mRNA_P-wetherbeei_contig17897.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig17897.2.1
Unique NamemRNA_P-wetherbeei_contig17897.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig17897.2.1 vs. uniprot
Match: A0A820VEK5_9BILA (Hypothetical protein n=1 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A820VEK5_9BILA)

HSP 1 Score: 122 bits (306), Expect = 4.440e-26
Identity = 113/444 (25.45%), Postives = 187/444 (42.12%), Query Frame = 1
Query:   31 ERTMATTSE----AKKSGGRAGDQAWDAFEILASMQKGGRKKVKCLGCSIVFDNCRSTKARQHV-HACSGIP-----EKAEIIRNIAASVPGSDVSAVRRRSGSAKKRKAEGGASSGVKSKSLITNHFINGVVVSKQMADEINFYILRAIVTGGVPFRFLDNVYFMKIFDVLTGGTWCPVGKRKFQEFGTFLPVVVFKFFPTTIVTTAPPSFFVRPLRAGASTMRGDYLFKEMARVQVLDRGALERAIAVTIVSNGWTDRQGRSIIAVLAVTEQREVHVLSITDYSDSSHTGEFMAGIFTKAVRHIGPR-----KVAAICTDGASNMRKGRDLFVQQEEHKHILDVRCQLHGFNLLFGSVFAAPNPEKPELGVWEPQGKDVMHMGQHIITFFNASHIPCEKLRQAATSFGYSTTALATSNKTRFTSNFTALDSVIKLEAPLQLV 1317
            E T+A+TS     + K GGR  D  W  F  +   +  G +K +C  C   F+  +      H+ H C  I       + E+I  +      S    VRR+S       +E G+++ + SK    + F + ++ S      I+ Y+LRA++  G+ FR ++N +F++    L      P  K+   E                                         L +E+  V+  +   L  A  +T+  +GW+DR  RS+     +T+ R+  VLS+ D S  SHT  F+       +  +        K+ AI TD  + M+K R++F+ +  ++HIL+VRC  H  NL+ G V            V     ++++H    I +F N SH    KL++ A         L T   TR++S    L+S I L APL+++
Sbjct:   20 EVTIASTSSITFVSPKLGGRQRDFIWSFFNDMGPAKTPGHRKAQCKYCLSFFNFAKLHIMYSHIAHQCDEIVIYNPNARKEVIIRMRDFEQQSSPGRVRRQS-------SEAGSANQLMSKQYTMDRFTSRII-SYSEQQNIDRYLLRAVIMNGISFRTVNNDFFIEFVKQLNPSYDLPNRKKLAHE----------------------------------------VLTQEVVYVENKNEALLAEAAHLTLNIDGWSDRCHRSLYEYNVITDSRKAIVLSLIDVSSFSHTAVFLVNRLESVLARVSTNINITSKIRAIVTDNPTTMQKMREMFISKPGNQHILEVRCFAHAINLIAGDV------------VKHVYAQNILHKVTIITSFCNRSHAFKAKLKEEAERLKIKKQTLHTIVTTRWSSVAECLNSFILLRAPLEVL 403          
BLAST of mRNA_P-wetherbeei_contig17897.2.1 vs. uniprot
Match: A0A819AVL6_9BILA (Hypothetical protein n=5 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A819AVL6_9BILA)

HSP 1 Score: 100 bits (248), Expect = 1.750e-19
Identity = 95/406 (23.40%), Postives = 167/406 (41.13%), Query Frame = 1
Query:   31 ERTMATTSE----AKKSGGRAGDQAWDAFEILASMQKGGRKKVKCLGCSIVFDNCRSTKARQHV-HACSGIP-----EKAEIIRNIAASVPGSDVSAVRRRSGSAKKRKAEGGASSGVKSKSLITNHFINGVVVSKQMADEINFYILRAIVTGGVPFRFLDNVYFMKIFDVLTGGTWCPVGKRKFQEFGTFLPVVVFKFFPTTIVTTAPPSFFVRPLRAGASTMRGDYLFKEMARVQVLDRGALERAIAVTIVSNGWTDRQGRSIIAVLAVTEQREVHVLSITDYSDSSHTGEFMAGIFTKAVRHIGPR-----KVAAICTDGASNMRKGRDLFVQQEEHKHILDVRCQLHGFNLLFGSVFAAPNPEKPELGVWEPQGKDVMHMGQHIITFFNASHIPCEKLRQAA 1203
            E T+A+TS     + K GG   D  W  F  +   +  G  K +C      F+  +      H+ H C  I       + E+I  +      S    VRR+S       ++ G+++ + SK   T+ F + ++ S      I+ Y+LRA++  G+ FR ++N +F++    L      P  K+   E                                         L +E+  V+  +   L  A  +T+  +GW+DR  RS+     +T+ R+  +LS+ D S  +H  +F+       +  I        K+ AI TD  + M+K R++F+ +  ++HIL++RC  H  NL+ G +            V     ++++H    I +F N SH    KL++ A
Sbjct:   20 EVTIASTSSITFVSLKLGGHQRDFIWSFFNDMGPAKTPGHHKAQCKYYLSFFNFAKLHIMYSHIAHQCDEIVIYNPNARKEVITRMRDFEQQSPPGRVRRQS-------SKTGSANQLMSKQYTTDRFTSRII-SYSEQQNIDRYLLRAVIMNGILFRTINNDFFIEFIKQLNPSYDLPNRKKLAHEL----------------------------------------LTQEVVYVENKNESLLAEAAHLTLNIDGWSDRCHRSLYEYNVITDSRKAIILSLIDVSSFNHIADFLINRLESILAGISTNINIKSKIRAIVTDNPNTMQKMREMFISKPGNQHILELRCFAHAINLIAGDI------------VKHVYAQNILHKVTIITSFCNRSHAFKAKLKEEA 365          
BLAST of mRNA_P-wetherbeei_contig17897.2.1 vs. uniprot
Match: UPI001C145DFA (Hypothetical protein n=6 Tax=Rhizophagus irregularis TaxID=588596 RepID=UPI001C145DFA)

HSP 1 Score: 94.7 bits (234), Expect = 5.440e-17
Identity = 83/326 (25.46%), Postives = 138/326 (42.33%), Query Frame = 1
Query:  415 ADEINFYILRAIVTGGVPFRFLDNVYFMKIFDVLTGGTWCPVGKRKFQEFGTFLPVVVFKFFPTTIVTTAPPSFFVRPLRAGASTMRGDYLFKEMARVQVLDRGALERAIAVTIVSNGWTDRQGRSIIAVLAVTEQREVHVLSITDYSDSSHTGEFMAGIFTKAVRHIGPRKVAAICTDGASNMRKGRDLFVQQEEHKHILDVRCQLHGFNLLFGSVFAAPNPEKPELGVWEPQGKDVMHMGQHIITFFNASH----IPCEKLRQAATSFGYSTTALATSNKTRFTSNFTALDSVIKLEAPLQLVYTNNPQFFSKKPLIAAVLQDR 1380
            A  I+  I  A +  G+PFR ++N +F+    +L                                        ++ P R    T+ G  L  E+A+V       LE    +TI  +GWT   G SI   + +T  RE ++  + +YS+ SHT EF+A      +  IG +K+ AI +D  +N+   R L   +  +K IL++RC  H +NL+   +      E+            ++     II FF  SH    I  EK++Q   S G     L T  +TR+T+    + S+++L+  L+ +  N+ +  +  P I  +L  R
Sbjct:  131 ASLIDEAISLAFIMCGIPFRVINNPFFINALKILNPN-------------------------------------YIAPSR---KTLSGRLLDNEVAKVNNKIDEVLEFTNNLTIGLDGWTAPDGSSIWNFIVLTSTREEYLYELGNYSNQSHTAEFLANQIESVINRIGSKKIIAIVSDNGANVASARRLICSK--YKKILNIRCIAHCYNLISKDIILHTFAER------------MIQRANRIIQFFKKSHKAAAILKEKIKQHEISGG----GLKTYVETRWTTVHECVSSIVRLKNCLEDIRDNHSEVITT-PAILTILHSR 397          
BLAST of mRNA_P-wetherbeei_contig17897.2.1 vs. uniprot
Match: A0A8H3LNV7_9GLOM (Ribonuclease H-like domain-containing protein n=2 Tax=Rhizophagus clarus TaxID=94130 RepID=A0A8H3LNV7_9GLOM)

HSP 1 Score: 84.3 bits (207), Expect = 8.840e-14
Identity = 54/190 (28.42%), Postives = 100/190 (52.63%), Query Frame = 1
Query:  748 VTIVSNGWTDRQGRSIIAVLAVTEQREVHVLSITDYSDSSHTGEFMAGIFTKAVRHIGPRKVAAICTDGASNMRKGRDLFVQQEEHKHILDVRCQLHGFNLLFGSVFAAPNPEKPELGVWEPQGKDVMHMGQHIITFFNASHIPCEKLRQAATSFGYSTTALATSNKTRFTSNFTALDSVIKLEAPLQLV 1317
            +T+V + W+  + RS+   + +T QR+ ++  ++D++D SHTGEF+A      +  + P K +AIC+D ASN++  R + V++  + +I+D+RC  H FNL+   +       K            ++     II FF  SH+   KL +           L T  KT +T+ + ++ SV++L++ L+ +
Sbjct:  166 LTLVLDRWSSAKNRSLWNFIILTPQRKEYLYYLSDFTDYSHTGEFLARKIDNILNKVDPEKFSAICSDNASNVKLARSIIVKK--YPNIIDMRCISHCFNLISCDIMEHSFAFK------------LIAKVNIIIKFFKNSHVAA-KLTEMIKERNIEGGGLKTYCKTHWTTVYNSIASVLRLKSILEYI 340          
BLAST of mRNA_P-wetherbeei_contig17897.2.1 vs. uniprot
Match: UPI001246E570 (uncharacterized protein LOC115960870 n=1 Tax=Quercus lobata TaxID=97700 RepID=UPI001246E570)

HSP 1 Score: 72.8 bits (177), Expect = 2.150e-10
Identity = 62/228 (27.19%), Postives = 101/228 (44.30%), Query Frame = 1
Query:  421 EINFYILRAIVTGGVPFRFLDNVYFMKIFDVLTGGTWCPVGKRKFQEFGTFLPVVVFKFFPTTIVTTAPPSFFVRPLRAGASTMRGDYLFKEMARVQVLDRGALERAI--AVTIVSNGWTDRQGRSIIAVLAVTEQREVHVLSITDYSDSSHTGEFMAGIFTKAVRHIGPRKVAAICTDGASNMRKGRDLFVQQEEHKHILDVRCQLHGFNLLFGSVFAAPNPEKPEL 1098
            +++  I R   TGG+PF F  N ++                 R    F                 T + P +    L  G + +R   L KE A V+ L +   +  +   V+IVS+GW+D Q RS+I ++AV++   V + +I D S       ++AG+   A++ IG  KV  + TD A+ M+    L   + E+  I    C +H  NL+  ++ A  N EK E+
Sbjct:  108 DLDSRIARMFYTGGLPFNFARNPHY-----------------RSSYAFAA---------------THSIPGY----LPPGYNALRTTLLQKERAHVERLLKPIKDSWLENGVSIVSDGWSDPQRRSLINIMAVSDGGPVFIKAI-DGSGEFKDKHYIAGVLKDAIKEIGHEKVVQVITDNANVMKAAGALI--EGEYPKIFWTPCVVHTLNLVLKNICATKNTEKNEV 296          
BLAST of mRNA_P-wetherbeei_contig17897.2.1 vs. uniprot
Match: UPI001B88C15C (uncharacterized protein LOC121369937 n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88C15C)

HSP 1 Score: 73.2 bits (178), Expect = 3.980e-10
Identity = 63/222 (28.38%), Postives = 93/222 (41.89%), Query Frame = 1
Query:  403 SKQMADEINFYILRAIVTGGVPFRFLDNVYFMKIFDVLTGGTWCPVGKRKFQEFGTFLPVVVFKFFPTTIVTTAPPSFFVRPLRAGASTMRGDYLFK-EMARVQVLDRGALERAIAVTIVSNGWTDRQGRSIIAVLAVTEQREVHVLSITDYSDSSHTGEFMAGIFTKAVRHIGPRKVAAICTDGASNMRKGRDLFVQQEEHKHILDVRCQLHGFNLLFGSV 1065
            ++Q ADE    + RAI   G P     NVY+ + F+                                    T  P++   P R   ST     LF+ E  RV       ++ A  + ++S+GW++ +G SII  +  T Q  V   S+ D  D  HT E++A      +  IG  KV A+ TD A+NM+    +    EE+ HI  + C  HG +LL G V
Sbjct:   87 TRQKADES---LARAIYASGSPLMLTSNVYWKRFFN------------------------------------TIRPAYSP-PTRYALSTN----LFEAEYVRVHDKVTETIQNADCLAVISDGWSNIRGESIINYIITTPQ-PVFFKSV-DTKDKRHTSEYIANEVKNVITDIGCNKVFAVITDNAANMKDAWKII--NEEYPHITPIGCAAHGLSLLLGDV 260          
BLAST of mRNA_P-wetherbeei_contig17897.2.1 vs. uniprot
Match: M1WEP4_CLAP2 (DUF659 domain-containing protein n=1 Tax=Claviceps purpurea (strain 20.1) TaxID=1111077 RepID=M1WEP4_CLAP2)

HSP 1 Score: 70.1 bits (170), Expect = 4.980e-10
Identity = 53/192 (27.60%), Postives = 87/192 (45.31%), Query Frame = 1
Query:  748 VTIVSNGWTDRQGRSIIAVLAVTEQREVHVLSITDYSDSSHTGEFMAGIFTKAVRHIGPRKVAAICTDGASNMRKGRDLFVQQEEHKHILDVRCQLHGFNLLFGSVFA-APNPEKPELGVWEPQGKDVMHMGQHIITFFNASHIPCEKLRQAATSFGYSTTAL--ATSNKTRFTSNFTALDSVIKLEAPLQL 1314
            +T+V++GW + +G SII  + VT +   H  S      +SHTGEF+A      +  +G R + AIC D A+N +K  ++ + QE+   + D+ C  H  NL+   +   +P  E  +  V              +  +F   HI  + L +     G  T  L   ++N T+F   F A     +L+   QL
Sbjct:   18 LTLVTDGWINVRGESIINYMLVTPEGGAHFHSSETAGVNSHTGEFLAQRMMNVIEKVGVRHINAICCDSAANQQK--EVQLVQEKLTRVFDIECISHQLNLVIKDILKLSPFAETMQCAV-------------SLAKWFRNHHIVLKHLNEQPGKIGLETNELHKRSNNITKF---FDAFPEAFRLDQGQQL 191          
BLAST of mRNA_P-wetherbeei_contig17897.2.1 vs. uniprot
Match: UPI001E1CE135 (uncharacterized protein LOC123505818 n=2 Tax=Portunus trituberculatus TaxID=210409 RepID=UPI001E1CE135)

HSP 1 Score: 72.8 bits (177), Expect = 5.440e-10
Identity = 60/223 (26.91%), Postives = 92/223 (41.26%), Query Frame = 1
Query:  397 VVSKQMADEINFYILRAIVTGGVPFRFLDNVYFMKIFDVLTGGTWCPVGKRKFQEFGTFLPVVVFKFFPTTIVTTAPPSFFVRPLRAGASTMRGDYLFKEMARVQVLDRGALERAIAVTIVSNGWTDRQGRSIIAVLAVTEQREVHVLSITDYSDSSHTGEFMAGIFTKAVRHIGPRKVAAICTDGASNMRKGRDLFVQQEEHKHILDVRCQLHGFNLLFGSV 1065
            ++S     +++  + RAI   G P    +NVY+ K F             R+ +                       PS+ + P+R   S+     L  E  RVQ      +  A  +++VS+GW++ +G SII  +  T Q     L  TD  D  HT E++A      +  +G +KV A+ TD A+NM+    L    E   HI  + C  H  NLL   V
Sbjct:  104 IMSSNEKQKLDESLARAIYASGSPLMLTENVYWRKFF-------------REMR-----------------------PSYKL-PVRHALSS---HLLDSEYKRVQDRVTAVIRDADCLSVVSDGWSNVRGESIINYIISTPQPVF--LRSTDTKDKQHTKEYIASEMISVIEQVGSQKVFAVVTDNAANMKAAWKLV--SENFPHITGIGCAAHTLNLLLSDV 282          
BLAST of mRNA_P-wetherbeei_contig17897.2.1 vs. uniprot
Match: UPI001035629D (uncharacterized protein LOC114311994 n=2 Tax=Camellia sinensis TaxID=4442 RepID=UPI001035629D)

HSP 1 Score: 71.6 bits (174), Expect = 6.430e-10
Identity = 60/232 (25.86%), Postives = 100/232 (43.10%), Query Frame = 1
Query:  418 DEINFYILRAIVTGG--VPFRFLDNVYFMKIFDVLTGGTWCPVGKRKFQEFGTFLPVVVFKFFPTTIVTTAPPSFFVRPLRAGASTMRGDYLFKEMARVQVL---DRGALERAIAVTIVSNGWTDRQGRSIIAVLAVTEQREVHVLSITDYSDSSHTGEFMAGIFTKAVRHIGPRKVAAICTDGASNMRKGRDLFVQQEEHKHILDVRCQLHGFNLLFGSVFAAPNPEKPEL 1098
            ++++F I+R   +GG  VPF  + N Y++  +                                T +     P +    L  G + +R   L KE A +  L    RG  E   A +IVS+GW+D QGR +I  +AV+E   + + +  D S  +   +F+A +  + +  +G   V  + TD A N +    L   + +  HIL   C +H  NL   ++ AA N E+ E+
Sbjct:  146 EQLHFEIVRMFYSGGGGVPFNLVRNPYYVSSY--------------------------------TFVANHNIPGY----LPPGYNLLRTTLLQKERANIDKLLQPIRGTWEEKWA-SIVSDGWSDSQGRPLINFMAVSESGPMFIKA-ADCSGETKDKDFIANLMKEMINEVGASNVVQVITDNAPNCKAAGQLI--EAQFPHILWTPCVMHTLNLPLKNICAAKNIERNEV 337          
BLAST of mRNA_P-wetherbeei_contig17897.2.1 vs. uniprot
Match: UPI002026CD0C (uncharacterized protein LOC125426986 n=1 Tax=Sphaerodactylus townsendi TaxID=933632 RepID=UPI002026CD0C)

HSP 1 Score: 70.5 bits (171), Expect = 3.180e-9
Identity = 39/129 (30.23%), Postives = 72/129 (55.81%), Query Frame = 1
Query:  685 LFKEMARVQVLDRGALERAIAVTIVSNGWTDRQGRSIIAVLAVTEQREVHVLSITDYSDSSHTGEFMAGIFTKAVRHIGPRKVAAICTDGASNMRKGRDLFVQQEEHKHILDVRCQLHGFNLLFGSVFA 1071
            L +E  RVQ +    L +A ++T++S+GW D QG+S++ ++  T  + V + +I   S S H   ++A + +  ++  GP KV A+ TDG +NM+    +   + ++ H++   C  HG NLL   + +
Sbjct:  194 LDREYGRVQTMVVQRLGQAESLTLMSDGWADMQGKSLLNIMFATP-KPVFLKAIASKS-SRHMSNYIAKVLSGEIQSAGPSKVLALVTDGGANMKGAWQIL--KAKYPHLIVFGCVAHGLNLLAEDILS 318          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17897.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A820VEK5_9BILA4.440e-2625.45Hypothetical protein n=1 Tax=Rotaria sp. Silwood2 ... [more]
A0A819AVL6_9BILA1.750e-1923.40Hypothetical protein n=5 Tax=Rotaria sp. Silwood1 ... [more]
UPI001C145DFA5.440e-1725.46Hypothetical protein n=6 Tax=Rhizophagus irregular... [more]
A0A8H3LNV7_9GLOM8.840e-1428.42Ribonuclease H-like domain-containing protein n=2 ... [more]
UPI001246E5702.150e-1027.19uncharacterized protein LOC115960870 n=1 Tax=Querc... [more]
UPI001B88C15C3.980e-1028.38uncharacterized protein LOC121369937 n=1 Tax=Gigan... [more]
M1WEP4_CLAP24.980e-1027.60DUF659 domain-containing protein n=1 Tax=Claviceps... [more]
UPI001E1CE1355.440e-1026.91uncharacterized protein LOC123505818 n=2 Tax=Portu... [more]
UPI001035629D6.430e-1025.86uncharacterized protein LOC114311994 n=2 Tax=Camel... [more]
UPI002026CD0C3.180e-930.23uncharacterized protein LOC125426986 n=1 Tax=Sphae... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17897contigP-wetherbeei_contig17897:16..1395 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog588596.U9TVW1
PFAMsDUF659
Model size1380
Max annot lvl33154|Opisthokonta
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.45e-16
EggNOG OGs2E1UA@1|root,2S94A@2759|Eukaryota,3A9M8@33154|Opisthokonta
Cds size1341
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186130.2575052-UTR-P-wetherbeei_contig17897:15..541683186130.2575052-UTR-P-wetherbeei_contig17897:15..54Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig17897 16..54 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186130.2736008-CDS-P-wetherbeei_contig17897:54..13951683186130.2736008-CDS-P-wetherbeei_contig17897:54..1395Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17897 55..1395 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17897.2.1prot_P-wetherbeei_contig17897.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig17897 55..1395 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig17897.2.1

>prot_P-wetherbeei_contig17897.2.1 ID=prot_P-wetherbeei_contig17897.2.1|Name=mRNA_P-wetherbeei_contig17897.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=447bp
MATTSEAKKSGGRAGDQAWDAFEILASMQKGGRKKVKCLGCSIVFDNCRS
TKARQHVHACSGIPEKAEIIRNIAASVPGSDVSAVRRRSGSAKKRKAEGG
ASSGVKSKSLITNHFINGVVVSKQMADEINFYILRAIVTGGVPFRFLDNV
YFMKIFDVLTGGTWCPVGKRKFQEFGTFLPVVVFKFFPTTIVTTAPPSFF
VRPLRAGASTMRGDYLFKEMARVQVLDRGALERAIAVTIVSNGWTDRQGR
SIIAVLAVTEQREVHVLSITDYSDSSHTGEFMAGIFTKAVRHIGPRKVAA
ICTDGASNMRKGRDLFVQQEEHKHILDVRCQLHGFNLLFGSVFAAPNPEK
PELGVWEPQGKDVMHMGQHIITFFNASHIPCEKLRQAATSFGYSTTALAT
SNKTRFTSNFTALDSVIKLEAPLQLVYTNNPQFFSKKPLIAAVLQDR
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mRNA from alignment at P-wetherbeei_contig17897:16..1395+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig17897.2.1 ID=mRNA_P-wetherbeei_contig17897.2.1|Name=mRNA_P-wetherbeei_contig17897.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1380bp|location=Sequence derived from alignment at P-wetherbeei_contig17897:16..1395+ (Phaeothamnion wetherbeei SAG_119_79)
TTTTGAACTCCTGCACTTAGACGCGAGGGCGAGAGGACAATGGCTACTAC GAGCGAGGCCAAGAAGTCGGGAGGACGAGCGGGAGACCAGGCATGGGACG CCTTCGAGATATTAGCGAGCATGCAGAAAGGAGGGCGCAAGAAAGTGAAG TGCCTAGGCTGCTCGATTGTCTTTGACAACTGTCGTTCGACGAAGGCGCG ACAGCACGTCCATGCCTGCTCAGGTATTCCTGAGAAAGCCGAGATCATCA GGAATATCGCCGCAAGCGTGCCTGGGTCGGACGTGAGTGCTGTACGAAGA AGGAGTGGCAGCGCAAAAAAGAGGAAAGCGGAGGGAGGGGCGAGTAGTGG TGTTAAGAGCAAGAGTCTGATCACCAACCATTTCATCAACGGCGTCGTGG TGTCGAAGCAGATGGCCGACGAAATCAACTTCTACATCTTGCGCGCCATC GTCACTGGCGGTGTGCCGTTCAGATTTCTGGACAATGTTTACTTCATGAA GATCTTCGATGTGCTGACTGGCGGAACCTGGTGTCCAGTAGGTAAGCGGA AGTTCCAGGAGTTTGGTACATTTCTTCCTGTTGTCGTATTTAAGTTTTTT CCCACCACCATCGTCACCACTGCACCGCCGTCGTTCTTCGTGCGTCCGTT GCGTGCAGGCGCATCCACAATGCGAGGGGACTACCTTTTCAAGGAGATGG CGCGGGTACAGGTGCTGGATCGGGGGGCGCTCGAGAGGGCCATCGCCGTC ACCATCGTGTCGAACGGTTGGACGGACAGGCAAGGACGCTCCATCATTGC CGTCCTTGCGGTCACGGAGCAGCGCGAAGTGCACGTGCTGTCCATCACCG ACTACAGCGATTCCTCCCACACGGGCGAGTTCATGGCGGGGATCTTCACC AAGGCGGTACGGCACATCGGTCCAAGAAAGGTGGCAGCTATTTGCACGGA CGGCGCGTCCAACATGCGAAAGGGCCGCGATCTCTTCGTCCAGCAGGAGG AGCACAAGCACATCCTCGACGTGCGATGCCAGCTTCACGGCTTCAACCTC CTCTTTGGCTCGGTCTTCGCGGCGCCGAACCCGGAGAAGCCGGAGCTGGG AGTTTGGGAGCCGCAGGGGAAGGATGTCATGCACATGGGGCAGCACATTA TCACCTTCTTCAATGCTTCCCACATTCCATGTGAGAAGCTCCGGCAGGCG GCGACGAGTTTCGGCTATTCGACTACAGCGCTCGCCACCTCCAACAAGAC GCGTTTCACGTCCAACTTCACCGCCCTCGACTCTGTCATCAAGCTGGAGG CTCCGCTGCAGCTGGTCTACACCAACAACCCGCAGTTTTTCAGCAAGAAG CCGCTGATTGCAGCAGTGCTGCAAGATCGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig17897:16..1395+

>mRNA_P-wetherbeei_contig17897.2.1 ID=mRNA_P-wetherbeei_contig17897.2.1|Name=mRNA_P-wetherbeei_contig17897.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1341bp|location=Sequence derived from alignment at P-wetherbeei_contig17897:16..1395+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCTACTACGAGCGAGGCCAAGAAGTCGGGAGGACGAGCGGGAGACCA
GGCATGGGACGCCTTCGAGATATTAGCGAGCATGCAGAAAGGAGGGCGCA
AGAAAGTGAAGTGCCTAGGCTGCTCGATTGTCTTTGACAACTGTCGTTCG
ACGAAGGCGCGACAGCACGTCCATGCCTGCTCAGGTATTCCTGAGAAAGC
CGAGATCATCAGGAATATCGCCGCAAGCGTGCCTGGGTCGGACGTGAGTG
CTGTACGAAGAAGGAGTGGCAGCGCAAAAAAGAGGAAAGCGGAGGGAGGG
GCGAGTAGTGGTGTTAAGAGCAAGAGTCTGATCACCAACCATTTCATCAA
CGGCGTCGTGGTGTCGAAGCAGATGGCCGACGAAATCAACTTCTACATCT
TGCGCGCCATCGTCACTGGCGGTGTGCCGTTCAGATTTCTGGACAATGTT
TACTTCATGAAGATCTTCGATGTGCTGACTGGCGGAACCTGGTGTCCAGT
AGGTAAGCGGAAGTTCCAGGAGTTTGGTACATTTCTTCCTGTTGTCGTAT
TTAAGTTTTTTCCCACCACCATCGTCACCACTGCACCGCCGTCGTTCTTC
GTGCGTCCGTTGCGTGCAGGCGCATCCACAATGCGAGGGGACTACCTTTT
CAAGGAGATGGCGCGGGTACAGGTGCTGGATCGGGGGGCGCTCGAGAGGG
CCATCGCCGTCACCATCGTGTCGAACGGTTGGACGGACAGGCAAGGACGC
TCCATCATTGCCGTCCTTGCGGTCACGGAGCAGCGCGAAGTGCACGTGCT
GTCCATCACCGACTACAGCGATTCCTCCCACACGGGCGAGTTCATGGCGG
GGATCTTCACCAAGGCGGTACGGCACATCGGTCCAAGAAAGGTGGCAGCT
ATTTGCACGGACGGCGCGTCCAACATGCGAAAGGGCCGCGATCTCTTCGT
CCAGCAGGAGGAGCACAAGCACATCCTCGACGTGCGATGCCAGCTTCACG
GCTTCAACCTCCTCTTTGGCTCGGTCTTCGCGGCGCCGAACCCGGAGAAG
CCGGAGCTGGGAGTTTGGGAGCCGCAGGGGAAGGATGTCATGCACATGGG
GCAGCACATTATCACCTTCTTCAATGCTTCCCACATTCCATGTGAGAAGC
TCCGGCAGGCGGCGACGAGTTTCGGCTATTCGACTACAGCGCTCGCCACC
TCCAACAAGACGCGTTTCACGTCCAACTTCACCGCCCTCGACTCTGTCAT
CAAGCTGGAGGCTCCGCTGCAGCTGGTCTACACCAACAACCCGCAGTTTT
TCAGCAAGAAGCCGCTGATTGCAGCAGTGCTGCAAGATCGG
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