mRNA_P-wetherbeei_contig1789.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1789.1.1
Unique NamemRNA_P-wetherbeei_contig1789.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1789.1.1 vs. uniprot
Match: F0Y179_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y179_AURAN)

HSP 1 Score: 179 bits (455), Expect = 2.050e-49
Identity = 90/184 (48.91%), Postives = 117/184 (63.59%), Query Frame = 1
Query:    4 PKNVMRLTGAFSMGVIHDWIAGCLPGVPPKTQEEAAVLH---FVNVFTRSVLTCEYRRGEAVVSSDSISAIAIVKEAFSREATARRIAISDTLQTNEDSIAHFIGLIHPKLQEQSLLARQVQLVAATTEIAGNDPDAPWLSEEYSHIVKNAKGIQKAFVERPRVLEYLTGIVTDIFVDWHKLKG 546
            PKNV+RL G FS   IHDW+ GCLP VPP+TQ    + H   F NV+T  VL C+Y  G A + SDSISAI I+KE  SREA   R+ + DT+  +E ++AHF+ L+HPKL  Q  LA QV L+ A  EI  ++ D  WLSE+Y  I  +A+ ++  F E P  L+Y+ GI+TD FVD  K  G
Sbjct:  539 PKNVLRLEGRFSAQQIHDWLGGCLPEVPPRTQPREVMAHRMCFRNVYTAGVLECDYEAGRARICSDSISAITILKEHISREAVRLRVEVHDTISIDEQTVAHFLALMHPKLDHQLKLAEQVLLIDAIKEIHSSEEDTRWLSEDYKFIHDHAEELRAEFAESPTSLQYMAGIITDFFVDRMKFCG 722          
BLAST of mRNA_P-wetherbeei_contig1789.1.1 vs. uniprot
Match: A0A835YQP2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQP2_9STRA)

HSP 1 Score: 177 bits (449), Expect = 3.220e-48
Identity = 95/206 (46.12%), Postives = 123/206 (59.71%), Query Frame = 1
Query:    4 PKNVMRLTGAFSMGVIHDWIAGCLPGVPPKTQEEAAVLHFVNVFTRSVLTCEYRRGEAVVSSDSISAIAIVKEAFSREATARRIAISDTLQTNEDSIAHFIGLIHPKLQEQSLLARQVQLVAATTEIAGND------PDAPWLSEEYSHIVKNAKGIQKA-------------------FVERPRVLEYLTGIVTDIFVDWHKLKG 546
            P N +RLTG F++GV+HDW+A CLPGVPP+ Q +   L F N FT SVLTC YR+GEAV  SDS SA+AI++EAF   A  RRI +S   Q    S+   + L+ PKL+    L+RQ  L+ A  E+A  +         PWLS EY++I+ NA  I+K                    F  RPR LEY+ GI+TD+FVDWHKL+G
Sbjct:  695 PMNELRLTGGFTLGVVHDWVAQCLPGVPPEAQSDTMNLKFRNAFTGSVLTCRYRKGEAVARSDSASALAILREAFETGAIQRRIHLSHNYQPCRASVPRMLDLLRPKLEALLALSRQHALINAIRELAQAEGXXXXXXSPPWLSPEYANILANATTIEKXXXXXXXXXMKKKARARVAEFKARPRALEYVGGIITDLFVDWHKLQG 900          
BLAST of mRNA_P-wetherbeei_contig1789.1.1 vs. uniprot
Match: D8LC08_ECTSI (Bardet-Biedl syndrome protein 7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC08_ECTSI)

HSP 1 Score: 173 bits (438), Expect = 3.530e-47
Identity = 90/185 (48.65%), Postives = 117/185 (63.24%), Query Frame = 1
Query:    1 RPKNVMRLTGAFSMGVIHDWIAGCLPGVPPKTQEEA--AVLHFVNVFTRSVLTCEYRRGEAVVSSDSISAIAIVKEAFSREATARRIAISDTLQTNEDSIAHFIGLIHPKLQEQSLLARQVQLVAATTEIAGNDPDAPWLSEEYSHIVKNAKGIQKAFVERPRVLEYLTGIVTDIFVDWHKLKGE 549
            RP N + L G F+M VIHDW+A CLP VPP+   EA  A L+F NVFT  +LT  YRRG AVVSSDS S +AIVKE  S+EAT+RR+ I+DT Q                          V+++ A  EI+  +P+ PW+ EEY + + NA+ IQK F  RPR LEY++GI+TD++VDWHK KG+
Sbjct:  525 RPMNALVLRGNFTMQVIHDWLAMCLPDVPPRISAEAEDATLNFENVFTGGILTASYRRGAAVVSSDSASTLAIVKELISKEATSRRVHITDTFQ--------------------------VEVMGALKEISMQEPETPWMFEEYRYTLDNAERIQKEFKGRPRALEYISGIITDLYVDWHKFKGD 683          
BLAST of mRNA_P-wetherbeei_contig1789.1.1 vs. uniprot
Match: UPI000BA82223 (Bardet-Biedl syndrome 7 protein homolog n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI000BA82223)

HSP 1 Score: 164 bits (415), Expect = 5.090e-46
Identity = 80/182 (43.96%), Postives = 124/182 (68.13%), Query Frame = 1
Query:    1 RPKNVMRLTGAFSMGVIHDWIAGCLPGVPPKTQEEAAVLHFVNVFTRSVLTCEYRRGEAVVSSDSISAIAIVKEAFSREATARRIAISDTLQTNEDSIAHFIGLIHPKLQEQSLLARQVQLVAATTEIAGNDPDAPWLSEEYSHIVKNAKGIQKAFVERPRVLEYLTGIVTDIFVDWHKLKG 546
            +P NV+ L GAFS+G +H WI  CLP VP KT  + A  +FV+ F  +VL+C Y++GEAV  SD+IS I+I+K+  ++EAT R+I +  +   ++ SI H + LIHPKL+EQ LLA++VQL+ A  ++  ++ D   L+ EY  I+ NA+ +Q+ F  +P  LE L G++TD+++D +K +G
Sbjct:  172 KPLNVLTLKGAFSVGEMHAWIVFCLPEVPDKTIGDTASFYFVSTFLDTVLSCSYKKGEAVFKSDNISTISILKDFLTKEATKRKIRLEISCDIDDSSIPHTLNLIHPKLEEQLLLAKKVQLIEALKDLQLHENDTSALTPEYQDILDNAEHLQREFKRQPCHLERLYGMITDLYIDVYKFQG 353          
BLAST of mRNA_P-wetherbeei_contig1789.1.1 vs. uniprot
Match: A0A7S1C5K1_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C5K1_9STRA)

HSP 1 Score: 170 bits (430), Expect = 5.150e-46
Identity = 84/182 (46.15%), Postives = 121/182 (66.48%), Query Frame = 1
Query:    1 RPKNVMRLTGAFSMGVIHDWIAGCLPGVPPKTQEEAAVLHFVNVFTRSVLTCEYRRGEAVVSSDSISAIAIVKEAFSREATARRIAISDTLQTNEDSIAHFIGLIHPKLQEQSLLARQVQLVAATTEIAGNDPDAPWLSEEYSHIVKNAKGIQKAFVERPRVLEYLTGIVTDIFVDWHKLKG 546
            RP N +RL GAF++G +H+W+A CLP VP +  E+   + F NVF  + L+  Y++GEAV  SDSIS IAI+KE  ++ ATAR++ +  + +  +++I HF+ LI PKL     LAR+V+LV A  EI   D +  +L+ EY  +++N + IQ+ F  RPR LE L G+VTD+FVD HK KG
Sbjct:  512 RPMNRLRLAGAFTLGQMHEWVANCLPDVPSRVMEDEVRMVFRNVFLGTQLSASYKKGEAVFLSDSISTIAILKEVITKAATARKVRVELSFEIKDETIPHFLRLIDPKLSYTLSLARKVELVEALREIKLADAEMTFLAPEYREVLENTEKIQREFKNRPRALEMLYGLVTDLFVDRHKFKG 693          
BLAST of mRNA_P-wetherbeei_contig1789.1.1 vs. uniprot
Match: UPI001B887627 (Bardet-Biedl syndrome 7 protein homolog isoform X1 n=2 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B887627)

HSP 1 Score: 168 bits (426), Expect = 1.720e-45
Identity = 80/184 (43.48%), Postives = 125/184 (67.93%), Query Frame = 1
Query:    1 RPKNVMRLTGAFSMGVIHDWIAGCLPGVPPKTQE-EAAVLHFVNVFTRSVLTCEYRRGEAVVSSDSISAIAIVKEAFSREATARRIAISDTLQTNEDSIAHFIGLIHPKLQEQSLLARQVQLVAATTEIAGNDPDAPWLSEEYSHIVKNAKGIQKAFVERPRVLEYLTGIVTDIFVDWHKLKGE 549
            RP N ++LTG+FS+  +H+W+  CLP +P +T   + A  HF + F  + L C YR+GEA   SD+IS I+I+K+  S+EAT ++I +  T + N+DS++H +GLIHP+L+ Q LLA++VQL+    E+A ++ D  +LS EY  I+ NA  IQ+ F ++P  LE L G++TD+++D  K KG+
Sbjct:  501 RPYNTLKLTGSFSLAEMHNWVCFCLPELPERTPAGDTATFHFESTFLNTQLECCYRKGEATFRSDNISTISILKDVLSKEATKKKIRLDITYEVNDDSVSHTLGLIHPRLESQLLLAKKVQLIDGLKELAIHENDTSFLSSEYQQILDNADKIQQEFKKQPCHLERLYGMITDLYIDKFKFKGQ 684          
BLAST of mRNA_P-wetherbeei_contig1789.1.1 vs. uniprot
Match: V4B2U3_LOTGI (Uncharacterized protein n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4B2U3_LOTGI)

HSP 1 Score: 164 bits (414), Expect = 8.310e-44
Identity = 78/184 (42.39%), Postives = 124/184 (67.39%), Query Frame = 1
Query:    1 RPKNVMRLTGAFSMGVIHDWIAGCLPGVPPKTQE-EAAVLHFVNVFTRSVLTCEYRRGEAVVSSDSISAIAIVKEAFSREATARRIAISDTLQTNEDSIAHFIGLIHPKLQEQSLLARQVQLVAATTEIAGNDPDAPWLSEEYSHIVKNAKGIQKAFVERPRVLEYLTGIVTDIFVDWHKLKGE 549
            RP N ++LTG FS+  +H+W+  CLP +P ++   ++ V +F++ F  + L C YR+GEA+  SD+IS I+I+K+  S+EAT ++I +      NEDSI H +GLIHPKL+ Q LLA++VQL+ A  E+  ++ D  +LS EY  I++ A  +Q  + ++P  LE L G++TD+F+D +K KG+
Sbjct:  501 RPCNTLKLTGQFSLAEMHNWVCFCLPELPDRSPAGDSVVFYFISTFLDTQLQCSYRKGEAIFKSDNISTISILKDVLSKEATKKKIRLDINYDINEDSIPHTLGLIHPKLEYQLLLAKKVQLIDALKELQVHENDTSFLSPEYQQILEEADSLQIEYKKQPCHLERLYGMITDLFIDKYKFKGQ 684          
BLAST of mRNA_P-wetherbeei_contig1789.1.1 vs. uniprot
Match: UPI001EE4F1CB (Bardet-Biedl syndrome 7 protein homolog isoform X2 n=5 Tax=Haliotis TaxID=6452 RepID=UPI001EE4F1CB)

HSP 1 Score: 163 bits (412), Expect = 1.600e-43
Identity = 80/184 (43.48%), Postives = 120/184 (65.22%), Query Frame = 1
Query:    1 RPKNVMRLTGAFSMGVIHDWIAGCLPGVPPKTQE-EAAVLHFVNVFTRSVLTCEYRRGEAVVSSDSISAIAIVKEAFSREATARRIAISDTLQTNEDSIAHFIGLIHPKLQEQSLLARQVQLVAATTEIAGNDPDAPWLSEEYSHIVKNAKGIQKAFVERPRVLEYLTGIVTDIFVDWHKLKGE 549
            RP N + LTG FS+  IH W+  CLP +P +T   +    HF++ F  + L C YR+GEAV  SD+IS I+I+K+  S+EAT ++I +  T   N++SI H + LIHP+L+ Q LLA++VQLV A  E+A ++ D  +LS EY  I+K A  +Q  + ++P  LE L G++TD+++D  K KG+
Sbjct:  501 RPHNSLTLTGQFSLAEIHSWVCFCLPELPDRTPAGDNVTFHFISTFLSTQLECSYRKGEAVFRSDNISTISILKDVLSKEATKKKIRLDITYDVNDESIPHTLSLIHPRLEHQLLLAKKVQLVDALKELAVHESDTSFLSAEYQQILKEADQLQIEYKKQPCHLERLYGMITDLYIDKFKFKGQ 684          
BLAST of mRNA_P-wetherbeei_contig1789.1.1 vs. uniprot
Match: A0A2C9JHH1_BIOGL (Uncharacterized protein n=2 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9JHH1_BIOGL)

HSP 1 Score: 160 bits (406), Expect = 1.090e-42
Identity = 76/184 (41.30%), Postives = 120/184 (65.22%), Query Frame = 1
Query:    1 RPKNVMRLTGAFSMGVIHDWIAGCLPGVPPKTQE-EAAVLHFVNVFTRSVLTCEYRRGEAVVSSDSISAIAIVKEAFSREATARRIAISDTLQTNEDSIAHFIGLIHPKLQEQSLLARQVQLVAATTEIAGNDPDAPWLSEEYSHIVKNAKGIQKAFVERPRVLEYLTGIVTDIFVDWHKLKGE 549
            RP N + L G FS   +H W+  CLP +P +    + AV +F + F  + L C YR+GEAV  SD+IS+I+I+K+  S+EAT ++I +  +   N+DS+ H + LIHPKL+EQ LLA++VQL+ A  E+  N+PD  +++ EY  I+K ++ ++  F  +P  LE L G++TD+++D  K KG+
Sbjct:  501 RPHNTLTLKGQFSQAEVHSWLTFCLPEIPERPPAMDPAVFYFASTFLDTQLLCLYRKGEAVFKSDNISSISILKDVLSKEATKKKIRLDISFDINDDSVTHTLRLIHPKLEEQLLLAKKVQLIDALKELQVNEPDLSFMAPEYQEILKESEKLKAEFKRQPSHLERLYGMITDLYIDKFKFKGQ 684          
BLAST of mRNA_P-wetherbeei_contig1789.1.1 vs. uniprot
Match: A0A1S3JU34_LINUN (Bardet-Biedl syndrome 7 protein homolog n=5 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3JU34_LINUN)

HSP 1 Score: 159 bits (402), Expect = 4.060e-42
Identity = 74/184 (40.22%), Postives = 124/184 (67.39%), Query Frame = 1
Query:    1 RPKNVMRLTGAFSMGVIHDWIAGCLPGVPPKTQE-EAAVLHFVNVFTRSVLTCEYRRGEAVVSSDSISAIAIVKEAFSREATARRIAISDTLQTNEDSIAHFIGLIHPKLQEQSLLARQVQLVAATTEIAGNDPDAPWLSEEYSHIVKNAKGIQKAFVERPRVLEYLTGIVTDIFVDWHKLKGE 549
            RP   ++L G FS+  IH W+  CLP +P +T   + AV HFV+ F  + L C+Y++GE +  SD+IS I+I+K+  ++EAT ++I +  +   NE+S+AH + LIHPKL+ Q +LA++VQ++ A  E+  ++ D  +LS EY  I+++A+ +Q+ + ++P  LE L G++TD+F+D  K KG+
Sbjct:  506 RPNCSLKLMGNFSLAEIHSWVTFCLPELPERTPAGDTAVFHFVSTFLDTQLMCQYKKGEGLFKSDNISTISILKDVLTKEATKKKIRLDISYDINEESVAHLLNLIHPKLEYQLVLAKKVQIIDALKELQVHESDTSFLSAEYQQILQDAEKLQEEYKKQPCCLERLYGMITDLFIDKFKFKGQ 689          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1789.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
F0Y179_AURAN2.050e-4948.91Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A835YQP2_9STRA3.220e-4846.12Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LC08_ECTSI3.530e-4748.65Bardet-Biedl syndrome protein 7 n=1 Tax=Ectocarpus... [more]
UPI000BA822235.090e-4643.96Bardet-Biedl syndrome 7 protein homolog n=1 Tax=Li... [more]
A0A7S1C5K1_9STRA5.150e-4646.15Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
UPI001B8876271.720e-4543.48Bardet-Biedl syndrome 7 protein homolog isoform X1... [more]
V4B2U3_LOTGI8.310e-4442.39Uncharacterized protein n=1 Tax=Lottia gigantea Ta... [more]
UPI001EE4F1CB1.600e-4343.48Bardet-Biedl syndrome 7 protein homolog isoform X2... [more]
A0A2C9JHH1_BIOGL1.090e-4241.30Uncharacterized protein n=2 Tax=Biomphalaria glabr... [more]
A0A1S3JU34_LINUN4.060e-4240.22Bardet-Biedl syndrome 7 protein homolog n=5 Tax=Li... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1789contigP-wetherbeei_contig1789:3055..4759 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog44056.XP_009034546.1
Preferred nameBBS7
Model size549
Max annot lvl2759|Eukaryota
KEGG koko:K16749
Hectar predicted targeting categoryother localisation
GOsGO:0001085,GO:0001103,GO:0001654,GO:0001750,GO:0001947,GO:0002009,GO:0003007,GO:0003143,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0005929,GO:0005930,GO:0006355,GO:0006357,GO:0006810,GO:0006928,GO:0006935,GO:0006996,GO:0007017,GO:0007018,GO:0007154,GO:0007165,GO:0007166,GO:0007224,GO:0007275,GO:0007368,GO:0007389,GO:0007399,GO:0007417,GO:0007420,GO:0007423,GO:0007507,GO:0008104,GO:0008134,GO:0008150,GO:0009605,GO:0009653,GO:0009790,GO:0009799,GO:0009855,GO:0009887,GO:0009888,GO:0009889,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010468,GO:0010556,GO:0010604,GO:0010970,GO:0015630,GO:0016020,GO:0016043,GO:0019219,GO:0019222,GO:0022607,GO:0023052,GO:0030030,GO:0030031,GO:0030154,GO:0030162,GO:0030705,GO:0031323,GO:0031325,GO:0031326,GO:0031329,GO:0031331,GO:0031503,GO:0032268,GO:0032270,GO:0032400,GO:0032401,GO:0032402,GO:0032434,GO:0032436,GO:0032501,GO:0032502,GO:0032838,GO:0032991,GO:0033036,GO:0033059,GO:0034464,GO:0034613,GO:0035050,GO:0035239,GO:0035295,GO:0036064,GO:0040011,GO:0042073,GO:0042176,GO:0042221,GO:0042330,GO:0042995,GO:0043005,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043473,GO:0044085,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0044782,GO:0045444,GO:0045732,GO:0045862,GO:0046907,GO:0048513,GO:0048518,GO:0048522,GO:0048546,GO:0048562,GO:0048565,GO:0048568,GO:0048598,GO:0048729,GO:0048731,GO:0048736,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051246,GO:0051247,GO:0051252,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051716,GO:0051875,GO:0051877,GO:0051904,GO:0051905,GO:0055123,GO:0060021,GO:0060173,GO:0060255,GO:0060271,GO:0060322,GO:0060429,GO:0060562,GO:0061136,GO:0061371,GO:0065007,GO:0070491,GO:0070727,GO:0070925,GO:0071840,GO:0072359,GO:0072657,GO:0080090,GO:0097014,GO:0097458,GO:0097730,GO:0097731,GO:0097733,GO:0099111,GO:0099568,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:1901800,GO:1903050,GO:1903052,GO:1903362,GO:1903364,GO:1903506,GO:1903929,GO:1904106,GO:1904107,GO:1905515,GO:1990778,GO:2000058,GO:2000060,GO:2000112,GO:2001141
Exons5
Evalue2.45e-47
EggNOG OGs2C3IK@1|root,2QPS5@2759|Eukaryota
Ec32 ortholog descriptionBardet-Biedl syndrome protein 7
Ec32 orthologEc-20_004000.1
Descriptionprimary palate development
Cds size534
COG categoryS
BRITEko00000,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1789.1.1prot_P-wetherbeei_contig1789.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1789 3070..4759 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186129.9703903-UTR-P-wetherbeei_contig1789:3054..30691683186129.9703903-UTR-P-wetherbeei_contig1789:3054..3069Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1789 3055..3069 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186129.9801536-CDS-P-wetherbeei_contig1789:3069..31471683186129.9801536-CDS-P-wetherbeei_contig1789:3069..3147Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1789 3070..3147 +
1683186129.9900186-CDS-P-wetherbeei_contig1789:3465..35941683186129.9900186-CDS-P-wetherbeei_contig1789:3465..3594Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1789 3466..3594 +
1683186130.0024035-CDS-P-wetherbeei_contig1789:3873..39871683186130.0024035-CDS-P-wetherbeei_contig1789:3873..3987Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1789 3874..3987 +
1683186130.0127246-CDS-P-wetherbeei_contig1789:4284..44101683186130.0127246-CDS-P-wetherbeei_contig1789:4284..4410Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1789 4285..4410 +
1683186130.0219915-CDS-P-wetherbeei_contig1789:4672..47591683186130.0219915-CDS-P-wetherbeei_contig1789:4672..4759Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1789 4673..4759 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1789.1.1

>prot_P-wetherbeei_contig1789.1.1 ID=prot_P-wetherbeei_contig1789.1.1|Name=mRNA_P-wetherbeei_contig1789.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=178bp
MRLTGAFSMGVIHDWIAGCLPGVPPKTQEEAAVLHFVNVFTRSVLTCEYR
RGEAVVSSDSISAIAIVKEAFSREATARRIAISDTLQTNEDSIAHFIGLI
HPKLQEQSLLARQVQLVAATTEIAGNDPDAPWLSEEYSHIVKNAKGIQKA
FVERPRVLEYLTGIVTDIFVDWHKLKGE
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mRNA from alignment at P-wetherbeei_contig1789:3055..4759+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1789.1.1 ID=mRNA_P-wetherbeei_contig1789.1.1|Name=mRNA_P-wetherbeei_contig1789.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1705bp|location=Sequence derived from alignment at P-wetherbeei_contig1789:3055..4759+ (Phaeothamnion wetherbeei SAG_119_79)
CGGCCAAAGAACGTGATGCGGCTGACCGGCGCCTTCAGCATGGGCGTCAT CCACGACTGGATCGCCGGCTGCCTGCCCGGCGTGCCTCCCAAGGTGAGCG ATGGGCGGGCGCTTGACACGGGCGGCCGGCAGCTTTTCTTGTTTTCCGTT AGTTGTGTGCTGCGGTTGGCGGATGACTGCTGGCTCTGGTTACCTCGCAT TAGCACATCAACGCCGATGTACGCATGAGAGGCATGACATGCCGTCCACC AGTGGTAGCACGAGGTGATGCTTAGCCGCCTGCCACCGTCACAGCTACCG GTTTCCTGTCACTGTGAGGTGCTGTGAGTTTGAGGTTCTTTCTTTTCTCC GTTTTTCTTTCGATTTGCTACCGGCGACGATGACGACGCCTCTTGCCAAC TGCTGCCGCAGACGCAGGAGGAGGCGGCGGTGCTGCACTTCGTCAACGTC TTCACGCGGTCCGTGCTGACCTGCGAATACCGCAGGGGCGAGGCCGTCGT CTCCTCCGACAGCATCAGCGCCATCGCCATCGTCAAGGAGGTGCGGGGTT AAACGGAGGGAAGGAAGAAAGTAGAAACAGACGGATGGAAGCCTGCTGCC ACTGTCGCCGGGTTTAGCGATTGTGCATTTCTCAGGCAGGAGGCTGTCTC AGTGTCCCTCCTGGCAGCCCGCTTCTGCTCTTTTCCGTGGCGGGTGGCGT TGGGCGCCAGAAAGGCATTGGAGAAGGTTGCTTGGCGGAACGCCGCATGT TCTGATTTTTTGCCTCGTCCCGCTGCGGCATGGCGCTTTTGATCTCGCTC TTGAGTCGCCGGTCGGCAGGCGTTCAGCCGCGAGGCGACGGCTCGGCGGA TCGCCATAAGCGACACGCTGCAGACAAACGAGGACAGCATCGCCCACTTT ATCGGGCTTATACACCCCAAGCTGCAGGAGCAGGTAAGGCGGTAGGATTG AAATGGTTTCATGGTTGCAGGGGAGAGACCTTGTGCTTTCCTCGAATCGC CATGGCCGGAGGTTTTGGAAATTTATATTGGGGAGAATGGAAGCCGTTTT TTCGATGTTTCAGCCAATGACTCATTATGCCGTCCCCCGGTTCGTGTGGC CACAGCAATATGCGGAAAGCCCGTTTTGCTCTGTAAGAAATCCGAGCGAC TCCTCGTGCCTGGAAACATTATGGTTCCAACCCAGCGTCCGTCTCACCTT GGCTACTGATCCTCCGCTGCCCGCCCGCAGTCGCTGCTGGCGAGGCAGGT GCAGTTGGTTGCGGCGACGACGGAGATCGCGGGGAACGACCCCGACGCCC CGTGGCTGTCGGAGGAGTATTCCCACATCGTCAAGAACGCCAAGGGGATC CAGAAGGTGGGCAGAGTAACAGAGAACGGAATTGTAAACGGATCCAACGA TGGTTCTCCAACGGGCATTCTTGCTTATTGCTAGCCATGATCGAGGACAT AGCTTTTCAGACAATCTGGTTCTGTCCTTTCGCGCGCTGGCTGGAATGCT GCGCATGCGAACCTCTAGAGCGAATGAGTATTCGTCTGCCTGCCGCTAGG ATTCTTTCAACCGTGCCACCGTTCACGAACGGGTCCGACTGTTTTTGACT GTCTGTTTGCCGTTGCAGGCGTTTGTGGAGAGACCGCGGGTGCTCGAGTA CCTGACGGGCATTGTCACCGACATCTTCGTCGATTGGCACAAACTCAAGG GTGAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1789:3055..4759+

>mRNA_P-wetherbeei_contig1789.1.1 ID=mRNA_P-wetherbeei_contig1789.1.1|Name=mRNA_P-wetherbeei_contig1789.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=534bp|location=Sequence derived from alignment at P-wetherbeei_contig1789:3055..4759+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCGGCTGACCGGCGCCTTCAGCATGGGCGTCATCCACGACTGGATCGC
CGGCTGCCTGCCCGGCGTGCCTCCCAAGACGCAGGAGGAGGCGGCGGTGC
TGCACTTCGTCAACGTCTTCACGCGGTCCGTGCTGACCTGCGAATACCGC
AGGGGCGAGGCCGTCGTCTCCTCCGACAGCATCAGCGCCATCGCCATCGT
CAAGGAGGCGTTCAGCCGCGAGGCGACGGCTCGGCGGATCGCCATAAGCG
ACACGCTGCAGACAAACGAGGACAGCATCGCCCACTTTATCGGGCTTATA
CACCCCAAGCTGCAGGAGCAGTCGCTGCTGGCGAGGCAGGTGCAGTTGGT
TGCGGCGACGACGGAGATCGCGGGGAACGACCCCGACGCCCCGTGGCTGT
CGGAGGAGTATTCCCACATCGTCAAGAACGCCAAGGGGATCCAGAAGGCG
TTTGTGGAGAGACCGCGGGTGCTCGAGTACCTGACGGGCATTGTCACCGA
CATCTTCGTCGATTGGCACAAACTCAAGGGTGAG
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