mRNA_P-wetherbeei_contig17893.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig17893.1.1 vs. uniprot
Match: A0A3C0TXL0_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TXL0_9PROT) HSP 1 Score: 127 bits (318), Expect = 5.330e-35 Identity = 58/121 (47.93%), Postives = 78/121 (64.46%), Query Frame = 1
Query: 1 MVRVFGGKNSRASQRALRWMEERGVSYRFFDLDAARIDARLLDAWFDTFGWQMLIDKRTAGWRNQSSDLKNTLGAAEALALLCHRPNMLKTPIIGVADIWLLGWNAPNKVRLLGQIPPQSR 363
MV++FGG + R+S+RA +W+ ERG+ F DL ID LDAW FGW+ LIDKR+ WR + + LG EA ++ P +LK+P+IGV + WLLGWNA NK+RLLG +P R
Sbjct: 1 MVKIFGGADCRSSRRAFQWLGERGLLCHFVDLKKRGIDEAHLDAWIQDFGWRRLIDKRSVAWRTLTQGHSHQLGPREAREIISRHPALLKSPLIGVRNQWLLGWNAKNKIRLLGLLPEHHR 121
BLAST of mRNA_P-wetherbeei_contig17893.1.1 vs. uniprot
Match: A0A833ISW4_9GAMM (ArsC family reductase n=1 Tax=Alkalilimnicola sp. S0819 TaxID=2613922 RepID=A0A833ISW4_9GAMM) HSP 1 Score: 84.3 bits (207), Expect = 1.360e-18 Identity = 42/120 (35.00%), Postives = 64/120 (53.33%), Query Frame = 1
Query: 1 MVRVFGGKNSRASQRALRWMEERGVSYRFFDLDAARIDARLLDAWFDTFGWQMLIDKRTAGWRNQSSDLKNTLGAAEALALLCHRPNMLKTPIIGVADIWLLGWNAPNKVRLLGQIPPQS 360
M ++G KN ++A RW++ RGV YRF DL A + A W + GW+ ++++R WR LK T AA A ALL P ++K P++ AD +G+N + L G+ P +
Sbjct: 1 MTTLYGIKNCDTVRKARRWLDARGVDYRFHDLRADGLSAEQTARWCEACGWEQVLNRRGTTWRQLDGALKATADAANAPALLAEHPTLIKRPVLEHADRIRVGFNEADYSTLFGEDTPPN 120
BLAST of mRNA_P-wetherbeei_contig17893.1.1 vs. uniprot
Match: A0A2E0LHH4_9GAMM (ArsC family reductase n=1 Tax=Porticoccaceae bacterium TaxID=2026782 RepID=A0A2E0LHH4_9GAMM) HSP 1 Score: 79.0 bits (193), Expect = 1.390e-16 Identity = 40/114 (35.09%), Postives = 62/114 (54.39%), Query Frame = 1
Query: 1 MVRVFGGKNSRASQRALRWMEERGVSYRFFDLDAARIDARLLDAWFDTFGWQMLIDKRTAGWRNQSSDLKNTLGAAEALALLCHRPNMLKTPIIGVADIWLLGWNAPNKVRLLG 342
M + G N +RA RW++ERG+ YRF D+ AA +DA L+ W T GWQ L+++R+ WR + + L AA A LL P +L+ P++ +G++ R+ G
Sbjct: 1 MTDLHGIPNCDTVRRARRWLDERGIDYRFHDVRAAGLDAGRLNHWLATLGWQALVNRRSTTWRQLDTRERECLSAATAAELLRTHPTLLRRPVLEHRGTIEVGFSPECYQRIFG 114
BLAST of mRNA_P-wetherbeei_contig17893.1.1 vs. uniprot
Match: A0A7T2GHT5_9SPHN (ArsC family reductase n=1 Tax=Sphingosinicella flava TaxID=2771430 RepID=A0A7T2GHT5_9SPHN) HSP 1 Score: 77.8 bits (190), Expect = 3.950e-16 Identity = 34/104 (32.69%), Postives = 59/104 (56.73%), Query Frame = 1
Query: 1 MVRVFGGKNSRASQRALRWMEERGVSYRFFDLDAARIDARLLDAWFDTFGWQMLIDKRTAGWRNQSSDLKNTLGAAEALALLCHRPNMLKTPIIGVADIWLLGW 312
M+ ++G KN ++A W++ +G+ Y F D A +D L AW D FGW+ ++++ +R K L A++L+ +P+M+K PI+G + WLLG+
Sbjct: 1 MLTLYGIKNCDTVKKARAWLDAQGIGYTFHDYKVAGVDEAQLRAWVDEFGWEKVLNRAGTTFRKLPDTDKEGLDVDRAVSLMLAQPSMIKRPILGTGECWLLGF 104
BLAST of mRNA_P-wetherbeei_contig17893.1.1 vs. uniprot
Match: A0A4R1H9B3_9GAMM (Spx/MgsR family transcriptional regulator n=1 Tax=Thiogranum longum TaxID=1537524 RepID=A0A4R1H9B3_9GAMM) HSP 1 Score: 77.4 bits (189), Expect = 5.440e-16 Identity = 33/105 (31.43%), Postives = 58/105 (55.24%), Query Frame = 1
Query: 1 MVRVFGGKNSRASQRALRWMEERGVSYRFFDLDAARIDARLLDAWFDTFGWQMLIDKRTAGWRNQSSDLKNTLGAAEALALLCHRPNMLKTPIIGVADIWLLGWN 315
M+ ++G KN ++A+RW++E GV YRF D +DA+ L AW GW+ L+++R WR ++ + AL + P ++K P++ + +LG+N
Sbjct: 1 MIAIYGIKNCDTMKKAMRWLDEHGVEYRFHDYRKDGLDAKQLKAWEKELGWEQLLNRRGQLWRKLPQSARDNIDRETALKCMLDNPGIIKRPLLDTGEHRVLGFN 105
BLAST of mRNA_P-wetherbeei_contig17893.1.1 vs. uniprot
Match: A0A212UBP8_9GAMM (Arsenate reductase n=1 Tax=Marinobacter sp. es.048 TaxID=1761795 RepID=A0A212UBP8_9GAMM) HSP 1 Score: 76.3 bits (186), Expect = 1.500e-15 Identity = 30/105 (28.57%), Postives = 63/105 (60.00%), Query Frame = 1
Query: 4 VRVFGGKNSRASQRALRWMEERGVSYRFFDLDAARIDARLLDAWFDTFGWQMLIDKRTAGWRNQSSDLKNTLGAAEALALLCHRPNMLKTPIIGVADIWLLGWNA 318
++++G KN ++A +W++ +G+ Y F D +D+ LL W T GW++L+++R WR ++++T+ A A A++ P+++K P++ D +G++A
Sbjct: 1 MKLYGIKNCDTVKKARKWLDGQGIDYEFHDFKKDGLDSELLSRWEQTVGWEILLNRRGTTWRKLPEEVRDTISAQSAHAIMLDNPSIIKRPVVESGDEVRVGFSA 105
BLAST of mRNA_P-wetherbeei_contig17893.1.1 vs. uniprot
Match: A0A6I5IXJ7_9VIBR (ArsC family reductase n=9 Tax=Vibrio TaxID=662 RepID=A0A6I5IXJ7_9VIBR) HSP 1 Score: 76.3 bits (186), Expect = 1.580e-15 Identity = 37/106 (34.91%), Postives = 60/106 (56.60%), Query Frame = 1
Query: 1 MVRVFGGKNSRASQRALRWMEERGVSYRFFDLDAARIDARLLDAWFDTFGWQMLIDKRTAGWRNQSSDLKNTLGAAEALALLCHRPNMLKTPIIGVADIWLLGWNA 318
++ ++G N ++A +W+E + + Y+F D I L+ +F + GW+ +I+KR +R S + K L A ALALL +P M+K PI+ V D LG+NA
Sbjct: 2 LITLYGIPNCDTIKKARKWLETQAIEYQFHDYRKNGITLELISEFFQSLGWEHVINKRGTTYRQLSQEQKEKLNEASALALLLEQPAMIKRPILRVQDTLYLGFNA 107
BLAST of mRNA_P-wetherbeei_contig17893.1.1 vs. uniprot
Match: A0A2N5YFD9_9GAMM (ArsC family reductase n=2 Tax=Halioglobus TaxID=1217416 RepID=A0A2N5YFD9_9GAMM) HSP 1 Score: 75.9 bits (185), Expect = 2.410e-15 Identity = 30/112 (26.79%), Postives = 63/112 (56.25%), Query Frame = 1
Query: 1 MVRVFGGKNSRASQRALRWMEERGVSYRFFDLDAARIDARLLDAWFDTFGWQMLIDKRTAGWRNQSSDLKNTLGAAEALALLCHRPNMLKTPIIGVADIWLLGWNAPNKVRL 336
M+ ++G KN ++A +W++E+G+ YRF D A +DA + W D+ GW+ ++++R+ W+ SS+ + + AL+ + P ++K P++ + G+ A ++
Sbjct: 1 MITLYGIKNCDTVKKARKWLDEKGMDYRFHDFRADGVDADQVANWLDSLGWETVVNRRSTTWKGLSSEQREGMDRDSALSAIVEEPTLVKRPLLDTGGEYHCGFKADQYAQI 112
BLAST of mRNA_P-wetherbeei_contig17893.1.1 vs. uniprot
Match: A0A5D0VQG3_9GAMM (ArsC family reductase n=1 Tax=Marinobacter sp. BW6 TaxID=2592624 RepID=A0A5D0VQG3_9GAMM) HSP 1 Score: 75.5 bits (184), Expect = 3.000e-15 Identity = 31/105 (29.52%), Postives = 62/105 (59.05%), Query Frame = 1
Query: 4 VRVFGGKNSRASQRALRWMEERGVSYRFFDLDAARIDARLLDAWFDTFGWQMLIDKRTAGWRNQSSDLKNTLGAAEALALLCHRPNMLKTPIIGVADIWLLGWNA 318
++++G KN ++A +W++E+G+ Y+F D + LL W + GW+ LI++R WR D+++T+ A A A++ P+++K P++ D +G++A
Sbjct: 1 MKLYGIKNCDTVKKARKWLDEQGIDYQFHDFKKDGLGDELLSRWEKSLGWEALINRRGTTWRKLPEDVRDTISAQSAHAIMLDNPSIIKRPVVESGDDVRVGFSA 105
BLAST of mRNA_P-wetherbeei_contig17893.1.1 vs. uniprot
Match: A0A1Y5PNS6_9SPHN (Uncharacterized protein n=1 Tax=uncultured Sphingopyxis sp. TaxID=310581 RepID=A0A1Y5PNS6_9SPHN) HSP 1 Score: 75.5 bits (184), Expect = 3.240e-15 Identity = 37/108 (34.26%), Postives = 60/108 (55.56%), Query Frame = 1
Query: 1 MVRVFGGKNSRASQRALRWMEERGVSYRFFDLDAARIDARLLDAWFDTFGWQMLIDKRTAGWRNQSSDLKNTLGAAEALALLCHRPNMLKTPIIGVADIWLLGWNAPN 324
++ VFG N ++A RW++ERGV+YRF D+ +DA L W D GW+ L++K +R K L AA A AL+ +P M++ P++ +G++A +
Sbjct: 2 LLTVFGIPNCDTVKKARRWLDERGVAYRFHDVRKDGLDAARLQGWIDAVGWEKLLNKAGTTFRKLPEAQKEGLDAAAAKALMLEQPAMIRRPVVEAGGEISVGFSAAD 109 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17893.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig17893.1.1 >prot_P-wetherbeei_contig17893.1.1 ID=prot_P-wetherbeei_contig17893.1.1|Name=mRNA_P-wetherbeei_contig17893.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=121bp MVRVFGGKNSRASQRALRWMEERGVSYRFFDLDAARIDARLLDAWFDTFGback to top mRNA from alignment at P-wetherbeei_contig17893:119..481+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig17893.1.1 ID=mRNA_P-wetherbeei_contig17893.1.1|Name=mRNA_P-wetherbeei_contig17893.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=363bp|location=Sequence derived from alignment at P-wetherbeei_contig17893:119..481+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig17893:119..481+ >mRNA_P-wetherbeei_contig17893.1.1 ID=mRNA_P-wetherbeei_contig17893.1.1|Name=mRNA_P-wetherbeei_contig17893.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=363bp|location=Sequence derived from alignment at P-wetherbeei_contig17893:119..481+ (Phaeothamnion wetherbeei SAG_119_79)back to top |