,GO:0032479,GO:0032480,GO:0032496,GO:0032501,GO:0032502,GO:0032648,GO:0032677,GO:0032680,GO:0032688,GO:0032717,GO:0032720,GO:0032879,GO:0032991,GO:0033993,GO:0034097,GO:0034121,GO:0034122,GO:0034612,GO:0034641,GO:0035282,GO:0040012,GO:0040017,GO:0040019,GO:0042221,GO:0042325,GO:0042326,GO:0043010,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043433,GO:0043900,GO:0043901,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0045088,GO:0045137,GO:0045595,GO:0045787,GO:0045824,GO:0045931,GO:0045936,GO:0045995,GO:0046483,GO:0048316,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0048608,GO:0048731,GO:0048856,GO:0050776,GO:0050777,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051090,GO:0051094,GO:0051171,GO:0051172,GO:0051174,GO:0051239,GO:0051240,GO:0051241,GO:0051246,GO:0051248,GO:0051252,GO:0051259,GO:0051260,GO:0051270,GO:0051272,GO:0051704,GO:0051707,GO:0051716,GO:0051726,GO:0060041,GO:0060255,GO:0060338,GO:0060339,GO:0060759,GO:0060761,GO:0061458,GO:0065003,GO:0065007,GO:0065009,GO:0070013,GO:0070555,GO:0070887,GO:0071013,GO:0071216,GO:0071219,GO:0071222,GO:0071310,GO:0071345,GO:0071347,GO:0071356,GO:0071396,GO:0071704,GO:0071840,GO:0080090,GO:0080134,GO:0090068,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901700,GO:1901701,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902494,GO:1902749,GO:1902751,GO:1903506,GO:1903555,GO:1903556,GO:1990904,GO:2000026,GO:2000112,GO:2000145,GO:2000147,GO:2001141
Exons4
Evalue3.47e-154
EggNOG OGsKOG2370@1|root,KOG2370@2759|Eukaryota
Descriptionnegative regulation of type I interferon-mediated signaling pathway
Cds size1536
COG categoryA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186130.3006337-CDS-P-wetherbeei_contig179:0..2791683186130.3006337-CDS-P-wetherbeei_contig179:0..279Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig179 1..279 +
1683186130.3106406-CDS-P-wetherbeei_contig179:563..6651683186130.3106406-CDS-P-wetherbeei_contig179:563..665Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig179 564..665 +
1683186130.3191648-CDS-P-wetherbeei_contig179:1092..16331683186130.3191648-CDS-P-wetherbeei_contig179:1092..1633Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig179 1093..1633 +
1683186130.3300273-CDS-P-wetherbeei_contig179:1681..22951683186130.3300273-CDS-P-wetherbeei_contig179:1681..2295Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig179 1682..2295 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig179.1.2prot_P-wetherbeei_contig179.1.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig179 1..2295 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig179.1.2

>prot_P-wetherbeei_contig179.1.2 ID=prot_P-wetherbeei_contig179.1.2|Name=mRNA_P-wetherbeei_contig179.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=512bp
TNESNPFLDANLDEQFVWRKKVEKTGAVAPDKREQRLNHVKKVEEIVKVR
KRREDTEKEKEEMERLRAEEARLREQQQYGDWQKKEEEFHLAQAKMRSKI
RLVEGREKAIDMMAKNVLLFGETSAEEVGVKYRSKSQLDTSALEMELREP
YRLFEGLSLVELIELQRDIAEYVELEGDDGPNAAFWRCLAVVCAEELRVA
KAREGIEEEALRGVHPSLLSKVHDTLAPLSLDRLGQMAREITSQLEAGAG
AAGSEEDGGGGGGLDSDYYGLVLRFIGAYEAKAELRAIHQRMLQRQLDRL
EDVRREAPAGGAASGAGAGAYDEEGGEEGGGGGGVGAAAAVGGRAAGRDE
SEAAAELYRREAKRGMEDLEDAFGLKDEVDTSGVVYGWGDRYRPRKPRYF
NRVKTGYDWNKYNQAHYDHDNPPPKAVQGYKFNIFYPDLVDKSKAPRFVL
EPADTNDFVIIRFTAGPPYEDVAFKIVNREWETSRKRGFRVVFDRGVMSV
IFNFKRARYRR*
back to top

mRNA from alignment at P-wetherbeei_contig179:1..2295+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig179.1.2 ID=mRNA_P-wetherbeei_contig179.1.2|Name=mRNA_P-wetherbeei_contig179.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2295bp|location=Sequence derived from alignment at P-wetherbeei_contig179:1..2295+ (Phaeothamnion wetherbeei SAG_119_79)
ACCAACGAGAGCAATCCGTTCCTGGACGCCAACCTCGACGAGCAGTTCGT CTGGCGCAAAAAGGTGGAGAAAACGGGAGCGGTCGCGCCCGATAAGCGGG AGCAGCGCCTCAACCACGTAAAGAAGGTCGAGGAGATCGTCAAGGTGCGC AAGCGCCGTGAGGACACGGAGAAAGAGAAGGAGGAGATGGAAAGGCTCCG TGCCGAGGAAGCTCGACTGCGGGAGCAGCAGCAGTACGGCGACTGGCAGA AGAAGGAGGAGGAGTTCCATCTGGCGCAGGTATTTTGCTTTTTGTGGCGC TTGTTCTCGTGAACGATATGCATTTGTTGTGGCAGTGCCAGTTTTCGATG AGGGCGACCGCGTGGGAGGCTTTAAAATTTGCCGAAATGCCGCCTTACTA AGAACTTTGCCTTGAAAACCAGATTCGAACGCTGGCTGGTCAGAGTCCAT CCTTCGTAGCCGACACCCGACCTTTTTCAACTCTCCTCTTCCGCCTGCTG CCAGCCCTTCCGACGCTTCCCTCTTGTCCCTTTCCATCCCATTCGTCGTG AGCGCTATTCCAGGCGAAGATGCGGAGCAAAATTCGGTTGGTGGAGGGGC GTGAGAAGGCCATTGACATGATGGCGAAGAACGTGCTCCTCTTCGGGGAG ACCAGCGCCGAAGAGGTGCGTCCCGCCCGTCCGTCCGTGCAGTCTGTATG TTGCCGTTCTTCGTTCTCTGCGCTAGCCTGCATTGCTTTCTGGGCCTTCG GTTTTCTTTTGCGGCCAGGGCGATGGCTAGCGCGTTCGGTGTGGCAGTTT GGGTGCTTGTTTGATTAATCTCTGCCTCGGCTCGGTGGAAGGACAGTGGC GTCATAGCTTAATTCCGGCATCCTCTTGGGCGACGCAACTGAAGCAACCG CCGTCGATCATGGAGTTCCGGATGCTGTCATGTCCCTGTTTTCACTAGGC CTACCTGCCCGTATCACAAGCAACAGTTCTTGAAATGCTGCGGAATCTGC TCTCCTTTTCCTCTCTCTCCTTACAACCCTCTCAACCACGCCAACCTCAC CCATACACTTCCCCCTCCCTCCGCTGCCGGCACCCGAATCAGGTGGGCGT CAAGTACCGCTCCAAGAGCCAGCTAGACACGTCCGCCCTCGAGATGGAGC TGCGCGAGCCCTACCGCCTCTTCGAGGGCCTCTCCCTCGTCGAGCTCATC GAGCTGCAGCGCGACATCGCCGAGTACGTCGAGCTCGAGGGCGACGATGG CCCCAACGCCGCCTTCTGGCGCTGCCTCGCCGTCGTCTGCGCCGAGGAGC TGCGCGTCGCCAAGGCCCGCGAGGGCATCGAGGAGGAGGCGCTACGCGGC GTTCACCCGTCGCTGCTCTCCAAGGTGCACGACACGCTCGCACCGCTCTC GCTCGACCGCCTCGGCCAGATGGCCCGAGAGATCACGTCTCAGCTCGAAG CGGGCGCCGGCGCTGCCGGCAGCGAAGAAGACGGCGGCGGCGGCGGGGGC CTGGATTCGGACTACTACGGCTTGGTGCTGCGGTTCATCGGGGCCTACGA GGCCAAGGCGGAGCTGCGCGCCATCCACCAGCGCATGCTGCAGCGGCAGC TGGACCGCCTGGAGGATGTGCGCCGCGAGGCGCGTCGCATGCGGGAGGCC GTCTTGGAGGACGGCGGCGGCGCGGCGGCAGCTGCTGGCGGGGCGGCGTC GGGTGCCGGAGCTGGGGCGTATGACGAAGAGGGAGGAGAAGAAGGCGGCG GCGGCGGCGGCGTCGGCGCGGCAGCAGCTGTCGGTGGCAGGGCAGCCGGC AGGGACGAGTCGGAGGCGGCGGCGGAGCTGTACCGGCGCGAGGCAAAGCG TGGAATGGAGGACCTGGAGGACGCGTTCGGCCTCAAGGACGAGGTGGACA CGAGCGGCGTCGTCTACGGCTGGGGCGACCGCTACCGGCCCCGCAAGCCG CGTTACTTCAACCGCGTCAAGACTGGTTACGACTGGAACAAGTATAACCA GGCGCACTATGACCACGATAACCCGCCGCCGAAGGCCGTTCAGGGCTACA AGTTCAACATCTTCTACCCGGACCTCGTGGACAAGTCCAAGGCGCCGCGC TTCGTGCTGGAGCCGGCCGACACGAACGACTTTGTCATCATCCGCTTCAC GGCGGGGCCACCGTACGAGGATGTCGCCTTCAAGATTGTCAACCGCGAGT GGGAGACAAGCCGGAAGCGCGGCTTCCGCGTCGTGTTCGACCGCGGCGTC ATGAGCGTCATCTTCAACTTCAAGCGGGCGCGTTACCGCCGCTGA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig179:1..2295+

>mRNA_P-wetherbeei_contig179.1.2 ID=mRNA_P-wetherbeei_contig179.1.2|Name=mRNA_P-wetherbeei_contig179.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1536bp|location=Sequence derived from alignment at P-wetherbeei_contig179:1..2295+ (Phaeothamnion wetherbeei SAG_119_79)
ACCAACGAGAGCAATCCGTTCCTGGACGCCAACCTCGACGAGCAGTTCGT
CTGGCGCAAAAAGGTGGAGAAAACGGGAGCGGTCGCGCCCGATAAGCGGG
AGCAGCGCCTCAACCACGTAAAGAAGGTCGAGGAGATCGTCAAGGTGCGC
AAGCGCCGTGAGGACACGGAGAAAGAGAAGGAGGAGATGGAAAGGCTCCG
TGCCGAGGAAGCTCGACTGCGGGAGCAGCAGCAGTACGGCGACTGGCAGA
AGAAGGAGGAGGAGTTCCATCTGGCGCAGGCGAAGATGCGGAGCAAAATT
CGGTTGGTGGAGGGGCGTGAGAAGGCCATTGACATGATGGCGAAGAACGT
GCTCCTCTTCGGGGAGACCAGCGCCGAAGAGGTGGGCGTCAAGTACCGCT
CCAAGAGCCAGCTAGACACGTCCGCCCTCGAGATGGAGCTGCGCGAGCCC
TACCGCCTCTTCGAGGGCCTCTCCCTCGTCGAGCTCATCGAGCTGCAGCG
CGACATCGCCGAGTACGTCGAGCTCGAGGGCGACGATGGCCCCAACGCCG
CCTTCTGGCGCTGCCTCGCCGTCGTCTGCGCCGAGGAGCTGCGCGTCGCC
AAGGCCCGCGAGGGCATCGAGGAGGAGGCGCTACGCGGCGTTCACCCGTC
GCTGCTCTCCAAGGTGCACGACACGCTCGCACCGCTCTCGCTCGACCGCC
TCGGCCAGATGGCCCGAGAGATCACGTCTCAGCTCGAAGCGGGCGCCGGC
GCTGCCGGCAGCGAAGAAGACGGCGGCGGCGGCGGGGGCCTGGATTCGGA
CTACTACGGCTTGGTGCTGCGGTTCATCGGGGCCTACGAGGCCAAGGCGG
AGCTGCGCGCCATCCACCAGCGCATGCTGCAGCGGCAGCTGGACCGCCTG
GAGGATGTGCGCCGCGAGGCGCCTGCTGGCGGGGCGGCGTCGGGTGCCGG
AGCTGGGGCGTATGACGAAGAGGGAGGAGAAGAAGGCGGCGGCGGCGGCG
GCGTCGGCGCGGCAGCAGCTGTCGGTGGCAGGGCAGCCGGCAGGGACGAG
TCGGAGGCGGCGGCGGAGCTGTACCGGCGCGAGGCAAAGCGTGGAATGGA
GGACCTGGAGGACGCGTTCGGCCTCAAGGACGAGGTGGACACGAGCGGCG
TCGTCTACGGCTGGGGCGACCGCTACCGGCCCCGCAAGCCGCGTTACTTC
AACCGCGTCAAGACTGGTTACGACTGGAACAAGTATAACCAGGCGCACTA
TGACCACGATAACCCGCCGCCGAAGGCCGTTCAGGGCTACAAGTTCAACA
TCTTCTACCCGGACCTCGTGGACAAGTCCAAGGCGCCGCGCTTCGTGCTG
GAGCCGGCCGACACGAACGACTTTGTCATCATCCGCTTCACGGCGGGGCC
ACCGTACGAGGATGTCGCCTTCAAGATTGTCAACCGCGAGTGGGAGACAA
GCCGGAAGCGCGGCTTCCGCGTCGTGTTCGACCGCGGCGTCATGAGCGTC
ATCTTCAACTTCAAGCGGGCGCGTTACCGCCGCTGA
back to top